Origin IGS: taaccgccgtgttgccaaggtttgcgtctctacaatatgtaccacgcataaccattgacaattaaccattagagaagagccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaaagagcgaccccctcagcggagggctgaaagcctgacgtaattcaattgttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagaggaacatcccccctccccccttcaaaggggggaaagagcgaaagcgaaggggggatgttatcccttcaaagggggaatgcggtgcggtcagccatcagcaaacagcgtgtggtatgccgtgtaggggcgaacctcagtgttcgccctttttttgtgtggtgtcggcaatatccgaacgcgaatttcgtaaatgggcgcaaatcaacgcaaataactgtgtttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagagggggctgaatgctgacggctgaacgctgactgaaaccttacaatccttgcgatttattctttaccgcaaagaacgcaaaacgattta .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 taaatcgttttgcgttctttgcggtaaagaataaatcgcaaggattgtaaggtttcagtcagcgttcagccgtcagcattcagccccctctgcgctcggattccgtgtacccggcataacaattaaccattgaccattaaccattaatttgtcattcagagcgtcagcgaagaatctcttccctttcccctgcgagattcctcacggtgttcggaatgacaaacacagttatttgcgttgatttgcgcccatttacgaaattcgcgttcggatattgccgacaccacacaaaaaaagggcgaacactgaggttcgcccctacacggcataccacacgctgtttgctgatggctgaccgcaccgcattccccctttgaagggataacatccccccttcgctttcgctctttcccccctttgaaggggggaggggggatgttcctctgcgttcggattccgtgtacccggcataacaattaaccattgacaattaacaattgaattacgtcaggctttcagccctccgctgagggggtcgctctttccccaacacttcgctgcgctccacattgggctgaattaacgcgccctttcagggctcttctctaatggttaattgtcaatggttatgcgtggtacatattgtagagacgcaaaccttggcaacacggcggtta Mask Tandem Repeat Region ================================================ taaccgccgtgttgccaaggtttgcgtctctacaatatgtaccacgcataaccattgacaattaaccattagagaagagccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaaagagcgaccccctcagcggagggctgaaagcctgacgtaattcaattgttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagaggaacatcccccctccccccttcaaaggggggaaagagcgaaagcgaaggggggatgttatcccttcaaagggggaatgcggtgcggtcagccatcagcaaacagcgtgtggtatgccgtgtaggggcgaacctcagtgttcgccctttttttgtgtggtgtcggcaatatccgaacgcgaatttcgtaaatgggcgcaaatcaacgcaaataactgtgtttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagagggggctgaatgctgacggctgaacgctgactgaaaccttacaatccttgcgatttattctttaccgcaaagaacgcaaaacgattta Find is-nt database================================================ Query_seq: TF1848:TF1850|TF1848:TF1850:conserved hypothetical protein:Na+/H+-exchanging protein:->->:1998005..1998681 677 taaccgccgtgttgccaaggtttgcgtctctacaatatgtaccacgcataaccattgacaattaaccattagagaagagccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaaagagcgaccccctcagcggagggctgaaagcctgacgtaattcaattgttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagaggaacatcccccctccccccttcaaaggggggaaagagcgaaagcgaaggggggatgttatcccttcaaagggggaatgcggtgcggtcagccatcagcaaacagcgtgtggtatgccgtgtaggggcgaacctcagtgttcgccctttttttgtgtggtgtcggcaatatccgaacgcgaatttcgtaaatgggcgcaaatcaacgcaaataactgtgtttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagagggggctgaatgctgacggctgaacgctgactgaaaccttacaatccttgcgatttattctttaccgcaaagaacgcaaaacgattta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: TF1848:TF1850|TF1848:TF1850:conserved hypothetical protein:Na+/H+-exchanging protein:->->:1998005..1998681 677 taaccgccgtgttgccaaggtttgcgtctctacaatatgtaccacgcataaccattgacaattaaccattagagaagagccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaaagagcgaccccctcagcggagggctgaaagcctgacgtaattcaattgttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagaggaacatcccccctccccccttcaaaggggggaaagagcgaaagcgaaggggggatgttatcccttcaaagggggaatgcggtgcggtcagccatcagcaaacagcgtgtggtatgccgtgtaggggcgaacctcagtgttcgccctttttttgtgtggtgtcggcaatatccgaacgcgaatttcgtaaatgggcgcaaatcaacgcaaataactgtgtttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagagggggctgaatgctgacggctgaacgctgactgaaaccttacaatccttgcgatttattctttaccgcaaagaacgcaaaacgattta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: TF1848:TF1850|TF1848:TF1850:conserved hypothetical protein:Na+/H+-exchanging protein:->->:1998005..1998681 677 taaccgccgtgttgccaaggtttgcgtctctacaatatgtaccacgcataaccattgacaattaaccattagagaagagccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaaagagcgaccccctcagcggagggctgaaagcctgacgtaattcaattgttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagaggaacatcccccctccccccttcaaaggggggaaagagcgaaagcgaaggggggatgttatcccttcaaagggggaatgcggtgcggtcagccatcagcaaacagcgtgtggtatgccgtgtaggggcgaacctcagtgttcgccctttttttgtgtggtgtcggcaatatccgaacgcgaatttcgtaaatgggcgcaaatcaacgcaaataactgtgtttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagagggggctgaatgctgacggctgaacgctgactgaaaccttacaatccttgcgatttattctttaccgcaaagaacgcaaaacgattta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 taaccgccgtgttgccaaggtttgcgtctctacaatatgtaccacgcataaccattgacaattaaccattagagaagagccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaaagagcgaccccctcagcggagggctgaaagcctgacgtaattcaattgttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagaggaacatcccccctccccccttcaaaggggggaaagagcgaaagcgaaggggggatgttatcccttcaaagggggaatgcggtgcggtcagccatcagcaaacagcgtgtggtatgccgtgtaggggcgaacctcagtgttcgccctttttttgtgtggtgtcggcaatatccgaacgcgaatttcgtaaatgggcgcaaatcaacgcaaataactgtgtttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagagggggctgaatgctgacggctgaacgctgactgaaaccttacaatccttgcgatttattctttaccgcaaagaacgcaaaacgattta Predict ORF larger than 30AA ================================================ Protein_Len: 59 Strand: + Start: 180 End: 356 ................................................................................................................................................................................... M V N C Q W L I V M P G T R N P N A E E H P P S P L Q R G E R A K A K G G C Y P F K G G M R C G Q P S A N S V W Y A V ................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 188 End: 511 ........................................................................................................................................................................................... M S M V N C Y A G Y T E S E R R G T S P L P P S K G G K S E S E G G M L S L Q R G N A V R S A I S K Q R V V C R V G A N ...................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 202 End: 519 ......................................................................................................................................................................................................... M L C R V H G I R T Q R N I P P P P F K G G K E R K R R G D V I P S K G E C G A V S H Q Q T A C G M P C R G E P Q C S P .............................................................................................................................................................. Protein_Len: 41 Strand: + Start: 480 End: 602 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M S Q G K G K R F F A D A L N D K L M V N G Q W L I V M P G T R N P S A E G A E C ........................................................................... Protein_Len: 31 Strand: - Start: 555 End: 647 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... N N H R T C P I R A C L P S F A S P Q V S V S V K C D K R N M .............................. Protein_Len: 32 Strand: - Start: 548 End: 643 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... H N I T I G P V R F G L A S P A S H Q R S F A S Q F R V I R A M .................................. Protein_Len: 32 Strand: - Start: 440 End: 535 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................... R L Y S H K D N R V G H P I E C P F P F L N K A S A R F S L N M .............................................................................................................................................. Protein_Len: 34 Strand: - Start: 326 End: 427 ..................................................................................................................................................................................................................................................................................................................................... G D A F L T H Y A T Y P R V E T N A R K K H P T P L I R V R I E Y M .......................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 304 End: 531 ............................................................................................................................................................................................................................................................................................................... R T P A F R L T R G K K T H H R C Y G F A F K T F P R L D V C I V T N T M G F V T L F R A P S L S S I R R Q R E S H C M .................................................................................................................................................. Protein_Len: 42 Strand: - Start: 201 End: 326 ........................................................................................................................................................................................................ N N H R T C P I R V C L F M G G G G K L P P F S R F R L P S T I G E F P S H P A T M ............................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 35 Strand: - Start: 72 End: 176 ....................................................................... L L A R F P R T L E A W H P A C R L T P S L A V G E A S P Q F G S T M ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 33 Strand: - Start: 1 End: 99 L R R T A L T Q T E V I H V V C L W Q C N V M L S S G Q F P A N M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. taaccgccgtgttgccaaggtttgcgtctctacaatatgtaccacgcataaccattgacaattaaccattagagaagagccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaaagagcgaccccctcagcggagggctgaaagcctgacgtaattcaattgttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagaggaacatcccccctccccccttcaaaggggggaaagagcgaaagcgaaggggggatgttatcccttcaaagggggaatgcggtgcggtcagccatcagcaaacagcgtgtggtatgccgtgtaggggcgaacctcagtgttcgccctttttttgtgtggtgtcggcaatatccgaacgcgaatttcgtaaatgggcgcaaatcaacgcaaataactgtgtttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagagggggctgaatgctgacggctgaacgctgactgaaaccttacaatccttgcgatttattctttaccgcaaagaacgcaaaacgattta Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ taaccgccgtgttgccaaggtttgcgtctctacaatatgtaccacgcataaccattgacaattaaccattagagaagagccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaaagagcgaccccctcagcggagggctgaaagcctgacgtaattcaattgttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagaggaacatcccccctccccccttcaaaggggggaaagagcgaaagcgaaggggggatgttatcccttcaaagggggaatgcggtgcggtcagccatcagcaaacagcgtgtggtatgccgtgtaggggcgaacctcagtgttcgccctttttttgtgtggtgtcggcaatatccgaacgcgaatttcgtaaatgggcgcaaatcaacgcaaataactgtgtttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagagggggctgaatgctgacggctgaacgctgactgaaaccttacaatccttgcgatttattctttaccgcaaagaacgcaaaacgattta Predict TransTerm conf > 70================================================ TransTerm Strand: - Conf: 76 HP_score: -11.5 Tail_Score: -3.21288 Start: 242 End: 276 Full_Region: atccccccttcgctt tcgctctttcccccct ttga aggggggagggggga tgttcctctgcgttc .................................................................................................................................................................................................................................................tcgctctttcccccctttgaaggggggagggggga................................................................