Origin IGS: tcagagcactcttttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcgaggcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacctgaggcccatggacaaaattaattgtcaattaaccattaatttgtcattcagagcgaagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaagggtgacgttcggattccgtgtacccggcataaccattaaccattgacaattaacaactgaattacgtcaggctttcagccctccgccgaggggggtgcctgttttcccaacgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagcaaacacctcaacacctcaacacctcaacgccccgaaggggttagctcgaccgaggcccatgggacgaacgccgagggcgttcgaggcgagattccttacttcgttcggaatgacaaagggggaggcgcactccctcgcatggtgtgtgtgagcctcctcgcatggtatgtgcgtgcttcgagttaaggctacacctgtcattcaatacacttttcactttctttcaaagcgcttcttttgttattcagagcgtcagcgaatccaatcgaatcaaaatatacttgctttttaaaaaccccctctcccttggtttccgcgctactacggggaagtctgtgcgggagaggaggaaaatgaaaaagagacaatgttgtttcaatatgagttattccgttta .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 taaacggaataactcatattgaaacaacattgtctctttttcattttcctcctctcccgcacagacttccccgtagtagcgcggaaaccaagggagagggggtttttaaaaagcaagtatattttgattcgattggattcgctgacgctctgaataacaaaagaagcgctttgaaagaaagtgaaaagtgtattgaatgacaggtgtagccttaactcgaagcacgcacataccatgcgaggaggctcacacacaccatgcgagggagtgcgcctccccctttgtcattccgaacgaagtaaggaatctcgcctcgaacgccctcggcgttcgtcccatgggcctcggtcgagctaaccccttcggggcgttgaggtgttgaggtgttgaggtgtttgctgaccgctgtaaaagccctgaaagggcacgttaattcagcccaatgtgcagcgaagcgttgggaaaacaggcacccccctcggcggagggctgaaagcctgacgtaattcagttgttaattgtcaatggttaatggttatgccgggtacacggaatccgaacgtcaccctttgtcattccgaacaccgtgaggaatctcgcctcgaaaagggaaaagattcttcgcttcgctctgaatgacaaattaatggttaattgacaattaattttgtccatgggcctcaggtggtgagccgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcaagcctcgcgaaggcgtgtgaagagcacgaagccttgactttttggttacttttgggtcaagccaaaagtgacagaaaagagtgctctga Mask Tandem Repeat Region ================================================ tcagagcactcttttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcgaggcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacctgaggcccatggacaaaattaattgtcaattaaccattaatttgtcattcagagcgaagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaagggtgacgttcggattccgtgtacccggcataaccattaaccattgacaattaacaactgaattacgtcaggctttcagccctccgccgaggggggtgcctgttttcccaacgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagcannnnnnnnnnnnnnnnnnnnnnnnnnngccccgaaggggttagctcgaccgaggcccatgggacgaacgccgagggcgttcgaggcgagattccttacttcgttcggaatgacaaagggggaggcgcactccctcgcatggtgtgtgtgagcctcctcgcatggtatgtgcgtgcttcgagttaaggctacacctgtcattcaatacacttttcactttctttcaaagcgcttcttttgttattcagagcgtcagcgaatccaatcgaatcaaaatatacttgctttttaaaaaccccctctcccttggtttccgcgctactacggggaagtctgtgcgggagaggaggaaaatgaaaaagagacaatgttgtttcaatatgagttattccgttta Find is-nt database================================================ Query_seq: TF2914:TF2915|TF2914:TF2915:hypothetical protein:hypothetical protein:->->:3109704..3110561 858 tcagagcactcttttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcgaggcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacctgaggcccatggacaaaattaattgtcaattaaccattaatttgtcattcagagcgaagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaagggtgacgttcggattccgtgtacccggcataaccattaaccattgacaattaacaactgaattacgtcaggctttcagccctccgccgaggggggtgcctgttttcccaacgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagcaaacacctcaacacctcaacacctcaacgccccgaaggggttagctcgaccgaggcccatgggacgaacgccgagggcgttcgaggcgagattccttacttcgttcggaatgacaaagggggaggcgcactccctcgcatggtgtgtgtgagcctcctcgcatggtatgtgcgtgcttcgagttaaggctacacctgtcattcaatacacttttcactttctttcaaagcgcttcttttgttattcagagcgtcagcgaatccaatcgaatcaaaatatacttgctttttaaaaaccccctctcccttggtttccgcgctactacggggaagtctgtgcgggagaggaggaaaatgaaaaagagacaatgttgtttcaatatgagttattccgttta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: TF2914:TF2915|TF2914:TF2915:hypothetical protein:hypothetical protein:->->:3109704..3110561 858 tcagagcactcttttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcgaggcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacctgaggcccatggacaaaattaattgtcaattaaccattaatttgtcattcagagcgaagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaagggtgacgttcggattccgtgtacccggcataaccattaaccattgacaattaacaactgaattacgtcaggctttcagccctccgccgaggggggtgcctgttttcccaacgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagcaaacacctcaacacctcaacacctcaacgccccgaaggggttagctcgaccgaggcccatgggacgaacgccgagggcgttcgaggcgagattccttacttcgttcggaatgacaaagggggaggcgcactccctcgcatggtgtgtgtgagcctcctcgcatggtatgtgcgtgcttcgagttaaggctacacctgtcattcaatacacttttcactttctttcaaagcgcttcttttgttattcagagcgtcagcgaatccaatcgaatcaaaatatacttgctttttaaaaaccccctctcccttggtttccgcgctactacggggaagtctgtgcgggagaggaggaaaatgaaaaagagacaatgttgtttcaatatgagttattccgttta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: TF2914:TF2915|TF2914:TF2915:hypothetical protein:hypothetical protein:->->:3109704..3110561 858 tcagagcactcttttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcgaggcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacctgaggcccatggacaaaattaattgtcaattaaccattaatttgtcattcagagcgaagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaagggtgacgttcggattccgtgtacccggcataaccattaaccattgacaattaacaactgaattacgtcaggctttcagccctccgccgaggggggtgcctgttttcccaacgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagcaaacacctcaacacctcaacacctcaacgccccgaaggggttagctcgaccgaggcccatgggacgaacgccgagggcgttcgaggcgagattccttacttcgttcggaatgacaaagggggaggcgcactccctcgcatggtgtgtgtgagcctcctcgcatggtatgtgcgtgcttcgagttaaggctacacctgtcattcaatacacttttcactttctttcaaagcgcttcttttgttattcagagcgtcagcgaatccaatcgaatcaaaatatacttgctttttaaaaaccccctctcccttggtttccgcgctactacggggaagtctgtgcgggagaggaggaaaatgaaaaagagacaatgttgtttcaatatgagttattccgttta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 tcagagcactcttttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcgaggcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacctgaggcccatggacaaaattaattgtcaattaaccattaatttgtcattcagagcgaagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaagggtgacgttcggattccgtgtacccggcataaccattaaccattgacaattaacaactgaattacgtcaggctttcagccctccgccgaggggggtgcctgttttcccaacgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagcaaacacctcaacacctcaacacctcaacgccccgaaggggttagctcgaccgaggcccatgggacgaacgccgagggcgttcgaggcgagattccttacttcgttcggaatgacaaagggggaggcgcactccctcgcatggtgtgtgtgagcctcctcgcatggtatgtgcgtgcttcgagttaaggctacacctgtcattcaatacacttttcactttctttcaaagcgcttcttttgttattcagagcgtcagcgaatccaatcgaatcaaaatatacttgctttttaaaaaccccctctcccttggtttccgcgctactacggggaagtctgtgcgggagaggaggaaaatgaaaaagagacaatgttgtttcaatatgagttattccgttta Predict ORF larger than 30AA ================================================ Protein_Len: 44 Strand: + Start: 63 End: 194 .............................................................. M L F T R L R E A C R S E N Q V T R F A S D S L I F F R P A R C S V G S P P E A H G Q N ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 60 Strand: + Start: 148 End: 327 ................................................................................................................................................... M L A A P S A H H L R P M D K I N C Q L T I N L S F R A K R R I F S L F E A R F L T V F G M T K G D V R I P C T R H N H ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 30 Strand: + Start: 520 End: 609 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M G R T P R A F E A R F L T S F G M T K G E A H S L A W C V ......................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 348 End: 644 ........................................................................................................................................................................................................................................................................................................................................................... M N Y V R L S A L R R G G C L F S Q R F A A H W A E L T C P F R A F T A V S K H L N T S T P Q R P E G V S S T E A H G T ...................................................................................................................................................................................................................... Protein_Len: 41 Strand: + Start: 628 End: 750 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M C V L R V K A T P V I Q Y T F H F L S K R F F C Y S E R Q R I Q S N Q N I L A F ............................................................................................................ Protein_Len: 50 Strand: + Start: 666 End: 815 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M H F S L S F K A L L L L F R A S A N P I E S K Y T C F L K T P S P L V S A L L R G S L C G R G G K ........................................... Protein_Len: 60 Strand: + Start: 605 End: 856 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M C E P P R M V C A C F E L R L H L S F N T L F T F F Q S A S F V I Q S V S E S N R I K I Y L L F K N P L S L G F R A T .. Protein_Len: 45 Strand: - Start: 709 End: 843 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L T L S D L R I L I Y K S K L F G R E R P K R A V V P F D T R S L L F I F F L C H Q K L M ............... Protein_Len: 60 Strand: - Start: 662 End: 850 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... K E S E K L A S R K N N L A D A F G I S D F Y V Q K K F V G E G K T E A S S R P L R H P L P P F H F L S L T T E I H T M ........ Protein_Len: 58 Strand: - Start: 505 End: 678 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ S S R P G H S S R R P R E L R S E K S R E S H C L P L R V G E C P T H S G G R M T H A H K S N L S C R D N L V S K M .................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 480 End: 662 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... R L A G F P N A R G L G M P R V G L A N S A L N R V E N P I V F P S A C E R A H H T H A E E C P I H T S R T L A V G T M .................................................................................................................................................................................................... Protein_Len: 40 Strand: - Start: 356 End: 475 ................................................................................................................................................................................................................................................................................................................................................................... T L S E A R R R P P H R N E W R K A A C Q A S N V H G K L A K V A T L L C R L M ............................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 35 Strand: - Start: 223 End: 327 .............................................................................................................................................................................................................................. E S R L S S D K G K E L R S E E R H E S H C L T V N P N R T G P M V M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 34 Strand: - Start: 204 End: 305 ........................................................................................................................................................................................................... N V M L K D N L A F R L I K E R K S A L N R V T N P I V F P S T R M ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 44 Strand: - Start: 73 End: 204 ........................................................................ V G E R P K C T P F D P L E S R K P C G S K R E G Q E S S R R S V V Q P G H V F N I T M .