| TF name | Position | PWM scan score |
| ArcA | 118-178 | 24.960 |
| DcuR | 309-363 | 21.315 |
| UxuR | 244-261 | 18.690 |
| OmpR | 140-159 | 18.591 |
| ModE | 340-366 | 16.791 |
| CytR | 118-157 | 16.287 |
| XylR | 312-329 | 16.233 |
| CysB | 131-172 | 16.065 |
| PspF | 213-229 | 15.906 |
| Rob | 271-291 | 15.837 |
| Nac | 140-154 | 15.133 |
| Fis | 145-165 | 14.613 |
| Fur | 121-135 | 14.532 |
| OxyR | 277-321 | 14.505 |
| GadE | 117-136 | 14.394 |
| AgaR | 128-151 | 14.389 |
| IHF | 285-297 | 13.903 |
| UlaR | 76-95 | 13.828 |
| NagC | 142-164 | 13.631 |
| DnaA | 99-107 | 13.399 |
| H-NS | 141-155 | 13.361 |
| TyrR | 61-82 | 13.264 |
| CRP | 49-70 | 12.925 |
| SoxS | 267-284 | 12.545 |
| Mlc | 132-154 | 12.537 |
| AraC | 268-285 | 12.149 |
| FadR | 338-354 | 12.133 |
| MetR | 341-364 | 12.070 |
| FNR | 367-388 | 11.884 |
| PhoP | 266-282 | 11.734 |
| PhoB | 285-304 | 11.521 |
| Lrp | 194-205 | 11.213 |
| FruR | 269-286 | 11.208 |
| NorR | 53-69 | 10.648 |
| CpxR | 240-254 | 10.483 |
| CueR | 365-383 | 10.264 |
| GcvA | 296-324 | 10.224 |
| ArgR | 151-166 | 10.176 |
| MetJ | 337-344 | 10.171 |
| NarL | 53-59 | 10.130 |
| Ada | 64-91 | 9.877 |
| NtrC | 136-152 | 9.581 |
| DeoR | 52-67 | 9.491 |
| LexA | 145-164 | 9.442 |
| GlpR | 89-108 | 8.648 |
| MalT | 328-337 | 8.612 |
| NarP | 252-258 | 8.594 |
| TorR | 288-297 | 8.594 |
| ArgP | 128-140 | 8.494 |
| RcsB | 192-205 | 8.423 |
| IdnR | 120-135 | 8.250 |
| MelR | 348-365 | 8.189 |
| MarA | 152-172 | 8.174 |
| LacI | 158-178 | 8.003 |
| GntR | 136-155 | 7.880 |
| PurR | 349-364 | 7.148 |
| GalR | 281-296 | 5.228 |
| GalS | 281-296 | 5.228 |