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: + Conf: 100 HP_score: -11.6 Tail_Score: -5.74122 Start: 360 End: 381 Full_Region: TGGTATGCCGTGTAG GGGCGAAC CTCAGT GTTCGCCC TTTTTTTGTGTGGTG .......................................................................................................................................................................................................................................................................................................................................................................GGGCGAACCTCAGTGTTCGCCC........................................................................................................................................................................................................................................................................................................ Find igs database================================================ Query_seq: TF1848:TF1850|TF1848:TF1850:conserved hypothetical protein:Na+/H+-exchanging protein:->->:1998005..1998681 677 taaccgccgtgttgccaaggtttgcgtctctacaatatgtaccacgcataaccattgacaattaaccattagagaagagccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaaagagcgaccccctcagcggagggctgaaagcctgacgtaattcaattgttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagaggaacatcccccctccccccttcaaaggggggaaagagcgaaagcgaaggggggatgttatcccttcaaagggggaatgcggtgcggtcagccatcagcaaacagcgtgtggtatgccgtgtaggggcgaacctcagtgttcgccctttttttgtgtggtgtcggcaatatccgaacgcgaatttcgtaaatgggcgcaaatcaacgcaaataactgtgtttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagagggggctgaatgctgacggctgaacgctgactgaaaccttacaatccttgcgatttattctttaccgcaaagaacgcaaaacgattta Intra-Species Hit: Count: 30 Min: 1 Max: 677 Len: 677 Subject: tfor_TF1848_TF1850|conserved hypothetical protein:Na+/H+-exchanging protein|POSITIVE:POSITIVE|[1998005,1998681]|677 HSP 1 e-value: 0.0 bit: 795.0 Len: 422 Query Start:256 Query End:677 Subject Strand: POSITIVE Subject Start: 256 Subject End: 677 ...............................................................................................................................................................................................................................................................ttcaaaggggggaaagagcgaaagcgaaggggggatgttatcccttcaaagggggaatgcggtgcggtcagccatcagcaaacagcgtgtggtatgccgtgtaggggcgaacctcagtgttcgcccnnnnnnngtgtggtgtcggcaatatccgaacgcgaatttcgtaaatgggcgcaaatcaacgcaaataactgtgtttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagagggggctgaatgctgacggctgaacgctgactgaaaccttacaatccttgcgatttattctttaccgcaaagaacgcaaaacgattta ...............................................................................................................................................................................................................................................................ttcaaaggggggaaagagcgaaagcgaaggggggatgttatcccttcaaagggggaatgcggtgcggtcagccatcagcaaacagcgtgtggtatgccgtgtaggggcgaacctcagtgttcgccctttttttgtgtggtgtcggcaatatccgaacgcgaatttcgtaaatgggcgcaaatcaacgcaaataactgtgtttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagagggggctgaatgctgacggctgaacgctgactgaaaccttacaatccttgcgatttattctttaccgcaaagaacgcaaaacgattta HSP 2 e-value: 1.0E-134 bit: 480.0 Len: 242 Query Start:1 Query End:242 Subject Strand: POSITIVE Subject Start: 1 Subject End: 242 taaccgccgtgttgccaaggtttgcgtctctacaatatgtaccacgcataaccattgacaattaaccattagagaagagccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaaagagcgaccccctcagcggagggctgaaagcctgacgtaattcaattgttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagaggaacat................................................................................................................................................................................................................................................................................................................................................................................................................................................... taaccgccgtgttgccaaggtttgcgtctctacaatatgtaccacgcataaccattgacaattaaccattagagaagagccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaaagagcgaccccctcagcggagggctgaaagcctgacgtaattcaattgttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagaggaacat................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 8.0E-18 bit: 93.7 Len: 55 Query Start:537 Query End:591 Subject Strand: POSITIVE Subject Start: 183 Subject End: 237 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagagg...................................................................................... ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagagg...................................................................................... HSP 4 e-value: 8.0E-18 bit: 93.7 Len: 55 Query Start:183 Query End:237 Subject Strand: POSITIVE Subject Start: 537 Subject End: 591 ......................................................................................................................................................................................gttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagagg........................................................................................................................................................................................................................................................................................................................................................................................................................................................ ......................................................................................................................................................................................gttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagagg........................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: tfor_TF1578_TF1579|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1686477,1687028]|552 HSP 1 e-value: 1.0E-47 bit: 192.0 Len: 217 Query Start:256 Query End:472 Subject Strand: NEGATIVE Subject Start: 149 Subject End: 363 ...............................................................................................................................................................................................................................................................ttcaaaggggggaaagagcgaaagcgaaggggggatgttatcccttcaaaggggg-aatgcggtgcggtcagccatcagcaaacagcgtgtggtatgccgtgtaggggcgaacctcagtgttcgcccnnnnnnngtgtggtgtcggcaatatccgaacgcgaatttcgtaaatgggcgcaaatcaacgcaaataactgtgtttgtcattccgaacacc............................................................................................................................................................................................................. ...............................................................................................................................................................................................................................................................ttcaaaggggggaa-gagcgaa-gcgaaggggggatgttaccccttcaaaggggggaatgcagtgcggtaagccgtcagcaaacagcgttcggtgtgccgtgtaggggcgaacctctgtgttcgccctttttttgtgtggtg-cagggttatccgaacgcaaatttcgcaaatgggcgcgaatcaacgcaaataacagtctttgtcattccgaacacc............................................................................................................................................................................................................. HSP 2 e-value: 1.0E-31 bit: 139.0 Len: 137 Query Start:456 Query End:592 Subject Strand: NEGATIVE Subject Start: 384 Subject End: 521 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaa-gagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagaggg..................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttgtcattccgaacgcagtgaggaatctcgcggggtaaaagaaaagagattcatcgctcacgctctgaatgacatattaattgttaatggttaattgttaattgttatgcgtggtacacggtatccgagcgcagaggg..................................................................................... HSP 3 e-value: 3.0E-23 bit: 111.0 Len: 87 Query Start:456 Query End:542 Subject Strand: NEGATIVE Subject Start: 34 Subject End: 121 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaa-gagattcttcgctgacgctctgaatgacaaattaatggttaat....................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttgtcattccgaacgcagtgaggaatctcgcggggtaaaggaaaagagattcttcgcttacgctctgaatgacaaattaatggttaat....................................................................................................................................... HSP 4 e-value: 7.0E-9 bit: 63.9 Len: 64 Query Start:179 Query End:242 Subject Strand: NEGATIVE Subject Start: 380 Subject End: 443 ..................................................................................................................................................................................aattgttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagaggaacat................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................aattgttaatggttaattgttaattgttatgcgtggtacacggtatccgagcgcagagggacat................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2914_TF2915|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[3109704,3110561]|858 HSP 1 e-value: 4.0E-44 bit: 180.0 Len: 154 Query Start:78 Query End:231 Subject Strand: NEGATIVE Subject Start: 297 Subject End: 446 .............................................................................agccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaaaga-gcgaccccctcagcggagggctgaaagcctgacgtaattcaattgttaattgtcaatggttaattgttatgccgggtacacggaatccgaacg.............................................................................................................................................................................................................................................................................................................................................................................................................................................................. .............................................................................agccctgaaagggcacgttaattcagcccaatgt-----gcagcgaagcgttgggaaaacaggcacccccctcggcggagggctgaaagcctgacgtaattcagttgttaattgtcaatggttaatggttatgccgggtacacggaatccgaacg.............................