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 35 Strand: - Start: 3 End: 107 .. S C E K R D S K A Q G L L L W F T L A E H E E C A K A L S A P R F I M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... tcagagcactcttttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcgaggcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacctgaggcccatggacaaaattaattgtcaattaaccattaatttgtcattcagagcgaagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaagggtgacgttcggattccgtgtacccggcataaccattaaccattgacaattaacaactgaattacgtcaggctttcagccctccgccgaggggggtgcctgttttcccaacgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagcaaacacctcaacacctcaacacctcaacgccccgaaggggttagctcgaccgaggcccatgggacgaacgccgagggcgttcgaggcgagattccttacttcgttcggaatgacaaagggggaggcgcactccctcgcatggtgtgtgtgagcctcctcgcatggtatgtgcgtgcttcgagttaaggctacacctgtcattcaatacacttttcactttctttcaaagcgcttcttttgttattcagagcgtcagcgaatccaatcgaatcaaaatatacttgctttttaaaaaccccctctcccttggtttccgcgctactacggggaagtctgtgcgggagaggaggaaaatgaaaaagagacaatgttgtttcaatatgagttattccgttta Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ tcagagcactcttttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcgaggcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacctgaggcccatggacaaaattaattgtcaattaaccattaatttgtcattcagagcgaagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaagggtgacgttcggattccgtgtacccggcataaccattaaccattgacaattaacaactgaattacgtcaggctttcagccctccgccgaggggggtgcctgttttcccaacgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagcaaacacctcaacacctcaacacctcaacgccccgaaggggttagctcgaccgaggcccatgggacgaacgccgagggcgttcgaggcgagattccttacttcgttcggaatgacaaagggggaggcgcactccctcgcatggtgtgtgtgagcctcctcgcatggtatgtgcgtgcttcgagttaaggctacacctgtcattcaatacacttttcactttctttcaaagcgcttcttttgttattcagagcgtcagcgaatccaatcgaatcaaaatatacttgctttttaaaaaccccctctcccttggtttccgcgctactacggggaagtctgtgcgggagaggaggaaaatgaaaaagagacaatgttgtttcaatatgagttattccgttta Predict TransTerm conf > 70================================================ TransTerm Strand: + Conf: 77 HP_score: -9.1 Tail_Score: -4.08767 Start: 433 End: 445 Full_Region: GGGCTGAATTAACGT GCCCT TTC AGGGC TTTTACAGCGGTCAG ................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTTTCAGGGC............................................................................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: - Conf: 66 HP_score: -5.9 Tail_Score: -4.05446 Start: 579 End: 597 Full_Region: tcacacacaccatgc gagggag tgcgc ctccccc tttgtcattccgaac ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagggagtgcgcctccccc..................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 56 HP_score: -6.6 Tail_Score: -3.02946 Start: 580 End: 620 Full_Region: acgcacataccatgc gaggaggctcacacacac catgc gagggagtgcgcctcccc ctttgtcattccgaa ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gaggaggctcacacacaccatgcgagggagtgcgcctcccc.............................................................................................................................................................................................................................................. Find igs database================================================ Query_seq: TF2914:TF2915|TF2914:TF2915:hypothetical protein:hypothetical protein:->->:3109704..3110561 858 tcagagcactcttttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcgaggcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacctgaggcccatggacaaaattaattgtcaattaaccattaatttgtcattcagagcgaagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaagggtgacgttcggattccgtgtacccggcataaccattaaccattgacaattaacaactgaattacgtcaggctttcagccctccgccgaggggggtgcctgttttcccaacgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagcaaacacctcaacacctcaacacctcaacgccccgaaggggttagctcgaccgaggcccatgggacgaacgccgagggcgttcgaggcgagattccttacttcgttcggaatgacaaagggggaggcgcactccctcgcatggtgtgtgtgagcctcctcgcatggtatgtgcgtgcttcgagttaaggctacacctgtcattcaatacacttttcactttctttcaaagcgcttcttttgttattcagagcgtcagcgaatccaatcgaatcaaaatatacttgctttttaaaaaccccctctcccttggtttccgcgctactacggggaagtctgtgcgggagaggaggaaaatgaaaaagagacaatgttgtttcaatatgagttattccgttta Intra-Species Hit: Count: 33 Min: 1 Max: 858 Len: 858 Subject: tfor_TF2914_TF2915|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[3109704,3110561]|858 HSP 1 e-value: 0.0 bit: 1701.0 Len: 858 Query Start:1 Query End:858 Subject Strand: POSITIVE Subject Start: 1 Subject End: 858 tcagagcactcttttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcgaggcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacctgaggcccatggacaaaattaattgtcaattaaccattaatttgtcattcagagcgaagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaagggtgacgttcggattccgtgtacccggcataaccattaaccattgacaattaacaactgaattacgtcaggctttcagccctccgccgaggggggtgcctgttttcccaacgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagcaaacacctcaacacctcaacacctcaacgccccgaaggggttagctcgaccgaggcccatgggacgaacgccgagggcgttcgaggcgagattccttacttcgttcggaatgacaaagggggaggcgcactccctcgcatggtgtgtgtgagcctcctcgcatggtatgtgcgtgcttcgagttaaggctacacctgtcattcaatacacttttcactttctttcaaagcgcttcttttgttattcagagcgtcagcgaatccaatcgaatcaaaatatacttgctttttaaaaaccccctctcccttggtttccgcgctactacggggaagtctgtgcgggagaggaggaaaatgaaaaagagacaatgttgtttcaatatgagttattccgttta tcagagcactcttttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcgaggcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacctgaggcccatggacaaaattaattgtcaattaaccattaatttgtcattcagagcgaagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaagggtgacgttcggattccgtgtacccggcataaccattaaccattgacaattaacaactgaattacgtcaggctttcagccctccgccgaggggggtgcctgttttcccaacgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagcaaacacctcaacacctcaacacctcaacgccccgaaggggttagctcgaccgaggcccatgggacgaacgccgagggcgttcgaggcgagattccttacttcgttcggaatgacaaagggggaggcgcactccctcgcatggtgtgtgtgagcctcctcgcatggtatgtgcgtgcttcgagttaaggctacacctgtcattcaatacacttttcactttctttcaaagcgcttcttttgttattcagagcgtcagcgaatccaatcgaatcaaaatatacttgctttttaaaaaccccctctcccttggtttccgcgctactacggggaagtctgtgcgggagaggaggaaaatgaaaaagagacaatgttgtttcaatatgagttattccgttta Subject: tfor_TF2920_TF2921|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[3117231,3118637]|1407 HSP 1 e-value: 1.0E-100 bit: 369.0 Len: 281 Query Start:13 Query End:293 Subject Strand: POSITIVE Subject Start: 207 Subject End: 488 ............tttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcgaggcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacctgaggcccatggacaaaattaattgtcaattaaccattaatttgtcattcagagcg-aagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............tttctgttacttttggcttgacccaaaagtaacccaaaggtcaaggcttcgtgcgcttcacacgccttcgcgacacttgcaggtcggaaaatcaggtaactcgcttcgcttcagacagcctgattttctttcgccctgctcgctgctccatcggctcaccgcccgaggcccatggacgaaattaattgtcaattaaccattaatttgtcattcagagcgtaagcgaagaatctctttcctctttcccacgggattcctcactgcgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-19 bit: 97.6 Len: 96 Query Start:358 Query End:453 Subject Strand: POSITIVE Subject Start: 511 Subject End: 611 .....................................................................................................................................................................................................................................................................................................................................................................tcaggctttcagccctccgccgaggggggtgcctgttttcccaa-----cgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacag..................................................................................................................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................................................................tcaggctttcagccctccgccgagggggtcgccctgtttcccaacgcttcgcttcgctgcacattggactgaattaacgcgccctttcagggctgttacag..................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 4.0E-17 bit: 91.7 Len: 50 Query Start:471 Query End:520 Subject Strand: POSITIVE Subject Start: 976 Subject End: 1025 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aacacctcaacacctcaacgccccgaaggggttagctcgaccgaggccca.................................................................................................................................................................................................................................................................................................................................................. ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aacacctcaacacctcaacgccccgaaggggttagctcgcccgaggccca.................................................................................................................................................................................................................................................................................................................................................. HSP 4 e-value: 4.0E-14 bit: 81.8 Len: 65 Query Start:402 Query End:466 Subject Strand: POSITIVE Subject Start: 883 Subject End: 947 .................................................................................................................................................................................................................................................................................................................................................................................................................cgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagcaaaca........................................................................................................................................................................................................................................................................................................................................................................................................ .................................................................................................................................................................................................................................................................................................................................................................................................................cgcttcgctgcgcattgggctgaattaatacgccctttcagggctcttacaacggtcagcaaaca........................................................................................................................................................................................................................................................................................................................................................................................................ HSP 5 e-value: 6.0E-13 bit: 77.8 Len: 78 Query Start:216 Query End:293 Subject Strand: POSITIVE Subject Start: 729 Subject End: 807 .......................................................................................................................................................................................................................tttgtcattcagagcg-aagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................tttgtcattcagagcgtaagcgaagaatctcttccctttcccccgtgagattcctcactgcgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2500_TF2501|ABC transporter, ATP-binding protein:DNA mismatch repair protein|POSITIVE:POSITIVE|[2675363,2676419]|1057 HSP 1 e-value: 9.0E-83 bit: 309.0 Len: 192 Query Start:14 Query End:205 Subject Strand: NEGATIVE Subject Start: 527 Subject End: 718 .............ttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcgaggcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacctgaggcccatggacaaaattaattgtcaat............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. .............ttctgtcacttttggcttgacccaaaagtaaccaaaaggtcaaggcttcgtgcgcttcacacgccttcgcgacgctcgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcagctcaccgcccgaggcccatcgacgaaattaattgtcaat............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 1.0E-44 bit: 182.0 Len: 155 Query Start:328 Query End:482 Subject Strand: NEGATIVE Subject Start: 176 Subject End: 334 .......................................................................................................................................................................................................................................................................................................................................taaccattgacaattaacaactgaattacgtcaggctttcagccctccgccgaggggggtgcctgttttcccaacgcttcgctgcac-----attgggctgaattaacgtgccctttcagggcttttacagcggtcagcaaacacctcaacacctcaaca........................................................................................................................................................................................................................................................................................................................................................................................ .......................................................................................................................................................................................................................................................................................................................................taacaattgacaattaacaactgaattacgtcaggctttcatccctccgccgagggggc-gcctgttttcccaacgcttcgcttcgctctgcattgggctgaattaatgcgccctttcagggcttttacaacggtcagcaaacagatcaacacctcaaca........................................................................................................................................................................................................................................................................................................................................................................................ HSP 3 e-value: 6.0E-10 bit: 67.9 Len: 49 Query Start:196 Query End:244 Subject Strand: NEGATIVE Subject Start: 721 Subject End: 770 ...................................................................................................................................................................................................aattgtcaattaaccattaatttgtcattcagagcg-aagcgaagaatct...