Origin IGS:
tgattcggcgtgtaccacgcataaccattaaccattgtccgaaagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggtttattccggcatctcatcgcgtcatttgttcgaaggaaccattttttttacctatctttgaggcgtaattaaataatcattaatcataaggaattatat
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9
atataattccttatgattaatgattatttaattacgcctcaaagataggtaaaaaaaatggttccttcgaacaaatgacgcgatgagatgccggaataaacccagattacgcaatagaagaaataagaatgaatttaattcaggccttcagccctccgaacaaggtccggatgtcgataccccacccttgcgggatggggctgaaataattcgggctttcagccctttcggacaatggttaatggttatgcgtggtacacgccgaatca

Mask Tandem Repeat Region ================================================
tgattcggcgtgtaccacgcataaccattaaccattgtccgaaagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggtttattccggcatctcatcgcgtcatttgttcgaaggaaccattttttttacctatctttgaggcgtaattaaataatcattaatcataaggaattatat

Find is-nt database================================================
Query_seq: TF3003:TF3004|TF3003:TF3004:hypothetical protein:phosphoribosylformylglycinamidine (FGAM) synthase:->->:3220690..3220958 269
tgattcggcgtgtaccacgcataaccattaaccattgtccgaaagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggtttattccggcatctcatcgcgtcatttgttcgaaggaaccattttttttacctatctttgaggcgtaattaaataatcattaatcataaggaattatat
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find is-aa database================================================
Query_seq: TF3003:TF3004|TF3003:TF3004:hypothetical protein:phosphoribosylformylglycinamidine (FGAM) synthase:->->:3220690..3220958 269
tgattcggcgtgtaccacgcataaccattaaccattgtccgaaagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggtttattccggcatctcatcgcgtcatttgttcgaaggaaccattttttttacctatctttgaggcgtaattaaataatcattaatcataaggaattatat
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find nr database================================================
Query_seq: TF3003:TF3004|TF3003:TF3004:hypothetical protein:phosphoribosylformylglycinamidine (FGAM) synthase:->->:3220690..3220958 269
tgattcggcgtgtaccacgcataaccattaaccattgtccgaaagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggtttattccggcatctcatcgcgtcatttgttcgaaggaaccattttttttacctatctttgaggcgtaattaaataatcattaatcataaggaattatat
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

tgattcggcgtgtaccacgcataaccattaaccattgtccgaaagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggtttattccggcatctcatcgcgtcatttgttcgaaggaaccattttttttacctatctttgaggcgtaattaaataatcattaatcataaggaattatat
Predict ORF larger than 30AA ================================================
Protein_Len: 39	Strand: +	Start: 3	End: 119
.. M  R  R  V  P  R  I  T  I  N  H  C  P  K  G  L  K  A  R  I  I  S  A  P  S  R  K  G  G  V  S  T  S  G  P  C  S  E  G ......................................................................................................................................................
Protein_Len: 31	Strand: +	Start: 35	End: 127
.................................. M  S  E  R  A  E  S  P  N  Y  F  S  P  I  P  Q  G  W  G  I  D  I  R  T  L  F  G  G  L  K  A ..............................................................................................................................................
Protein_Len: 31	Strand: +	Start: 136	End: 228
....................................................................................................................................... M  H  S  Y  F  F  Y  C  V  I  W  V  Y  S  G  I  S  S  R  H  L  F  E  G  T  I  F  F  T  Y  L .........................................
Protein_Len: 37	Strand: -	Start: 64	End: 174
............................................................... K  L  G  M  G  C  P  H  P  I  S  M  R  V  K  N  P  P  S  F  A  Q  I  L  N  M  R  I  E  E  I  A  Y  D  P  N  M ...............................................................................................
Protein_Len: 60	Strand: -	Start: 2	End: 187
. R  T  G  R  M  V  M  L  W  Q  G  F  P  S  F  A  R  I  I  E  A  G  D  R  L  P  P  T  D  V  D  P  G  Q  E  S  P  Q  L  G  S  N  F  E  N  K  N  R  R  N  R  L  R  P  K  N  R  C  R  M ..................................................................................

tgattcggcgtgtaccacgcataaccattaaccattgtccgaaagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggtttattccggcatctcatcgcgtcatttgttcgaaggaaccattttttttacctatctttgaggcgtaattaaataatcattaatcataaggaattatat
Predict Promoter with matrix: RpoD-15 score > 80================================================

Predict Promoter with matrix: RpoD-16 score > 80================================================

Predict Promoter with matrix: RpoD-17 score > 80================================================

