Origin IGS: tgattcggcgtgtaccacgcataacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaagaggaggtgttcggaatgacaaagactgttatttgcgttgattcgcgcccatttgcgaaatttgcgttcggataaccctgcaccacacaaaaaaagggcgaacacagaggttcgcccctacacggcacaccgaacgctgtttgctgacggcttaccgcactgcattcccccctttgaaggggtaacatccccccttcgcttcgctcttcccccctttgaaggggggggagggggggatgtccctctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaaagactgtta .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 taacagtctttgtcattccgaacacttcctcttgtcattccgaacgcagtgaggaatctcgcggggtaaaagaaaagagattcatcgctcacgctctgaatgacatattaattgttaatggttaattgttaattgttatgcgtggtacacggtatccgagcgcagagggacatccccccctccccccccttcaaaggggggaagagcgaagcgaaggggggatgttaccccttcaaaggggggaatgcagtgcggtaagccgtcagcaaacagcgttcggtgtgccgtgtaggggcgaacctctgtgttcgccctttttttgtgtggtgcagggttatccgaacgcaaatttcgcaaatgggcgcgaatcaacgcaaataacagtctttgtcattccgaacacctcctcttgtcattccgaacacttcctcttgtcattccgaacgcagtgaggaatctcgcggggtaaaggaaaagagattcttcgcttacgctctgaatgacaaattaatggttaattgttaattgttatgcgtggtacacgccgaatca Mask Tandem Repeat Region ================================================ tgattcggcgtgtaccacgcataacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagactgttatttgcgttgattcgcgcccatttgcgaaatttgcgttcggataaccctgcaccacacaaaaaaagggcgaacacagaggttcgcccctacacggcacaccgaacgctgtttgctgacggcttaccgcactgcattcccccctttgaaggggtaacatccccccttcgcttcgctcttcccccctttgaaggggggggagggggggatgtccctctgcgctcggataccgtgtaccacgcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaaagactgtta Find is-nt database================================================ Query_seq: TF1578:TF1579|TF1578:TF1579:hypothetical protein:hypothetical protein:->->:1686477..1687028 552 tgattcggcgtgtaccacgcataacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaagaggaggtgttcggaatgacaaagactgttatttgcgttgattcgcgcccatttgcgaaatttgcgttcggataaccctgcaccacacaaaaaaagggcgaacacagaggttcgcccctacacggcacaccgaacgctgtttgctgacggcttaccgcactgcattcccccctttgaaggggtaacatccccccttcgcttcgctcttcccccctttgaaggggggggagggggggatgtccctctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaaagactgtta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: TF1578:TF1579|TF1578:TF1579:hypothetical protein:hypothetical protein:->->:1686477..1687028 552 tgattcggcgtgtaccacgcataacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaagaggaggtgttcggaatgacaaagactgttatttgcgttgattcgcgcccatttgcgaaatttgcgttcggataaccctgcaccacacaaaaaaagggcgaacacagaggttcgcccctacacggcacaccgaacgctgtttgctgacggcttaccgcactgcattcccccctttgaaggggtaacatccccccttcgcttcgctcttcccccctttgaaggggggggagggggggatgtccctctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaaagactgtta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: TF1578:TF1579|TF1578:TF1579:hypothetical protein:hypothetical protein:->->:1686477..1687028 552 tgattcggcgtgtaccacgcataacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaagaggaggtgttcggaatgacaaagactgttatttgcgttgattcgcgcccatttgcgaaatttgcgttcggataaccctgcaccacacaaaaaaagggcgaacacagaggttcgcccctacacggcacaccgaacgctgtttgctgacggcttaccgcactgcattcccccctttgaaggggtaacatccccccttcgcttcgctcttcccccctttgaaggggggggagggggggatgtccctctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaaagactgtta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 tgattcggcgtgtaccacgcataacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaagaggaggtgttcggaatgacaaagactgttatttgcgttgattcgcgcccatttgcgaaatttgcgttcggataaccctgcaccacacaaaaaaagggcgaacacagaggttcgcccctacacggcacaccgaacgctgtttgctgacggcttaccgcactgcattcccccctttgaaggggtaacatccccccttcgcttcgctcttcccccctttgaaggggggggagggggggatgtccctctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaaagactgtta Predict ORF larger than 30AA ================================================ Protein_Len: 31 Strand: + Start: 45 End: 137 ............................................ M C H S E R K R R I S F P L P R E I P H C V R N D K R K C S E ............................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 36 Strand: + Start: 52 End: 159 ................................................... M Q S V S E E S L F L Y P A R F L T A F G M T R G S V R N D K R R C S E ......................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 44 Strand: + Start: 194 End: 325 ................................................................................................................................................................................................. M C E I C V R I T L H H T K K G R T Q R F A P T R H T E R C L L T A Y R T A F P P L K G ................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 169 End: 414 ........................................................................................................................................................................ M L F A L I R A H L R N L R S D N P A P H K K R A N T E V R P Y T A H R T L F A D G L P H C I P P F E G V T S P L R F A .......................................................................................................................................... Protein_Len: 33 Strand: + Start: 452 End: 550 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M Q S V S D E S L F F Y P A R F L T A F G M T R G S V R N D K D C .. Protein_Len: 36 Strand: - Start: 431 End: 538 .............................................................................................................................................................................................................................................................................................................................................................................................................................................. G N V I L I D N L A H A I F R K E K V G R S E E S R E S H C S S T N P M .............. Protein_Len: 41 Strand: - Start: 298 End: 420 ......................................................................................................................................................................................................................................................................................................... R V A N G G K F P Y C G G K A E S K G G K F P P S P P I D R Q A R I G H V V C L M .................................................................................................................................... Protein_Len: 55 Strand: - Start: 264 End: 428 ....................................................................................................................................................................................................................................................................... V A C R V S N A S P K G C Q M G G K S P T V D G R R K A R G G K S P P P P P S T G R R E S V T Y W A Y C N V M ............................................................................................................................ Protein_Len: 33 Strand: - Start: 175 End: 273 .............................................................................................................................................................................. K R Q N A G M Q S I Q T R I V R C W V F F P R V C L N A G V R C M ....................