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................aattgacaattaaccattaatatgtcattcagagcgtaagcgaagaatct...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 2.0E-9 bit: 65.9 Len: 49 Query Start:297 Query End:345 Subject Strand: NEGATIVE Subject Start: 757 Subject End: 805 ........................................................................................................................................................................................................................................................................................................cgttcggattccgtgtacccggcataaccattaaccattgacaattaac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................................................................................................................................................................cgttcggataccgtgtacccggcataacaattgacaattgacaattaac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: tfor_TF0685_TF0686|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[731193,732338]|1146 HSP 1 e-value: 1.0E-75 bit: 285.0 Len: 176 Query Start:9 Query End:184 Subject Strand: POSITIVE Subject Start: 204 Subject End: 379 ........ctcttttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcgaggcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacctgaggccca.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ........ctcttttttgtcacttttggcttgaccaaaaagtaacccaaaggtcaaggcttcgtgcgcttcacacgccttcgcgacgcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccgcccgaggccca.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 1.0E-35 bit: 153.0 Len: 183 Query Start:300 Query End:482 Subject Strand: POSITIVE Subject Start: 712 Subject End: 900 ...........................................................................................................................................................................................................................................................................................................tcggattccgtgtacccggcataaccattaaccattgacaattaacaactgaattacgtcaggctttcagccctccgccgagggggg-tgcctgttttcccaacgcttcgctgc-----acattgggctgaattaacgtgccctttcagggcttttacagcggtcagcaaacacctcaacacctcaaca........................................................................................................................................................................................................................................................................................................................................................................................ ...........................................................................................................................................................................................................................................................................................................tcggataccgtgtaccacgcataacaattgacaattaaccattaacaattgaattacgtcaggcttacagccctccgccgagatgcgatgccttttttcccaacgcttcgctgcgctccacattgggctgaattaatgcgccctttcagggctgttacaacggtcagcaaacaaatcaacaactcaaca........................................................................................................................................................................................................................................................................................................................................................................................ HSP 3 e-value: 2.0E-25 bit: 119.0 Len: 88 Query Start:202 Query End:289 Subject Strand: POSITIVE Subject Start: 540 Subject End: 627 .........................................................................................................................................................................................................caattaaccattaatttgtcattcagagcgaagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaa......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .........................................................................................................................................................................................................caattgaccattaatttgtcattcagagcgaagcgatgaatctcttccctttaccccgcgagattcctcacggtgttcggaatgacaa......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 2.0E-16 bit: 89.7 Len: 49 Query Start:196 Query End:244 Subject Strand: POSITIVE Subject Start: 157 Subject End: 205 ...................................................................................................................................................................................................aattgtcaattaaccattaatttgtcattcagagcgaagcgaagaatct...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................aattgacaattaaccattaatttgtcattcagagcgaagcgaagaatct...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2922_TF2923|surface antigen BspA:hypothetical protein|POSITIVE:POSITIVE|[3121599,3122307]|709 HSP 1 e-value: 8.0E-74 bit: 280.0 Len: 169 Query Start:21 Query End:189 Subject Strand: POSITIVE Subject Start: 159 Subject End: 326 ....................acttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcgaggcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacctgaggcccatggac............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ....................acttttggcttgacccaaaagtaaccaaaaggtcaaggcttcgtgcgcttcacacgccttcgcgacgctcgcaggtcggaaaatcaggtaactcgcttcgc-tcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacccgaggcccatggac............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 4.0E-14 bit: 81.8 Len: 92 Query Start:202 Query End:293 Subject Strand: POSITIVE Subject Start: 406 Subject End: 498 .........................................................................................................................................................................................................caattaaccattaatttgtcattcagagcg-aagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .........................................................................................................................................................................................................caattaaccattaatttgtcattcagagcgtaagcgaagaatctctttcctcttccccacgggattcctcactacgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 4.0E-11 bit: 71.9 Len: 48 Query Start:197 Query End:244 Subject Strand: POSITIVE Subject Start: 566 Subject End: 613 ....................................................................................................................................................................................................attgtcaattaaccattaatttgtcattcagagcgaagcgaagaatct...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................attgacaattaaccattaatttgtcattcagcgcgaagcgatgaatct...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 6.0E-10 bit: 67.9 Len: 53 Query Start:358 Query End:410 Subject Strand: POSITIVE Subject Start: 20 Subject End: 73 .....................................................................................................................................................................................................................................................................................................................................................................tcaggctttcagccctccgccgaggggggtg-cctgttttcccaacgcttcgct................................................................................................................................................................................................................................................................................................................................................................................................................................................................ .....................................................................................................................................................................................................................................................................................................................................................................tcaggctttcagccctccgccgaggggggcgccctttttccccaacgcttcgct................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 5 e-value: 5.0E-7 bit: 58.0 Len: 33 Query Start:313 Query End:345 Subject Strand: POSITIVE Subject Start: 546 Subject End: 578 ........................................................................................................................................................................................................................................................................................................................acccggcataaccattaaccattgacaattaac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................................................................................................................................................................................acccggcataacaattaaccattgacaattaac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: tfor_TF2664_TF2666|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2841791,2841957]|167 HSP 1 e-value: 4.0E-54 bit: 214.0 Len: 156 Query Start:50 Query End:205 Subject Strand: POSITIVE Subject Start: 1 Subject End: 155 .................................................aagtcaaggcttcgtgctcttcacacgccttcgcgaggcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacctgaggcccatggacaaaattaattgtcaat............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. .................................................aagtcaaggcttcgtgcgcttcacacaccttcgcgaggcttgcaggtcagaaaatcaggtgactcgcttggct-cggacagcctgattttctttcgccctgctcgcagctccgtcggctcaccgcccgaggcccaaggacgaaattaattgtcaat............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: tfor_TF1838_TF1839|tRNA/rRNA methyltransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1988806,1989486]|681 HSP 1 e-value: 4.0E-51 bit: 204.0 Len: 194 Query Start:12 Query End:205 Subject Strand: NEGATIVE Subject Start: 252 Subject End: 436 ...........ttttctgtcacttttggcttgacccaaaa-gtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcgaggcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacctgaggcccatggacaaaattaattgtcaat............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ...........ttttccgttacttttggcttgacccaaaaagtaacccaaaggtcaaggcttcg---------cacgccttcgcgacgcttgcaggtcggaaaatcaggtaactcgcttggct-cggacagcctgattttctttcgccctgctcgctgcttcgtcggctcaccgcccgaggcccatggacgaaataaattgtcaat............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 6.0E-19 bit: 97.6 Len: 96 Query Start:197 Query End:292 Subject Strand: NEGATIVE Subject Start: 104 Subject End: 200 ....................................................................................................................................................................................................attgtcaattaaccattaatttgtcattcagagcg-aagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaagg...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................attgacaattaacaattaatttgtcattcagagcgtaagcgaagaatctctttcttttactccgcgggattcctcacggtgttcggaatgacaaagg...