| TF name | Position | PWM scan score |
| Nac | 282-296 | 11.805 |
| GlpR | 154-173 | 10.170 |
| TorR | 172-181 | 9.978 |
| NarP | 320-326 | 8.877 |
| MetJ | 47-54 | 8.617 |
| Fis | 130-150 | 8.576 |
| OmpR | 378-397 | 8.346 |
| UlaR | 336-355 | 8.168 |
| PhoP | 142-158 | 7.708 |
| FadR | 168-184 | 7.478 |
| MarA | 379-399 | 7.038 |
| RhaS | 313-329 | 6.936 |
| MelR | 300-317 | 6.464 |
| CysB | 142-183 | 6.198 |
| PhoB | 366-385 | 6.172 |
| NorR | 182-198 | 6.164 |
| NarL | 198-204 | 6.131 |
| MalT | 187-196 | 5.597 |
| CRP | 237-258 | 5.488 |
| ArgP | 238-250 | 5.124 |