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 104 End: 427 ....................................................................................................... L P E G R C P V G F A T Q Q R S V A S C E G R Q L P L M G G E S R E E G R Q L P P L P P H G E A S P Y R T G R M V I L M ............................................................................................................................. Protein_Len: 54 Strand: - Start: 87 End: 248 ...................................................................................... G A L N R V A N P I V L P L T R F S L L L H E S H C L S N N A N I R A W K R F K R E S L G A G C L F L A F M ................................................................................................................................................................................................................................................................................................................ Protein_Len: 45 Strand: - Start: 31 End: 165 .............................. C N V M L K D N L A Y A F F R K E K V G R S E E S R E S H C S S T N P I V L P P T R F S M ................................................................................................................................................................................................................................................................................................................................................................................................... tgattcggcgtgtaccacgcataacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaagaggaggtgttcggaatgacaaagactgttatttgcgttgattcgcgcccatttgcgaaatttgcgttcggataaccctgcaccacacaaaaaaagggcgaacacagaggttcgcccctacacggcacaccgaacgctgtttgctgacggcttaccgcactgcattcccccctttgaaggggtaacatccccccttcgcttcgctcttcccccctttgaaggggggggagggggggatgtccctctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaaagactgtta Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ tgattcggcgtgtaccacgcataacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaagaggaggtgttcggaatgacaaagactgttatttgcgttgattcgcgcccatttgcgaaatttgcgttcggataaccctgcaccacacaaaaaaagggcgaacacagaggttcgcccctacacggcacaccgaacgctgtttgctgacggcttaccgcactgcattcccccctttgaaggggtaacatccccccttcgcttcgctcttcccccctttgaaggggggggagggggggatgtccctctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaaagactgtta Predict TransTerm conf > 70================================================ TransTerm Strand: - Conf: 100 HP_score: -11.6 Tail_Score: -5.74122 Start: 239 End: 260 Full_Region: cggtgtgccgtgtag gggcgaac ctctgt gttcgccc tttttttgtgtggtg ..............................................................................................................................................................................................................................................gggcgaacctctgtgttcgccc.................................................................................................................................................................................................................................................................................................... Find igs database================================================ Query_seq: TF1578:TF1579|TF1578:TF1579:hypothetical protein:hypothetical protein:->->:1686477..1687028 552 tgattcggcgtgtaccacgcataacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaagaggaggtgttcggaatgacaaagactgttatttgcgttgattcgcgcccatttgcgaaatttgcgttcggataaccctgcaccacacaaaaaaagggcgaacacagaggttcgcccctacacggcacaccgaacgctgtttgctgacggcttaccgcactgcattcccccctttgaaggggtaacatccccccttcgcttcgctcttcccccctttgaaggggggggagggggggatgtccctctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaaagactgtta Intra-Species Hit: Count: 35 Min: 1 Max: 552 Len: 552 Subject: tfor_TF1578_TF1579|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1686477,1687028]|552 HSP 1 e-value: 0.0 bit: 678.0 Len: 363 Query Start:1 Query End:363 Subject Strand: POSITIVE Subject Start: 1 Subject End: 363 tgattcggcgtgtaccacgcataacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaagaggaggtgttcggaatgacaaagactgttatttgcgttgattcgcgcccatttgcgaaatttgcgttcggataaccctgcaccacacnnnnnnngggcgaacacagaggttcgcccctacacggcacaccgaacgctgtttgctgacggcttaccgcactgcattcccccctttgaaggggtaacatccccccttcgcttcgctcttcccccctttgaa............................................................................................................................................................................................. tgattcggcgtgtaccacgcataacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaagaggaggtgttcggaatgacaaagactgttatttgcgttgattcgcgcccatttgcgaaatttgcgttcggataaccctgcaccacacaaaaaaagggcgaacacagaggttcgcccctacacggcacaccgaacgctgtttgctgacggcttaccgcactgcattcccccctttgaaggggtaacatccccccttcgcttcgctcttcccccctttgaa............................................................................................................................................................................................. HSP 2 e-value: 4.0E-93 bit: 343.0 Len: 173 Query Start:380 Query End:552 Subject Strand: POSITIVE Subject Start: 380 Subject End: 552 ...........................................................................................................................................................................................................................................................................................................................................................................................atgtccctctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaaagactgtta ...........................................................................................................................................................................................................................................................................................................................................................................................atgtccctctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaaagactgtta HSP 3 e-value: 1.0E-49 bit: 198.0 Len: 142 Query Start:402 Query End:543 Subject Strand: POSITIVE Subject Start: 9 Subject End: 143 .