| TF name | Position | PWM scan score |
| UlaR | 369-388 | 13.339 |
| AgaR | 364-387 | 13.197 |
| IHF | 117-129 | 11.568 |
| MetJ | 69-76 | 11.073 |
| SoxS | 13-30 | 10.663 |
| UxuR | 20-37 | 10.352 |
| Lrp | 309-320 | 10.063 |
| GalS | 88-103 | 9.382 |
| GalR | 88-103 | 9.382 |
| NarP | 8-14 | 8.982 |
| TorR | 170-179 | 8.822 |
| XylR | 116-133 | 8.109 |
| Fis | 93-113 | 8.088 |
| PurR | 244-259 | 7.503 |
| PhoB | 23-42 | 7.177 |
| ArgR | 368-383 | 7.139 |
| IdnR | 372-387 | 7.044 |
| ArgP | 308-320 | 6.944 |
| DnaA | 364-372 | 6.808 |
| RcsB | 310-323 | 6.678 |
| GlpR | 259-278 | 6.626 |
| MalT | 180-189 | 6.611 |
| FNR | 360-381 | 6.451 |
| H-NS | 61-75 | 6.407 |
| NtrC | 207-223 | 6.305 |
| NarL | 88-94 | 6.305 |
| PspF | 19-35 | 6.118 |
| MetR | 334-357 | 5.960 |
| Nac | 61-75 | 5.867 |
| ModE | 373-399 | 5.666 |
| CpxR | 384-398 | 5.589 |
| Fur | 117-131 | 5.442 |
| OmpR | 363-382 | 5.253 |