Origin IGS: taaggcctctgcgaacatcaaaagcagggcgcttgtcttgtccataattttcataattttcactggtttcaaatagcatgctgacaaccgattatccaaccgcaaacaacctttgccgcaaaacgaaaaaaaaatgcctcaggcttacagccctgcaagtgttgaggtgttgatctgttgaggtgttgatctgtttgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacaggcgccccctcggcggagggatgaaagcctgacgtaattcagttgttaattgtcaattgttatgcgtggttatccgaacgcaaatttcgcaaatggcgcaaatcaacgctgtacgcaccgtagagacgcaatgacttttgcgagtaagcgagagcagagccgaatttattcgagctatgccgagcgtgagcaaattgttagaataaaattgcatctctacaccatgtacccggcatgaccattgacaattaaccattgacaattaatttcgtcgatgggcctcgggcggtgagctgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtgacagaaggagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagagggacatccccccccttcaaaggggggaagagcgaagcgaagggggatgttatcccttcaaaggggggggaagagcggtaaaacgaaaaaatctgtgtgaagatttattccccgcaaattgtttctgataaatcacagttgtgaattatctcctgcaaattgtttttaatagatcatagttgtgatttgtctcccgcaaagggggttgtcatcaatccacgtgagggattggtgtcttttcgttgtca .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 tgacaacgaaaagacaccaatccctcacgtggattgatgacaaccccctttgcgggagacaaatcacaactatgatctattaaaaacaatttgcaggagataattcacaactgtgatttatcagaaacaatttgcggggaataaatcttcacacagattttttcgttttaccgctcttcccccccctttgaagggataacatcccccttcgcttcgctcttcccccctttgaaggggggggatgtccctctgcgttcggataccgtgtacccggcataacaattgacaattgacaattaaccattaatatgtcattcagagcgtaagcgaagaatctccttctgtcacttttggcttgacccaaaagtaaccaaaaggtcaaggcttcgtgcgcttcacacgccttcgcgacgctcgcaggtcggaaaatcaggtaactcgcttcgcttcggacagcctgattttctttcgccctgctcgctgctccgtcagctcaccgcccgaggcccatcgacgaaattaattgtcaatggttaattgtcaatggtcatgccgggtacatggtgtagagatgcaattttattctaacaatttgctcacgctcggcatagctcgaataaattcggctctgctctcgcttactcgcaaaagtcattgcgtctctacggtgcgtacagcgttgatttgcgccatttgcgaaatttgcgttcggataaccacgcataacaattgacaattaacaactgaattacgtcaggctttcatccctccgccgagggggcgcctgttttcccaacgcttcgcttcgctctgcattgggctgaattaatgcgccctttcagggcttttacaacggtcagcaaacagatcaacacctcaacagatcaacacctcaacacttgcagggctgtaagcctgaggcatttttttttcgttttgcggcaaaggttgtttgcggttggataatcggttgtcagcatgctatttgaaaccagtgaaaattatgaaaattatggacaagacaagcgccctgcttttgatgttcgcagaggcctta Mask Tandem Repeat Region ================================================ taaggcctctgcgaacatcaaaagcagggcgcttgtcttgtccataattttcataattttcactggtttcaaatagcatgctgacaaccgattatccaaccgcaaacaacctttgccgcaaaacgaaaaaaaaatgcctcaggcttacagccctgcaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacaggcgccccctcggcggagggatgaaagcctgacgtaattcagttgttaattgtcaattgttatgcgtggttatccgaacgcaaatttcgcaaatggcgcaaatcaacgctgtacgcaccgtagagacgcaatgacttttgcgagtaagcgagagcagagccgaatttattcgagctatgccgagcgtgagcaaattgttagaataaaattgcatctctacaccatgtacccggcatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttcgtcgatgggcctcgggcggtgagctgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtgacagaaggagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagagggacatccccccccttcaaaggggggaagagcgaagcgaagggggatgttatcccttcaaaggggggggaagagcggtaaaacgaaaaaatctgtgtgaagatttattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggggttgtcatcaatccacgtgagggattggtgtcttttcgttgtca Find is-nt database================================================ Query_seq: TF2500:TF2501|TF2500:TF2501:ABC transporter, ATP-binding protein:DNA mismatch repair protein:->->:2675363..2676419 1057 taaggcctctgcgaacatcaaaagcagggcgcttgtcttgtccataattttcataattttcactggtttcaaatagcatgctgacaaccgattatccaaccgcaaacaacctttgccgcaaaacgaaaaaaaaatgcctcaggcttacagccctgcaagtgttgaggtgttgatctgttgaggtgttgatctgtttgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacaggcgccccctcggcggagggatgaaagcctgacgtaattcagttgttaattgtcaattgttatgcgtggttatccgaacgcaaatttcgcaaatggcgcaaatcaacgctgtacgcaccgtagagacgcaatgacttttgcgagtaagcgagagcagagccgaatttattcgagctatgccgagcgtgagcaaattgttagaataaaattgcatctctacaccatgtacccggcatgaccattgacaattaaccattgacaattaatttcgtcgatgggcctcgggcggtgagctgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtgacagaaggagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagagggacatccccccccttcaaaggggggaagagcgaagcgaagggggatgttatcccttcaaaggggggggaagagcggtaaaacgaaaaaatctgtgtgaagatttattccccgcaaattgtttctgataaatcacagttgtgaattatctcctgcaaattgtttttaatagatcatagttgtgatttgtctcccgcaaagggggttgtcatcaatccacgtgagggattggtgtcttttcgttgtca Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: TF2500:TF2501|TF2500:TF2501:ABC transporter, ATP-binding protein:DNA mismatch repair protein:->->:2675363..2676419 1057 taaggcctctgcgaacatcaaaagcagggcgcttgtcttgtccataattttcataattttcactggtttcaaatagcatgctgacaaccgattatccaaccgcaaacaacctttgccgcaaaacgaaaaaaaaatgcctcaggcttacagccctgcaagtgttgaggtgttgatctgttgaggtgttgatctgtttgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacaggcgccccctcggcggagggatgaaagcctgacgtaattcagttgttaattgtcaattgttatgcgtggttatccgaacgcaaatttcgcaaatggcgcaaatcaacgctgtacgcaccgtagagacgcaatgacttttgcgagtaagcgagagcagagccgaatttattcgagctatgccgagcgtgagcaaattgttagaataaaattgcatctctacaccatgtacccggcatgaccattgacaattaaccattgacaattaatttcgtcgatgggcctcgggcggtgagctgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtgacagaaggagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagagggacatccccccccttcaaaggggggaagagcgaagcgaagggggatgttatcccttcaaaggggggggaagagcggtaaaacgaaaaaatctgtgtgaagatttattccccgcaaattgtttctgataaatcacagttgtgaattatctcctgcaaattgtttttaatagatcatagttgtgatttgtctcccgcaaagggggttgtcatcaatccacgtgagggattggtgtcttttcgttgtca Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: TF2500:TF2501|TF2500:TF2501:ABC transporter, ATP-binding protein:DNA mismatch repair protein:->->:2675363..2676419 1057 taaggcctctgcgaacatcaaaagcagggcgcttgtcttgtccataattttcataattttcactggtttcaaatagcatgctgacaaccgattatccaaccgcaaacaacctttgccgcaaaacgaaaaaaaaatgcctcaggcttacagccctgcaagtgttgaggtgttgatctgttgaggtgttgatctgtttgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacaggcgccccctcggcggagggatgaaagcctgacgtaattcagttgttaattgtcaattgttatgcgtggttatccgaacgcaaatttcgcaaatggcgcaaatcaacgctgtacgcaccgtagagacgcaatgacttttgcgagtaagcgagagcagagccgaatttattcgagctatgccgagcgtgagcaaattgttagaataaaattgcatctctacaccatgtacccggcatgaccattgacaattaaccattgacaattaatttcgtcgatgggcctcgggcggtgagctgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtgacagaaggagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagagggacatccccccccttcaaaggggggaagagcgaagcgaagggggatgttatcccttcaaaggggggggaagagcggtaaaacgaaaaaatctgtgtgaagatttattccccgcaaattgtttctgataaatcacagttgtgaattatctcctgcaaattgtttttaatagatcatagttgtgatttgtctcccgcaaagggggttgtcatcaatccacgtgagggattggtgtcttttcgttgtca Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 taaggcctctgcgaacatcaaaagcagggcgcttgtcttgtccataattttcataattttcactggtttcaaatagcatgctgacaaccgattatccaaccgcaaacaacctttgccgcaaaacgaaaaaaaaatgcctcaggcttacagccctgcaagtgttgaggtgttgatctgttgaggtgttgatctgtttgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacaggcgccccctcggcggagggatgaaagcctgacgtaattcagttgttaattgtcaattgttatgcgtggttatccgaacgcaaatttcgcaaatggcgcaaatcaacgctgtacgcaccgtagagacgcaatgacttttgcgagtaagcgagagcagagccgaatttattcgagctatgccgagcgtgagcaaattgttagaataaaattgcatctctacaccatgtacccggcatgaccattgacaattaaccattgacaattaatttcgtcgatgggcctcgggcggtgagctgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtgacagaaggagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagagggacatccccccccttcaaaggggggaagagcgaagcgaagggggatgttatcccttcaaaggggggggaagagcggtaaaacgaaaaaatctgtgtgaagatttattccccgcaaattgtttctgataaatcacagttgtgaattatctcctgcaaattgtttttaatagatcatagttgtgatttgtctcccgcaaagggggttgtcatcaatccacgtgagggattggtgtcttttcgttgtca Predict ORF larger than 30AA ================================================ Protein_Len: 36 Strand: + Start: 63 End: 170 .............................................................. M V S N S M L T T D Y P T A N N L C R K T K K K C L R L T A L Q V L R C ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 37 Strand: + Start: 183 End: 293 ...................................................................................................................................................................................... M L I C L L T V V K A L K G R I N S A Q C R A K R S V G K T G A P S A E G ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 60 Strand: + Start: 322 End: 507 ................................................................................................................................................................................................................................................................................................................................. M S I V M R G Y P N A N F A N G A N Q R C T H R R D A M T F A S K R E Q S R I Y S S Y A E R E Q I V R I K L H L Y T M Y ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 42 Strand: + Start: 762 End: 887 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M S I V N C Y A G Y T V S E R R G T S P P F K G G K S E A K G D V I P S K G G E E R .......................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 625 End: 906 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M I F R P A S V A K A C E A H E A L T F W L L L G Q A K S D R R R F F A Y A L N D I L M V N C Q L S I V M P G T R Y P N ....................................................................................................................................................... Protein_Len: 58 Strand: + Start: 761 End: 934 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M V N C Q L L C R V H G I R T Q R D I P P L Q R G E E R S E G G C Y P F K G G G R A V K R K N L C E D L F P A N C F ........................................................................................................................... Protein_Len: 34 Strand: + Start: 954 End: 1055 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M I S C K L F L I D H S C D L S P A K G V V I N P R E G L V S F R C .. Protein_Len: 44 Strand: - Start: 782 End: 913 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. A P Y V T D S R L P V D G G K L P P F L S A F P S T I G E F P P S S R Y F S F I Q T F M ................................................................................................................................................ Protein_Len: 30 Strand: - Start: 768 End: 857 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... N D I T I G P V R Y G F A S P C G G G E F P P L A F R L P M ........................................................................................................................................................................................................ Protein_Len: 44 Strand: - Start: 538 End: 669 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... N R R H A E P P S S V S C R A P R F F I L S D S A F R T V Q N E S R R A D R L R T F R M .................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 524 End: 751 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L L S C P S L F D P Q G F R L S N G S K G V Q S R R S P T H L A R L R S R K T V K P D L W F H C F S I R R K R E S H C M .................................................................................................................................................................................................................................................................................................................. Protein_Len: 31 Strand: - Start: 492 End: 584 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... V M Y G A H G N V I L W Q C N I E D I P R P R H A S P A A L M ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 328 End: 534 ....................................................................................................................................................................................................................................................................................................................................... I E C I A C I L A T R V T S V C H S K R T L S L L A S N I R A I G L T L L N N S Y F Q M E V G H V R C S W Q C N V M S M ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 95 End: 310 .............................................................................................. F H R L S V A R C T N L H Q D T S T N I Q K S V T T F A R F P R M L E A W H L A F R L T P F V P A G E A S P H F G S T M ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 54 Strand: - Start: 72 End: 233 ....................................................................... I A H Q C G I I W G C V V K A A F R F F F A E P K C G Q L H Q P T S R N L H Q D T Q Q G N Y F G Q F P A N M ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 45 Strand: - Start: 1 End: 135 L A E A F M L L L A S T K D M I K M I K V P K L Y C A S L R N D L R L C G K G C F S F F M .