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaa......... .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaacaattaacc-------attaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaa......... HSP 4 e-value: 1.0E-49 bit: 198.0 Len: 135 Query Start:9 Query End:143 Subject Strand: POSITIVE Subject Start: 402 Subject End: 543 ........cgtgtaccacgcataacaattaacaattaacc-------attaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaa......................................................................................................................................................................................................................................................................................................................................................................................................................... ........cgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaa......................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 5 e-value: 2.0E-14 bit: 81.8 Len: 45 Query Start:508 Query End:552 Subject Strand: POSITIVE Subject Start: 130 Subject End: 174 ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gttcggaatgacaagaggaagtgttcggaatgacaaagactgtta ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gttcggaatgacaagaggaggtgttcggaatgacaaagactgtta HSP 6 e-value: 2.0E-14 bit: 81.8 Len: 45 Query Start:130 Query End:174 Subject Strand: POSITIVE Subject Start: 508 Subject End: 552 .................................................................................................................................gttcggaatgacaagaggaggtgttcggaatgacaaagactgtta.......................................................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................gttcggaatgacaagaggaagtgttcggaatgacaaagactgtta.......................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1848_TF1850|conserved hypothetical protein:Na+/H+-exchanging protein|POSITIVE:POSITIVE|[1998005,1998681]|677 HSP 1 e-value: 9.0E-48 bit: 192.0 Len: 215 Query Start:149 Query End:363 Subject Strand: NEGATIVE Subject Start: 256 Subject End: 472 ....................................................................................................................................................ggtgttcggaatgacaaagactgttatttgcgttgattcgcgcccatttgcgaaatttgcgttcggataaccctg-caccacacnnnnnnngggcgaacacagaggttcgcccctacacggcacaccgaacgctgtttgctgacggcttaccgcactgcattcccccctttgaaggggtaacatccccccttcgc-ttcgctc-ttcccccctttgaa............................................................................................................................................................................................. ....................................................................................................................................................ggtgttcggaatgacaaacacagttatttgcgttgatttgcgcccatttacgaaattcgcgttcggatattgccgacaccacacaaaaaaagggcgaacactgaggttcgcccctacacggcataccacacgctgtttgctgatggctgaccgcaccgcatt-ccccctttgaagggataacatccccccttcgctttcgctctttcccccctttgaa............................................................................................................................................................................................. HSP 2 e-value: 1.0E-31 bit: 139.0 Len: 138 Query Start:384 Query End:521 Subject Strand: NEGATIVE Subject Start: 456 Subject End: 592 ...............................................................................................................................................................................................................................................................................................................................................................................................ccctctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaa............................... ...............................................................................................................................................................................................................................................................................................................................................................................................ccctctgcgctcggattccgtgtacccggcataacaattaaccattgaccattaaccattaatttgtcattcagagcgtcagcgaagaatctc-ttccctttcccctgcgagattcctcacggtgttcggaatgacaa............................... HSP 3 e-value: 3.0E-23 bit: 111.0 Len: 88 Query Start:34 Query End:121 Subject Strand: NEGATIVE Subject Start: 456 Subject End: 542 .................................attaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... .................................attaaccattaatttgtcattcagagcgtcagcgaagaatctc-ttccctttcccctgcgagattcctcacggtgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 6.0E-9 bit: 63.9 Len: 64 Query Start:380 Query End:443 Subject Strand: NEGATIVE Subject Start: 179 Subject End: 242 ...........................................................................................................................................................................................................................................................................................................................................................................................atgtccctctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaatt............................................................................................................. ...........................................................................................................................................................................................................................................................................................................................................................................................atgttcctctgcgttcggattccgtgtacccggcataacaattaaccattgacaattaacaatt............................................................................................................. Subject: tfor_TF0685_TF0686|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[731193,732338]|1146 HSP 1 e-value: 1.0E-46 bit: 188.0 Len: 135 Query Start:9 Query End:143 Subject Strand: POSITIVE Subject Start: 517 Subject End: 649 ........cgtgtaccacgcataacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaa......................................................................................................................................................................................................................................................................................................................................................................................................................... ........cgtgtaccacgcataacaattaacaattgaccattaatttgtcattcagagcg-aagcgatgaatctcttc-cctttaccccgcgagattcctcacggtgttcggaatgacaagaggaggtgttcggaatgacaa......................