| TF name | Position | PWM scan score |
| ArcA | 44-104 | 27.107 |
| CytR | 45-84 | 17.725 |
| CysB | 80-121 | 17.677 |
| NagC | 66-88 | 17.562 |
| OxyR | 192-236 | 16.747 |
| UlaR | 342-361 | 15.741 |
| OmpR | 71-90 | 14.856 |
| Rob | 323-343 | 14.619 |
| RcsB | 231-244 | 14.458 |
| GlpR | 71-90 | 14.062 |
| AgaR | 33-56 | 13.726 |
| MarA | 9-29 | 13.549 |
| DcuR | 49-103 | 13.354 |
| TyrR | 323-344 | 13.146 |
| IdnR | 226-241 | 13.095 |
| PhoB | 11-30 | 12.684 |
| ArgR | 331-346 | 12.665 |
| CRP | 354-375 | 12.626 |
| GntR | 357-376 | 12.532 |
| MelR | 267-284 | 12.217 |
| GcvA | 74-102 | 12.180 |
| Fis | 69-89 | 12.079 |
| FNR | 219-240 | 12.057 |
| Mlc | 124-146 | 11.962 |
| Nac | 45-59 | 11.914 |
| MetR | 48-71 | 11.850 |
| MetJ | 225-232 | 11.820 |
| NorR | 325-341 | 11.484 |
| H-NS | 83-97 | 11.366 |
| DeoR | 75-90 | 11.264 |
| GadE | 75-94 | 11.255 |
| Lrp | 233-244 | 11.045 |
| XylR | 200-217 | 11.037 |
| Ada | 177-204 | 10.713 |
| IHF | 228-240 | 10.627 |
| TorR | 365-374 | 10.214 |
| PhoP | 328-344 | 10.103 |
| NarL | 230-236 | 9.729 |
| FhlA | 62-101 | 9.687 |
| SoxS | 319-336 | 9.626 |
| NtrC | 63-79 | 9.261 |
| ArgP | 48-60 | 9.235 |
| AraC | 38-55 | 9.038 |
| PspF | 143-159 | 8.664 |
| DnaA | 278-286 | 7.926 |
| MalT | 59-68 | 7.926 |
| CpxR | 52-66 | 7.905 |
| GalR | 325-340 | 7.728 |
| GalS | 325-340 | 7.728 |
| RhaS | 236-252 | 7.700 |
| PurR | 291-306 | 7.531 |
| FadR | 21-37 | 7.504 |
| FruR | 34-51 | 7.489 |
| Fur | 113-127 | 7.417 |
| ModE | 189-215 | 6.489 |
| UxuR | 47-64 | 6.271 |
| LexA | 325-344 | 5.991 |
| NarP | 336-342 | 5.293 |