| TF name | Position | PWM scan score |
| GalR | 131-146 | 13.091 |
| GalS | 131-146 | 13.091 |
| TorR | 334-343 | 10.199 |
| Ada | 244-271 | 9.922 |
| LacI | 224-244 | 9.424 |
| MalT | 156-165 | 8.783 |
| MarA | 183-203 | 7.407 |
| MelR | 146-163 | 7.077 |
| RcsB | 256-269 | 6.903 |
| RhaS | 238-254 | 6.755 |
| SoxS | 185-202 | 6.518 |
| Lrp | 106-117 | 6.369 |
| NarL | 296-302 | 6.169 |
| MetJ | 127-134 | 6.074 |
| CpxR | 338-352 | 5.646 |
| NagC | 259-281 | 5.329 |
| CueR | 207-225 | 5.105 |
| NarP | 341-347 | 5.023 |