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... taaggcctctgcgaacatcaaaagcagggcgcttgtcttgtccataattttcataattttcactggtttcaaatagcatgctgacaaccgattatccaaccgcaaacaacctttgccgcaaaacgaaaaaaaaatgcctcaggcttacagccctgcaagtgttgaggtgttgatctgttgaggtgttgatctgtttgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacaggcgccccctcggcggagggatgaaagcctgacgtaattcagttgttaattgtcaattgttatgcgtggttatccgaacgcaaatttcgcaaatggcgcaaatcaacgctgtacgcaccgtagagacgcaatgacttttgcgagtaagcgagagcagagccgaatttattcgagctatgccgagcgtgagcaaattgttagaataaaattgcatctctacaccatgtacccggcatgaccattgacaattaaccattgacaattaatttcgtcgatgggcctcgggcggtgagctgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtgacagaaggagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagagggacatccccccccttcaaaggggggaagagcgaagcgaagggggatgttatcccttcaaaggggggggaagagcggtaaaacgaaaaaatctgtgtgaagatttattccccgcaaattgtttctgataaatcacagttgtgaattatctcctgcaaattgtttttaatagatcatagttgtgatttgtctcccgcaaagggggttgtcatcaatccacgtgagggattggtgtcttttcgttgtca Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ taaggcctctgcgaacatcaaaagcagggcgcttgtcttgtccataattttcataattttcactggtttcaaatagcatgctgacaaccgattatccaaccgcaaacaacctttgccgcaaaacgaaaaaaaaatgcctcaggcttacagccctgcaagtgttgaggtgttgatctgttgaggtgttgatctgtttgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacaggcgccccctcggcggagggatgaaagcctgacgtaattcagttgttaattgtcaattgttatgcgtggttatccgaacgcaaatttcgcaaatggcgcaaatcaacgctgtacgcaccgtagagacgcaatgacttttgcgagtaagcgagagcagagccgaatttattcgagctatgccgagcgtgagcaaattgttagaataaaattgcatctctacaccatgtacccggcatgaccattgacaattaaccattgacaattaatttcgtcgatgggcctcgggcggtgagctgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtgacagaaggagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagagggacatccccccccttcaaaggggggaagagcgaagcgaagggggatgttatcccttcaaaggggggggaagagcggtaaaacgaaaaaatctgtgtgaagatttattccccgcaaattgtttctgataaatcacagttgtgaattatctcctgcaaattgtttttaatagatcatagttgtgatttgtctcccgcaaagggggttgtcatcaatccacgtgagggattggtgtcttttcgttgtca Predict TransTerm conf > 70================================================ TransTerm Strand: - Conf: 43 HP_score: -3.1 Tail_Score: -3.10641 Start: 100 End: 118 Full_Region: ttttttttcgttttg cggcaaa ggttg tttgcgg ttggataatcggttg ...................................................................................................cggcaaaggttgtttgcgg........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 100 HP_score: -2.4 Tail_Score: -6.31682 Start: 135 End: 145 Full_Region: acttgcagggctgta agcc tga ggca tttttttttcgtttt ......................................................................................................................................agcctgaggca................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: - Conf: 79 HP_score: -9.1 Tail_Score: -4.08767 Start: 213 End: 225 Full_Region: gggctgaattaatgc gccct ttc agggc ttttacaacggtcag ....................................................................................................................................................................................................................gccctttcagggc................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: - Conf: 49 HP_score: -4.7 Tail_Score: -2.89881 Start: 399 End: 414 Full_Region: ctgctctcgcttact cgcaa aagtca ttgcg tctctacggtgcgta ..............................................................................................................................................................................................................................................................................................................................................................................................................cgcaaaagtcattgcg................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 49 HP_score: -2.6 Tail_Score: -3.57418 Start: 514 End: 534 Full_Region: TACCCGGCATGACCA TTGACAAT TAACC ATTGACAA TTAATTTCGTCGATG .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACAATTAACCATTGACAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 51 HP_score: -4.0 Tail_Score: -3.46212 Start: 525 End: 550 Full_Region: ctcaccgcccgaggc ccatcgacga aattaa ttgtcaatgg ttaattgtcaatggt ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ccatcgacgaaattaattgtcaatgg........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 45 HP_score: -3.4 Tail_Score: -3.08201 Start: 894 End: 919 Full_Region: gaaacaatttgcggg gaataaatct tcacac agattttttc gttttaccgctcttc .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gaataaatcttcacacagattttttc.......................................................................................................................................... TransTerm Strand: + Conf: 51 HP_score: -3.3 Tail_Score: -3.50325 Start: 1021 End: 1041 Full_Region: CAAAGGGGGTTGTCA TCAATCC ACGTGAG GGATTGG TGTCTTTTCGTTGTC ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATCCACGTGAGGGATTGG................ TransTerm Strand: + Conf: 45 HP_score: -4.6 Tail_Score: -2.6911 Start: 1022 End: 1040 Full_Region: AAAGGGGGTTGTCAT CAATCC ACGTGAG GGATTG GTGTCTTTTCGTTGT .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCCACGTGAGGGATTG................. Find igs database================================================ Query_seq: TF2500:TF2501|TF2500:TF2501:ABC transporter, ATP-binding protein:DNA mismatch repair protein:->->:2675363..2676419 1057 taaggcctctgcgaacatcaaaagcagggcgcttgtcttgtccataattttcataattttcactggtttcaaatagcatgctgacaaccgattatccaaccgcaaacaacctttgccgcaaaacgaaaaaaaaatgcctcaggcttacagccctgcaagtgttgaggtgttgatctgttgaggtgttgatctgtttgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacaggcgccccctcggcggagggatgaaagcctgacgtaattcagttgttaattgtcaattgttatgcgtggttatccgaacgcaaatttcgcaaatggcgcaaatcaacgctgtacgcaccgtagagacgcaatgacttttgcgagtaagcgagagcagagccgaatttattcgagctatgccgagcgtgagcaaattgttagaataaaattgcatctctacaccatgtacccggcatgaccattgacaattaaccattgacaattaatttcgtcgatgggcctcgggcggtgagctgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtgacagaaggagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagagggacatccccccccttcaaaggggggaagagcgaagcgaagggggatgttatcccttcaaaggggggggaagagcggtaaaacgaaaaaatctgtgtgaagatttattccccgcaaattgtttctgataaatcacagttgtgaattatctcctgcaaattgtttttaatagatcatagttgtgatttgtctcccgcaaagggggttgtcatcaatccacgtgagggattggtgtcttttcgttgtca Intra-Species Hit: Count: 33 Min: 1 Max: 1057 Len: 1057 Subject: tfor_TF2500_TF2501|ABC transporter, ATP-binding protein:DNA mismatch repair protein|POSITIVE:POSITIVE|[2675363,2676419]|1057 HSP 1 e-value: 0.0 bit: 1947.0 Len: 1057 Query Start:1 Query End:1057 Subject Strand: POSITIVE Subject Start: 1 Subject End: 1057 taaggcctctgcgaacatcaaaagcagggcgcttgtcttgtccataattttcataattttcactggtttcaaatagcatgctgacaaccgattatccaaccgcaaacaacctttgccgcaaaacgnnnnnnnnntgcctcaggcttacagccctgcaagtgttgaggtgttgatctgttgaggtgttgatctgtttgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacaggcgccccctcggcggagggatgaaagcctgacgtaattcagttgttaattgtcaattgttatgcgtggttatccgaacgcaaatttcgcaaatggcgcaaatcaacgctgtacgcaccgtagagacgcaatgacttttgcgagtaagcgagagcagagccgaatttattcgagctatgccgagcgtgagcaaattgttagaataaaattgcatctctacaccatgtacccggcatgaccattgacaattaaccattgacaattaatttcgtcgatgggcctcgggcggtgagctgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtgacagaaggagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagagggacatnnnnnnnnttcaaaggggggaagagcgaagcgaagggggatgttatcccttcaaannnnnnnnaagagcggtaaaacgaaaaaatctgtgtgaagatttattccccgcaaattgtttctgataaatcacagttgtgaattatctcctgcaaattgtttttaatagatcatagttgtgatttgtctcccgcaaagggggttgtcatcaatccacgtgagggattggtgtcttttcgttgtca taaggcctctgcgaacatcaaaagcagggcgcttgtcttgtccataattttcataattttcactggtttcaaatagcatgctgacaaccgattatccaaccgcaaacaacctttgccgcaaaacgaaaaaaaaatgcctcaggcttacagccctgcaagtgttgaggtgttgatctgttgaggtgttgatctgtttgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacaggcgccccctcggcggagggatgaaagcctgacgtaattcagttgttaattgtcaattgttatgcgtggttatccgaacgcaaatttcgcaaatggcgcaaatcaacgctgtacgcaccgtagagacgcaatgacttttgcgagtaagcgagagcagagccgaatttattcgagctatgccgagcgtgagcaaattgttagaataaaattgcatctctacaccatgtacccggcatgaccattgacaattaaccattgacaattaatttcgtcgatgggcctcgggcggtgagctgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtgacagaaggagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagagggacatccccccccttcaaaggggggaagagcgaagcgaagggggatgttatcccttcaaaggggggggaagagcggtaaaacgaaaaaatctgtgtgaagatttattccccgcaaattgtttctgataaatcacagttgtgaattatctcctgcaaattgtttttaatagatcatagttgtgatttgtctcccgcaaagggggttgtcatcaatccacgtgagggattggtgtcttttcgttgtca Subject: tfor_TF0685_TF0686|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[731193,732338]|1146 HSP 1 e-value: 1.0E-100 bit: 367.0 Len: 232 Query Start:548 Query End:779 Subject Strand: NEGATIVE Subject Start: 148 Subject End: 379 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgggcctcgggcggtgagctgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtgac-agaaggagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgt...................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgggcctcgggcggtgagccgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcaagcgtcgcgaaggcgtgtgaagcgcacgaagccttgacctttgggttactttttggtcaagccaaaagtgacaaaaaagagattcttcgctt-cgctctgaatgacaaattaatggttaattgtcaattgttaattgt...................................................................................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-42 bit: 174.0 Len: 157 Query Start:176 Query End:332 Subject Strand: NEGATIVE Subject Start: 742 Subject End: 900 ...............................................................................................................................................................................tgttgaggtgttgatctgtttgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacaggcgcccc--ctcggcggagggatgaaagcctgacgtaattcagttgttaattgtcaattgt..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...............................................................................................................................................................................tgttgagttgttgatttgtttgctgaccgttgtaacagccctgaaagggcgcattaattcagcccaatgtggagcgcagcgaagcgttgggaaaaaaggcatcgcatctcggcggagggctgtaagcctgacgtaattcaattgttaatggttaattgt..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 4.0E-8 bit: 61.9 Len: 59 Query Start:758 Query End:816 Subject Strand: NEGATIVE Subject Start: 495 Subject End: 553 .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagagggacat................................................................................................................................................................................................................................................. .