Predict Promoter with matrix: RpoD-18 score > 80================================================

Predict Promoter with matrix: RpoD-19 score > 80================================================

Predict Promoter with matrix: RpoN score > 80================================================

tgattcggcgtgtaccacgcataaccattaaccattgtccgaaagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggtttattccggcatctcatcgcgtcatttgttcgaaggaaccattttttttacctatctttgaggcgtaattaaataatcattaatcataaggaattatat
Predict TransTerm conf > 70================================================
TransTerm Strand: -	Conf: 73	HP_score: -9.1	Tail_Score: -3.54919	Start: 45	End: 57	Full_Region: gggctgaaataattc gggct ttc agccc tttcggacaatggtt
............................................gggctttcagccc....................................................................................................................................................................................................................

Find igs database================================================
Query_seq: TF3003:TF3004|TF3003:TF3004:hypothetical protein:phosphoribosylformylglycinamidine (FGAM) synthase:->->:3220690..3220958 269
tgattcggcgtgtaccacgcataaccattaaccattgtccgaaagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggtttattccggcatctcatcgcgtcatttgttcgaaggaaccattttttttacctatctttgaggcgtaattaaataatcattaatcataaggaattatat
Intra-Species Hit: Count: 14	Min: 1	Max: 269	Len: 269
Subject: tfor_TF3003_TF3004|hypothetical protein:phosphoribosylformylglycinamidine (FGAM) synthase|POSITIVE:POSITIVE|[3220690,3220958]|269
HSP  1	e-value: 1.0E-136	bit: 486.0	Len: 269	Query Start:1	Query End:269	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 269
tgattcggcgtgtaccacgcataaccattaaccattgtccgaaagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggtttattccggcatctcatcgcgtcatttgttcgaaggaaccannnnnnnnacctatctttgaggcgtaattaaataatcattaatcataaggaattatat
tgattcggcgtgtaccacgcataaccattaaccattgtccgaaagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggtttattccggcatctcatcgcgtcatttgttcgaaggaaccattttttttacctatctttgaggcgtaattaaataatcattaatcataaggaattatat

Subject: tfor_TF0677_TF0678|ATP-binding protein, Mrp/Nbp35 family, involved in chromosome partitioning:hypothetical protein|POSITIVE:POSITIVE|[721043,721242]|200
HSP  1	e-value: 3.0E-92	bit: 339.0	Len: 175	Query Start:1	Query End:175	Subject Strand: NEGATIVE	Subject Start: 4	Subject End: 178
tgattcggcgtgtaccacgcataaccattaaccattgtccgaaagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggtttatt..............................................................................................
tgattcggcgtgtaccacgcataaccattaaccattgtccgaaagggctgaaagcccgaattatttcagccctatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggtttatt..............................................................................................

Subject: tfor_TF2190_TF2191|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2365707,2366073]|367
HSP  1	e-value: 7.0E-87	bit: 321.0	Len: 174	Query Start:1	Query End:174	Subject Strand: NEGATIVE	Subject Start: 127	Subject End: 300
tgattcggcgtgtaccacgcataaccattaaccattgtccgaaagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggtttat...............................................................................................
tgattcggagtgtaccgcgcataaccattaaccattgtccgaaagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatccgggtttat...............................................................................................

Subject: tfor_TF0821_TF0822|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[880256,880626]|371
HSP  1	e-value: 6.0E-69	bit: 262.0	Len: 136	Query Start:1	Query End:136	Subject Strand: NEGATIVE	Subject Start: 200	Subject End: 335
tgattcggcgtgtaccacgcataaccattaaccattgtccgaaagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaa.....................................................................................................................................
tgattcggcgtgtaccacgcataaccattgaccattgtccgaaagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaa.....................................................................................................................................

Subject: tfor_TF2047_TF2048|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[2210359,2210782]|424
HSP  1	e-value: 2.0E-56	bit: 220.0	Len: 128	Query Start:44	Query End:171	Subject Strand: POSITIVE	Subject Start: 264	Subject End: 393
...........................................agggctgaaagcccgaattatttcagccccatcccgcaagggtggggtat--cgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggtt..................................................................................................
...........................................agggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatatcgacatccggaccttgttcggagggctgaaagcctgaattaaattcattcttatttcttctattgcggaatctgggtt..................................................................................................

