| TF name | Position | PWM scan score |
| ArcA | 95-155 | 29.219 |
| DcuR | 181-235 | 20.891 |
| CysB | 51-92 | 20.763 |
| OxyR | 57-101 | 20.232 |
| CRP | 219-240 | 16.598 |
| AraC | 84-101 | 16.467 |
| CytR | 95-134 | 16.401 |
| RcsB | 150-163 | 16.235 |
| FNR | 126-147 | 15.662 |
| Mlc | 118-140 | 14.364 |
| AgaR | 62-85 | 14.185 |
| ModE | 212-238 | 13.395 |
| UlaR | 108-127 | 13.211 |
| NagC | 230-252 | 13.211 |
| OmpR | 223-242 | 13.197 |
| TyrR | 143-164 | 13.123 |
| IHF | 92-104 | 12.638 |
| ArgP | 256-268 | 12.627 |
| Rob | 230-250 | 12.456 |
| PhoP | 355-371 | 12.072 |
| TorR | 68-77 | 12.035 |
| Fis | 143-163 | 12.005 |
| PspF | 224-240 | 11.867 |
| SoxS | 78-95 | 11.856 |
| PhoB | 276-295 | 11.300 |
| Lrp | 29-40 | 11.071 |
| GadE | 82-101 | 11.000 |
| MetR | 127-150 | 10.978 |
| ArgR | 215-230 | 10.756 |
| GcvA | 103-131 | 10.683 |
| DeoR | 231-246 | 10.571 |
| H-NS | 311-325 | 10.491 |
| LacI | 64-84 | 10.404 |
| CpxR | 113-127 | 10.354 |
| XylR | 59-76 | 10.131 |
| MetJ | 108-115 | 9.850 |
| DnaA | 229-237 | 9.795 |
| GlpR | 118-137 | 9.625 |
| Nac | 67-81 | 9.572 |
| MarA | 349-369 | 9.550 |
| Ada | 47-74 | 9.427 |
| IdnR | 150-165 | 9.133 |
| NorR | 254-270 | 8.798 |
| Fur | 216-230 | 8.724 |
| NarL | 85-91 | 8.481 |
| CaiF | 203-247 | 8.468 |
| RhaS | 201-217 | 8.462 |
| FadR | 45-61 | 8.409 |
| LexA | 375-394 | 8.025 |
| FruR | 354-371 | 7.787 |
| GntR | 27-46 | 7.786 |
| UxuR | 57-74 | 7.429 |
| NarP | 63-69 | 6.657 |
| CueR | 343-361 | 6.181 |
| FhlA | 202-241 | 6.007 |
| MelR | 217-234 | 5.934 |
| GalS | 297-312 | 5.691 |
| GalR | 297-312 | 5.691 |
| PurR | 297-312 | 5.338 |