| TF name | Position | PWM scan score |
| AgaR | 294-317 | 13.274 |
| Rob | 83-103 | 11.790 |
| SoxS | 107-124 | 9.984 |
| FNR | 14-35 | 9.935 |
| Nac | 185-199 | 9.603 |
| IHF | 120-132 | 9.178 |
| H-NS | 76-90 | 8.925 |
| UlaR | 247-266 | 8.328 |
| GntR | 18-37 | 7.942 |
| ArgP | 115-127 | 7.878 |
| PhoB | 378-397 | 7.777 |
| NarP | 132-138 | 7.377 |
| Ada | 267-294 | 7.371 |
| MelR | 150-167 | 7.329 |
| NarL | 298-304 | 7.310 |
| PhoP | 118-134 | 6.980 |
| Fis | 189-209 | 6.970 |
| GadE | 376-395 | 6.954 |
| XylR | 279-296 | 6.910 |
| AraC | 113-130 | 6.774 |
| ArcA | 43-103 | 6.603 |
| MetJ | 11-18 | 6.390 |
| TyrR | 118-139 | 6.230 |
| CueR | 304-322 | 6.214 |
| CRP | 377-398 | 6.210 |
| GlpR | 13-32 | 6.048 |
| ModE | 241-267 | 6.006 |
| Lrp | 8-19 | 5.973 |
| IdnR | 189-204 | 5.964 |
| DeoR | 332-347 | 5.906 |
| LacI | 329-349 | 5.813 |
| TrpR | 17-34 | 5.602 |