| TF name | Position | PWM scan score |
| GntR | 376-395 | 13.465 |
| CytR | 226-265 | 11.240 |
| RhaS | 242-258 | 10.520 |
| PhoB | 197-216 | 10.421 |
| NarP | 279-285 | 9.705 |
| MetJ | 203-210 | 9.336 |
| DeoR | 135-150 | 8.807 |
| NtrC | 149-165 | 8.203 |
| Lrp | 194-205 | 7.921 |
| IHF | 197-209 | 7.469 |
| LexA | 347-366 | 7.250 |
| H-NS | 185-199 | 7.179 |
| MalT | 165-174 | 6.910 |
| GadE | 135-154 | 6.793 |
| Rob | 148-168 | 6.528 |
| CRP | 107-128 | 6.485 |
| ModE | 352-378 | 6.483 |
| NarL | 188-194 | 6.467 |
| RcsB | 123-136 | 6.396 |
| Fis | 179-199 | 6.382 |
| FNR | 136-157 | 6.179 |
| Nac | 295-309 | 6.052 |
| OmpR | 173-192 | 5.831 |
| TyrR | 232-253 | 5.721 |
| AraC | 373-390 | 5.719 |
| NorR | 291-307 | 5.540 |
| FadR | 259-275 | 5.009 |