Subject: tfor_TF1473_TF1474|hypothetical protein:6- phosphogluconolactonase|POSITIVE:POSITIVE|[1567027, 1567481]|455
HSP  1	e-value: 3.0E-55	bit: 216.0	Len: 145	Query Start:29	Query End:173	Subject Strand: POSITIVE	Subject Start: 242	Subject End: 386
............................taaccattgtccgaaagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggttta................................................................................................
............................taaccattacccgaaagggctgaaagcccgaattatttcagccccatcccgtaagggtgggggatcgacatccggaccttgttcgaagggctgaaggcctgaattaaattcatccttatttgttctattgccgaatctgggttta................................................................................................

Subject: tfor_TF0021_TF0022|outer membrane phospholipase A:two-component system sensor histidine kinase|POSITIVE:POSITIVE|[16980,17434]|455
HSP  1	e-value: 7.0E-47	bit: 188.0	Len: 111	Query Start:39	Query End:149	Subject Strand: POSITIVE	Subject Start: 116	Subject End: 226
......................................ccgaaagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttattt........................................................................................................................
......................................ccgaaagggccgggagcccgaattatttcagccccatcccgtaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttattt........................................................................................................................

Subject: tfor_TF2025_TF2026|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2182241,2182798]|558
HSP  1	e-value: 3.0E-43	bit: 176.0	Len: 137	Query Start:22	Query End:158	Subject Strand: POSITIVE	Subject Start: 85	Subject End: 224
.....................taaccattaaccattgtccgaaagggctgaaa-gcccgaattatttcagccccatcccgc--aagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattg...............................................................................................................
.....................taaccattgactattgtccgaaagggctgaaaagccctagttatttcagccccatcccgcgcaagggtgggataccgatatccagaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattg...............................................................................................................

Subject: tfor_TF0585_TF0586|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[616824,617452]|629
HSP  1	e-value: 8.0E-28	bit: 125.0	Len: 143	Query Start:29	Query End:171	Subject Strand: NEGATIVE	Subject Start: 178	Subject End: 320
............................taaccattgtccgaaagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcgacatccggaccttgttcggagggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggtt..................................................................................................
............................taaccattacccgaaagggctgaaagccagatatatttcagccccatcccgtaagggtgggggatccatgcccatatcttggttagagggctgaaggcctgaattaaattcattcttattggttctattgcggaatctgggtt..................................................................................................

Subject: tfor_TF1762_TF1763|hypothetical protein:K+-dependent Na+/Ca+ exchanger related-protein|POSITIVE:POSITIVE|[1899709,1900545]|837
HSP  1	e-value: 5.0E-20	bit: 99.6	Len: 62	Query Start:112	Query End:173	Subject Strand: POSITIVE	Subject Start: 299	Subject End: 360
...............................................................................................................cggagggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggttta................................................................................................
...............................................................................................................cggagggctgaaggcctgaattaaattcatttttatttcttctattgcggaatccgggttta................................................................................................
HSP  2	e-value: 1.0E-17	bit: 91.7	Len: 54	Query Start:43	Query End:96	Subject Strand: POSITIVE	Subject Start: 231	Subject End: 284
..........................................aagggctgaaagcccgaattatttcagccccatcccgcaagggtggggtatcga.............................................................................................................................................................................
..........................................aagggctgaaagcccgacatatttcagccccatcccgcaagggtggggtatcga.............................................................................................................................................................................

Subject: tfor_TF0029_TF0030|hypothetical protein:N-acetylneuraminate lyase|POSITIVE:POSITIVE|[25123,25909]|787
HSP  1	e-value: 7.0E-19	bit: 95.6	Len: 60	Query Start:115	Query End:174	Subject Strand: NEGATIVE	Subject Start: 9	Subject End: 68
..................................................................................................................agggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggtttat...............................................................................................
..................................................................................................................agggctgaaggcctgaattaaattcattcttattggttctattgcggaatctgggtttat...............................................................................................
HSP  2	e-value: 4.0E-14	bit: 79.8	Len: 48	Query Start:43	Query End:90	Subject Strand: NEGATIVE	Subject Start: 213	Subject End: 260
..........................................aagggctgaaagcccgaattatttcagccccatcccgcaagggtgggg...................................................................................................................................................................................
..........................................aagggctggaagcccgaattatttcagccccatcccgtaagggtgggg...................................................................................................................................................................................

Subject: tfor_TF1654_TF1655|hypothetical protein:long-chain-fatty-acid-CoA ligase|POSITIVE:POSITIVE|[1768766,1769418]|653
HSP  1	e-value: 5.0E-17	bit: 89.7	Len: 57	Query Start:115	Query End:171	Subject Strand: NEGATIVE	Subject Start: 390	Subject End: 446
..................................................................................................................agggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggtt..................................................................................................
..................................................................................................................agggctgaaggcctgaattaaattcattcttattggttctattgcggaatctgggtt..................................................................................................
HSP  2	e-value: 1.0E-5	bit: 52.0	Len: 30	Query Start:1	Query End:30	Subject Strand: NEGATIVE	Subject Start: 557	Subject End: 586
tgattcggcgtgtaccacgcataaccatta...............................................................................................................................................................................................................................................
tgattcggcgtgtaacacgcataaccatta...............................................................................................................................................................................................................................................