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 8.0E-42 bit: 172.0 Len: 173 Query Start:380 Query End:552 Subject Strand: POSITIVE Subject Start: 495 Subject End: 658 ...........................................................................................................................................................................................................................................................................................................................................................................................atgtccctctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaaagactgtta ...........................................................................................................................................................................................................................................................................................................................................................................................atgttcctcagcgctcggataccgtgtaccacgcataacaattaacaattgaccattaa-------tttgtcattcagagcga-agcgatgaatctcttcccttt-accccgcgagattcctcacggtgttcggaatgacaagaggaggtgttcggaatgacaaagattgtta HSP 3 e-value: 3.0E-38 bit: 161.0 Len: 89 Query Start:128 Query End:216 Subject Strand: POSITIVE Subject Start: 612 Subject End: 700 ...............................................................................................................................gtgttcggaatgacaagaggaggtgttcggaatgacaaagactgttatttgcgttgattcgcgcccatttgcgaaatttgcgttcggat................................................................................................................................................................................................................................................................................................................................................ ...............................................................................................................................gtgttcggaatgacaagaggaggtgttcggaatgacaaagattgttatttgcgttgatttgcgcccatttgcgaaatttgcgttcggat................................................................................................................................................................................................................................................................................................................................................ HSP 4 e-value: 3.0E-20 bit: 101.0 Len: 55 Query Start:389 Query End:443 Subject Strand: POSITIVE Subject Start: 707 Subject End: 761 ....................................................................................................................................................................................................................................................................................................................................................................................................tgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaatt............................................................................................................. ....................................................................................................................................................................................................................................................................................................................................................................................................tgcgctcggataccgtgtaccacgcataacaattgacaattaaccattaacaatt............................................................................................................. HSP 5 e-value: 6.0E-18 bit: 93.7 Len: 59 Query Start:22 Query End:80 Subject Strand: POSITIVE Subject Start: 153 Subject End: 210 .....................taacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctctttt........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ .....................taacaattgacaattaaccattaatttgtcattcagagcg-aagcgaagaatctctttt........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 6 e-value: 2.0E-15 bit: 85.7 Len: 79 Query Start:285 Query End:363 Subject Strand: POSITIVE Subject Start: 12 Subject End: 89 ............................................................................................................................................................................................................................................................................................tgctgacggcttaccgcactgcattcccccctttgaaggggtaacatccccccttcgcttcgctcttcccccctttgaa............................................................................................................................................................................................. ............................................................................................................................................................................................................................................................................................tgctgacggctgactgcactgcattcccc-ctttgaaaggatgacatccccctttcgctccgctcttcccccctttgaa............................................................................................................................................................................................. HSP 7 e-value: 6.0E-15 bit: 83.8 Len: 66 Query Start:380 Query End:445 Subject Strand: POSITIVE Subject Start: 104 Subject End: 169 ...........................................................................................................................................................................................................................................................................................................................................................................................atgtccctctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaa........................................................................................................... ...........................................................................................................................................................................................................................................................................................................................................................................................atgttcctcagcgctcggataccgtgtatcacgcataacaattgacaattaacaattgacaattaa........................................................................................................... HSP 