| TF name | Position | PWM scan score |
| Lrp | 259-270 | 9.530 |
| RhaS | 158-174 | 9.521 |
| MalT | 6-15 | 8.672 |
| IHF | 31-43 | 8.279 |
| SoxS | 239-256 | 7.423 |
| GalS | 228-243 | 7.421 |
| GalR | 228-243 | 7.421 |
| DeoR | 202-217 | 7.412 |
| MelR | 70-87 | 7.142 |
| PurR | 159-174 | 6.598 |
| NorR | 72-88 | 6.255 |
| Nac | 48-62 | 6.212 |
| CRP | 19-40 | 6.046 |
| RcsB | 50-63 | 6.015 |
| TyrR | 69-90 | 5.813 |
| NarP | 344-350 | 5.698 |
| DnaA | 264-272 | 5.696 |
| AraC | 71-88 | 5.592 |
| NarL | 57-63 | 5.551 |
| NtrC | 172-188 | 5.522 |
| FNR | 368-389 | 5.305 |
| DcuR | 10-64 | 5.235 |