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 4.0E-11 bit: 71.9 Len: 40 Query Start:308 Query End:347 Subject Strand: NEGATIVE Subject Start: 186 Subject End: 225 ...................................................................................................................................................................................................................................................................................................................cgtgtacccggcataaccattaaccattgacaattaacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................................................................................................cgtgtacccggcataacaattaaccattgacaattaacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF0018_TF0019|hypothetical protein:heat shock protein ClpB|POSITIVE:POSITIVE|[12152,12589]|438 HSP 1 e-value: 1.0E-47 bit: 192.0 Len: 169 Query Start:321 Query End:489 Subject Strand: POSITIVE Subject Start: 1 Subject End: 176 ................................................................................................................................................................................................................................................................................................................................taaccattaaccattgacaattaacaactgaattacgtcaggctttcagccctccgccgagggggg--tgcctgttttcccaa-----cgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagcaaacacctcaacacctcaacacctcaac................................................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................................................................................................................................taaccattaaccattgaccattaacaactgaattacgtcaggctttcagccctccgctgagggggggcgcccttttttcccaacgcttcgcttcgctccacattgggctgaattaatgcgccctttcagggctgttacaacggtcagcaaacacctcaacaattcaacacctcaac................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 1.0E-17 bit: 93.7 Len: 75 Query Start:463 Query End:537 Subject Strand: POSITIVE Subject Start: 182 Subject End: 256 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................aacacctcaacacctcaacacctcaacgccccgaaggggttagctcgaccgaggcccatgggacgaacgccgagg................................................................................................................................................................................................................................................................................................................................. ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................aacacctcaacgtctcaacacctcaatgccccgaaagggttagcccgcccgaggcccaagggacgaacgccgagg................................................................................................................................................................................................................................................................................................................................. HSP 3 e-value: 2.0E-6 bit: 56.0 Len: 28 Query Start:463 Query End:490 Subject Strand: POSITIVE Subject Start: 166 Subject End: 193 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................aacacctcaacacctcaacacctcaacg................................................................................................................................................................................................................................................................................................................................................................................ ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................aacacctcaacacctcaacacctcaacg................................................................................................................................................................................................................................................................................................................................................................................ Subject: tfor_TF2665_TF2667|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2842296,2842534]|239 HSP 1 e-value: 6.0E-47 bit: 190.0 Len: 140 Query Start:50 Query End:189 Subject Strand: POSITIVE Subject Start: 1 Subject End: 139 .................................................aagtcaaggcttcgtgctcttcacacgccttcgcgaggcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacctgaggcccatggac............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. .................................................aagtcaaggcttcgtgcgcttcacacaccttcgcgaggcttgcaggtcagaaaatcaggtgactcgcttggctt-ggacagcctgattttctttcgccctgctcgcagctccgtcggctcaccgcccgaggcccaaggac............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-6 bit: 56.0 Len: 40 Query Start:308 Query End:347 Subject Strand: POSITIVE Subject Start: 189 Subject End: 228 ...................................................................................................................................................................................................................................................................................................................cgtgtacccggcataaccattaaccattgacaattaacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaaccattgacaattaacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1848_TF1850|conserved hypothetical protein:Na+/H+-exchanging protein|POSITIVE:POSITIVE|[1998005,1998681]|677 HSP 1 e-value: 5.0E-44 bit: 180.0 Len: 150 Query Start:297 Query End:446 Subject Strand: NEGATIVE Subject Start: 78 Subject End: 231 ........................................................................................................................................................................................................................................................................................................cgttcggattccgtgtacccggcataaccattaaccattgacaattaacaactgaattacgtcaggctttcagccctccgccgaggggggtgcctgttttcccaacgcttcgctgc-----acattgggctgaattaacgtgccctttcagggct............................................................................................................................................................................................................................................................................................................................................................................................................................ ........................................................................................................................................................................................................................................................................................................cgttcggattccgtgtacccggcataacaattaaccattgacaattaacaattgaattacgtcaggctttcagccctccgctgagggggtcgc-tctttccccaacacttcgctgcgctccacattgggctgaattaacgcgccctttcagggct............................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-23 bit: 111.0 Len: 87 Query Start:204 Query End:290 Subject Strand: NEGATIVE Subject Start: 455 Subject End: 542 ...........................................................................................................................................................................................................attaaccattaatttgtcattcagagcga-agcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaa........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ...........................................................................................................................................................................................................attaaccattaatttgtcattcagagcgtcagcgaagaatctcttccctttcccctgcgagattcctcacggtgttcggaatgacaaa........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 3 e-value: 2.0E-12 bit: 75.8 Len: 46 Query Start:300 Query End:345 Subject Strand: NEGATIVE Subject Start: 537 Subject End: 582 ...........................................................................................................................................................................................................................................................................................................tcggattccgtgtacccggcataaccattaaccattgacaattaac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ...........................................................................................................................................................................................................................................................................................................tcggattccgtgtacccggcataacaattaaccattgaccattaac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: tfor_TF2921_TF2922|hypothetical protein:surface antigen BspA|POSITIVE:POSITIVE|[3118851,3119261]|411 HSP 1 e-value: 8.0E-43 bit: 176.0 Len: 144 Query Start:202 Query End:345 Subject Strand: POSITIVE Subject Start: 256 Subject End: 400 .........................................................................................................................................................................................................caattaaccattaatttgtcattcagagcg-aagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaagggtgacgttcggattccgtgtacccggcataaccattaaccattgacaattaac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. .........................................................................................................................................................................................................caattaaccattaatttgtcattcagagcgtaagcgaagaatctcttccctcttccccgtgagattcctcactacgttcggaatgacaaagggcggcgttcggattccgtgtacccggcataaccattaacaattgacaattaac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-18 bit: 95.6 Len: 103 Query Start:202 Query End:304 Subject Strand: POSITIVE Subject Start: 84 Subject End: 186 .........................................................................................................................................................................................................caattaaccattaatttgtcattcagagcg-aagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaagggtgacgttcgga.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .........................................................................................................................................................................................................caattaaccattaatttgtcattcagagcgtaagcgaagaatctttttcc-tttccccacgggattcctcactacgttcggaatgacaaagggtggcgttcgga.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2668_TF2670|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2842794,2842918]|125 HSP 1 e-value: 1.0E-38 bit: 163.0 Len: 126 Query Start:78 Query End:203 Subject Strand: POSITIVE Subject Start: 1 Subject End: 125 .............................................................................cttcgcgaggcttgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcggctcaccacctgaggcccatggacaaaattaattgtca............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................cttcgcgaggcttgcaggtcagaaaatcaggtgactcgcttggct-cggacagcctgattttctttcgacctgctcgcagctccgtcggctcaccgcccgaggcccaaggacgaaattaattgtca............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1762_TF1763|hypothetical protein:K+-dependent Na+/Ca+ exchanger related-protein|POSITIVE:POSITIVE|[1899709,1900545]|837 HSP 1 e-value: 8.0E-34 bit: 147.0 Len: 141 Query Start:349 Query End:489 Subject Strand: POSITIVE Subject Start: 2 Subject End: 152 ............................................................................................................................................................................................................................................................................................................................................................tgaattacgtcaggctttcagccctccgccgaggggggtg----cctgttttcccaacgct-----tcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagc-aaacacctcaacacctcaacacctcaac................................................................................................................................................................................................................................................................................................................................................................................. ............................................................................................................................................................................................................................................................................................................................................................tgaattacgtcaggctttcagccctccgccgagggggagggacgccttttttcccaacgcttcgcttcgctgcacattgggctgaattaacgcgccctttcagggcttttacagcgggcagctaaacacctcaacaattcaacaactcaac................