| TF name | Position | PWM scan score |
| UlaR | 336-355 | 10.511 |
| UxuR | 12-29 | 9.653 |
| NarP | 252-258 | 8.982 |
| TorR | 152-161 | 8.900 |
| RhaS | 237-253 | 8.793 |
| CRP | 60-81 | 8.421 |
| Fis | 266-286 | 8.374 |
| MalT | 177-186 | 8.361 |
| IHF | 153-165 | 8.229 |
| FNR | 330-351 | 7.096 |
| RcsB | 55-68 | 6.953 |
| DnaA | 314-322 | 6.944 |
| MetJ | 384-391 | 6.925 |
| Lrp | 339-350 | 6.917 |
| AraC | 19-36 | 6.814 |
| ArgP | 272-284 | 6.411 |
| NarL | 37-43 | 6.305 |
| CpxR | 156-170 | 5.551 |
| PhoP | 52-68 | 5.533 |
| Nac | 254-268 | 5.456 |
| FruR | 262-279 | 5.127 |