| TF name | Position | PWM scan score |
| ArcA | 332-392 | 38.102 |
| CysB | 354-395 | 24.318 |
| OmpR | 356-375 | 21.996 |
| DcuR | 166-220 | 21.603 |
| Fur | 270-284 | 19.833 |
| Fis | 360-380 | 19.607 |
| Ada | 135-162 | 19.258 |
| PhoP | 364-380 | 19.227 |
| CytR | 107-146 | 17.697 |
| FNR | 354-375 | 16.200 |
| H-NS | 357-371 | 15.802 |
| ArgR | 366-381 | 15.524 |
| ModE | 2-28 | 15.419 |
| TyrR | 316-337 | 15.333 |
| PspF | 44-60 | 15.144 |
| UxuR | 33-50 | 15.081 |
| DeoR | 326-341 | 15.064 |
| AgaR | 309-332 | 14.827 |
| IHF | 304-316 | 14.760 |
| AraC | 147-164 | 14.728 |
| NagC | 154-176 | 14.662 |
| ArgP | 369-381 | 14.625 |
| RcsB | 9-22 | 14.292 |
| GcvA | 180-208 | 14.258 |
| CRP | 290-311 | 14.108 |
| Mlc | 121-143 | 13.794 |
| MetR | 193-216 | 13.615 |
| OxyR | 344-388 | 13.611 |
| MarA | 344-364 | 13.551 |
| NorR | 298-314 | 12.545 |
| PhoB | 32-51 | 12.286 |
| DnaA | 324-332 | 12.065 |
| UlaR | 307-326 | 12.036 |
| XylR | 366-383 | 11.891 |
| CpxR | 325-339 | 11.865 |
| Lrp | 150-161 | 11.725 |
| SoxS | 123-140 | 11.708 |
| Nac | 346-360 | 11.701 |
| PurR | 76-91 | 11.513 |
| Rob | 354-374 | 10.858 |
| GadE | 354-373 | 10.580 |
| MelR | 75-92 | 9.890 |
| IdnR | 305-320 | 9.838 |
| GntR | 153-172 | 9.651 |
| MetJ | 284-291 | 9.447 |
| NarL | 369-375 | 9.444 |
| TorR | 191-200 | 9.392 |
| FhlA | 316-355 | 9.000 |
| RhaS | 224-240 | 8.504 |
| NarP | 25-31 | 7.325 |
| GlpR | 359-378 | 7.139 |
| MalT | 57-66 | 6.687 |
| GalS | 294-309 | 6.409 |
| GalR | 294-309 | 6.409 |
| FruR | 45-62 | 5.209 |
| TrpR | 167-184 | 5.125 |