| TF name | Position | PWM scan score |
| GlpR | 83-102 | 11.659 |
| CpxR | 71-85 | 8.023 |
| GalS | 197-212 | 8.010 |
| GalR | 197-212 | 8.010 |
| NarP | 364-370 | 7.885 |
| TyrR | 132-153 | 7.798 |
| GntR | 198-217 | 7.674 |
| MalT | 318-327 | 7.518 |
| DnaA | 205-213 | 7.376 |
| Lrp | 66-77 | 7.207 |
| MarA | 94-114 | 7.145 |
| H-NS | 93-107 | 6.695 |
| PurR | 197-212 | 6.576 |
| PhoB | 135-154 | 6.524 |
| PhoP | 373-389 | 6.475 |
| TorR | 206-215 | 6.143 |
| DeoR | 35-50 | 6.038 |
| UxuR | 345-362 | 6.030 |
| RhaS | 24-40 | 5.778 |
| Fis | 109-129 | 5.496 |
| IdnR | 167-182 | 5.390 |
| Nac | 205-219 | 5.287 |
| SoxS | 129-146 | 5.258 |