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttaatggtcaattgttaattgttatgcgtggtacacggtatccgagcgctgaggaacat................................................................................................................................................................................................................................................. HSP 4 e-value: 4.0E-8 bit: 61.9 Len: 38 Query Start:344 Query End:381 Subject Strand: NEGATIVE Subject Start: 662 Subject End: 700 .......................................................................................................................................................................................................................................................................................................................................................atccgaacgcaaatttcgcaaat-ggcgcaaatcaacgc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................................atccgaacgcaaatttcgcaaatgggcgcaaatcaacgc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 5 e-value: 4.0E-8 bit: 61.9 Len: 51 Query Start:757 Query End:807 Subject Strand: NEGATIVE Subject Start: 707 Subject End: 757 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgca.......................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gttaatggttaattgtcaattgttatgcgtggtacacggtatccgagcgca.......................................................................................................................................................................................................................................................... HSP 6 e-value: 3.0E-6 bit: 56.0 Len: 47 Query Start:825 Query End:871 Subject Strand: NEGATIVE Subject Start: 42 Subject End: 89 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcaaaggggggaagagcgaagcg-aagggggatgttatcccttcaaa.......................................................................................................................................................................................... ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcaaaggggggaagagcggagcgaaagggggatgtcatcctttcaaa.......................................................................................................................................................................................... Subject: tfor_TF2920_TF2921|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[3117231,3118637]|1407 HSP 1 e-value: 4.0E-85 bit: 317.0 Len: 192 Query Start:527 Query End:718 Subject Strand: NEGATIVE Subject Start: 208 Subject End: 399 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attgacaattaatttcgtcgatgggcctcgggcggtgagctgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtgacagaa................................................................................................................................................................................................................................................................................................................................................... ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attgacaattaatttcgtccatgggcctcgggcggtgagccgatggagcagcgagcagggcgaaagaaaatcaggctgtctgaagcgaagcgagttacctgattttccgacctgcaagtgtcgcgaaggcgtgtgaagcgcacgaagccttgacctttgggttacttttgggtcaagccaaaagtaacagaa................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-34 bit: 149.0 Len: 103 Query Start:168 Query End:270 Subject Strand: NEGATIVE Subject Start: 869 Subject End: 971 .......................................................................................................................................................................tgttgatctgttgaggtgttgatctgtttgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaa................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................tgttgatctgtttagttgttgatctgtttgctgaccgttgtaagagccctgaaagggcgtattaattcagcccaatgcgcagcgaagcgaagcgttggaaaaa................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 1.0E-20 bit: 103.0 Len: 99 Query Start:206 Query End:304 Subject Strand: NEGATIVE Subject Start: 511 Subject End: 610 .............................................................................................................................................................................................................tgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacaggcg-ccccctcggcggagggatgaaagcctga................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. .............................................................................................................................................................................................................tgtaacagccctgaaagggcgcgttaattcagtccaatgtgcagcgaagcgaagcgttgggaaacagggcgaccccctcggcggagggctgaaagcctga................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 4 e-value: 3.0E-15 bit: 85.7 Len: 51 Query Start:720 Query End:770 Subject Strand: NEGATIVE Subject Start: 390 Subject End: 440 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgacatattaatggttaattgtcaatt............................................................................................................................................................................................................................................................................................... ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgacaaattaatggttaattgacaatt............................................................................................................................................................................................................................................................................................... HSP 5 e-value: 7.0E-7 bit: 58.0 Len: 29 Query Start:720 Query End:748 Subject Strand: NEGATIVE Subject Start: 731 Subject End: 759 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgaca..................................................................................................................................................................................................................................................................................................................... ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgaca..................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2914_TF2915|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[3109704,3110561]|858 HSP 1 e-value: 1.0E-82 bit: 309.0 Len: 192 Query Start:527 Query End:718 Subject Strand: NEGATIVE Subject Start: 14 Subject End: 205 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attgacaattaatttcgtcgatgggcctcgggcggtgagctgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtgacagaa................................................................................................................................................................................................................................................................................................................................................... ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attgacaattaattttgtccatgggcctcaggtggtgagccgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcaagcctcgcgaaggcgtgtgaagagcacgaagccttgactttttggttacttttgggtcaagccaaaagtgacagaa................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-44 bit: 182.0 Len: 159 Query Start:176 Query End:334 Subject Strand: NEGATIVE Subject Start: 328 Subject End: 482 ...............................................................................................................................................................................tgttgaggtgttgatctgtttgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacaggc-gccccctcggcggagggatgaaagcctgacgtaattcagttgttaattgtcaattgtta................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...............................................................................................................................................................................tgttgaggtgttgaggtgtttgctgaccgctgtaaaagccctgaaagggcacgttaattcagcccaat-----gtgcagcgaagcgttgggaaaacaggcacccccctcggcggagggctgaaagcctgacgtaattcagttgttaattgtcaatggtta................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 7.0E-10 bit: 67.9 Len: 50 Query Start:721 Query End:770 Subject Strand: NEGATIVE Subject Start: 196 Subject End: 244 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................agattcttcgcttacgctctgaatgacatattaatggttaattgtcaatt............................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................agattcttcgctt-cgctctgaatgacaaattaatggttaattgacaatt............................................................................................................................................................................................................................................................................................... HSP 4 e-value: 3.0E-9 bit: 65.9 Len: 49 Query Start:757 Query End:805 Subject Strand: NEGATIVE Subject Start: 297 Subject End: 345 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacg............................................................................................................................................................................................................................................................ ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gttaattgtcaatggttaatggttatgccgggtacacggaatccgaacg............................................................................................................................................................................................................................................................ Subject: tfor_TF2922_TF2923|surface antigen BspA:hypothetical protein|POSITIVE:POSITIVE|[3121599,3122307]|709 HSP 1 e-value: 4.0E-82 bit: 307.0 Len: 202 Query Start:510 Query End:711 Subject Strand: NEGATIVE Subject Start: 159 Subject End: 366 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................accattgacaattaaccattgacaattaatttcg-------tcgatgggcctcgggcggtgagctgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagt.......................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................accattgacaattaaccattgaccattcatttcggtgttcgtccatgggcctcgggtggtgagccgacggagcagcgagcagggcgaaagaaaatcaggctgtccga-gcgaagcgagttacctgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagt.......................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-14 bit: 83.8 Len: 46 Query Start:720 Query End:765 Subject Strand: NEGATIVE Subject Start: 405 Subject End: 450 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgacatattaatggttaattgt.................................................................................................................................................................................................................................................................................................... ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgacaaattaatggttaattgt.................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 1.0E-14 bit: 83.8 Len: 70 Query Start:720 Query End:789 Subject Strand: NEGATIVE Subject Start: 546 Subject End: 614 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggt............................................................................................................................................................................................................................................................................ ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcatcgctt-cgcgctgaatgacaaattaatggttaattgtcaatggttaattgttatgccgggt............................................................................................................................................................................................................................................................................ HSP 4 e-value: 3.0E-9 bit: 65.9 Len: 41 Query Start:327 Query End:367 Subject Strand: NEGATIVE Subject Start: 521 Subject End: 561 ......................................................................................................................................................................................................................................................................................................................................aattgttatgcgtggttatccgaacgcaaatttcgcaaatg.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ......................................................................................................................................................................................................................................................................................................................................aattgttatgccgggttatccgaacgcaaatttcgcaaatg.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 5 e-value: 3.0E-6 bit: 56.0 Len: 54 Query Start:251 Query End:304 Subject Strand: NEGATIVE Subject Start: 20 Subject End: 75 ..........................................................................................................................................................................................................................................................gaagcgaagcgttgggaaaacagg-cgccccc-tcggcggagggatgaaagcctga................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ..........................................................................................................................................................................................................................................................gaagcgaagcgttggggaaaaagggcgcccccctcggcggagggctgaaagcctga................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: tfor_TF2664_TF2666|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2841791,2841957]|167 HSP 1 e-value: 5.0E-60 bit: 234.0 Len: 166 Query Start:515 Query End:680 Subject Strand: NEGATIVE Subject Start: 3 Subject End: 167 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgacaattaaccattgacaattaatttcgtcgatgggcctcgggcggtgagctgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgac......................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgacaattaaccattgacaattaatttcgtccttgggcctcgggcggtgagccgacggagctgcgagcagggcgaaagaaaatcaggctgtccg-agccaagcgagtcacctgattttctgacctgcaagcctcgcgaaggtgtgtgaagcgcacgaagccttgac......................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1838_TF1839|tRNA/rRNA methyltransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1988806,1989486]|681 HSP 1 e-value: 3.0E-58 bit: 228.0 Len: 190 Query Start:522 Query End:711 Subject Strand: POSITIVE Subject Start: 247 Subject End: 427 .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................taaccattgacaattaatttcgtcgatgggcctcgggcggtgagctgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttac-ttttgggtcaagccaaaagt.......................................................................................................................................................................................................................................................................................................................................................... .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................taaccattgacaatttatttcgtccatgggcctcgggcggtgagccgacgaagcagcgagcagggcgaaagaaaatcaggctgtccg-agccaagcgagttacctgattttccgacctgcaagcgtcgcgaaggcgtg---------cgaagccttgacctttgggttactttttgggtcaagccaaaagt.......................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-25 bit: 119.0 Len: 80 Query Start:715 Query End:794 Subject Strand: POSITIVE Subject Start: 146 Subject End: 225 ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................agaaggagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacg....................................................................................................................................................................................................................................................................... ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................agaaagagattcttcgcttacgctctgaatgacaaattaattgttaattgtcaatggttaattgttatgccgggtacacg....................................................................................................................................................................................................................................................................... HSP 3 e-value: 1.0E-8 bit: 63.9 Len: 32 Query Start:340 Query End:371 Subject Strand: POSITIVE Subject Start: 63 Subject End: 94 ...................................................................................................................................................................................................................................................................................................................................................ggttatccgaacgcaaatttcgcaaatggcgc.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ...................................................................................................................................................................................................................................................................................................................................................ggttatccgaacgcaaatttcgcaaatggcgc.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: tfor_TF0018_TF0019|hypothetical protein:heat shock protein ClpB|POSITIVE:POSITIVE|[12152,12589]|438 HSP 1 e-value: 3.0E-52 bit: 208.0 Len: 176 Query Start:159 Query End:334 Subject Strand: NEGATIVE Subject Start: 8 Subject End: 186 ..............................................................................................................................................................gtgttgaggtgttgatctgttgaggtgttgatctgtttgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacag---gcgccccctcggcggagggatgaaagcctgacgtaattcagttgttaattgtcaattgtta................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..............................................................................................................................................................gtgttgaggtgttgaggtgttgaattgttgaggtgtttgctgaccgttgtaacagccctgaaagggcgcattaattcagcccaatgtggagcgaagcgaagcgttgggaaaaaagggcgccccccctcagcggagggctgaaagcctgacgtaattcagttgttaatggtcaatggtta................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2665_TF2667|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2842296,2842534]|239 HSP 1 e-value: 4.0E-45 bit: 184.0 Len: 133 Query Start:548 Query End:680 Subject Strand: NEGATIVE Subject Start: 3 Subject End: 134 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgggcctcgggcggtgagctgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgac......................................................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgggcctcgggcggtgagccgacggagctgcgagcagggcgaaagaaaatcaggctgtcc-aagccaagcgagtcacctgattttctgacctgcaagcctcgcgaaggtgtgtgaagcgcacgaagccttgac......................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1187_TF1188|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1269933,1270295]|363 HSP 1 e-value: 7.0E-44 bit: 180.0 Len: 126 Query Start:647 Query End:772 Subject Strand: POSITIVE Subject Start: 4 Subject End: 130 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtgacag-aaggagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgt............................................................................................................................................................................................................................................................................................. ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtaacggaaaagagattcatcgcttacgctctgaatgacaaattaatggttaatggttaattgt............................................................................................................................................................................................................................................................................................. Subject: tfor_TF2817_TF2818|hypothetical protein:acetylornithine aminotransferase|POSITIVE:POSITIVE|[3007687,3007878]|192 HSP 1 e-value: 3.0E-43 bit: 178.0 Len: 161 Query Start:711 Query End:871 Subject Strand: POSITIVE Subject Start: 1 Subject End: 161 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgacagaaggagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagagggacat-nnnnnnnnttcaaaggggggaagagcgaagcgaagggggatgttatcccttcaaa.......................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgacggaaagagattcttcgctt-cgctctgaatgacaaattaatggttaattgtcaatggttaattgttatgccgggtacacggtatccgaacgcagaggaacatccgccccccttcaaaggggggaagagcggagcgaagagggatgttatcccttcaaa.......................................................................................................................................................................................... Subject: tfor_TF2745_TF2746|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2928008,2928135]|128 HSP 1 e-value: 1.0E-42 bit: 176.0 Len: 129 Query Start:626 Query End:754 Subject Strand: POSITIVE Subject Start: 1 Subject End: 128 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgattttccgacctgcgagcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtgacagaaggagattcttcgcttacgctctgaatgacatattaa............................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgattttccggcctgcaagcgtcacgagggcgtgcgaagcgcacgaagccttgatcttttggttacttttgggtcaagccaaaagtgacagaaagagattcttcgctt-cgctctgaatgacaaattaa............................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2438_TF2439|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[2616218,2616519]|302 HSP 1 e-value: 6.0E-38 bit: 161.0 Len: 120 Query Start:206 Query End:325 Subject Strand: NEGATIVE Subject Start: 97 Subject End: 217 .............................................................................................................................................................................................................tgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacaggcg-ccccctcggcggagggatgaaagcctgacgtaattcagttgttaattgt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ .............................................................................................................................................................................................................tgtaaaagccctgaaagggcgcattaattcagcccaatgtgtagcgaagcgaagcgttgggaaaacaggcgaccccctcagcggagggctgaaagcctgacataatttaattgttaattgt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: tfor_TF2668_TF2670|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2842794,2842918]|125 HSP 1 e-value: 4.0E-36 bit: 155.0 Len: 126 Query Start:529 Query End:654 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 125 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgacaattaatttcgtcgatgggcctcgggcggtgagctgacggagcagcgagcagggcgaaagaaaatcaggctgtccgaagcgaagcgagttacctgattttccgacctgcgagcgtcgcgaag................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgacaattaatttcgtccttgggcctcgggcggtgagccgacggagctgcgagcaggtcgaaagaaaatcaggctgtccg-agccaagcgagtcacctgattttctgacctgcaagcctcgcgaag................