| TF name | Position | PWM scan score |
| OxyR | 257-301 | 16.268 |
| Rob | 215-235 | 11.836 |
| FadR | 336-352 | 11.422 |
| PhoB | 253-272 | 10.646 |
| Lrp | 125-136 | 9.291 |
| DnaA | 79-87 | 8.868 |
| NagC | 26-48 | 8.679 |
| MalT | 133-142 | 8.508 |
| H-NS | 384-398 | 8.215 |
| MarA | 251-271 | 8.109 |
| ArgR | 382-397 | 7.678 |
| PurR | 155-170 | 7.678 |
| IHF | 337-349 | 7.617 |
| Nac | 121-135 | 7.507 |
| OmpR | 143-162 | 7.201 |
| DeoR | 269-284 | 7.066 |
| SoxS | 286-303 | 6.603 |
| RhaS | 29-45 | 6.422 |
| TorR | 76-85 | 6.058 |
| IdnR | 258-273 | 6.010 |
| Fis | 353-373 | 5.898 |
| RcsB | 38-51 | 5.832 |
| PhoP | 153-169 | 5.034 |