| TF name | Position | PWM scan score |
| NorR | 17-33 | 21.046 |
| ArcA | 110-170 | 20.793 |
| OmpR | 260-279 | 15.269 |
| OxyR | 242-286 | 15.167 |
| Mlc | 314-336 | 14.795 |
| UlaR | 158-177 | 14.720 |
| DcuR | 117-171 | 14.156 |
| RcsB | 166-179 | 14.037 |
| XylR | 162-179 | 13.892 |
| NagC | 259-281 | 13.646 |
| GcvA | 165-193 | 13.512 |
| CytR | 238-277 | 13.347 |
| Ada | 243-270 | 13.077 |
| CRP | 260-281 | 13.030 |
| PhoP | 264-280 | 12.983 |
| PhoB | 68-87 | 12.741 |
| AgaR | 147-170 | 12.665 |
| IHF | 23-35 | 12.445 |
| H-NS | 135-149 | 12.438 |
| ModE | 15-41 | 12.093 |
| CysB | 115-156 | 11.864 |
| GntR | 375-394 | 11.242 |
| TyrR | 257-278 | 11.204 |
| GadE | 142-161 | 11.151 |
| FNR | 259-280 | 11.141 |
| Nac | 107-121 | 10.932 |
| Rob | 15-35 | 10.898 |
| MetR | 361-384 | 10.637 |
| Fis | 260-280 | 10.615 |
| AraC | 176-193 | 10.517 |
| CpxR | 44-58 | 10.478 |
| Lrp | 143-154 | 10.416 |
| DeoR | 10-25 | 10.138 |
| Fur | 160-174 | 10.117 |
| SoxS | 21-38 | 9.826 |
| MarA | 94-114 | 9.588 |
| LexA | 17-36 | 9.439 |
| IdnR | 73-88 | 9.304 |
| GalR | 76-91 | 9.195 |
| GalS | 76-91 | 9.195 |
| NarL | 104-110 | 8.685 |
| GlpR | 8-27 | 7.521 |
| DnaA | 129-137 | 7.406 |
| FadR | 13-29 | 7.330 |
| ArgP | 244-256 | 7.244 |
| TorR | 96-105 | 7.167 |
| NarP | 249-255 | 6.945 |
| ArgR | 8-23 | 6.943 |
| PspF | 9-25 | 6.854 |
| FhlA | 256-295 | 6.239 |
| MalT | 355-364 | 6.167 |
| FruR | 256-273 | 5.648 |
| NtrC | 27-43 | 5.169 |
| MetJ | 364-371 | 5.033 |