Subject: tfor_TF1483_TF1484|glycosyltransferase family protein:penicillin binding protein|POSITIVE:POSITIVE|[1578886,1579698]|813
HSP  1	e-value: 5.0E-17	bit: 89.7	Len: 69	Query Start:115	Query End:183	Subject Strand: POSITIVE	Subject Start: 577	Subject End: 645
..................................................................................................................agggctgaaggcctgaattaaattcattcttatttcttctattgcgtaatctgggtttattccggcatc......................................................................................
..................................................................................................................agggctgaaagcctgaattaaattcattcttatttcttctattgcggaatccggggttatatcggcatc......................................................................................
HSP  2	e-value: 1.0E-5	bit: 52.0	Len: 30	Query Start:1	Query End:30	Subject Strand: POSITIVE	Subject Start: 541	Subject End: 570
tgattcggcgtgtaccacgcataaccatta...............................................................................................................................................................................................................................................
tgattcggcgtgtaacacgcataaccatta...............................................................................................................................................................................................................................................

Subject: tfor_TF0179_TF0180|pyrophosphate-energized proton pump:carboxynorspermidine decarboxylase|POSITIVE:POSITIVE|[190752,191406]|655
HSP  1	e-value: 3.0E-6	bit: 54.0	Len: 35	Query Start:115	Query End:149	Subject Strand: POSITIVE	Subject Start: 483	Subject End: 517
..................................................................................................................agggctgaaggcctgaattaaattcattcttattt........................................................................................................................
..................................................................................................................agggctgaaggtctgaattaaattcatccttattt........................................................................................................................
HSP  2	e-value: 1.0E-5	bit: 52.0	Len: 30	Query Start:1	Query End:30	Subject Strand: POSITIVE	Subject Start: 327	Subject End: 356
tgattcggcgtgtaccacgcataaccatta...............................................................................................................................................................................................................................................
tgattcggcgtgtaacacgcataaccatta...............................................................................................................................................................................................................................................

Inter-species Hit: Count: 0

Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
UGAUUCGGCGUGUACCACGCAUAACCAUUAACCAUUGUCCGAAAGGGCUGAAAGCCCGAAUUAUUUCAGCCCCAUCCCGCAAGGGUGGGGUAUCGACAUCCGGACCUUGUUCGGAGGGCUGAAGGCCUGAAUUAAAUUCAUUCUUAUUUCUUCUAUUGCGUAAUCUGGGUUUAUUCCGGCAUCUCAUCGCGUCAUUUGUUCGAAGGAACCAUUUUUUUUACCUAUCUUUGAGGCGUAAUUAAAUAAUCAUUAAUCAUAAGGAAUUAUAU
((((((.(((((...)))))...........((...((((....))))....(((((...........((((((.(((....))))))))).......(((((((...))))))))))))...))...))))))......(((((((............(..(((((((.....))))).))..)..(((.(((...((((....))))...................))).)))....................)))))))....... (-74.85)

Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
AUAUAAUUCCUUAUGAUUAAUGAUUAUUUAAUUACGCCUCAAAGAUAGGUAAAAAAAAUGGUUCCUUCGAACAAAUGACGCGAUGAGAUGCCGGAAUAAACCCAGAUUACGCAAUAGAAGAAAUAAGAAUGAAUUUAAUUCAGGCCUUCAGCCCUCCGAACAAGGUCCGGAUGUCGAUACCCCACCCUUGCGGGAUGGGGCUGAAAUAAUUCGGGCUUUCAGCCCUUUCGGACAAUGGUUAAUGGUUAUGCGUGGUACACGCCGAAUCA
.............(((((((.......))))))).........(((.(((........(((((((.(((..(....)...))).).)).))))............((((((((.............((((.......)))).((((...((((.((((((.(((((((((((.(((...((((((((....))).))))).)))....))))))))))).......))))))....))))...)))).))))))))....)))..))). (-63.10)