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 3.0E-23 bit: 111.0 Len: 88 Query Start:455 Query End:542 Subject Strand: NEGATIVE Subject Start: 204 Subject End: 290 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaat....................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacaccgtgaggaatctcgcctcgaaaagggaaaagattcttcgct-tcgctctgaatgacaaattaatggttaat....................................................................................................................................... HSP 3 e-value: 2.0E-12 bit: 75.8 Len: 46 Query Start:537 Query End:582 Subject Strand: NEGATIVE Subject Start: 300 Subject End: 345 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gttaatggtcaatggttaattgttatgccgggtacacggaatccga............................................................................................... ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gttaattgtcaatggttaatggttatgccgggtacacggaatccga............................................................................................... Subject: tfor_TF2823_TF2824|TPR-containing protein:nucleoside-transporting protein nupG|POSITIVE:POSITIVE|[3014398,3014840]|443 HSP 1 e-value: 4.0E-41 bit: 170.0 Len: 138 Query Start:455 Query End:592 Subject Strand: POSITIVE Subject Start: 104 Subject End: 240 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagaggg..................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacgcagtgaggaatctcgcggggaaaagggaagagattcttcgctt-cgctctgaatgacaaattaatggttaattgtcaggtgttaattgttatgccgggtacacggtatccgaacgcagaggg..................................................................................... HSP 2 e-value: 1.0E-13 bit: 79.8 Len: 60 Query Start:183 Query End:242 Subject Strand: POSITIVE Subject Start: 185 Subject End: 244 ......................................................................................................................................................................................gttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagaggaacat................................................................................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................gttaattgtcaggtgttaattgttatgccgggtacacggtatccgaacgcagagggacat................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 4.0E-10 bit: 67.9 Len: 66 Query Start:404 Query End:469 Subject Strand: POSITIVE Subject Start: 32 Subject End: 96 ...................................................................................................................................................................................................................................................................................................................................................................................................................tatccgaacgcgaatttcgtaaatgggcgcaaatcaacgcaaataactgtgtttgtcattccgaac................................................................................................................................................................................................................ ...................................................................................................................................................................................................................................................................................................................................................................................................................tatccgaacgcaaatttcgcaaataa-cgcgaatcaacgcaaataactgtgtttgtcattacgaac................................................................................................................................................................................................................ HSP 4 e-value: 2.0E-9 bit: 65.9 Len: 60 Query Start:256 Query End:315 Subject Strand: POSITIVE Subject Start: 259 Subject End: 317 ...............................................................................................................................................................................................................................................................ttcaaaggggggaaagagcgaaagcgaaggggggatgttatcccttc-aaagggggaatgc.......................................................................................................................................................................................................................................................................................................................................................................... ...............................................................................................................................................................................................................................................................ttcaaagggaggaa-gagcgaa-gcgaaggggggatgttatcccttcaaaagggggaatgc.......................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1838_TF1839|tRNA/rRNA methyltransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1988806,1989486]|681 HSP 1 e-value: 6.0E-40 bit: 167.0 Len: 120 Query Start:455 Query End:574 Subject Strand: POSITIVE Subject Start: 106 Subject End: 225 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacg....................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacaccgtgaggaatcccgcggagtaaaagaaagagattcttcgcttacgctctgaatgacaaattaattgttaattgtcaatggttaattgttatgccgggtacacg....................................................................................................... HSP 2 e-value: 7.0E-15 bit: 83.8 Len: 42 Query Start:179 Query End:220 Subject Strand: POSITIVE Subject Start: 184 Subject End: 225 ..................................................................................................................................................................................aattgttaattgtcaatggttaattgttatgccgggtacacg......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................aattgttaattgtcaatggttaattgttatgccgggtacacg......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF0018_TF0019|hypothetical protein:heat shock protein ClpB|POSITIVE:POSITIVE|[12152,12589]|438 HSP 1 e-value: 6.0E-37 bit: 157.0 Len: 130 Query Start:78 Query End:207 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 133 .............................................................................agccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaaagagcg---accccctcagcggagggctgaaagcctgacgtaattcaattgttaattgtcaatggttaattgtta...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................agccctgaaagggcgcattaattcagcccaatgtggagcgaagcgaagcgttgggaaaaaagggcgccccccctcagcggagggctgaaagcctgacgtaattcagttgttaatggtcaatggttaatggtta...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2438_TF2439|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[2616218,2616519]|302 HSP 1 e-value: 1.0E-34 bit: 149.0 Len: 114 Query Start:78 Query End:191 Subject Strand: NEGATIVE Subject Start: 97 Subject End: 211 .............................................................................agccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaaagag-cgaccccctcagcggagggctgaaagcctgacgtaattcaattgttaattgt...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................agccctgaaagggcgcattaattcagcccaatgtgtagcgaagcgaagcgttgggaaaacaggcgaccccctcagcggagggctgaaagcctgacataatttaattgttaattgt...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF0685_TF0686|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[731193,732338]|1146 HSP 1 e-value: 1.0E-34 bit: 149.0 Len: 156 Query Start:78 Query End:233 Subject Strand: NEGATIVE Subject Start: 707 Subject End: 864 .............................................................................agccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaaagagcgacccc--ctcagcggagggctgaaagcctgacgtaattcaattgttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgca............................................................................................................................................................................................................................................................................................................................................................................................................................................................ .............................................................................agccctgaaagggcgcattaattcagcccaatgtggagcgcagcgaagcgttgggaaaaaaggcatcgcatctcggcggagggctgtaagcctgacgtaattcaattgttaatggttaattgtcaattgttatgcgtggtacacggtatccgagcgca............................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-29 bit: 131.0 Len: 136 Query Start:456 Query End:591 Subject Strand: NEGATIVE Subject Start: 500 Subject End: 627 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagagg...................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttgtcattccgaacaccgtgaggaatctcgcggggtaaagggaagagattcatcgct-tcgctctgaatgacaaa-------ttaatggtcaattgttaattgttatgcgtggtacacggtatccgagcgctgagg...................................................................................... HSP 3 e-value: 2.0E-18 bit: 95.6 Len: 68 Query Start:405 Query End:472 Subject Strand: NEGATIVE Subject Start: 633 Subject End: 700 ....................................................................................................................................................................................................................................................................................................................................................................................................................atccgaacgcgaatttcgtaaatgggcgcaaatcaacgcaaataactgtgtttgtcattccgaacacc............................................................................................................................................................................................................. ....................................................................................................................................................................................................................................................................................................................................................................................................................atccgaacgcaaatttcgcaaatgggcgcaaatcaacgcaaataacaatctttgtcattccgaacacc............................................................................................................................................................................................................. HSP 4 e-value: 7.0E-15 bit: 83.8 Len: 62 Query Start:498 Query End:559 Subject Strand: NEGATIVE Subject Start: 148 Subject End: 208 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgt...................