| TF name | Position | PWM scan score |
| ArgR | 107-122 | 14.896 |
| IHF | 111-123 | 11.953 |
| OxyR | 139-183 | 11.494 |
| PurR | 48-63 | 9.656 |
| Fis | 101-121 | 9.639 |
| PspF | 119-135 | 9.544 |
| PhoP | 34-50 | 9.486 |
| TorR | 85-94 | 9.471 |
| MetJ | 6-13 | 9.336 |
| PhoB | 355-374 | 9.270 |
| TyrR | 84-105 | 9.132 |
| SoxS | 30-47 | 8.877 |
| MarA | 104-124 | 8.666 |
| LexA | 86-105 | 8.581 |
| GadE | 38-57 | 7.948 |
| Lrp | 17-28 | 7.921 |
| AraC | 166-183 | 7.197 |
| DnaA | 22-30 | 7.095 |
| H-NS | 109-123 | 6.849 |
| NarL | 19-25 | 6.718 |
| DeoR | 360-375 | 6.376 |
| NarP | 6-12 | 5.698 |
| Nac | 118-132 | 5.524 |
| AgaR | 317-340 | 5.109 |