| TF name | Position | PWM scan score |
| ArcA | 206-266 | 25.928 |
| NagC | 202-224 | 18.245 |
| Nac | 201-215 | 15.113 |
| CysB | 231-272 | 14.996 |
| FNR | 199-220 | 14.861 |
| DeoR | 250-265 | 13.799 |
| OxyR | 321-365 | 13.630 |
| AgaR | 194-217 | 13.455 |
| Mlc | 345-367 | 13.342 |
| Ada | 320-347 | 13.100 |
| CRP | 343-364 | 12.858 |
| FruR | 354-371 | 12.542 |
| RcsB | 200-213 | 12.538 |
| GntR | 156-175 | 12.505 |
| FhlA | 202-241 | 12.502 |
| H-NS | 202-216 | 12.282 |
| CpxR | 347-361 | 12.206 |
| OmpR | 348-367 | 11.518 |
| AraC | 227-244 | 11.046 |
| Fis | 351-371 | 10.977 |
| GadE | 356-375 | 10.663 |
| XylR | 154-171 | 10.314 |
| GlpR | 240-259 | 10.288 |
| CytR | 232-271 | 10.197 |
| Lrp | 86-97 | 10.173 |
| DcuR | 186-240 | 10.158 |
| ArgP | 356-368 | 10.037 |
| UlaR | 332-351 | 9.981 |
| UxuR | 263-280 | 9.823 |
| IHF | 89-101 | 9.755 |
| PhoP | 50-66 | 9.750 |
| MetR | 162-185 | 9.737 |
| SoxS | 21-38 | 9.634 |
| TyrR | 336-357 | 9.617 |
| ModE | 53-79 | 9.460 |
| PspF | 46-62 | 9.389 |
| MetJ | 89-96 | 9.382 |
| LacI | 141-161 | 9.346 |
| ArgR | 229-244 | 9.242 |
| LexA | 20-39 | 9.189 |
| NarL | 374-380 | 8.993 |
| PhoB | 259-278 | 8.925 |
| MarA | 241-261 | 8.731 |
| GalS | 142-157 | 8.173 |
| GalR | 142-157 | 8.173 |
| GcvA | 343-371 | 8.171 |
| MelR | 328-345 | 7.834 |
| DnaA | 207-215 | 7.617 |
| Rob | 43-63 | 7.447 |
| NarP | 358-364 | 7.423 |
| NorR | 198-214 | 7.257 |
| TorR | 233-242 | 7.080 |
| IdnR | 90-105 | 7.001 |
| NtrC | 151-167 | 5.931 |
| Fur | 199-213 | 5.699 |
| MalT | 189-198 | 5.410 |