| TF name | Position | PWM scan score |
| UlaR | 157-176 | 9.310 |
| CpxR | 380-394 | 9.150 |
| DnaA | 320-328 | 8.482 |
| LexA | 318-337 | 7.833 |
| GntR | 132-151 | 7.618 |
| GalR | 53-68 | 7.287 |
| GalS | 53-68 | 7.287 |
| MelR | 369-386 | 6.347 |
| FadR | 296-312 | 6.173 |
| MetJ | 157-164 | 5.973 |
| DeoR | 320-335 | 5.855 |
| Mlc | 377-399 | 5.817 |
| RhaS | 251-267 | 5.769 |
| XylR | 77-94 | 5.714 |
| SoxS | 341-358 | 5.534 |
| MalT | 62-71 | 5.520 |
| NarL | 356-362 | 5.405 |
| LacI | 135-155 | 5.227 |