| TF name | Position | PWM scan score |
| GlpR | 34-53 | 11.715 |
| MalT | 178-187 | 10.259 |
| PspF | 90-106 | 10.160 |
| ArgP | 380-392 | 9.731 |
| MarA | 110-130 | 9.366 |
| PurR | 161-176 | 8.954 |
| H-NS | 144-158 | 8.609 |
| Fis | 371-391 | 8.239 |
| MelR | 122-139 | 8.050 |
| TorR | 79-88 | 7.914 |
| GntR | 227-246 | 7.247 |
| Fur | 93-107 | 7.196 |
| FadR | 225-241 | 7.142 |
| MetJ | 259-266 | 7.120 |
| NarL | 237-243 | 6.907 |
| RcsB | 91-104 | 6.494 |
| FNR | 202-223 | 6.169 |
| Nac | 303-317 | 5.839 |
| Lrp | 41-52 | 5.797 |
| NorR | 228-244 | 5.710 |
| UxuR | 222-239 | 5.543 |
| IHF | 181-193 | 5.401 |
| CytR | 78-117 | 5.273 |
| DeoR | 234-249 | 5.230 |
| OmpR | 377-396 | 5.033 |