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 4.0E-20 bit: 101.0 Len: 59 Query Start:462 Query End:520 Subject Strand: POSITIVE Subject Start: 173 Subject End: 231 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................aaacacctcaacacctcaacacctcaacgccccgaaggggttagctcgaccgaggccca.................................................................................................................................................................................................................................................................................................................................................. .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................aaacatctcaacacctcaacacctcaacgccccgaaggggttagctcgcccgaggccca.................................................................................................................................................................................................................................................................................................................................................. Subject: tfor_TF2823_TF2824|TPR-containing protein:nucleoside-transporting protein nupG|POSITIVE:POSITIVE|[3014398,3014840]|443 HSP 1 e-value: 3.0E-33 bit: 145.0 Len: 101 Query Start:202 Query End:302 Subject Strand: NEGATIVE Subject Start: 92 Subject End: 192 .........................................................................................................................................................................................................caattaaccattaatttgtcattcagagcgaagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaagggtgacgttcg............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ .........................................................................................................................................................................................................caattaaccattaatttgtcattcagagcgaagcgaagaatctcttcccttttccccgcgagattcctcactgcgttcggaatgacaaagggtggcgttcg............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 1.0E-7 bit: 60.0 Len: 49 Query Start:414 Query End:462 Subject Strand: NEGATIVE Subject Start: 329 Subject End: 378 .............................................................................................................................................................................................................................................................................................................................................................................................................................cattgggctgaattaacgt-gccctttcagggcttttacagcggtcagca............................................................................................................................................................................................................................................................................................................................................................................................................ .............................................................................................................................................................................................................................................................................................................................................................................................................................cattgggctgaattaacacagccctttcagggctgttacagcggtcagca............................................................................................................................................................................................................................................................................................................................................................................................................ HSP 3 e-value: 5.0E-7 bit: 58.0 Len: 49 Query Start:297 Query End:345 Subject Strand: NEGATIVE Subject Start: 185 Subject End: 233 ........................................................................................................................................................................................................................................................................................................cgttcggattccgtgtacccggcataaccattaaccattgacaattaac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................................................................................................................................................................cgttcggataccgtgtacccggcataacaattaacacctgacaattaac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 4 e-value: 8.0E-6 bit: 54.0 Len: 35 Query Start:547 Query End:581 Subject Strand: NEGATIVE Subject Start: 101 Subject End: 135 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gcgagattccttacttcgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gcgagattcctcactgcgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................... Subject: tfor_TF2438_TF2439|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[2616218,2616519]|302 HSP 1 e-value: 7.0E-31 bit: 137.0 Len: 124 Query Start:337 Query End:460 Subject Strand: POSITIVE Subject Start: 97 Subject End: 225 ................................................................................................................................................................................................................................................................................................................................................acaattaacaactgaattacgtcaggctttcagccctccgccgaggggggtgcctgttttcccaacgcttcgctgc-----acattgggctgaattaacgtgccctttcagggcttttacagcggtcag.............................................................................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................................................................................................................................................acaattaacaattaaattatgtcaggctttcagccctccgctgagggggtcgcctgttttcccaacgcttcgcttcgctacacattgggctgaattaatgcgccctttcagggcttttacagcagtcag.............................................................................................................................................................................................................................................................................................................................................................................................................. Subject: tfor_TF1187_TF1188|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1269933,1270295]|363 HSP 1 e-value: 7.0E-28 bit: 127.0 Len: 80 Query Start:9 Query End:88 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 80 ........ctcttttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcgaggc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ........ctcttttccgttacttttggcttgacccaaaagtaaccaaaaggtcaaggcttcgtgcgcttcacacgccttcgcgaggc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 1.0E-7 bit: 60.0 Len: 41 Query Start:204 Query End:244 Subject Strand: NEGATIVE Subject Start: 79 Subject End: 120 ...........................................................................................................................................................................................................attaaccattaatttgtcattcagagcg-aagcgaagaatct...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...........................................................................................................................................................................................................attaaccattaatttgtcattcagagcgtaagcgatgaatct...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2998_TF2999|surface antigen BspA:conserved hypothetical protein|POSITIVE:POSITIVE|[3215212,3215705]|494 HSP 1 e-value: 1.0E-26 bit: 123.0 Len: 191 Query Start:319 Query End:509 Subject Strand: POSITIVE Subject Start: 170 Subject End: 373 ..............................................................................................................................................................................................................................................................................................................................cataaccattaaccattgacaattaacaactgaattacgtcaggctttcagccctccgccgaggggggtgcc-tgttttcccaacgcttcgctgcac-----attgggctgaattaacgtgccctttcagggcttttacagcggtcagca-------aacacctcaacacctcaacacctcaacgccccgaaggggttagctcg............................................................................................................................................................................................................................................................................................................................................................. ..............................................................................................................................................................................................................................................................................................................................cataacaattgacaattaaccattaaccattgaattatgtcaggctttcagccctccgccgagggggtcgccctgttttcccaacgcttcgcttcgctacgcattgggctgaattattacgccctttcagggctcttacagctgtcagcaatcagccaacaattcaacacctaaacccctcaacgccccgaaggggttagctcg............................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-12 bit: 75.8 Len: 46 Query Start:21 Query End:66 Subject Strand: POSITIVE Subject Start: 60 Subject End: 105 ....................acttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgc........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ....................acttttggcttgacccaaaagtaacccaaaggtcaaggcttcgtgc........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: tfor_TF2745_TF2746|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2928008,2928135]|128 HSP 1 e-value: 1.0E-26 bit: 123.0 Len: 94 Query Start:13 Query End:106 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 94 ............tttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcgaggcttgcaggtcggaaaatca................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ............tttctgtcacttttggcttgacccaaaagtaaccaaaagatcaaggcttcgtgcgcttcgcacgccctcgtgacgcttgcaggccggaaaatca................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 2.0E-9 bit: 65.9 Len: 33 Query Start:212 Query End:244 Subject Strand: NEGATIVE Subject Start: 96 Subject End: 128 ...................................................................................................................................................................................................................ttaatttgtcattcagagcgaagcgaagaatct...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................ttaatttgtcattcagagcgaagcgaagaatct...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2996_TF2997|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[3211182,3211547]|366 HSP 1 e-value: 4.0E-26 bit: 121.0 Len: 85 Query Start:1 Query End:85 Subject Strand: POSITIVE Subject Start: 280 Subject End: 363 tcagagcactcttttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcga..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... tcagagcactcttt-ctgttacttttggcttgacccaaaagtaacccaaaggtcaaggcttcgtgcgcttcacacgccttcgcga..