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1762_TF1763|hypothetical protein:K+-dependent Na+/Ca+ exchanger related-protein|POSITIVE:POSITIVE|[1899709,1900545]|837 HSP 1 e-value: 6.0E-35 bit: 151.0 Len: 154 Query Start:160 Query End:313 Subject Strand: NEGATIVE Subject Start: 2 Subject End: 161 ...............................................................................................................................................................tgttgaggtgttgatctgttgaggtgttgatctgttt-gctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacaggcg-----ccccctcggcggagggatgaaagcctgacgtaattca........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ...............................................................................................................................................................tgttgaggtgttgagttgttgaattgttgaggtgtttagctgcccgctgtaaaagccctgaaagggcgcgttaattcagcccaatgtgcagcgaagcgaagcgttgggaaaaaaggcgtccctccccctcggcggagggctgaaagcctgacgtaattca........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: tfor_TF1659_TF1660|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1775270,1775408]|139 HSP 1 e-value: 6.0E-35 bit: 151.0 Len: 119 Query Start:644 Query End:762 Subject Strand: POSITIVE Subject Start: 1 Subject End: 119 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtgacag-aaggagattcttcgcttacgctctgaatgacatattaatggttaat....................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gcgtcgcgaaggcgtgtgaagcgcacgaagccttgacctttgggttacttttgggtcaagccaaaagtaacggaaaagagattcatcgctt-cgctctgaatgataaattaatggttaat....................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2823_TF2824|TPR-containing protein:nucleoside-transporting protein nupG|POSITIVE:POSITIVE|[3014398,3014840]|443 HSP 1 e-value: 4.0E-33 bit: 145.0 Len: 97 Query Start:720 Query End:816 Subject Strand: POSITIVE Subject Start: 149 Subject End: 244 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagagggacat................................................................................................................................................................................................................................................. ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgctt-cgctctgaatgacaaattaatggttaattgtcaggtgttaattgttatgccgggtacacggtatccgaacgcagagggacat................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-16 bit: 89.7 Len: 65 Query Start:317 Query End:381 Subject Strand: POSITIVE Subject Start: 6 Subject End: 70 ............................................................................................................................................................................................................................................................................................................................gttaattgtcaattgttatgcgtggttatccgaacgcaaatttcgcaaatggcgcaaatcaacgc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................................................................................................................................................................................................................................................gttaattgtcaattgttatgccgggttatccgaacgcaaatttcgcaaataacgcgaatcaacgc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 4.0E-11 bit: 71.9 Len: 47 Query Start:825 Query End:871 Subject Strand: POSITIVE Subject Start: 259 Subject End: 306 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcaaaggggggaagagcgaagcgaa-gggggatgttatcccttcaaa.......................................................................................................................................................................................... ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcaaagggaggaagagcgaagcgaaggggggatgttatcccttcaaa.......................................................................................................................................................................................... Subject: tfor_TF2998_TF2999|surface antigen BspA:conserved hypothetical protein|POSITIVE:POSITIVE|[3215212,3215705]|494 HSP 1 e-value: 1.0E-32 bit: 143.0 Len: 138 Query Start:195 Query End:332 Subject Strand: NEGATIVE Subject Start: 181 Subject End: 320 ..................................................................................................................................................................................................ttgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaaca-ggcg-ccccctcggcggagggatgaaagcctgacgtaattcagttgttaattgtcaattgt..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................ttgctgacagctgtaagagccctgaaagggcgtaataattcagcccaatgcgtagcgaagcgaagcgttgggaaaacagggcgaccccctcggcggagggctgaaagcctgacataattcaatggttaatggttaattgt..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-16 bit: 89.7 Len: 49 Query Start:663 Query End:711 Subject Strand: NEGATIVE Subject Start: 60 Subject End: 108 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................agcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagt.......................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................agcgcacgaagccttgacctttgggttacttttgggtcaagccaaaagt.......................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2515_TF2517|outer membrane protein, TonB dependent receptor:hypothetical protein|POSITIVE:POSITIVE|[2694926,2695228]|303 HSP 1 e-value: 2.0E-31 bit: 139.0 Len: 82 Query Start:176 Query End:257 Subject Strand: POSITIVE Subject Start: 183 Subject End: 264 ...............................................................................................................................................................................tgttgaggtgttgatctgtttgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcga................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ...............................................................................................................................................................................tgttgagttgttgatctgtttgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgtggagcgaagcga................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 5.0E-14 bit: 81.8 Len: 41 Query Start:610 Query End:650 Subject Strand: POSITIVE Subject Start: 255 Subject End: 295 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................agcgaagcgagttacctgattttccgacctgcgagcgtcgc....................................................................................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................agcgaagcgagttacctgattttccgacctgcgagcgtcgc....................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF0538_TF0540|hypothetical protein:conserved hypothetical protein; possible surface protein|POSITIVE:POSITIVE|[567196,567425]|230 HSP 1 e-value: 2.0E-31 bit: 139.0 Len: 89 Query Start:660 Query End:748 Subject Strand: POSITIVE Subject Start: 1 Subject End: 90 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtgacag-aaggagattcttcgcttacgctctgaatgaca..................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgaagcgcacgaagccttgacctttgggttacttttgagtcaagccaaaagtgagagaaaggagattcttcgcttacgctctgaatgaca..................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 3.0E-6 bit: 56.0 Len: 32 Query Start:825 Query End:856 Subject Strand: POSITIVE Subject Start: 129 Subject End: 160 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcaaaggggggaagagcgaagcgaaggggga......................................................................................................................................................................................................... ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcaaaggggggaaaagcgaagcgaaggggga......................................................................................................................................................................................................... Subject: tfor_TF1483_TF1484|glycosyltransferase family protein:penicillin binding protein|POSITIVE:POSITIVE|[1578886,1579698]|813 HSP 1 e-value: 9.0E-31 bit: 137.0 Len: 97 Query Start:720 Query End:816 Subject Strand: POSITIVE Subject Start: 270 Subject End: 365 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagagggacat................................................................................................................................................................................................................................................. ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgctt-cgctctgaatgacaaattaatggttaattgtcaattgttaattgttatgccgggtacatggtatccgaccgcagaggaacat................................................................................................................................................................................................................................................. HSP 2 e-value: 5.0E-20 bit: 101.0 Len: 67 Query Start:750 Query End:816 Subject Strand: POSITIVE Subject Start: 1 Subject End: 67 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attaatggttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagagggacat................................................................................................................................................................................................................................................. .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attaatggttaattgtcaattgttaattgttatgccgggtacatggtatccgaccgcagaggaacat................................................................................................................................................................................................................................................. HSP 3 e-value: 2.0E-13 bit: 79.8 Len: 47 Query Start:825 Query End:871 Subject Strand: POSITIVE Subject Start: 85 Subject End: 132 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcaaaggggggaagagcgaagcgaa-gggggatgttatcccttcaaa.......................................................................................................................................................................................... ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcaaaggggggaagagcgaagcgaaggggggatgttatcccttcaaa.......................................................................................................................................................................................... HSP 4 e-value: 7.0E-10 bit: 67.9 Len: 54 Query Start:251 Query End:304 Subject Strand: POSITIVE Subject Start: 146 Subject End: 199 ..........................................................................................................................................................................................................................................................gaagcgaagcgttgggaaaacaggcgccccctcggcggagggatgaaagcctga................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ..........................................................................................................................................................................................................................................................gaagcgaagcattgggaaaacaggcaacccctcagcggagggctgaaagcctga................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: tfor_TF2996_TF2997|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[3211182,3211547]|366 HSP 1 e-value: 1.0E-29 bit: 133.0 Len: 75 Query Start:644 Query End:718 Subject Strand: NEGATIVE Subject Start: 292 Subject End: 366 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gcgtcgcgaaggcgtgtgaagcgcacgaagccttgaccttttggttacttttgggtcaagccaaaagtgacagaa................