| TF name | Position | PWM scan score |
| FadR | 375-391 | 12.479 |
| ArcA | 281-341 | 10.398 |
| CysB | 338-379 | 9.834 |
| CRP | 368-389 | 9.003 |
| Fis | 297-317 | 8.902 |
| PhoP | 381-397 | 8.755 |
| PhoB | 201-220 | 8.638 |
| H-NS | 303-317 | 8.580 |
| Lrp | 175-186 | 8.181 |
| IHF | 268-280 | 8.097 |
| NarL | 206-212 | 8.006 |
| FNR | 107-128 | 7.642 |
| OmpR | 175-194 | 7.592 |
| Nac | 180-194 | 7.295 |
| DeoR | 89-104 | 7.269 |
| GntR | 144-163 | 7.257 |
| MetJ | 325-332 | 7.198 |
| RcsB | 176-189 | 7.134 |
| UxuR | 308-325 | 7.007 |
| NagC | 257-279 | 6.889 |
| ArgR | 12-27 | 6.180 |
| ArgP | 150-162 | 6.114 |
| IdnR | 340-355 | 6.014 |
| TorR | 220-229 | 5.759 |
| GcvA | 185-213 | 5.730 |
| DnaA | 94-102 | 5.459 |
| SoxS | 169-186 | 5.429 |
| MalT | 36-45 | 5.342 |
| AraC | 27-44 | 5.316 |
| GadE | 353-372 | 5.308 |
| LacI | 19-39 | 5.036 |