| TF name | Position | PWM scan score |
| NorR | 15-31 | 11.251 |
| Nac | 161-175 | 11.203 |
| RcsB | 83-96 | 11.150 |
| FadR | 289-305 | 10.691 |
| Rob | 286-306 | 9.984 |
| NarL | 164-170 | 8.755 |
| GadE | 90-109 | 8.193 |
| Ada | 140-167 | 8.041 |
| RhaS | 35-51 | 7.989 |
| IHF | 12-24 | 7.261 |
| UlaR | 149-168 | 6.814 |
| LexA | 2-21 | 6.750 |
| FNR | 103-124 | 6.633 |
| MetJ | 66-73 | 6.235 |
| GlpR | 192-211 | 5.856 |
| Lrp | 304-315 | 5.839 |
| AraC | 74-91 | 5.791 |
| TorR | 213-222 | 5.665 |
| ArgR | 76-91 | 5.655 |
| GalS | 95-110 | 5.446 |
| GalR | 95-110 | 5.446 |
| Fis | 2-22 | 5.376 |
| CRP | 277-298 | 5.226 |
| SoxS | 75-92 | 5.114 |