| TF name | Position | PWM scan score |
| ArcA | 152-212 | 28.095 |
| CysB | 2-43 | 18.396 |
| PhoP | 148-164 | 18.329 |
| H-NS | 152-166 | 18.048 |
| CRP | 321-342 | 17.848 |
| OmpR | 28-47 | 17.452 |
| DcuR | 301-355 | 15.892 |
| MarA | 22-42 | 15.845 |
| Rob | 149-169 | 15.818 |
| GlpR | 163-182 | 15.571 |
| GadE | 28-47 | 15.539 |
| OxyR | 175-219 | 14.897 |
| RcsB | 37-50 | 14.567 |
| Fis | 30-50 | 14.420 |
| PhoB | 331-350 | 14.211 |
| FNR | 324-345 | 14.028 |
| IHF | 146-158 | 13.861 |
| SoxS | 324-341 | 13.778 |
| GcvA | 182-210 | 12.683 |
| Lrp | 28-39 | 12.626 |
| CpxR | 149-163 | 12.222 |
| Nac | 29-43 | 12.216 |
| FhlA | 304-343 | 11.907 |
| Ada | 37-64 | 11.754 |
| GalR | 101-116 | 11.540 |
| GalS | 101-116 | 11.540 |
| ArgP | 188-200 | 10.868 |
| CytR | 153-192 | 10.819 |
| AgaR | 92-115 | 10.781 |
| AraC | 207-224 | 10.751 |
| TyrR | 145-166 | 10.630 |
| NorR | 332-348 | 10.601 |
| DeoR | 149-164 | 10.593 |
| Fur | 183-197 | 10.464 |
| XylR | 211-228 | 10.241 |
| NagC | 169-191 | 10.095 |
| TorR | 285-294 | 9.701 |
| ArgR | 149-164 | 9.700 |
| ModE | 1-27 | 9.549 |
| NarL | 217-223 | 9.333 |
| UlaR | 186-205 | 9.315 |
| UxuR | 30-47 | 9.212 |
| GntR | 138-157 | 9.074 |
| Mlc | 30-52 | 8.937 |
| DnaA | 145-153 | 8.866 |
| FadR | 38-54 | 8.315 |
| MelR | 133-150 | 8.168 |
| LexA | 26-45 | 7.715 |
| PspF | 150-166 | 7.499 |
| NarP | 357-363 | 7.466 |
| FruR | 26-43 | 6.739 |
| LacI | 216-236 | 6.623 |
| MetR | 144-167 | 6.535 |
| MalT | 47-56 | 6.503 |
| IdnR | 37-52 | 6.457 |