| TF name | Position | PWM scan score |
| ArcA | 97-157 | 41.164 |
| OxyR | 77-121 | 31.215 |
| CysB | 117-158 | 24.600 |
| OmpR | 120-139 | 21.597 |
| CytR | 172-211 | 20.810 |
| UlaR | 281-300 | 20.696 |
| GcvA | 116-144 | 18.809 |
| H-NS | 122-136 | 18.674 |
| Fis | 124-144 | 18.655 |
| PhoP | 71-87 | 18.435 |
| FNR | 67-88 | 18.270 |
| Fur | 346-360 | 18.245 |
| DeoR | 61-76 | 17.688 |
| AraC | 150-167 | 17.588 |
| GadE | 122-141 | 17.311 |
| CpxR | 172-186 | 17.026 |
| DcuR | 97-151 | 16.161 |
| ArgR | 127-142 | 15.882 |
| Mlc | 294-316 | 15.725 |
| TyrR | 154-175 | 15.722 |
| AgaR | 280-303 | 15.339 |
| CRP | 100-121 | 15.247 |
| PspF | 88-104 | 14.825 |
| Nac | 123-137 | 14.818 |
| MarA | 58-78 | 14.796 |
| XylR | 169-186 | 14.164 |
| UxuR | 78-95 | 14.020 |
| IHF | 119-131 | 13.988 |
| Rob | 144-164 | 13.540 |
| GlpR | 140-159 | 13.230 |
| NorR | 306-322 | 12.911 |
| NagC | 292-314 | 12.643 |
| ModE | 81-107 | 12.614 |
| GntR | 158-177 | 12.330 |
| PhoB | 144-163 | 12.184 |
| MetR | 308-331 | 12.136 |
| ArgP | 123-135 | 11.548 |
| Lrp | 121-132 | 11.398 |
| DnaA | 102-110 | 10.924 |
| LexA | 293-312 | 10.333 |
| Ada | 191-218 | 10.307 |
| IdnR | 131-146 | 9.932 |
| SoxS | 369-386 | 9.845 |
| LacI | 36-56 | 9.467 |
| NarL | 354-360 | 9.444 |
| RcsB | 319-332 | 9.373 |
| TorR | 361-370 | 9.243 |
| FruR | 285-302 | 8.428 |
| NarP | 206-212 | 8.372 |
| MelR | 57-74 | 8.292 |
| MetJ | 237-244 | 8.280 |
| CaiF | 285-329 | 7.327 |
| GalR | 383-398 | 7.186 |
| GalS | 383-398 | 7.186 |
| RhaS | 52-68 | 7.061 |
| TrpR | 39-56 | 6.779 |
| FhlA | 291-330 | 6.539 |
| MalT | 252-261 | 6.154 |