| TF name | Position | PWM scan score |
| Nac | 107-121 | 12.319 |
| UlaR | 330-349 | 10.773 |
| Fis | 108-128 | 9.946 |
| RhaS | 145-161 | 9.516 |
| MalT | 190-199 | 8.453 |
| DnaA | 322-330 | 8.332 |
| FadR | 254-270 | 8.254 |
| NagC | 106-128 | 7.845 |
| GcvA | 371-399 | 7.654 |
| NorR | 303-319 | 7.628 |
| SoxS | 94-111 | 7.603 |
| IHF | 48-60 | 7.310 |
| Rob | 114-134 | 7.249 |
| FruR | 112-129 | 6.853 |
| FNR | 360-381 | 6.803 |
| ArgR | 45-60 | 6.734 |
| NarL | 117-123 | 6.678 |
| CpxR | 322-336 | 6.500 |
| MetJ | 324-331 | 6.240 |
| TorR | 198-207 | 6.115 |
| PhoB | 14-33 | 6.105 |
| GntR | 51-70 | 6.000 |
| RcsB | 165-178 | 5.832 |
| XylR | 382-399 | 5.732 |
| AraC | 275-292 | 5.292 |
| TyrR | 45-66 | 5.016 |