| TF name | Position | PWM scan score |
| Nac | 140-154 | 13.246 |
| XylR | 227-244 | 8.518 |
| NarP | 192-198 | 8.308 |
| RcsB | 247-260 | 7.793 |
| AgaR | 242-265 | 7.668 |
| MalT | 301-310 | 7.409 |
| MetJ | 322-329 | 7.190 |
| ArgR | 177-192 | 7.117 |
| Mlc | 77-99 | 6.967 |
| AraC | 78-95 | 6.938 |
| MarA | 281-301 | 6.738 |
| GlpR | 368-387 | 6.685 |
| IHF | 312-324 | 6.676 |
| Fis | 16-36 | 6.322 |
| UxuR | 359-376 | 6.316 |
| TorR | 222-231 | 6.049 |
| CueR | 118-136 | 6.036 |
| NarL | 25-31 | 5.902 |
| FNR | 78-99 | 5.824 |
| GadE | 84-103 | 5.705 |
| ModE | 19-45 | 5.522 |
| H-NS | 83-97 | 5.458 |
| CpxR | 363-377 | 5.187 |
| NtrC | 205-221 | 5.162 |
| ArgP | 374-386 | 5.139 |