| TF name | Position | PWM scan score |
| ArcA | 103-163 | 30.339 |
| OmpR | 146-165 | 19.176 |
| CysB | 113-154 | 19.036 |
| PhoB | 136-155 | 18.701 |
| OxyR | 92-136 | 18.319 |
| CytR | 67-106 | 17.865 |
| PhoP | 145-161 | 17.838 |
| Rob | 66-86 | 17.756 |
| MarA | 292-312 | 16.056 |
| IdnR | 141-156 | 15.915 |
| NagC | 118-140 | 15.787 |
| Nac | 375-389 | 15.183 |
| Mlc | 111-133 | 14.835 |
| TrpR | 181-198 | 14.697 |
| FhlA | 120-159 | 14.441 |
| H-NS | 154-168 | 14.347 |
| MetJ | 94-101 | 13.538 |
| Ada | 344-371 | 13.449 |
| GadE | 268-287 | 13.278 |
| CRP | 62-83 | 13.234 |
| Fis | 120-140 | 12.934 |
| ArgR | 123-138 | 12.788 |
| ModE | 215-241 | 12.490 |
| ArgP | 150-162 | 12.295 |
| GcvA | 148-176 | 12.160 |
| FNR | 65-86 | 11.963 |
| SoxS | 294-311 | 11.707 |
| Lrp | 68-79 | 11.650 |
| DeoR | 297-312 | 11.078 |
| IHF | 186-198 | 10.964 |
| UlaR | 183-202 | 10.793 |
| XylR | 145-162 | 10.128 |
| RcsB | 192-205 | 9.877 |
| AgaR | 102-125 | 9.748 |
| DcuR | 106-160 | 9.721 |
| NarP | 20-26 | 9.521 |
| GlpR | 291-310 | 9.367 |
| AraC | 249-266 | 9.267 |
| CpxR | 153-167 | 8.783 |
| PspF | 148-164 | 8.748 |
| MetR | 92-115 | 8.620 |
| NorR | 229-245 | 8.593 |
| NarL | 122-128 | 8.280 |
| GalR | 144-159 | 7.866 |
| GalS | 144-159 | 7.866 |
| DnaA | 268-276 | 7.406 |
| TorR | 151-160 | 7.342 |
| MalT | 195-204 | 7.224 |
| UxuR | 99-116 | 6.969 |
| GntR | 112-131 | 6.525 |
| NtrC | 140-156 | 6.514 |
| LexA | 374-393 | 6.089 |
| Fur | 383-397 | 5.829 |
| PurR | 302-317 | 5.318 |