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 56.0 Len: 40 Query Start:308 Query End:347 Subject Strand: POSITIVE Subject Start: 228 Subject End: 267 ...................................................................................................................................................................................................................................................................................................................cgtgtacccggcataaccattaaccattgacaattaacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaaccattgacaattaacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2515_TF2517|outer membrane protein, TonB dependent receptor:hypothetical protein|POSITIVE:POSITIVE|[2694926,2695228]|303 HSP 1 e-value: 2.0E-25 bit: 119.0 Len: 88 Query Start:402 Query End:489 Subject Strand: NEGATIVE Subject Start: 176 Subject End: 263 .................................................................................................................................................................................................................................................................................................................................................................................................................cgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagcaaacacctcaacacctcaacacctcaac................................................................................................................................................................................................................................................................................................................................................................................. .................................................................................................................................................................................................................................................................................................................................................................................................................cgcttcgctccacattgggctgaattaatgcgccctttcagggcttttacaacggtcagcaaacagatcaacaactcaacacctcaac................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-9 bit: 65.9 Len: 41 Query Start:82 Query End:122 Subject Strand: NEGATIVE Subject Start: 255 Subject End: 295 .................................................................................gcgaggcttgcaggtcggaaaatcaggtaactcgcttcgct................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ .................................................................................gcgacgctcgcaggtcggaaaatcaggtaactcgcttcgct................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: tfor_TF1659_TF1660|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1775270,1775408]|139 HSP 1 e-value: 1.0E-23 bit: 113.0 Len: 77 Query Start:9 Query End:85 Subject Strand: NEGATIVE Subject Start: 4 Subject End: 80 ........ctcttttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttcgtgctcttcacacgccttcgcga..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ........ctcttttccgttacttttggcttgacccaaaagtaacccaaaggtcaaggcttcgtgcgcttcacacgccttcgcga..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-9 bit: 65.9 Len: 41 Query Start:204 Query End:244 Subject Strand: NEGATIVE Subject Start: 79 Subject End: 119 ...........................................................................................................................................................................................................attaaccattaatttgtcattcagagcgaagcgaagaatct...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...........................................................................................................................................................................................................attaaccattaatttatcattcagagcgaagcgatgaatct...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1483_TF1484|glycosyltransferase family protein:penicillin binding protein|POSITIVE:POSITIVE|[1578886,1579698]|813 HSP 1 e-value: 1.0E-23 bit: 113.0 Len: 96 Query Start:196 Query End:291 Subject Strand: NEGATIVE Subject Start: 223 Subject End: 319 ...................................................................................................................................................................................................aattgtcaattaaccattaatttgtcattcagagcgaagcgaagaatcttttcccttt-tcgaggcgagattcctcacggtgttcggaatgacaaag....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................aattgacaattaaccattaatttgtcattcagagcgaagcgaagaatctcttccctttaccggggcgggattcctcactacgttcggaatgacaaag....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-9 bit: 65.9 Len: 53 Query Start:358 Query End:410 Subject Strand: NEGATIVE Subject Start: 148 Subject End: 199 .....................................................................................................................................................................................................................................................................................................................................................................tcaggctttcagccctccgccgaggggggtgcctgttttcccaacgcttcgct................................................................................................................................................................................................................................................................................................................................................................................................................................................................ .....................................................................................................................................................................................................................................................................................................................................................................tcaggctttcagccctccgctga-ggggttgcctgttttcccaatgcttcgct................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 3 e-value: 1.0E-7 bit: 60.0 Len: 46 Query Start:300 Query End:345 Subject Strand: NEGATIVE Subject Start: 8 Subject End: 53 ...........................................................................................................................................................................................................................................................................................................tcggattccgtgtacccggcataaccattaaccattgacaattaac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ...........................................................................................................................................................................................................................................................................................................tcggataccatgtacccggcataacaattaacaattgacaattaac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 4 e-value: 1.0E-7 bit: 60.0 Len: 46 Query Start:300 Query End:345 Subject Strand: NEGATIVE Subject Start: 306 Subject End: 351 ...........................................................................................................................................................................................................................................................................................................tcggattccgtgtacccggcataaccattaaccattgacaattaac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ...........................................................................................................................................................................................................................................................................................................tcggataccatgtacccggcataacaattaacaattgacaattaac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: tfor_TF1846_TF1847|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1997076,1997528]|453 HSP 1 e-value: 6.0E-22 bit: 107.0 Len: 62 Query Start:1 Query End:62 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 62 tcagagcactcttttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ tcagagcactcttttctgttacttttggcttgacccaaaagtaaccaaaaggtcaaggcttc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 1.0E-7 bit: 60.0 Len: 34 Query Start:197 Query End:230 Subject Strand: NEGATIVE Subject Start: 56 Subject End: 89 ....................................................................................................................................................................................................attgtcaattaaccattaatttgtcattcagagc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................attgacaattaaccattaatttgtcattcagagc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2640_TF2641|hypothetical protein:riboflavin kinase/FAD synthase|POSITIVE:POSITIVE|[2809594,2809820]|227 HSP 1 e-value: 1.0E-20 bit: 103.0 Len: 60 Query Start:522 Query End:581 Subject Strand: POSITIVE Subject Start: 15 Subject End: 74 .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gggacgaacgccgagggcgttcgaggcgagattccttacttcgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................... .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gggacgaacgccgagggcgttcgaggcgagattcctcactacgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-12 bit: 75.8 Len: 109 Query Start:358 Query End:466 Subject Strand: POSITIVE Subject Start: 95 Subject End: 199 .....................................................................................................................................................................................................................................................................................................................................................................tcaggctttcagccctccgccgagggggg-tgcctgttttcccaacgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagcaaaca........................................................................................................................................................................................................................................................................................................................................................................................................ .....................................................................................................................................................................................................................................................................................................................................................................tcaggctttcagccctccgctgagatgcgatgcttttttccccaacgcttcgc-----attggactgaattaatgcgccctttcagggcttttacagcggtcagtaaaca........................................................................................................................................................................................................................................................................................................................................................................................................ HSP 3 e-value: 5.0E-7 bit: 58.0 Len: 41 Query Start:253 Query End:293 Subject Strand: POSITIVE Subject Start: 34 Subject End: 74 ............................................................................................................................................................................................................................................................ttcgaggcgagattcctcacggtgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................................................................................................................................................................................ttcgaggcgagattcctcactacgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1182_TF1184|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1268999,1269143]|145 HSP 1 e-value: 1.0E-20 bit: 103.0 Len: 135 Query Start:328 Query End:462 Subject Strand: NEGATIVE Subject Start: 5 Subject End: 135 .......................................................................................................................................................................................................................................................................................................................................taaccattgacaattaacaactgaattacgtcaggctttcagccctccgccgag-gggggtgcctgttttcccaacgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagca............................................................................................................................................................................................................................................................................................................................................................................................................ .......................................................................................................................................................................................................................................................................................................................................taacaattgacaattaacaattgaattacgtcaggcttacagcccttcgccgagatgcgatgcctttttcccaaacgcttcg-----cattgggctgaattatctcgccctttcagggctgttacagcggtcagca............................................................................................................................................................................................................................................................................................................................................................................................................ Subject: tfor_TF3105_TF3106|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[3338403,3338494]|92 HSP 1 e-value: 2.0E-19 bit: 99.6 Len: 54 Query Start:9 Query End:62 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 54 ........ctcttttctgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ........ctcttttttgtcacttttggcttgacccaaaagtaaccaaaaagtcaaggcttc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 6.0E-10 bit: 67.9 Len: 34 Query Start:211 Query End:244 Subject Strand: NEGATIVE Subject Start: 53 Subject End: 86 ..................................................................................................................................................................................................................attaatttgtcattcagagcgaagcgaagaatct...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................attaatttgtcattcagagcgaagcgaagaatct...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2816_TF2817|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[3007245,3007497]|253 HSP 1 e-value: 2.0E-19 bit: 99.6 Len: 97 Query Start:197 Query End:293 Subject Strand: NEGATIVE Subject Start: 104 Subject End: 201 ....................................................................................................................................................................................................attgtcaattaaccattaatttgtcattcagagcgaagcgaagaatct-tttcccttttcgaggcgagattcctcacggtgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................attgacaattaacaattaatttgtcattcagagcaaagcgaagaatctcctttccttttcctcgcgggattcctcactgtgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 9.0E-9 bit: 63.9 Len: 56 Query Start:313 Query End:368 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 56 ........................................................................................................................................................................................................................................................................................................................acccggcataaccattaaccattgacaattaacaactgaattacgtcaggctttca.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................................................................................................accctgcataacaattaacaattgaccattaacaattgaattatgtcaggctttca.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1588_TF1589|hypothetical protein:surface antigen BspA|POSITIVE:POSITIVE|[1702621,1703328]|708 HSP 1 e-value: 6.0E-19 bit: 97.6 Len: 77 Query Start:217 Query End:293 Subject Strand: POSITIVE Subject Start: 199 Subject End: 274 ........................................................................................................................................................................................................................ttgtcattcagagcgaagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................ttgtcattcagagcgaagcgatgaatctttt-ccttttcggggcgggattcctcactgcgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-15 bit: 85.7 Len: 89 Query Start:216 Query End:304 Subject Strand: POSITIVE Subject Start: 482 Subject End: 572 .......................................................................................................................................................................................................................tttgtcattcagagcg-aagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaag-ggtgacgttcgga.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................tttgtcattcagagcgtaagcgaagaatctttttccttttcctcacgagattcctcactgcgttcggaatgacaaagaggagacgttcgga.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 4.0E-11 bit: 71.9 Len: 56 Query Start:407 Query End:462 Subject Strand: POSITIVE Subject Start: 340 Subject End: 395 ......................................................................................................................................................................................................................................................................................................................................................................................................................cgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagca............................................................................................................................................................................................................................................................................................................................................................................................................ ......................................................................................................................................................................................................................................................................................................................................................................................................................cgctgcgcattgggctgaattaacacgccctttcagggctcttacagcagtcagca............................................................................................................................................................................................................................................................................................................................................................................................................ Subject: tfor_TF0541_TF0542|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[571919,572057]|139 HSP 1 e-value: 2.0E-18 bit: 95.6 Len: 92 Query Start:202 Query End:293 Subject Strand: NEGATIVE Subject Start: 46 Subject End: 137 .........................................................................................................................................................................................................caattaaccattaatttgtcattcagagcgaagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .........................................................................................................................................................................................................caattaaccattaatttgtcattcagggcgaagcgaagaatctccttctttttcctcgcgagattcctcactacgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 5.0E-7 bit: 58.0 Len: 37 Query Start:547 Query End:583 Subject Strand: NEGATIVE Subject Start: 44 Subject End: 80 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gcgagattccttacttcgttcggaatgacaaaggggg................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gcgagattcctcactacgttcggaatgacaaaggggg................................................................................................................................................................................................................................................................................... Subject: tfor_TF2817_TF2818|hypothetical protein:acetylornithine aminotransferase|POSITIVE:POSITIVE|[3007687,3007878]|192 HSP 1 e-value: 6.0E-16 bit: 87.7 Len: 48 Query Start:197 Query End:244 Subject Strand: NEGATIVE Subject Start: 11 Subject End: 58 ....................................................................................................................................................................................................attgtcaattaaccattaatttgtcattcagagcgaagcgaagaatct...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................attgacaattaaccattaatttgtcattcagagcgaagcgaagaatct...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-14 bit: 81.8 Len: 49 Query Start:297 Query End:345 Subject Strand: NEGATIVE Subject Start: 46 Subject End: 94 ........................................................................................................................................................................................................................................................................................................cgttcggattccgtgtacccggcataaccattaaccattgacaattaac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................................................................................................................................................................cgttcggataccgtgtacccggcataacaattaaccattgacaattaac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: tfor_TF1841_TF1842|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1992328,1992710]|383 HSP 1 e-value: 2.0E-15 bit: 85.7 Len: 89 Query Start:358 Query End:446 Subject Strand: NEGATIVE Subject Start: 163 Subject End: 257 .....................................................................................................................................................................................................................................................................................................................................................................tcaggctttcagccctccgccgaggggggtgcc-tgttttcccaacgcttcgct-----gcacattgggctgaattaacgtgccctttcagggct............................................................................................................................................................................................................................................................................................................................................................................................................................ .....................................................................................................................................................................................................................................................................................................................................................................tcaggctttcagccctccgccgagggggtcgcccttttttcccaacgcttcgctttgctgcacattgggctgaattaatacgccctttcagggct............................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-14 bit: 81.8 Len: 92 Query Start:197 Query End:288 Subject Strand: NEGATIVE Subject Start: 11 Subject End: 103 ....................................................................................................................................................................................................attgtcaattaaccattaatttgtcattcagagcg-aagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgaca.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................attgacaattaacaattactttgtcattcagagcgtaagcgaagaatctctttcctcttcctcgcgagattcctcactgcgttcggaatgaca.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 6.0E-13 bit: 77.8 Len: 78 Query Start:216 Query End:293 Subject Strand: NEGATIVE Subject Start: 279 Subject End: 357 .......................................................................................................................................................................................................................tttgtcattcagagcg-aagcgaagaatcttttcccttttcgaggcgagattcctcacggtgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................tttgtcattcagagcgtaagcgaagaatctctttcctcttcctcgcgagattcctcactgcgttcggaatgacaaaggg..