Find mRNA Target Using  Conserved IGS================================================
5'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
1107	130	81	94	45	tfor:TF2547|5end_hypothetical_protein_2730664..2730894_POSITIVE
1071	90	41	217	168	tfor:TF0822|5end_hypothetical_protein_880487..880717_POSITIVE
1071	90	41	217	168	tfor:TF0821|5end_hypothetical_protein_879879..880109_POSITIVE
1051	118	71	231	183	tfor:TF0678|5end_hypothetical_protein_721103..721333_POSITIVE
985	50	1	215	166	tfor:TF0679|5end_hypothetical_protein_721155..721385_POSITIVE
909	60	11	218	169	tfor:TF2191|5end_hypothetical_protein_2365934..2366164_POSITIVE
858	150	101	54	5	tfor:TF0820|5end_hypothetical_protein_879656..879886_POSITIVE
833	90	42	48	1	tfor:TF2840|5end_hypothetical_protein_3031060..3031290_POSITIVE
682	50	1	201	159	tfor:TF1655|5end_long-chain-fatty-acid-CoA_ligase_1769279..1769509_POSITIVE
664	130	81	226	176	tfor:TF2745|5end_hypothetical_protein_2927562..2927792_POSITIVE
639	159	113	231	179	tfor:TF0449|5end_transposase_467891..468121_POSITIVE
554	59	11	172	131	tfor:TF3105|5end_hypothetical_protein_3338068..3338298_POSITIVE
521	49	1	183	134	tfor:TF2796|5end_cytochrome_D_ubiquinol_oxidase,_subunit_II_2981269..2981499_POSITIVE
511	42	1	151	111	tfor:TF2817|5end_hypothetical_protein_3007358..3007588_POSITIVE
511	130	83	160	118	tfor:TF1274|5end_hypothetical_protein_1357621..1357851_POSITIVE
487	192	151	179	123	tfor:TF2011|5end_transposase_2163893..2164123_POSITIVE
477	130	81	224	175	tfor:TF2641|5end_riboflavin_kinase/FAD_synthase_2809681..2809911_POSITIVE
476	42	4	111	70	tfor:TF1846|5end_hypothetical_protein_1996726..1996956_POSITIVE
468	126	81	55	9	tfor:TF1417|5end_conserved_hypothetical_protein_1499544..1499774_POSITIVE
458	42	1	97	54	tfor:TF1183|5end_hypothetical_protein_1268391..1268621_POSITIVE

3'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
970	140	91	52	3	tfor:TF0677|3end_ATP-binding_protein,_Mrp/Nbp35_family,_involved_in_chromosome_partitioning_720982..721132_POSITIVE
769	160	111	57	8	tfor:TF0819|3end_phosphoglycerate_mutase_879729..879879_POSITIVE
727	41	1	151	111	tfor:TF0820|3end_hypothetical_protein_879942..880092_POSITIVE
673	160	113	68	15	tfor:TF0029|3end_hypothetical_protein_25062..25212_POSITIVE
535	139	93	151	96	tfor:TF0448|3end_hypothetical_protein_467911..468061_POSITIVE
504	130	83	71	29	tfor:TF2922|3end_surface_antigen_BspA_3121538..3121688_POSITIVE
501	130	82	83	34	tfor:TF1585|3end_hypothetical_protein_1690610..1690760_POSITIVE
501	130	82	76	27	tfor:TF1584|3end_hypothetical_protein_1690603..1690753_POSITIVE
494	130	81	80	41	tfor:TF1762|3end_hypothetical_protein_1899648..1899798_POSITIVE
479	43	1	151	116	tfor:TF2840|3end_hypothetical_protein_3031289..3031439_POSITIVE
462	130	81	53	17	tfor:TF0018|3end_hypothetical_protein_12091..12241_POSITIVE
439	178	137	62	18	tfor:TF2284|3end_hypothetical_protein_2440846..2440996_POSITIVE
434	129	81	54	4	tfor:TF1743|3end_conserved_hypothetical_protein_1877909..1878059_POSITIVE
431	130	86	81	41	tfor:TF0344|3end_hypothetical_protein_366963..367113_POSITIVE
431	130	86	41	1	tfor:TF0343|3end_hypothetical_protein_366923..367073_POSITIVE
421	130	83	74	26	tfor:TF2350|3end_hypothetical_protein_2515364..2515514_POSITIVE
412	130	86	48	5	tfor:TF2169|3end_hypothetical_protein_2345354..2345504_POSITIVE
410	127	83	151	113	tfor:TF2025|3end_hypothetical_protein_2182180..2182330_POSITIVE
394	123	82	101	57	tfor:TF0340|3end_hypothetical_protein_364257..364407_POSITIVE
393	197	151	83	27	tfor:TF3160|3end_conserved_hypothetical_protein_3396258..3396408_POSITIVE