| TF name | Position | PWM scan score |
| MetJ | 267-274 | 11.953 |
| TyrR | 353-374 | 8.937 |
| OxyR | 301-345 | 8.785 |
| FadR | 365-381 | 8.056 |
| MetR | 340-363 | 7.729 |
| MalT | 63-72 | 6.668 |
| NorR | 290-306 | 6.550 |
| GntR | 267-286 | 6.403 |
| CueR | 1-19 | 6.362 |
| FruR | 302-319 | 6.264 |
| FhlA | 304-343 | 6.138 |
| NarL | 34-40 | 5.802 |
| Fis | 297-317 | 5.734 |
| PurR | 323-338 | 5.676 |
| AraC | 289-306 | 5.454 |
| TorR | 63-72 | 5.301 |
| CpxR | 289-303 | 5.156 |
| NarP | 70-76 | 5.094 |
| XylR | 331-348 | 5.092 |