| TF name | Position | PWM scan score |
| ArcA | 190-250 | 35.692 |
| CysB | 190-231 | 21.623 |
| DeoR | 200-215 | 19.837 |
| OmpR | 202-221 | 18.488 |
| CytR | 203-242 | 18.229 |
| Fur | 243-257 | 18.201 |
| OxyR | 86-130 | 17.326 |
| DcuR | 302-356 | 16.755 |
| H-NS | 202-216 | 16.442 |
| MarA | 197-217 | 16.060 |
| CRP | 204-225 | 15.753 |
| AgaR | 184-207 | 15.437 |
| FNR | 173-194 | 14.834 |
| NagC | 322-344 | 14.825 |
| CpxR | 315-329 | 14.629 |
| PhoB | 176-195 | 13.504 |
| Fis | 254-274 | 13.353 |
| ArgP | 126-138 | 13.178 |
| Rob | 181-201 | 13.158 |
| XylR | 209-226 | 13.093 |
| Ada | 15-42 | 13.087 |
| Mlc | 196-218 | 13.040 |
| SoxS | 199-216 | 13.038 |
| IHF | 178-190 | 12.985 |
| ModE | 316-342 | 12.818 |
| GcvA | 210-238 | 12.719 |
| Nac | 123-137 | 12.663 |
| GadE | 200-219 | 11.910 |
| TyrR | 177-198 | 11.357 |
| AraC | 139-156 | 11.108 |
| GlpR | 196-215 | 10.757 |
| ArgR | 241-256 | 10.644 |
| CaiF | 296-340 | 10.567 |
| Lrp | 215-226 | 10.428 |
| TorR | 61-70 | 10.329 |
| NarL | 263-269 | 10.241 |
| FhlA | 55-94 | 10.238 |
| UxuR | 310-327 | 10.001 |
| PhoP | 234-250 | 9.948 |
| RcsB | 131-144 | 9.516 |
| MetJ | 225-232 | 9.447 |
| NorR | 120-136 | 9.426 |
| MelR | 118-135 | 9.215 |
| PspF | 127-143 | 9.003 |
| MetR | 263-286 | 8.817 |
| UlaR | 331-350 | 8.620 |
| NarP | 103-109 | 8.575 |
| GntR | 131-150 | 7.925 |
| FruR | 143-160 | 7.650 |
| IdnR | 97-112 | 7.179 |
| RhaS | 197-213 | 6.922 |
| MalT | 52-61 | 5.953 |
| NtrC | 258-274 | 5.801 |
| FadR | 211-227 | 5.575 |
| GalR | 179-194 | 5.131 |
| GalS | 179-194 | 5.131 |
| PurR | 268-283 | 5.112 |