| TF name | Position | PWM scan score |
| CysB | 295-336 | 24.888 |
| ArcA | 289-349 | 18.280 |
| MetR | 98-121 | 16.615 |
| CytR | 163-202 | 15.882 |
| IHF | 169-181 | 15.402 |
| UxuR | 166-183 | 14.114 |
| OxyR | 294-338 | 13.713 |
| Fis | 155-175 | 13.343 |
| H-NS | 164-178 | 13.285 |
| CpxR | 372-386 | 12.825 |
| DnaA | 372-380 | 12.433 |
| FhlA | 144-183 | 11.714 |
| NtrC | 358-374 | 11.663 |
| GntR | 38-57 | 11.422 |
| Rob | 268-288 | 11.401 |
| PspF | 252-268 | 11.182 |
| AgaR | 278-301 | 11.016 |
| NagC | 284-306 | 10.715 |
| LacI | 118-138 | 10.662 |
| UlaR | 193-212 | 10.565 |
| GadE | 164-183 | 10.325 |
| ArgR | 376-391 | 10.290 |
| NarL | 318-324 | 10.241 |
| OmpR | 319-338 | 10.108 |
| Lrp | 292-303 | 10.011 |
| FNR | 319-340 | 9.909 |
| PhoB | 116-135 | 9.808 |
| ArgP | 168-180 | 9.805 |
| Ada | 367-394 | 9.773 |
| SoxS | 121-138 | 9.757 |
| MarA | 93-113 | 9.733 |
| TyrR | 292-313 | 9.655 |
| CRP | 178-199 | 9.619 |
| AraC | 374-391 | 9.530 |
| XylR | 363-380 | 9.323 |
| Nac | 251-265 | 8.892 |
| Mlc | 282-304 | 8.870 |
| TorR | 95-104 | 8.659 |
| RhaS | 102-118 | 8.624 |
| Fur | 131-145 | 8.351 |
| RcsB | 126-139 | 8.183 |
| IdnR | 324-339 | 7.783 |
| MetJ | 115-122 | 7.733 |
| DeoR | 36-51 | 7.313 |
| GcvA | 159-187 | 7.186 |
| PhoP | 160-176 | 6.901 |
| DcuR | 159-213 | 6.830 |
| NarP | 298-304 | 6.794 |
| FruR | 294-311 | 6.686 |
| MalT | 289-298 | 6.610 |
| FadR | 301-317 | 5.847 |
| PurR | 26-41 | 5.730 |
| GlpR | 154-173 | 5.555 |
| ModE | 292-318 | 5.186 |