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagagattcttcgctt-cgctctgaatgacaaattaatggttaattgtcaattgttaattgt...................................................................................................................... HSP 5 e-value: 1.0E-13 bit: 79.8 Len: 80 Query Start:256 Query End:335 Subject Strand: NEGATIVE Subject Start: 402 Subject End: 480 ...............................................................................................................................................................................................................................................................ttcaaaggggggaaagagcgaaagcgaaggggggatgttatcccttcaaagggggaatgcggtgcggtcagccatcagca...................................................................................................................................................................................................................................................................................................................................................... ...............................................................................................................................................................................................................................................................ttcaaagggaggaaagagcgta-gcgaaagggggatgtcatcctttcaaagggggaatgcagtgcagtcagccgtcagca...................................................................................................................................................................................................................................................................................................................................................... HSP 6 e-value: 3.0E-11 bit: 71.9 Len: 80 Query Start:256 Query End:335 Subject Strand: NEGATIVE Subject Start: 12 Subject End: 89 ...............................................................................................................................................................................................................................................................ttcaaaggggggaaagagcgaaagcgaaggggggatgttatcccttcaaagggggaatgcggtgcggtcagccatcagca...................................................................................................................................................................................................................................................................................................................................................... ...............................................................................................................................................................................................................................................................ttcaaaggggggaa-gagcgga-gcgaaagggggatgtcatcctttcaaagggggaatgcagtgcagtcagccgtcagca...................................................................................................................................................................................................................................................................................................................................................... HSP 7 e-value: 3.0E-8 bit: 61.9 Len: 59 Query Start:184 Query End:242 Subject Strand: NEGATIVE Subject Start: 495 Subject End: 553 .......................................................................................................................................................................................ttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagaggaacat................................................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................ttaatggtcaattgttaattgttatgcgtggtacacggtatccgagcgctgaggaacat................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 8 e-value: 1.0E-7 bit: 60.0 Len: 34 Query Start:38 Query End:71 Subject Strand: POSITIVE Subject Start: 722 Subject End: 755 .....................................tgtaccacgcataaccattgacaattaaccatta.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. .....................................tgtaccacgcataacaattgacaattaaccatta.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 9 e-value: 7.0E-6 bit: 54.0 Len: 51 Query Start:537 Query End:587 Subject Strand: NEGATIVE Subject Start: 707 Subject End: 757 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgca.......................................................................................... ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gttaatggttaattgtcaattgttatgcgtggtacacggtatccgagcgca.......................................................................................... Subject: tfor_TF2817_TF2818|hypothetical protein:acetylornithine aminotransferase|POSITIVE:POSITIVE|[3007687,3007878]|192 HSP 1 e-value: 1.0E-31 bit: 139.0 Len: 94 Query Start:498 Query End:591 Subject Strand: POSITIVE Subject Start: 8 Subject End: 100 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagagg...................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagagattcttcgctt-cgctctgaatgacaaattaatggttaattgtcaatggttaattgttatgccgggtacacggtatccgaacgcagagg...................................................................................... HSP 2 e-value: 3.0E-23 bit: 111.0 Len: 60 Query Start:183 Query End:242 Subject Strand: POSITIVE Subject Start: 46 Subject End: 105 ......................................................................................................................................................................................gttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagaggaacat................................................................................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................gttaattgtcaatggttaattgttatgccgggtacacggtatccgaacgcagaggaacat................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1483_TF1484|glycosyltransferase family protein:penicillin binding protein|POSITIVE:POSITIVE|[1578886,1579698]|813 HSP 1 e-value: 1.0E-31 bit: 139.0 Len: 137 Query Start:455 Query End:591 Subject Strand: POSITIVE Subject Start: 224 Subject End: 360 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacaccgtgaggaatctcgcagggg-aaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagagg...................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacgtagtgaggaatcccgccccggtaaagggaagagattcttcgctt-cgctctgaatgacaaattaatggttaattgtcaattgttaattgttatgccgggtacatggtatccgaccgcagagg...................................................................................... HSP 2 e-value: 5.0E-16 bit: 87.7 Len: 60 Query Start:183 Query End:242 Subject Strand: POSITIVE Subject Start: 8 Subject End: 67 ......................................................................................................................................................................................gttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagaggaacat................................................................................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................gttaattgtcaattgttaattgttatgccgggtacatggtatccgaccgcagaggaacat................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 5.0E-16 bit: 87.7 Len: 60 Query Start:183 Query End:242 Subject Strand: POSITIVE Subject Start: 306 Subject End: 365 ......................................................................................................................................................................................gttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagaggaacat................................................................................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................gttaattgtcaattgttaattgttatgccgggtacatggtatccgaccgcagaggaacat................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 7.0E-15 bit: 83.8 Len: 62 Query Start:530 Query End:591 Subject Strand: POSITIVE Subject Start: 1 Subject End: 62 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagagg...................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attaatggttaattgtcaattgttaattgttatgccgggtacatggtatccgaccgcagagg...................................................................................... HSP 5 e-value: 5.0E-13 bit: 77.8 Len: 55 Query Start:256 Query End:310 Subject Strand: POSITIVE Subject Start: 85 Subject End: 137 ...............................................................................................................................................................................................................................................................ttcaaaggggggaaagagcgaaagcgaaggggggatgttatcccttcaaaggggg............................................................................................................................................................................................................................................................................................................................................................................... ...............................................................................................................................................................................................................................................................ttcaaaggggggaa-gagcgaa-gcgaaggggggatgttatcccttcaaaggggg............................................................................................................................................................................................................................................................................................................................................................................... HSP 6 e-value: 7.0E-6 bit: 54.0 Len: 27 Query Start:144 Query End:170 Subject Strand: POSITIVE Subject Start: 173 Subject End: 199 ...............................................................................................................................................cccctcagcggagggctgaaagcctga........