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gcgtcgcgaaggcgtgtgaagcgcacgaagccttgacctttgggttacttttgggtcaagccaaaagtaacagaa................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-10 bit: 69.9 Len: 59 Query Start:736 Query End:794 Subject Strand: NEGATIVE Subject Start: 228 Subject End: 286 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacg....................................................................................................................................................................................................................................................................... ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gctctgaatgacaaattaattgttaattgtcaatggttaattgttatgcgtggtacacg....................................................................................................................................................................................................................................................................... HSP 3 e-value: 7.0E-7 bit: 58.0 Len: 45 Query Start:750 Query End:794 Subject Strand: NEGATIVE Subject Start: 171 Subject End: 215 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attaatggttaattgtcaattgtcaattgttatgccgggtacacg....................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attaattgttaattgtcaattgtcaatggttatgcgtggtacacg....................................................................................................................................................................................................................................................................... HSP 4 e-value: 3.0E-6 bit: 56.0 Len: 28 Query Start:340 Query End:367 Subject Strand: NEGATIVE Subject Start: 42 Subject End: 69 ...................................................................................................................................................................................................................................................................................................................................................ggttatccgaacgcaaatttcgcaaatg.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ...................................................................................................................................................................................................................................................................................................................................................ggttatccgaacgcaaatttcgcaaatg.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: tfor_TF1848_TF1850|conserved hypothetical protein:Na+/H+-exchanging protein|POSITIVE:POSITIVE|[1998005,1998681]|677 HSP 1 e-value: 1.0E-29 bit: 133.0 Len: 123 Query Start:212 Query End:334 Subject Strand: POSITIVE Subject Start: 78 Subject End: 200 ...................................................................................................................................................................................................................agccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacaggcgccccctcggcggagggatgaaagcctgacgtaattcagttgttaattgtcaattgtta................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................agccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaaagagcgaccccctcagcggagggctgaaagcctgacgtaattcaattgttaattgtcaatggtta................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-28 bit: 129.0 Len: 93 Query Start:720 Query End:812 Subject Strand: POSITIVE Subject Start: 500 Subject End: 592 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagaggg..................................................................................................................................................................................................................................................... ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagaggg..................................................................................................................................................................................................................................................... HSP 3 e-value: 7.0E-16 bit: 87.7 Len: 60 Query Start:757 Query End:816 Subject Strand: POSITIVE Subject Start: 183 Subject End: 242 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagagggacat................................................................................................................................................................................................................................................. ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagaggaacat................................................................................................................................................................................................................................................. Subject: tfor_TF1578_TF1579|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1686477,1687028]|552 HSP 1 e-value: 5.0E-26 bit: 121.0 Len: 97 Query Start:720 Query End:816 Subject Strand: NEGATIVE Subject Start: 380 Subject End: 476 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagagggacat................................................................................................................................................................................................................................................. ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcatcgctcacgctctgaatgacatattaattgttaatggttaattgttaattgttatgcgtggtacacggtatccgagcgcagagggacat................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-16 bit: 89.7 Len: 53 Query Start:720 Query End:772 Subject Strand: NEGATIVE Subject Start: 24 Subject End: 76 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgt............................................................................................................................................................................................................................................................................................. ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgacaaattaatggttaattgttaattgt............................................................................................................................................................................................................................................................................................. HSP 3 e-value: 4.0E-11 bit: 71.9 Len: 47 Query Start:825 Query End:871 Subject Strand: NEGATIVE Subject Start: 316 Subject End: 363 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcaaaggggggaagagcgaagcgaag-ggggatgttatcccttcaaa.......................................................................................................................................................................................... ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcaaaggggggaagagcgaagcgaaggggggatgttaccccttcaaa.......................................................................................................................................................................................... HSP 4 e-value: 4.0E-8 bit: 61.9 Len: 42 Query Start:340 Query End:381 Subject Strand: NEGATIVE Subject Start: 178 Subject End: 220 ...................................................................................................................................................................................................................................................................................................................................................ggttatccgaacgcaaatttcgcaaat-ggcgcaaatcaacgc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................................................................................................................................ggttatccgaacgcaaatttcgcaaatgggcgcgaatcaacgc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2815_TF2816|meso-diaminopimelate D-dehydrogenase:hypothetical protein|POSITIVE:POSITIVE|[3006481,3007064]|584 HSP 1 e-value: 8.0E-25 bit: 117.0 Len: 67 Query Start:208 Query End:274 Subject Strand: NEGATIVE Subject Start: 228 Subject End: 294 ...............................................................................................................................................................................................................taaaagccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacagg............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...............................................................................................................................................................................................................taaaagccctgaaagggcgcattaattcagcccaatgtggagcgaagcgaagcgttgggaaaacagg............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-8 bit: 61.9 Len: 47 Query Start:288 Query End:334 Subject Strand: POSITIVE Subject Start: 464 Subject End: 510 ...............................................................................................................................................................................................................................................................................................gagggatgaaagcctgacgtaattcagttgttaattgtcaattgtta................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...............................................................................................................................................................................................................................................................................................gagggctgaaagcctgacataattcaattgttaatggtcaattgtta................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1841_TF1842|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1992328,1992710]|383 HSP 1 e-value: 5.0E-20 bit: 101.0 Len: 93 Query Start:212 Query End:304 Subject Strand: POSITIVE Subject Start: 163 Subject End: 257 ...................................................................................................................................................................................................................agccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaaca-ggcg-ccccctcggcggagggatgaaagcctga................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ...................................................................................................................................................................................................................agccctgaaagggcgtattaattcagcccaatgtgcagcaaagcgaagcgttgggaaaaaagggcgaccccctcggcggagggctgaaagcctga................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-16 bit: 89.7 Len: 73 Query Start:720 Query End:792 Subject Strand: POSITIVE Subject Start: 54 Subject End: 126 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtaca......................................................................................................................................................................................................................................................................... ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgacaaagtaattgttaattgtcaatggttaatggttatgccggataca......................................................................................................................................................................................................................................................................... HSP 3 e-value: 7.0E-7 bit: 58.0 Len: 29 Query Start:720 Query End:748 Subject Strand: POSITIVE Subject Start: 327 Subject End: 355 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgaca..................................................................................................................................................................................................................................................................................................................... ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgaca..................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2921_TF2922|hypothetical protein:surface antigen BspA|POSITIVE:POSITIVE|[3118851,3119261]|411 HSP 1 e-value: 3.0E-18 bit: 95.6 Len: 64 Query Start:318 Query End:381 Subject Strand: NEGATIVE Subject Start: 206 Subject End: 269 .............................................................................................................................................................................................................................................................................................................................ttaattgtcaattgttatgcgtggttatccgaacgcaaatttcgcaaatggcgcaaatcaacgc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................................................................ttaatggttaattgttatgcgtggttatccgaacgcaaatttcgcaaatgacgcgaatcaacgc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-16 bit: 89.7 Len: 57 Query Start:750 Query End:806 Subject Strand: NEGATIVE Subject Start: 351 Subject End: 407 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attaatggttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgc........................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attaatggttaattgtcaattgttaatggttatgccgggtacacggaatccgaacgc........................................................................................................................................................................................................................................................... HSP 3 e-value: 1.0E-14 bit: 83.8 Len: 46 Query Start:720 Query End:765 Subject Strand: NEGATIVE Subject Start: 255 Subject End: 300 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgacatattaatggttaattgt.................................................................................................................................................................................................................................................................................................... ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgacaaattaatggttaattgt.................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 5.0E-14 bit: 81.8 Len: 45 Query Start:721 Query End:765 Subject Strand: NEGATIVE Subject Start: 83 Subject End: 127 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................agattcttcgcttacgctctgaatgacatattaatggttaattgt.................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................agattcttcgcttacgctctgaatgacaaattaatggttaattgt.................................................................................................................................................................................................................................................................................................... Subject: tfor_TF0684_TF0685|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[730625,730991]|367 HSP 1 e-value: 3.0E-18 bit: 95.6 Len: 64 Query Start:880 Query End:943 Subject Strand: NEGATIVE Subject Start: 184 Subject End: 247 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagagcggtaaaacgaaaaaatctgtgtgaagatttattccccgcaaattgtttctgataaatc.................................................................................................................. ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagagcggtaaaacgaaaaaatctgtgtgaagatttatctcccgcaaattgtttgtaataaatc.................................................................................................................. HSP 2 e-value: 5.0E-14 bit: 81.8 Len: 68 Query Start:735 Query End:802 Subject Strand: NEGATIVE Subject Start: 288 Subject End: 362 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cgctctgaatgacatattaatggttaattgtc-------aattgtcaattgttatgccgggtacacggtatccga............................................................................................................................................................................................................................................................... ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cgctctgaatgacaaattaatggttaattgtcaatggttaattgtcaattgttatgtcgggtacacggtatccga............................................................................................................................................................................................................................................................... HSP 3 e-value: 2.0E-13 bit: 79.8 Len: 64 Query Start:898 Query End:961 Subject Strand: NEGATIVE Subject Start: 42 Subject End: 105 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aaatctgtgtgaagatttattccccgcaaattgtttctgataaatcacagttgtgaattatctc................................................................................................ .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aaatctgtgcgaagatttatctcccgcaaattgtttttaataaatcacagttgtgatttatctc................................................................................................ HSP 4 e-value: 3.0E-12 bit: 75.8 Len: 46 Query Start:898 Query End:943 Subject Strand: NEGATIVE Subject Start: 143 Subject End: 188 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aaatctgtgtgaagatttattccccgcaaattgtttctgataaatc.................................................................................................................. .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aaatctgtgtgaagatttattccccgcaaattgtttgtaataaatc.................................................................................................................. HSP 5 e-value: 1.0E-8 bit: 63.9 Len: 48 Query Start:955 Query End:1002 Subject Strand: NEGATIVE Subject Start: 42 Subject End: 89 ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatctcctgcaaattgtttttaatagatcatagttgtgatttgtctc....................................................... ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatctcccgcaaattgtttttaataaatcacagttgtgatttatctc....................................................... HSP 6 e-value: 2.0E-7 bit: 60.0 Len: 42 Query Start:497 Query End:538 Subject Strand: POSITIVE Subject Start: 298 Subject End: 339 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgtacccggcatgaccattgacaattaaccattgacaattaa....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgtacccgacataacaattgacaattaaccattgacaattaa....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1846_TF1847|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1997076,1997528]|453 HSP 1 e-value: 2.0E-16 bit: 89.7 Len: 49 Query Start:670 Query End:718 Subject Strand: POSITIVE Subject Start: 1 Subject End: 49 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gaagccttgaccttttggttacttttgggtcaagccaaaagtgacagaa................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gaagccttgaccttttggttacttttgggtcaagccaaaagtaacagaa................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 3.0E-9 bit: 65.9 Len: 37 Query Start:832 Query End:868 Subject Strand: POSITIVE Subject Start: 231 Subject End: 267 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gggggaagagcgaagcgaagggggatgttatcccttc............................................................................................................................................................................................. ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gggggaagagcgaagcgaagggggatgttaccccttc............................................................................................................................................................................................. HSP 3 e-value: 2.0E-7 bit: 60.0 Len: 34 Query Start:736 Query End:769 Subject Strand: POSITIVE Subject Start: 56 Subject End: 89 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gctctgaatgacatattaatggttaattgtcaat................................................................................................................................................................................................................................................................................................ ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gctctgaatgacaaattaatggttaattgtcaat................................................................................................................................................................................................................................................................................................ Subject: tfor_TF2816_TF2817|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[3007245,3007497]|253 HSP 1 e-value: 1.0E-14 bit: 83.8 Len: 78 Query Start:717 Query End:794 Subject Strand: POSITIVE Subject Start: 150 Subject End: 226 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aaggagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacg....................................................................................................................................................................................................................................................................... ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aaggagattcttcgcttt-gctctgaatgacaaattaattgttaattgtcaatggtcaattattatgcgtggtacacg....................................................................................................................................................................................................................................................................... HSP 2 e-value: 7.0E-7 bit: 58.0 Len: 41 Query Start:294 Query End:334 Subject Strand: POSITIVE Subject Start: 1 Subject End: 41 .....................................................................................................................................................................................................................................................................................................tgaaagcctgacgtaattcagttgttaattgtcaattgtta................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................tgaaagcctgacataattcaattgttaatggtcaattgtta................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1182_TF1184|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1268999,1269143]|145 HSP 1 e-value: 5.0E-14 bit: 81.8 Len: 57 Query Start:281 Query End:337 Subject Strand: POSITIVE Subject Start: 82 Subject End: 138 ........................................................................................................................................................................................................................................................................................ctcggcggagggatgaaagcctgacgtaattcagttgttaattgtcaattgttatgc................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ........................................................................................................................................................................................................................................................................................ctcggcgaagggctgtaagcctgacgtaattcaattgttaattgtcaattgttatgc................