| TF name | Position | PWM scan score |
| GcvA | 323-351 | 13.666 |
| OxyR | 222-266 | 11.016 |
| XylR | 13-30 | 9.388 |
| NorR | 323-339 | 8.787 |
| Nac | 246-260 | 8.712 |
| PhoP | 258-274 | 8.343 |
| PurR | 110-125 | 8.337 |
| H-NS | 329-343 | 8.299 |
| Rob | 112-132 | 8.013 |
| RcsB | 327-340 | 7.208 |
| NagC | 327-349 | 7.151 |
| NarL | 255-261 | 7.107 |
| MetJ | 306-313 | 7.013 |
| SoxS | 259-276 | 6.954 |
| PhoB | 316-335 | 6.897 |
| TyrR | 320-341 | 6.891 |
| IHF | 244-256 | 6.728 |
| ArgP | 325-337 | 6.658 |
| CRP | 321-342 | 6.626 |
| Lrp | 262-273 | 6.495 |
| AraC | 304-321 | 6.473 |
| MarA | 257-277 | 6.303 |
| ModE | 182-208 | 6.281 |
| FNR | 324-345 | 6.110 |
| FruR | 110-127 | 6.102 |
| MetR | 217-240 | 5.829 |
| DeoR | 80-95 | 5.571 |
| UxuR | 172-189 | 5.476 |
| AgaR | 365-388 | 5.319 |
| GadE | 260-279 | 5.207 |