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 6.0E-10 bit: 67.9 Len: 38 Query Start:310 Query End:347 Subject Strand: NEGATIVE Subject Start: 89 Subject End: 126 .....................................................................................................................................................................................................................................................................................................................tgtacccggcataaccattaaccattgacaattaacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................tgtatccggcataaccattaaccattgacaattaacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 5 e-value: 5.0E-7 bit: 58.0 Len: 37 Query Start:547 Query End:583 Subject Strand: NEGATIVE Subject Start: 277 Subject End: 313 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gcgagattccttacttcgttcggaatgacaaaggggg................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gcgagattcctcactgcgttcggaatgacaaaggggg................................................................................................................................................................................................................................................................................... Subject: tfor_TF2815_TF2816|meso-diaminopimelate D-dehydrogenase:hypothetical protein|POSITIVE:POSITIVE|[3006481,3007064]|584 HSP 1 e-value: 1.0E-13 bit: 79.8 Len: 60 Query Start:402 Query End:461 Subject Strand: POSITIVE Subject Start: 246 Subject End: 305 .................................................................................................................................................................................................................................................................................................................................................................................................................cgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagc............................................................................................................................................................................................................................................................................................................................................................................................................. .................................................................................................................................................................................................................................................................................................................................................................................................................cgcttcgctccacattgggctgaattaatgcgccctttcagggcttttaaagcagtcagc............................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-12 bit: 75.8 Len: 62 Query Start:313 Query End:374 Subject Strand: NEGATIVE Subject Start: 464 Subject End: 525 ........................................................................................................................................................................................................................................................................................................................acccggcataaccattaaccattgacaattaacaactgaattacgtcaggctttcagccctc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................................................................................................accctgcataacaattaacaattgaccattaacaattgaattatgtcaggctttcagccctc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF0339_TF0340|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[363808,364032]|225 HSP 1 e-value: 6.0E-10 bit: 67.9 Len: 109 Query Start:353 Query End:461 Subject Strand: POSITIVE Subject Start: 63 Subject End: 167 ................................................................................................................................................................................................................................................................................................................................................................ttacgtcaggctttcagccctccgccgagggggg-tgcctgttttcccaacgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagc............................................................................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................................................................................................................................................................ttacgtcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgc-----attgggctgaattaacacgccctttcagggctcttacagcagtcagc............................................................................................................................................................................................................................................................................................................................................................................................................. Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UCAGAGCACUCUUUUCUGUCACUUUUGGCUUGACCCAAAAGUAACCAAAAAGUCAAGGCUUCGUGCUCUUCACACGCCUUCGCGAGGCUUGCAGGUCGGAAAAUCAGGUAACUCGCUUCGCUUCGGACAGCCUGAUUUUCUUUCGCCCUGCUCGCUGCUCCGUCGGCUCACCACCUGAGGCCCAUGGACAAAAUUAAUUGUCAAUUAACCAUUAAUUUGUCAUUCAGAGCGAAGCGAAGAAUCUUUUCCCUUUUCGAGGCGAGAUUCCUCACGGUGUUCGGAAUGACAAAGGGUGACGUUCGGAUUCCGUGUACCCGGCAUAACCAUUAACCAUUGACAAUUAACAACUGAAUUACGUCAGGCUUUCAGCCCUCCGCCGAGGGGGGUGCCUGUUUUCCCAACGCUUCGCUGCACAUUGGGCUGAAUUAACGUGCCCUUUCAGGGCUUUUACAGCGGUCAGCAAACACCUCAACACCUCAACACCUCAACGCCCCGAAGGGGUUAGCUCGACCGAGGCCCAUGGGACGAACGCCGAGGGCGUUCGAGGCGAGAUUCCUUACUUCGUUCGGAAUGACAAAGGGGGAGGCGCACUCCCUCGCAUGGUGUGUGUGAGCCUCCUCGCAUGGUAUGUGCGUGCUUCGAGUUAAGGCUACACCUGUCAUUCAAUACACUUUUCACUUUCUUUCAAAGCGCUUCUUUUGUUAUUCAGAGCGUCAGCGAAUCCAAUCGAAUCAAAAUAUACUUGCUUUUUAAAAACCCCCUCUCCCUUGGUUUCCGCGCUACUACGGGGAAGUCUGUGCGGGAGAGGAGGAAAAUGAAAAAGAGACAAUGUUGUUUCAAUAUGAGUUAUUCCGUUUA ..((((((..(((((..((.((((((((......)))))))).))..)))))....((.((((((((((.((((..((...((((((...(((((.(((((((((((((...(((........)))...)))))))))))...)).))))).............((((((((((............(((((......))))).....(((((...((((((((((.((((((((..(.(((((((.((((....(((((((.(((((.....((((..((((((..(.((.(....).)).).))))))..)))).((.....))........................)))))....(((((.....(((((((.....)))))))))))).........)))))))........((((((..........((((.....))))........((((((((...................(........).(((....)))...))).))))).)))))).))))((((((((...))))))))....))))))).)..)))))))).))))))))))(((((((.....)))))))..)))))))).))))))).))))))..))..)))).((((((.(((..((((.......(((........))).......))))..))).))))))..............)))))....))))).))...................)))))).......((.((((((((..(..((((.((......)).))))..).....)))))))).))...........((((((....)))))).................... (-290.34) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAAACGGAAUAACUCAUAUUGAAACAACAUUGUCUCUUUUUCAUUUUCCUCCUCUCCCGCACAGACUUCCCCGUAGUAGCGCGGAAACCAAGGGAGAGGGGGUUUUUAAAAAGCAAGUAUAUUUUGAUUCGAUUGGAUUCGCUGACGCUCUGAAUAACAAAAGAAGCGCUUUGAAAGAAAGUGAAAAGUGUAUUGAAUGACAGGUGUAGCCUUAACUCGAAGCACGCACAUACCAUGCGAGGAGGCUCACACACACCAUGCGAGGGAGUGCGCCUCCCCCUUUGUCAUUCCGAACGAAGUAAGGAAUCUCGCCUCGAACGCCCUCGGCGUUCGUCCCAUGGGCCUCGGUCGAGCUAACCCCUUCGGGGCGUUGAGGUGUUGAGGUGUUGAGGUGUUUGCUGACCGCUGUAAAAGCCCUGAAAGGGCACGUUAAUUCAGCCCAAUGUGCAGCGAAGCGUUGGGAAAACAGGCACCCCCCUCGGCGGAGGGCUGAAAGCCUGACGUAAUUCAGUUGUUAAUUGUCAAUGGUUAAUGGUUAUGCCGGGUACACGGAAUCCGAACGUCACCCUUUGUCAUUCCGAACACCGUGAGGAAUCUCGCCUCGAAAAGGGAAAAGAUUCUUCGCUUCGCUCUGAAUGACAAAUUAAUGGUUAAUUGACAAUUAAUUUUGUCCAUGGGCCUCAGGUGGUGAGCCGACGGAGCAGCGAGCAGGGCGAAAGAAAAUCAGGCUGUCCGAAGCGAAGCGAGUUACCUGAUUUUCCGACCUGCAAGCCUCGCGAAGGCGUGUGAAGAGCACGAAGCCUUGACUUUUUGGUUACUUUUGGGUCAAGCCAAAAGUGACAGAAAAGAGUGCUCUGA ............(((..((((((.(((.((...((((((((......(((((((((((........((((.(((....))).)))).....))))))))))).....))))))..))...)).))).))))))(((.((((..(.((((((..........)).)))))..)))).....(((....((((.((((.(...(((.....)))..).)))).)))).)))...)))...)))..(((((((...((((......(((((.....)))))..((((((((((.((.(((((..((((((((.....((((((((...))))))))((((....(((((((.((...(((((((....))).))))...))))))))).((((((((...(((...(((((((...((((.....))))..(((.....)))......))))))).)))(((.((((...(((......))).(((((((((.(((..(((((.(((((((.....(((((((......)))))))))))))).)))))...(((...)))....)))))))))))).)))).))).((....)).....))))))))...))))..))))))))..))))).)).)))))))))).....(((..((.(((((......))))).))..)))...)))))))))))..((((((((((((((((.((...((((((((((..(..((........))..)..)))))))))))).))))).....)))).(((((.((((.....))))..)))))..((((((.(((((((((((......))))))))))).))))))..))))))). (-309.32) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1109 170 121 205 156 tfor:TF1845|5end_hypothetical_protein_1996620..1996850_POSITIVE 1109 170 121 205 156 tfor:TF1185|5end_hypothetical_protein_1269238..1269468_POSITIVE 1105 189 141 69 21 tfor:TF2817|5end_hypothetical_protein_3007358..3007588_POSITIVE 1090 560 511 58 10 tfor:TF1187|5end_hypothetical_protein_1269625..1269855_POSITIVE 1090 560 511 168 120 tfor:TF1182|5end_hypothetical_protein_1268565..1268795_POSITIVE 1058 560 511 58 9 tfor:TF3105|5end_hypothetical_protein_3338068..3338298_POSITIVE 996 120 71 80 31 tfor:TF0534|5end_hypothetical_protein_559509..559739_POSITIVE 988 180 131 67 18 tfor:TF1841|5end_hypothetical_protein_1991936..1992166_POSITIVE 975 189 141 226 178 tfor:TF0543|5end_glycine_cleavage_system_p-protein_572251..572481_POSITIVE 974 570 522 53 5 tfor:TF1846|5end_hypothetical_protein_1996726..1996956_POSITIVE 954 410 361 183 135 tfor:TF2478|5end_hypothetical_protein_2655375..2655605_POSITIVE 928 580 533 48 1 tfor:TF1844|5end_hypothetical_protein_1996389..1996619_POSITIVE 885 120 71 138 89 tfor:TF2517|5end_hypothetical_protein_2695089..2695319_POSITIVE 878 80 31 201 152 tfor:TF3106|5end_hypothetical_protein_3338355..3338585_POSITIVE 878 320 271 90 41 tfor:TF0542|5end_hypothetical_protein_571918..572148_POSITIVE 815 189 147 43 1 tfor:TF0538|5end_hypothetical_protein_566891..567121_POSITIVE 800 118 73 231 186 tfor:TF2746|5end_hypothetical_protein_2927996..2928226_POSITIVE 790 299 251 190 139 tfor:TF2745|5end_hypothetical_protein_2927562..2927792_POSITIVE 788 270 221 89 40 tfor:TF2816|5end_hypothetical_protein_3006925..3007155_POSITIVE 783 347 301 104 58 tfor:TF1183|5end_hypothetical_protein_1268391..1268621_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1088 160 111 144 95 tfor:TF2745|3end_hypothetical_protein_2927947..2928097_POSITIVE 1080 170 121 115 66 tfor:TF1186|3end_hypothetical_protein_1269815..1269965_POSITIVE 1076 130 81 132 83 tfor:TF1187|3end_hypothetical_protein_1269872..1270022_POSITIVE 1002 140 91 142 93 tfor:TF1659|3end_hypothetical_protein_1775209..1775359_POSITIVE 998 130 81 148 99 tfor:TF1845|3end_hypothetical_protein_1997005..1997155_POSITIVE 998 130 81 148 99 tfor:TF0538|3end_hypothetical_protein_567135..567285_POSITIVE 991 120 71 148 99 tfor:TF1846|3end_hypothetical_protein_1997015..1997165_POSITIVE 958 100 52 128 80 tfor:TF1844|3end_hypothetical_protein_1996693..1996843_POSITIVE 926 140 91 142 93 tfor:TF0598|3end_hypothetical_protein_629500..629650_POSITIVE 878 80 31 108 59 tfor:TF3105|3end_hypothetical_protein_3338342..3338492_POSITIVE 822 120 73 148 101 tfor:TF1184|3end_hypothetical_protein_1269311..1269461_POSITIVE 822 120 73 148 101 tfor:TF1183|3end_hypothetical_protein_1268728..1268878_POSITIVE 807 250 202 124 76 tfor:TF1483|3end_glycosyltransferase_family_protein_1578825..1578975_POSITIVE 796 170 121 145 95 tfor:TF2795|3end_hypothetical_protein_2980909..2981059_POSITIVE 782 410 361 135 85 tfor:TF3106|3end_hypothetical_protein_3338608..3338758_POSITIVE 777 70 21 139 90 tfor:TF2817|3end_hypothetical_protein_3007626..3007776_POSITIVE 775 409 361 114 65 tfor:TF2547|3end_hypothetical_protein_2730947..2731097_POSITIVE 763 409 361 76 27 tfor:TF1185|3end_hypothetical_protein_1269563..1269713_POSITIVE 741 588 541 51 5 tfor:TF0541|3end_conserved_hypothetical_protein_571858..572008_POSITIVE 737 460 414 84 38 tfor:TF1182|3end_hypothetical_protein_1268938..1269088_POSITIVE