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...............................................................................................................................................cccctcagcggagggctgaaagcctga........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2500_TF2501|ABC transporter, ATP-binding protein:DNA mismatch repair protein|POSITIVE:POSITIVE|[2675363,2676419]|1057 HSP 1 e-value: 9.0E-30 bit: 133.0 Len: 123 Query Start:78 Query End:200 Subject Strand: POSITIVE Subject Start: 212 Subject End: 334 .............................................................................agccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaaagagcgaccccctcagcggagggctgaaagcctgacgtaattcaattgttaattgtcaatggtta............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. .............................................................................agccctgaaagggcgcattaattcagcccaatgcagagcgaagcgaagcgttgggaaaacaggcgccccctcggcggagggatgaaagcctgacgtaattcagttgttaattgtcaattgtta............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 1.0E-28 bit: 129.0 Len: 93 Query Start:500 Query End:592 Subject Strand: POSITIVE Subject Start: 720 Subject End: 812 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcagaggg..................................................................................... ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcttcgcttacgctctgaatgacatattaatggttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagaggg..................................................................................... HSP 3 e-value: 5.0E-16 bit: 87.7 Len: 60 Query Start:183 Query End:242 Subject Strand: POSITIVE Subject Start: 757 Subject End: 816 ......................................................................................................................................................................................gttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcagaggaacat................................................................................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................gttaattgtcaattgtcaattgttatgccgggtacacggtatccgaacgcagagggacat................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 3.0E-8 bit: 61.9 Len: 55 Query Start:256 Query End:310 Subject Strand: POSITIVE Subject Start: 825 Subject End: 876 ...............................................................................................................................................................................................................................................................ttcaaaggggggaaagagcgaaagcgaaggggggatgttatcccttcaaaggggg............................................................................................................................................................................................................................................................................................................................................................................... ...............................................................................................................................................................................................................................................................ttcaaaggggggaa-gagcgaa-gcgaagggg-gatgttatcccttcaaaggggg............................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1841_TF1842|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1992328,1992710]|383 HSP 1 e-value: 5.0E-28 bit: 127.0 Len: 116 Query Start:457 Query End:572 Subject Strand: POSITIVE Subject Start: 11 Subject End: 126 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtaca......................................................................................................... ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgtcattccgaacgcagtgaggaatctcgcgaggaagaggaaagagattcttcgcttacgctctgaatgacaaagtaattgttaattgtcaatggttaatggttatgccggataca......................................................................................................... HSP 2 e-value: 2.0E-18 bit: 95.6 Len: 93 Query Start:78 Query End:170 Subject Strand: POSITIVE Subject Start: 163 Subject End: 257 .............................................................................agccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggg--gaaagagcgaccccctcagcggagggctgaaagcctga........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................agccctgaaagggcgtattaattcagcccaatgtgcagcaaagcgaagcgttgggaaaaaagggcgaccccctcggcggagggctgaaagcctga........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 3.0E-17 bit: 91.7 Len: 101 Query Start:455 Query End:555 Subject Strand: POSITIVE Subject Start: 282 Subject End: 383 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgac-aaattaatggttaatggtcaatggttaa.......................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacgcagtgaggaatctcgcgaggaagaggaaagagattcttcgcttacgctctgaatgacaaaagtaattgtcaattgtcaatggttaa.......................................................................................................................... HSP 4 e-value: 7.0E-9 bit: 63.9 Len: 40 Query Start:179 Query End:218 Subject Strand: POSITIVE Subject Start: 87 Subject End: 126 ..................................................................................................................................................................................aattgttaattgtcaatggttaattgttatgccgggtaca........................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................aattgttaattgtcaatggttaatggttatgccggataca........................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2998_TF2999|surface antigen BspA:conserved hypothetical protein|POSITIVE:POSITIVE|[3215212,3215705]|494 HSP 1 e-value: 9.0E-27 bit: 123.0 Len: 135 Query Start:75 Query End:209 Subject Strand: NEGATIVE Subject Start: 170 Subject End: 306 ..........................................................................aagagccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaaagag--cgaccccctcagcggagggctgaaagcctgacgtaattcaattgttaattgtcaatggttaattgttatg.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..........................................................................aagagccctgaaagggcgtaataattcagcccaatgcgtagcgaagcgaagcgttgggaaaacagggcgaccccctcggcggagggctgaaagcctgacataattcaatggttaatggttaattgtcaattgttatg.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2920_TF2921|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[3117231,3118637]|1407 HSP 1 e-value: 2.0E-24 bit: 115.0 Len: 93 Query Start:78 Query End:170 Subject Strand: NEGATIVE Subject Start: 511 Subject End: 604 .............................................................................agccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaa-agagcgaccccctcagcggagggctgaaagcctga........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................agccctgaaagggcgcgttaattcagtccaatgtgcagcgaagcgaagcgttgggaaacagggcgaccccctcggcggagggctgaaagcctga........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 3.0E-23 bit: 111.0 Len: 76 Query Start:455 Query End:530 Subject Strand: NEGATIVE Subject Start: 729 Subject End: 804 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaa................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacgcagtgaggaatctcacgggggaaagggaagagattcttcgcttacgctctgaatgacaaa................................................................................................................................................... HSP 3 e-value: 2.0E-18 bit: 95.6 Len: 88 Query Start:455 Query End:542 Subject Strand: NEGATIVE Subject Start: 398 Subject End: 485 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaat....................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacgcagtgaggaatcccgtgggaaagaggaaagagattcttcgcttacgctctgaatgacaaattaatggttaat....................................................................................................................................... HSP 4 e-value: 3.0E-14 bit: 81.8 Len: 96 Query Start:75 Query End:170 Subject Strand: NEGATIVE Subject Start: 830 Subject End: 930 ..........................................................................aagagccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaa-----agagcgaccccctcagcggagggctgaaagcctga........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..........................................................................aagagccctgaaagggcgtattaattcagcccaatgcgcagcgaagcgaagcgttggaaaaaaaacagggcaaccccctcagcggagggctgaaagcctga........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 5 e-value: 7.0E-6 bit: 54.0 Len: 57 Query Start:256 Query End:312 Subject Strand: NEGATIVE Subject Start: 105 Subject End: 159 ...............................................................................................................................................................................................................................................................ttcaaaggggggaaagagcgaaagcgaaggggggatgttat-cccttcaaagggggaa............................................................................................................................................................................................................................................................................................................................................................................. ...............................................................................................................................................................................................................................................................ttcaaaggggg--aagagcgaaagcgaag-ggggatgttatccccctcaaagggggaa............................................................................................................................................................................................................................................................................................................................................................................. HSP 6 e-value: 7.0E-6 bit: 54.0 Len: 39 Query Start:263 Query End:301 Subject Strand: NEGATIVE Subject Start: 649 Subject End: 686 ......................................................................................................................................................................................................................................................................gggggaaagagcgaaagcgaaggggggatgttatccctt........................................................................................................................................................................................................................................................................................................................................................................................ ......................................................................................................................................................................................................................................................................gggggaaa-agcggaagcgaaggggggatgttatccctt........................................................................................................................................................................................................................................................................................................................................................................................ Subject: tfor_TF0603_TF0604|glycosyltransferase:hypothetical protein|POSITIVE:POSITIVE|[634899,635524]|626 HSP 1 e-value: 8.0E-24 bit: 113.0 Len: 77 Query Start:259 Query End:335 Subject Strand: POSITIVE Subject Start: 291 Subject End: 366 ..................................................................................................................................................................................................................................................................aaaggggggaaagagcgaaagcgaaggggggatgttatcccttcaaagggggaatgcggtgcggtcagccatcagca...................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................aaaggggggaaagagcgaa-gcaaaggggggatgttatcccttcaaagggggaatgcagtgcggtcagccgtcagca...................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 8.0E-21 bit: 103.0 Len: 88 Query Start:455 Query End:542 Subject Strand: POSITIVE Subject Start: 144 Subject End: 230 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaat....................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacaccgtgaggaatcccgcggggggaagaaaagagattcttcgct-tcgctctgaatgacaaattaattgttaat....................................................................................................................................... HSP 3 e-value: 5.0E-13 bit: 77.8 Len: 67 Query Start:523 Query End:589 Subject Strand: POSITIVE Subject Start: 50 Subject End: 116 ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacggaatccgagcgcaga........................................................................................ ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atgacaaattaattgttaatggtcaattgtcaattgttatgcgtggtacacggtatccgaacgcaga........................................................................................ HSP 4 e-value: 4.0E-10 bit: 67.9 Len: 46 Query Start:197 Query End:242 Subject Strand: POSITIVE Subject Start: 225 Subject End: 270 ....................................................................................................................................................................................................gttaattgttatgccgggtacacggaatccgaacgcagaggaacat................................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................gttaattgttatgcatggtacacggtatccgaacgcagaggaacat................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 5 e-value: 2.0E-9 bit: 65.9 Len: 57 Query Start:179 Query End:235 Subject Strand: POSITIVE Subject Start: 60 Subject End: 116 ..................................................................................................................................................................................aattgttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgcaga.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................aattgttaatggtcaattgtcaattgttatgcgtggtacacggtatccgaacgcaga.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2921_TF2922|hypothetical protein:surface antigen BspA|POSITIVE:POSITIVE|[3118851,3119261]|411 HSP 1 e-value: 3.0E-23 bit: 111.0 Len: 88 Query Start:455 Query End:542 Subject Strand: NEGATIVE Subject Start: 258 Subject End: 345 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaat....................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacgtagtgaggaatctcacggggaagagggaagagattcttcgcttacgctctgaatgacaaattaatggttaat....................................................................................................................................... HSP 2 e-value: 2.0E-18 bit: 95.6 Len: 88 Query Start:455 Query End:542 Subject Strand: NEGATIVE Subject Start: 86 Subject End: 172 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaat....................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacgtagtgaggaatcccgt-ggggaaaggaaaaagattcttcgcttacgctctgaatgacaaattaatggttaat....................................................................................................................................... HSP 3 e-value: 7.0E-15 bit: 83.8 Len: 50 Query Start:183 Query End:232 Subject Strand: NEGATIVE Subject Start: 351 Subject End: 400 ......................................................................................................................................................................................gttaattgtcaatggttaattgttatgccgggtacacggaatccgaacgc............................................................................................................................................................................................................................................................................................................................................................................................................................................................. ......................................................................................................................................................................................gttaattgtcaattgttaatggttatgccgggtacacggaatccgaacgc............................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 4 e-value: 3.0E-14 bit: 81.8 Len: 53 Query Start:530 Query End:582 Subject Strand: NEGATIVE Subject Start: 355 Subject End: 407 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attaatggttaatggtcaatggttaattgttatgccgggtacacggaatccga............................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attaatggttaattgtcaattgttaatggttatgccgggtacacggaatccga............................................................................................... HSP 5 e-value: 4.0E-10 bit: 67.9 Len: 66 Query Start:404 Query End:469 Subject Strand: NEGATIVE Subject Start: 180 Subject End: 244 ...................................................................................................................................................................................................................................................................................................................................................................................................................tatccgaacgcgaatttcgtaaatgggcgcaaatcaacgcaaataactgtgtttgtcattccgaac................................................................................................................................................................................................................ ...................................................................................................................................................................................................................................................................................................................................................................................................................tatccgaacgcaaatttcgcaaatga-cgcgaatcaacgcaaataaccgcgtttgtcattccgaac................................................................................................................................................................................................................ Subject: tfor_TF1762_TF1763|hypothetical protein:K+-dependent Na+/Ca+ exchanger related-protein|POSITIVE:POSITIVE|[1899709,1900545]|837 HSP 1 e-value: 3.0E-23 bit: 111.0 Len: 103 Query Start:78 Query End:180 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 108 .............................................................................agccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaaagag-----cgaccccctcagcggagggctgaaagcctgacgtaattcaa................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. .............................................................................agccctgaaagggcgcgttaattcagcccaatgtgcagcgaagcgaagcgttgggaaaaaaggcgtccctccccctcggcggagggctgaaagcctgacgtaattcaa................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: tfor_TF0467_TF0468|acetyltransferase-related protein:hypothetical protein|POSITIVE:POSITIVE|[486604,487068]|465 HSP 1 e-value: 3.0E-23 bit: 111.0 Len: 123 Query Start:48 Query End:170 Subject Strand: NEGATIVE Subject Start: 281 Subject End: 404 ...............................................ataaccattgacaattaaccattagagaagagccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggggaa-agagcgaccccctcagcggagggctgaaagcctga........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...............................................ataaccattgacaattaacaattggaaaacagccctgaaagggcgtaataattcagcccaatgcgtagcgaagcgaagcgttgggaaacagggcaaccccctcggcggagggctgaaagcctga........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2922_TF2923|surface antigen BspA:hypothetical protein|POSITIVE:POSITIVE|[3121599,3122307]|709 HSP 1 e-value: 3.0E-20 bit: 101.0 Len: 139 Query Start:404 Query End:542 Subject Strand: NEGATIVE Subject Start: 408 Subject End: 545 ...................................................................................................................................................................................................................................................................................................................................................................................................................tatccgaacgcgaatttcgtaaatgggcgcaaatcaacgcaaataactgtgtttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaattaatggttaat....................................................................................................................................... ...................................................................................................................................................................................................................................................................................................................................................................................................................tatccgaacgcaaatttcgcaaatga-cgcgaatggacgcaaataaccccctttgtcattccgaacgtagtgaggaatcccgtggggaagaggaaagagattcttcgcttacgctctgaatgacaaattaatggttaat....................................................................................................................................... HSP 2 e-value: 2.0E-18 bit: 95.6 Len: 72 Query Start:498 Query End:569 Subject Strand: NEGATIVE Subject Start: 546 Subject End: 616 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggt............................................................................................................ .