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 2.0E-7 bit: 60.0 Len: 50 Query Start:196 Query End:245 Subject Strand: POSITIVE Subject Start: 5 Subject End: 54 ...................................................................................................................................................................................................tgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ...................................................................................................................................................................................................tgctgaccgctgtaacagccctgaaagggcgagataattcagcccaatgc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: tfor_TF0827_TF0828|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[886980,887229]|250 HSP 1 e-value: 3.0E-9 bit: 65.9 Len: 41 Query Start:287 Query End:327 Subject Strand: POSITIVE Subject Start: 209 Subject End: 249 ..............................................................................................................................................................................................................................................................................................ggagggatgaaagcctgacgtaattcagttgttaattgtca.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..............................................................................................................................................................................................................................................................................................ggagggctgaaagcctgacgtaattcaattgttaattgtca.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-8 bit: 63.9 Len: 40 Query Start:206 Query End:245 Subject Strand: POSITIVE Subject Start: 137 Subject End: 176 .............................................................................................................................................................................................................tgtaaaagccctgaaagggcgcattaattcagcccaatgc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ .............................................................................................................................................................................................................tgtaaaagccctgaaagggcgtaataattcagcccaatgc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: tfor_TF1588_TF1589|hypothetical protein:surface antigen BspA|POSITIVE:POSITIVE|[1702621,1703328]|708 HSP 1 e-value: 2.0E-7 bit: 60.0 Len: 50 Query Start:196 Query End:245 Subject Strand: NEGATIVE Subject Start: 346 Subject End: 395 ...................................................................................................................................................................................................tgctgaccgttgtaaaagccctgaaagggcgcattaattcagcccaatgc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ...................................................................................................................................................................................................tgctgactgctgtaagagccctgaaagggcgtgttaattcagcccaatgc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 3.0E-6 bit: 56.0 Len: 28 Query Start:721 Query End:748 Subject Strand: NEGATIVE Subject Start: 484 Subject End: 511 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................agattcttcgcttacgctctgaatgaca..................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................agattcttcgcttacgctctgaatgaca..................................................................................................................................................................................................................................................................................................................... Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAAGGCCUCUGCGAACAUCAAAAGCAGGGCGCUUGUCUUGUCCAUAAUUUUCAUAAUUUUCACUGGUUUCAAAUAGCAUGCUGACAACCGAUUAUCCAACCGCAAACAACCUUUGCCGCAAAACGAAAAAAAAAUGCCUCAGGCUUACAGCCCUGCAAGUGUUGAGGUGUUGAUCUGUUGAGGUGUUGAUCUGUUUGCUGACCGUUGUAAAAGCCCUGAAAGGGCGCAUUAAUUCAGCCCAAUGCAGAGCGAAGCGAAGCGUUGGGAAAACAGGCGCCCCCUCGGCGGAGGGAUGAAAGCCUGACGUAAUUCAGUUGUUAAUUGUCAAUUGUUAUGCGUGGUUAUCCGAACGCAAAUUUCGCAAAUGGCGCAAAUCAACGCUGUACGCACCGUAGAGACGCAAUGACUUUUGCGAGUAAGCGAGAGCAGAGCCGAAUUUAUUCGAGCUAUGCCGAGCGUGAGCAAAUUGUUAGAAUAAAAUUGCAUCUCUACACCAUGUACCCGGCAUGACCAUUGACAAUUAACCAUUGACAAUUAAUUUCGUCGAUGGGCCUCGGGCGGUGAGCUGACGGAGCAGCGAGCAGGGCGAAAGAAAAUCAGGCUGUCCGAAGCGAAGCGAGUUACCUGAUUUUCCGACCUGCGAGCGUCGCGAAGGCGUGUGAAGCGCACGAAGCCUUGACCUUUUGGUUACUUUUGGGUCAAGCCAAAAGUGACAGAAGGAGAUUCUUCGCUUACGCUCUGAAUGACAUAUUAAUGGUUAAUUGUCAAUUGUCAAUUGUUAUGCCGGGUACACGGUAUCCGAACGCAGAGGGACAUCCCCCCCCUUCAAAGGGGGGAAGAGCGAAGCGAAGGGGGAUGUUAUCCCUUCAAAGGGGGGGGAAGAGCGGUAAAACGAAAAAAUCUGUGUGAAGAUUUAUUCCCCGCAAAUUGUUUCUGAUAAAUCACAGUUGUGAAUUAUCUCCUGCAAAUUGUUUUUAAUAGAUCAUAGUUGUGAUUUGUCUCCCGCAAAGGGGGUUGUCAUCAAUCCACGUGAGGGAUUGGUGUCUUUUCGUUGUCA .....((((((((..........(((((((..((((.((((......................((((((((..........))).)))))...........(((((.....))))).)))).)))).........(((...))).....)))))))..((((...(((((((((((((...((.(((((....(((((........))))).((((.....))))........)))))))...)))).(((..((((((((((.(((...(((((.(.(((((....)))))..)...)))))(((((...((((((........))))))...))))).....))).)))))....)))))......)))..)))))))))..))))...(((((((.(((((...((((((......))))))(((.(((((((....)))).))).)))...((....))................))))).)))))))(((.(((((((((((((((.((((((((((.((.((((((.((((((...((((...(((.(((.....))))))..((((((.((..(((((.((...((((((((((..(..((........))..)..)))))))))))).)))))..))...((((((.((((((...)))))).........(((((((.((((((((((......))))))))))))))))).....))))))....))))))..))))..)))))).)))))).)).)))))))))).))))))))))))))).))).......))))))))(((.(((((((((((..((((((.....((((...(....)....)))).))))))..)))))))))))..........((((((.((((((......))))))..(((((.....((((....(((((((((((..(((((.((((.....((.....)).....)))).)))))..)))))))))))....)))).)))))..(.(((((((((.(....)))))))))).)..))))))))). (-392.20) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UGACAACGAAAAGACACCAAUCCCUCACGUGGAUUGAUGACAACCCCCUUUGCGGGAGACAAAUCACAACUAUGAUCUAUUAAAAACAAUUUGCAGGAGAUAAUUCACAACUGUGAUUUAUCAGAAACAAUUUGCGGGGAAUAAAUCUUCACACAGAUUUUUUCGUUUUACCGCUCUUCCCCCCCCUUUGAAGGGAUAACAUCCCCCUUCGCUUCGCUCUUCCCCCCUUUGAAGGGGGGGGAUGUCCCUCUGCGUUCGGAUACCGUGUACCCGGCAUAACAAUUGACAAUUGACAAUUAACCAUUAAUAUGUCAUUCAGAGCGUAAGCGAAGAAUCUCCUUCUGUCACUUUUGGCUUGACCCAAAAGUAACCAAAAGGUCAAGGCUUCGUGCGCUUCACACGCCUUCGCGACGCUCGCAGGUCGGAAAAUCAGGUAACUCGCUUCGCUUCGGACAGCCUGAUUUUCUUUCGCCCUGCUCGCUGCUCCGUCAGCUCACCGCCCGAGGCCCAUCGACGAAAUUAAUUGUCAAUGGUUAAUUGUCAAUGGUCAUGCCGGGUACAUGGUGUAGAGAUGCAAUUUUAUUCUAACAAUUUGCUCACGCUCGGCAUAGCUCGAAUAAAUUCGGCUCUGCUCUCGCUUACUCGCAAAAGUCAUUGCGUCUCUACGGUGCGUACAGCGUUGAUUUGCGCCAUUUGCGAAAUUUGCGUUCGGAUAACCACGCAUAACAAUUGACAAUUAACAACUGAAUUACGUCAGGCUUUCAUCCCUCCGCCGAGGGGGCGCCUGUUUUCCCAACGCUUCGCUUCGCUCUGCAUUGGGCUGAAUUAAUGCGCCCUUUCAGGGCUUUUACAACGGUCAGCAAACAGAUCAACACCUCAACAGAUCAACACCUCAACACUUGCAGGGCUGUAAGCCUGAGGCAUUUUUUUUUCGUUUUGCGGCAAAGGUUGUUUGCGGUUGGAUAAUCGGUUGUCAGCAUGCUAUUUGAAACCAGUGAAAAUUAUGAAAAUUAUGGACAAGACAAGCGCCCUGCUUUUGAUGUUCGCAGAGGCCUUA .(((.(((((((((((.(((((((....).)))))).))....((((.(((((.(....)..((((......))))................))))).(((((.((((....)))).))))).............))))..................)))))))))...........(((((((((((..(((((.............................)))))..))))))))))).)))(((((((((((((..(((((((((((((((.......((((.(((((((((((((((((.(((((((.....((((((..((((((.....((((..((.((((((((......)))))))).))...))))......)))))))))))).....(((((.(((......(((((.(((((((((((((...(((........)))...)))))))))))...)).)))))..((((......))))....)))..))))).....))))........))).))))))))))))))))).)))))))))))))))))))(((((((((((((......((.....(((((....((..((((.(((.((((....))))))).))))...))......)))))))..))))))))))))).((((((..(((((.(((((.(((.....)))))))).))))).((....))))))))...................)))))..(((((((((.......((((....))))((((((.((((((.(((..((((((((((((((((((.((.(((((........((((.....))))...........))))).....((((............))))..........))..)))))))).).))))..)))))......(((((((..(....((..((((....(((((((.((((....)))))))).))).......))))..))...)..)))))))...)))..)))))).)))))).)))..)))))).))))))))..... (-354.27) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1124 680 631 128 79 tfor:TF2997|5end_hypothetical_protein_3211408..3211638_POSITIVE 1124 680 631 128 79 tfor:TF1578|5end_hypothetical_protein_1686187..1686417_POSITIVE 1092 650 601 72 23 tfor:TF2996|5end_hypothetical_protein_3210802..3211032_POSITIVE 1086 600 551 177 128 tfor:TF2666|5end_hypothetical_protein_2841818..2842048_POSITIVE 1076 690 641 51 2 tfor:TF0685|5end_hypothetical_protein_730852..731082_POSITIVE 1070 680 631 112 63 tfor:TF1588|5end_hypothetical_protein_1702268..1702498_POSITIVE 1030 620 571 52 4 tfor:TF1168|5end_hypothetical_protein_1248755..1248985_POSITIVE 1006 600 551 163 114 tfor:TF2670|5end_hypothetical_protein_2842779..2843009_POSITIVE 1002 870 821 68 17 tfor:TF1167|5end_hypothetical_protein_1248559..1248789_POSITIVE 988 680 631 61 12 tfor:TF0469|5end_hypothetical_protein_486960..487190_POSITIVE 946 710 661 60 11 tfor:TF0468|5end_hypothetical_protein_486929..487159_POSITIVE 913 260 211 231 182 tfor:TF2439|5end_conserved_hypothetical_protein_2616380..2616610_POSITIVE 908 870 821 154 102 tfor:TF0471|5end_conserved_hypothetical_protein_487516..487746_POSITIVE 869 582 541 231 190 tfor:TF2667|5end_hypothetical_protein_2842395..2842625_POSITIVE 851 270 222 223 175 tfor:TF2171|5end_hypothetical_protein_2345485..2345715_POSITIVE 839 239 192 168 120 tfor:TF2641|5end_riboflavin_kinase/FAD_synthase_2809681..2809911_POSITIVE 838 876 832 45 1 tfor:TF2350|5end_hypothetical_protein_2515063..2515293_POSITIVE 780 250 203 225 178 tfor:TF2351|5end_acetate_kinase_2515480..2515710_POSITIVE 772 266 222 225 181 tfor:TF2172|5end_hypothetical_protein_2345822..2346052_POSITIVE 772 266 222 219 175 tfor:TF2173|5end_hypothetical_protein_2345816..2346046_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1151 590 541 120 71 tfor:TF2438|3end_hypothetical_protein_2616157..2616307_POSITIVE 1145 600 551 130 81 tfor:TF1167|3end_hypothetical_protein_1248932..1249082_POSITIVE 1142 589 541 119 71 tfor:TF2921|3end_hypothetical_protein_3118790..3118940_POSITIVE 1124 680 631 95 46 tfor:TF1577|3end_hypothetical_protein_1686234..1686384_POSITIVE 1114 600 551 130 81 tfor:TF2640|3end_hypothetical_protein_2809533..2809683_POSITIVE 1092 590 541 120 71 tfor:TF0468|3end_hypothetical_protein_487188..487338_POSITIVE 1088 680 631 69 20 tfor:TF2994|3end_hypothetical_protein_3210849..3210999_POSITIVE 996 590 543 151 105 tfor:TF0685|3end_hypothetical_protein_731132..731282_POSITIVE 945 300 251 76 22 tfor:TF1762|3end_hypothetical_protein_1899648..1899798_POSITIVE 938 580 531 150 94 tfor:TF0469|3end_hypothetical_protein_487228..487378_POSITIVE 918 609 564 46 1 tfor:TF2666|3end_hypothetical_protein_2842263..2842413_POSITIVE 908 870 821 76 24 tfor:TF0470|3end_hypothetical_protein_487518..487668_POSITIVE 904 300 251 67 16 tfor:TF2922|3end_surface_antigen_BspA_3121538..3121688_POSITIVE 903 320 273 69 20 tfor:TF0018|3end_hypothetical_protein_12091..12241_POSITIVE 887 680 631 116 67 tfor:TF2668|3end_hypothetical_protein_2842733..2842883_POSITIVE 887 680 631 88 39 tfor:TF2667|3end_hypothetical_protein_2842705..2842855_POSITIVE 887 680 631 88 39 tfor:TF2665|3end_hypothetical_protein_2842235..2842385_POSITIVE 887 680 631 88 39 tfor:TF2664|3end_hypothetical_protein_2841730..2841880_POSITIVE 859 260 211 50 1 tfor:TF0958|3end_conserved_hypothetical_protein_1004909..1005059_POSITIVE 833 700 651 59 10 tfor:TF2914|3end_hypothetical_protein_3109643..3109793_POSITIVE