| TF name | Position | PWM scan score |
| MarA | 5-25 | 12.228 |
| GadE | 369-388 | 10.852 |
| LexA | 130-149 | 10.473 |
| GntR | 259-278 | 10.252 |
| Fis | 97-117 | 9.434 |
| GlpR | 378-397 | 9.134 |
| H-NS | 105-119 | 9.098 |
| MalT | 264-273 | 8.947 |
| FadR | 221-237 | 8.170 |
| IHF | 207-219 | 8.138 |
| Rob | 364-384 | 8.132 |
| Lrp | 209-220 | 7.673 |
| MetJ | 246-253 | 7.548 |
| TorR | 115-124 | 7.438 |
| ModE | 92-118 | 7.049 |
| ArcA | 333-393 | 6.957 |
| UxuR | 201-218 | 6.940 |
| ArgR | 116-131 | 6.936 |
| NarP | 215-221 | 6.524 |
| CytR | 117-156 | 5.991 |
| Nac | 380-394 | 5.859 |
| ArgP | 380-392 | 5.690 |
| NarL | 269-275 | 5.578 |
| RcsB | 376-389 | 5.576 |
| PhoB | 180-199 | 5.440 |
| NorR | 45-61 | 5.233 |
| OmpR | 362-381 | 5.179 |
| Fur | 373-387 | 5.011 |