| TF name | Position | PWM scan score |
| Fur | 375-389 | 13.755 |
| UlaR | 132-151 | 11.939 |
| DeoR | 61-76 | 11.748 |
| CRP | 59-80 | 10.974 |
| TrpR | 158-175 | 10.280 |
| FNR | 368-389 | 9.839 |
| IHF | 375-387 | 9.765 |
| PhoB | 10-29 | 9.542 |
| PhoP | 362-378 | 9.384 |
| MalT | 288-297 | 9.378 |
| SoxS | 182-199 | 9.354 |
| OmpR | 367-386 | 9.219 |
| AraC | 309-326 | 9.035 |
| MarA | 180-200 | 8.955 |
| H-NS | 355-369 | 8.837 |
| RhaS | 299-315 | 8.706 |
| MelR | 372-389 | 8.095 |
| NorR | 22-38 | 8.026 |
| UxuR | 368-385 | 7.871 |
| Lrp | 380-391 | 7.582 |
| ArgR | 360-375 | 7.516 |
| CpxR | 349-363 | 7.448 |
| NtrC | 74-90 | 7.296 |
| RcsB | 378-391 | 7.145 |
| Nac | 373-387 | 7.067 |
| CysB | 354-395 | 6.787 |
| NarL | 183-189 | 6.560 |
| LacI | 289-309 | 6.344 |
| LexA | 354-373 | 6.288 |
| ArgP | 101-113 | 6.125 |
| NagC | 243-265 | 6.043 |
| Fis | 176-196 | 5.985 |
| MetJ | 195-202 | 5.812 |
| XylR | 364-381 | 5.803 |
| PurR | 156-171 | 5.634 |
| CytR | 129-168 | 5.590 |
| TyrR | 61-82 | 5.502 |
| TorR | 204-213 | 5.375 |
| FruR | 349-366 | 5.353 |
| Mlc | 58-80 | 5.259 |
| FadR | 196-212 | 5.025 |