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagagattcatcgctt-cgcgctgaatgacaaattaatggttaattgtcaatggttaattgttatgccgggt............................................................................................................ HSP 3 e-value: 2.0E-9 bit: 65.9 Len: 33 Query Start:183 Query End:215 Subject Strand: NEGATIVE Subject Start: 546 Subject End: 578 ......................................................................................................................................................................................gttaattgtcaatggttaattgttatgccgggt.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ......................................................................................................................................................................................gttaattgtcaatggttaattgttatgccgggt.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 4 e-value: 7.0E-6 bit: 54.0 Len: 52 Query Start:119 Query End:170 Subject Strand: NEGATIVE Subject Start: 20 Subject End: 73 ......................................................................................................................agcgaagtgttggggaaagag--cgaccccctcagcggagggctgaaagcctga........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................agcgaagcgttggggaaaaagggcgcccccctcggcggagggctgaaagcctga........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2816_TF2817|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[3007245,3007497]|253 HSP 1 e-value: 5.0E-19 bit: 97.6 Len: 120 Query Start:455 Query End:574 Subject Strand: POSITIVE Subject Start: 107 Subject End: 226 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaag-agattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacg....................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacacagtgaggaatcccgcgaggaaaaggaaaggagattcttcgcttt-gctctgaatgacaaattaattgttaattgtcaatggtcaattattatgcgtggtacacg....................................................................................................... HSP 2 e-value: 1.0E-13 bit: 79.8 Len: 56 Query Start:160 Query End:215 Subject Strand: POSITIVE Subject Start: 1 Subject End: 56 ...............................................................................................................................................................tgaaagcctgacgtaattcaattgttaattgtcaatggttaattgttatgccgggt.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ...............................................................................................................................................................tgaaagcctgacataattcaattgttaatggtcaattgttaattgttatgcagggt.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: tfor_TF2815_TF2816|meso-diaminopimelate D-dehydrogenase:hypothetical protein|POSITIVE:POSITIVE|[3006481,3007064]|584 HSP 1 e-value: 3.0E-17 bit: 91.7 Len: 62 Query Start:154 Query End:215 Subject Strand: POSITIVE Subject Start: 464 Subject End: 525 .........................................................................................................................................................gagggctgaaagcctgacgtaattcaattgttaattgtcaatggttaattgttatgccgggt.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. .........................................................................................................................................................gagggctgaaagcctgacataattcaattgttaatggtcaattgttaattgttatgcagggt.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-15 bit: 85.7 Len: 55 Query Start:78 Query End:132 Subject Strand: NEGATIVE Subject Start: 236 Subject End: 290 .............................................................................agccctgaaagggcgcgttaattcagcccaatgtggagcgcagcgaagtgttggg................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. .............................................................................agccctgaaagggcgcattaattcagcccaatgtggagcgaagcgaagcgttggg................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: tfor_TF2996_TF2997|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[3211182,3211547]|366 HSP 1 e-value: 2.0E-15 bit: 85.7 Len: 59 Query Start:516 Query End:574 Subject Strand: NEGATIVE Subject Start: 228 Subject End: 286 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacg....................................................................................................... ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gctctgaatgacaaattaattgttaattgtcaatggttaattgttatgcgtggtacacg....................................................................................................... HSP 2 e-value: 4.0E-10 bit: 67.9 Len: 42 Query Start:179 Query End:220 Subject Strand: NEGATIVE Subject Start: 228 Subject End: 269 ..................................................................................................................................................................................aattgttaattgtcaatggttaattgttatgccgggtacacg......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................aattgttaattgtcaatggttaattgttatgcgtggtacacg......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1187_TF1188|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1269933,1270295]|363 HSP 1 e-value: 2.0E-15 bit: 85.7 Len: 77 Query Start:498 Query End:574 Subject Strand: POSITIVE Subject Start: 76 Subject End: 145 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagagattcttcgctgacgctctgaatgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacg....................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagagattcatcgcttacgctctgaatgacaaattaatggtt-------aatggttaattgttatgccgggtacacg....................................................................................................... HSP 2 e-value: 4.0E-7 bit: 58.0 Len: 37 Query Start:184 Query End:220 Subject Strand: POSITIVE Subject Start: 109 Subject End: 145 .......................................................................................................................................................................................ttaattgtcaatggttaattgttatgccgggtacacg......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................ttaatggttaatggttaattgttatgccgggtacacg......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1588_TF1589|hypothetical protein:surface antigen BspA|POSITIVE:POSITIVE|[1702621,1703328]|708 HSP 1 e-value: 1.0E-13 bit: 79.8 Len: 76 Query Start:455 Query End:530 Subject Strand: NEGATIVE Subject Start: 482 Subject End: 557 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacaccgtgaggaatctcgcaggggaaagggaagagattcttcgctgacgctctgaatgacaaa................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgtcattccgaacgcagtgaggaatctcgtgaggaaaaggaaaaagattcttcgcttacgctctgaatgacaaa................................................................................................................................................... HSP 2 e-value: 7.0E-9 bit: 63.9 Len: 36 Query Start:75 Query End:110 Subject Strand: NEGATIVE Subject Start: 347 Subject End: 382 ..........................................................................aagagccctgaaagggcgcgttaattcagcccaatg....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..........................................................................aagagccctgaaagggcgtgttaattcagcccaatg....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2201_TF2202|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2378345,2378821]|477 HSP 1 e-value: 2.0E-12 bit: 75.8 Len: 62 Query Start:49 Query End:110 Subject Strand: NEGATIVE Subject Start: 336 Subject End: 397 ................................................taaccattgacaattaaccattagagaagagccctgaaagggcgcgttaattcagcccaatg....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................taaccattgacaattaaccattaataaacagccctgaaagggcgagataattcagcccaatg....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 7.0E-6 bit: 54.0 Len: 43 Query Start:530 Query End:572 Subject Strand: POSITIVE Subject Start: 373 Subject End: 414 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attaatggttaatggtcaatggttaattgttatgccgggtaca......................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attaatggttaattgtcaatggttaattg-tctgccgggtaca......................................................................................................... Subject: tfor_TF2665_TF2667|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2842296,2842534]|239 HSP 1 e-value: 1.0E-10 bit: 69.9 Len: 51 Query Start:524 Query End:574 Subject Strand: NEGATIVE Subject Start: 189 Subject End: 239 ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgacaaattaatggttaatggtcaatggttaattgttatgccgggtacacg....................................................................................................... ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgacaaattaattgttaattgtcaatggttaattgttatgcgtggtacacg....................................................................................................... HSP 2 e-value: 4.0E-10 bit: 67.9 Len: 42 Query Start:179 Query End:220 Subject Strand: NEGATIVE Subject Start: 189 Subject End: 230 ..................................................................................................................................................................................aattgttaattgtcaatggttaattgttatgccgggtacacg......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................aattgttaattgtcaatggttaattgttatgcgtggtacacg......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1585_TF1586|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1690671,1691110]|440 HSP 1 e-value: 1.0E-10 bit: 69.9 Len: 63 Query Start:48 Query End:110 Subject Strand: NEGATIVE Subject Start: 59 Subject End: 121 ...............................................ataaccattgacaattaaccattagagaagagccctgaaagggcgcgttaattcagcccaatg....