| TF name | Position | PWM scan score |
| PhoB | 195-214 | 9.409 |
| CRP | 196-217 | 9.213 |
| NtrC | 346-362 | 9.168 |
| ArgR | 207-222 | 8.265 |
| MalT | 368-377 | 7.671 |
| GlpR | 18-37 | 7.428 |
| TorR | 189-198 | 7.359 |
| H-NS | 204-218 | 7.285 |
| Nac | 57-71 | 7.257 |
| SoxS | 181-198 | 7.109 |
| IHF | 72-84 | 6.955 |
| CueR | 17-35 | 6.710 |
| NarP | 364-370 | 6.488 |
| ModE | 295-321 | 6.419 |
| RcsB | 200-213 | 6.388 |
| FruR | 271-288 | 6.366 |
| MarA | 140-160 | 6.332 |
| DeoR | 209-224 | 6.309 |
| RhaS | 59-75 | 6.268 |
| DnaA | 221-229 | 6.262 |
| Rob | 64-84 | 6.253 |
| AraC | 205-222 | 6.249 |
| LexA | 323-342 | 6.048 |
| UlaR | 57-76 | 5.986 |
| XylR | 348-365 | 5.955 |
| TyrR | 207-228 | 5.637 |
| GntR | 114-133 | 5.635 |
| FNR | 270-291 | 5.578 |
| OmpR | 114-133 | 5.403 |
| NorR | 216-232 | 5.391 |
| NarL | 204-210 | 5.119 |
| MetR | 353-376 | 5.015 |