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...............................................ataaccattaacaactaacaattggaaaacagccctgaaagggcgtgttaattcagcccaatg....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-7 bit: 58.0 Len: 29 Query Start:142 Query End:170 Subject Strand: NEGATIVE Subject Start: 8 Subject End: 36 .............................................................................................................................................accccctcagcggagggctgaaagcctga........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................accccctcagcggagggctgaaagcctga........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2993_TF2994|SAM-dependent methyltransferase:hypothetical protein|POSITIVE:POSITIVE|[3210478,3210744]|267 HSP 1 e-value: 4.0E-10 bit: 67.9 Len: 42 Query Start:179 Query End:220 Subject Strand: NEGATIVE Subject Start: 223 Subject End: 264 ..................................................................................................................................................................................aattgttaattgtcaatggttaattgttatgccgggtacacg......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................aattgttaattgtcaatggttaattgttatgcgtggtacacg......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-7 bit: 58.0 Len: 45 Query Start:530 Query End:574 Subject Strand: NEGATIVE Subject Start: 223 Subject End: 267 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attaatggttaatggtcaatggttaattgttatgccgggtacacg....................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attaattgttaattgtcaatggttaattgttatgcgtggtacacg....................................................................................................... Subject: tfor_TF1654_TF1655|hypothetical protein:long-chain-fatty-acid-CoA ligase|POSITIVE:POSITIVE|[1768766,1769418]|653 HSP 1 e-value: 3.0E-8 bit: 61.9 Len: 43 Query Start:530 Query End:572 Subject Strand: NEGATIVE Subject Start: 587 Subject End: 629 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attaatggttaatggtcaatggttaattgttatgccgggtaca......................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attaatggtgaattgtcaatggttaattgtcatgccgggtaca......................................................................................................... HSP 2 e-value: 4.0E-7 bit: 58.0 Len: 33 Query Start:186 Query End:218 Subject Strand: NEGATIVE Subject Start: 587 Subject End: 619 .........................................................................................................................................................................................aattgtcaatggttaattgttatgccgggtaca........................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .........................................................................................................................................................................................aattgtcaatggttaattgtcatgccgggtaca........................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF0469_TF0470|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[487289,487392]|104 HSP 1 e-value: 4.0E-7 bit: 58.0 Len: 33 Query Start:38 Query End:70 Subject Strand: POSITIVE Subject Start: 44 Subject End: 76 .....................................tgtaccacgcataaccattgacaattaaccatt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .....................................tgtaccacgcataacaattgacaattaaccatt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 56.0 Len: 32 Query Start:174 Query End:205 Subject Strand: NEGATIVE Subject Start: 64 Subject End: 95 .............................................................................................................................................................................aattcaattgttaattgtcaatggttaattgt........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ .............................................................................................................................................................................aattcagttgttaattgtcaatggttaattgt........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAACCGCCGUGUUGCCAAGGUUUGCGUCUCUACAAUAUGUACCACGCAUAACCAUUGACAAUUAACCAUUAGAGAAGAGCCCUGAAAGGGCGCGUUAAUUCAGCCCAAUGUGGAGCGCAGCGAAGUGUUGGGGAAAGAGCGACCCCCUCAGCGGAGGGCUGAAAGCCUGACGUAAUUCAAUUGUUAAUUGUCAAUGGUUAAUUGUUAUGCCGGGUACACGGAAUCCGAACGCAGAGGAACAUCCCCCCUCCCCCCUUCAAAGGGGGGAAAGAGCGAAAGCGAAGGGGGGAUGUUAUCCCUUCAAAGGGGGAAUGCGGUGCGGUCAGCCAUCAGCAAACAGCGUGUGGUAUGCCGUGUAGGGGCGAACCUCAGUGUUCGCCCUUUUUUUGUGUGGUGUCGGCAAUAUCCGAACGCGAAUUUCGUAAAUGGGCGCAAAUCAACGCAAAUAACUGUGUUUGUCAUUCCGAACACCGUGAGGAAUCUCGCAGGGGAAAGGGAAGAGAUUCUUCGCUGACGCUCUGAAUGACAAAUUAAUGGUUAAUGGUCAAUGGUUAAUUGUUAUGCCGGGUACACGGAAUCCGAGCGCAGAGGGGGCUGAAUGCUGACGGCUGAACGCUGACUGAAACCUUACAAUCCUUGCGAUUUAUUCUUUACCGCAAAGAACGCAAAACGAUUUA .......(((.((((.(((((((..(((.........((((((..(((((((((((((((((((((.(((.(((....((((.....))))((((((.((((((((..(((..(((((......)))))((((..........))))...)))..))))))))....))))))..)))))).)))))))))))))))).......)))))..))))))(((...)))..((((....(((((((((((((((((((....))))))).....((....))..)))))))))))).(((((......))))).))))..(((.((((((.((((((..((((.(((.(.((((((..(((((((((((......))))))))).....))..))))))).)))...(((....(((.(((((((......))).))))...)))......(((((((((..((((((......((((((((((((...............))))))))))))....((((.(.(((((((.(((((.(((.......))).)))))))))))).).))))...)))))).))))))))).))).))))..)))))).)))))).))).)))..)))))))....((.(((((.............))))).))..)))).)))..... (-266.59) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAAAUCGUUUUGCGUUCUUUGCGGUAAAGAAUAAAUCGCAAGGAUUGUAAGGUUUCAGUCAGCGUUCAGCCGUCAGCAUUCAGCCCCCUCUGCGCUCGGAUUCCGUGUACCCGGCAUAACAAUUAACCAUUGACCAUUAACCAUUAAUUUGUCAUUCAGAGCGUCAGCGAAGAAUCUCUUCCCUUUCCCCUGCGAGAUUCCUCACGGUGUUCGGAAUGACAAACACAGUUAUUUGCGUUGAUUUGCGCCCAUUUACGAAAUUCGCGUUCGGAUAUUGCCGACACCACACAAAAAAAGGGCGAACACUGAGGUUCGCCCCUACACGGCAUACCACACGCUGUUUGCUGAUGGCUGACCGCACCGCAUUCCCCCUUUGAAGGGAUAACAUCCCCCCUUCGCUUUCGCUCUUUCCCCCCUUUGAAGGGGGGAGGGGGGAUGUUCCUCUGCGUUCGGAUUCCGUGUACCCGGCAUAACAAUUAACCAUUGACAAUUAACAAUUGAAUUACGUCAGGCUUUCAGCCCUCCGCUGAGGGGGUCGCUCUUUCCCCAACACUUCGCUGCGCUCCACAUUGGGCUGAAUUAACGCGCCCUUUCAGGGCUCUUCUCUAAUGGUUAAUUGUCAAUGGUUAUGCGUGGUACAUAUUGUAGAGACGCAAACCUUGGCAACACGGCGGUUA ..(((((((((((..((((((((((.........))))))))))...((((((((..(((.(((.(((((((((((((..((((....((((.((.((((((.((((.....(((....((((.....))))...((((((((.(((((((((((((.((((..(.(.((.(((((((...............))))))).)).))..)))).))))))))).....))))..)).))))))....)))....)))).)))))).)).))))...(((((................((((((((......)))))))).....)))))........))))..))))))))))))).)))..((((....((((....))))..(((((((((((...((....))....((((((((....)))))))))))))))))))....))))..........(((((((..(((((.......((((((((((((((((.((((.....(((......((((((((........(((((........)))))........((...))........))))))))...))).((((.....)))).......)))).)))))))))))))))))))))..)))))))........)))..))))))))))))...))))))). (-254.87) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1049 300 251 150 101 tfor:TF0471|5end_conserved_hypothetical_protein_487516..487746_POSITIVE 943 300 251 64 16 tfor:TF1167|5end_hypothetical_protein_1248559..1248789_POSITIVE 896 400 351 158 104 tfor:TF1580|5end_conserved_hypothetical_protein;_possible_fibronectin_domain_containing_protein_1687187..1687417_POSITIVE 889 269 225 230 186 tfor:TF1168|5end_hypothetical_protein_1248755..1248985_POSITIVE 845 510 461 73 23 tfor:TF2994|5end_hypothetical_protein_3210605..3210835_POSITIVE 832 510 461 83 33 tfor:TF0470|5end_hypothetical_protein_487253..487483_POSITIVE 818 118 75 205 162 tfor:TF0346|5end_hypothetical_protein_367048..367278_POSITIVE 818 118 75 205 162 tfor:TF0340|5end_hypothetical_protein_363893..364123_POSITIVE 805 130 81 223 174 tfor:TF2172|5end_hypothetical_protein_2345822..2346052_POSITIVE 805 130 81 217 168 tfor:TF2173|5end_hypothetical_protein_2345816..2346046_POSITIVE 803 510 461 149 101 tfor:TF0017|5end_hypothetical_protein_10504..10734_POSITIVE 800 170 121 224 173 tfor:TF2641|5end_riboflavin_kinase/FAD_synthase_2809681..2809911_POSITIVE 797 520 473 223 176 tfor:TF2922|5end_surface_antigen_BspA_3119122..3119352_POSITIVE 797 280 231 225 172 tfor:TF0685|5end_hypothetical_protein_730852..731082_POSITIVE 793 490 441 134 86 tfor:TF2668|5end_hypothetical_protein_2842471..2842701_POSITIVE 793 490 441 58 10 tfor:TF2667|5end_hypothetical_protein_2842395..2842625_POSITIVE 788 117 72 228 184 tfor:TF1175|5end_membrane-fusion_protein_1258140..1258370_POSITIVE 786 125 81 230 186 tfor:TF2439|5end_conserved_hypothetical_protein_2616380..2616610_POSITIVE 785 117 75 226 184 tfor:TF2351|5end_acetate_kinase_2515480..2515710_POSITIVE 772 549 501 217 169 tfor:TF1578|5end_hypothetical_protein_1686187..1686417_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1049 300 251 72 23 tfor:TF0470|3end_hypothetical_protein_487518..487668_POSITIVE 953 170 121 53 1 tfor:TF0018|3end_hypothetical_protein_12091..12241_POSITIVE 945 170 121 83 33 tfor:TF1585|3end_hypothetical_protein_1690610..1690760_POSITIVE 945 170 121 76 26 tfor:TF1584|3end_hypothetical_protein_1690603..1690753_POSITIVE 931 170 121 71 20 tfor:TF2922|3end_surface_antigen_BspA_3121538..3121688_POSITIVE 893 130 81 54 5 tfor:TF0958|3end_conserved_hypothetical_protein_1004909..1005059_POSITIVE 888 328 281 72 25 tfor:TF0685|3end_hypothetical_protein_731132..731282_POSITIVE 869 170 121 80 26 tfor:TF1762|3end_hypothetical_protein_1899648..1899798_POSITIVE 858 320 273 48 1 tfor:TF1166|3end_ABC_transporter,_permease_component_1248603..1248753_POSITIVE 837 510 461 140 90 tfor:TF0017|3end_hypothetical_protein_11231..11381_POSITIVE 805 130 81 113 64 tfor:TF2171|3end_hypothetical_protein_2345792..2345942_POSITIVE 803 510 461 146 98 tfor:TF0016|3end_hypothetical_protein_10581..10731_POSITIVE 772 549 501 85 37 tfor:TF1576|3end_hypothetical_protein_1686135..1686285_POSITIVE 771 248 201 151 104 tfor:TF2639|3end_hypothetical_protein_2809333..2809483_POSITIVE 768 170 121 81 33 tfor:TF0344|3end_hypothetical_protein_366963..367113_POSITIVE 755 280 232 55 1 tfor:TF1169|3end_lipoprotein_ABC_transporter,_permease_component_1251573..1251723_POSITIVE 747 470 421 124 73 tfor:TF1761|3end_hypothetical_protein_1899579..1899729_POSITIVE 745 510 461 60 11 tfor:TF2652|3end_hypothetical_protein_2822122..2822272_POSITIVE 739 120 75 150 105 tfor:TF1588|3end_hypothetical_protein_1702560..1702710_POSITIVE 736 117 75 116 74 tfor:TF1592|3end_hypothetical_protein_1708557..1708707_POSITIVE