8 e-value: 6.0E-12 bit: 73.8 Len: 92 Query Start:272 Query End:363 Subject Strand: POSITIVE Subject Start: 389 Subject End: 480 ...............................................................................................................................................................................................................................................................................accgaacgctgtttgctgacggcttaccgcactgcattcccccctttgaaggggtaacatccccccttcgcttcgctc-ttcccccctttgaa............................................................................................................................................................................................. ...............................................................................................................................................................................................................................................................................accgaacgctgaatgctgacggctgactgcactgcatt-ccccctttgaaaggatgacatccccctttcgctacgctctttcctccctttgaa............................................................................................................................................................................................. HSP 9 e-value: 1.0E-9 bit: 65.9 Len: 37 Query Start:9 Query End:45 Subject Strand: POSITIVE Subject Start: 720 Subject End: 756 ........cgtgtaccacgcataacaattaacaattaaccattaa........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ........cgtgtaccacgcataacaattgacaattaaccattaa........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2823_TF2824|TPR-containing protein:nucleoside-transporting protein nupG|POSITIVE:POSITIVE|[3014398,3014840]|443 HSP 1 e-value: 5.0E-34 bit: 147.0 Len: 142 Query Start:380 Query End:521 Subject Strand: NEGATIVE Subject Start: 105 Subject End: 244 ...........................................................................................................................................................................................................................................................................................................................................................................................atgtccctctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaa............................... ...........................................................................................................................................................................................................................................................................................................................................................................................atgtccctctgcgttcggataccgtgtacccggcataacaattaacacctgacaattaaccattaatttgtcattcagagcg-aagcgaagaatctcttccctttt-ccccgcgagattcctcactgcgttcggaatgacaa............................... HSP 2 e-value: 7.0E-30 bit: 133.0 Len: 91 Query Start:31 Query End:121 Subject Strand: NEGATIVE Subject Start: 105 Subject End: 193 ..............................acaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... ..............................acaattaaccattaatttgtcattcagagcg-aagcgaagaatctcttc-ccttttccccgcgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 4.0E-19 bit: 97.6 Len: 61 Query Start:303 Query End:363 Subject Strand: NEGATIVE Subject Start: 259 Subject End: 319 ..............................................................................................................................................................................................................................................................................................................ctgcattcccccctttgaaggggtaacatccccccttcgcttcgctcttcccccctttgaa............................................................................................................................................................................................. ..............................................................................................................................................................................................................................................................................................................ctgcattcccccttttgaagggataacatccccccttcgcttcgctcttcctccctttgaa............................................................................................................................................................................................. HSP 4 e-value: 2.0E-18 bit: 95.6 Len: 92 Query Start:130 Query End:221 Subject Strand: NEGATIVE Subject Start: 28 Subject End: 118 .................................................................................................................................gttcggaatgacaagaggaggtgttcggaatgacaaagactgttatttgcgttgattcgcgcccatttgcgaaatttgcgttcggataaccc........................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................gttcggaatgacaaagggtggcgttcgtaatgacaaacacagttatttgcgttgattcgcg-ttatttgcgaaatttgcgttcggataaccc........................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2921_TF2922|hypothetical protein:surface antigen BspA|POSITIVE:POSITIVE|[3118851,3119261]|411 HSP 1 e-value: 5.0E-31 bit: 137.0 Len: 143 Query Start:1 Query End:143 Subject Strand: POSITIVE Subject Start: 60 Subject End: 193 tgattcggcgtgtaccacgcataacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaa......................................................................................................................................................................................................................................................................................................................................................................................................................... tgattcggcgtgtaccacgcataac-------aattaaccattaatttgtcattcagagcgtaagcgaagaatct-ttttccttt-ccccacgggattcctcactacgttcggaatgacaaagggtggcgttcggaatgacaa......................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-28 bit: 129.0 Len: 93 Query Start:29 Query End:121 Subject Strand: POSITIVE Subject Start: 253 Subject End: 344 ............................taacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................taacaattaaccattaatttgtcattcagagcgtaagcgaagaatctc-ttccctcttccccgtgagattcctcactacgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 3.0E-20 bit: 101.0 Len: 91 Query Start:130 Query End:220 Subject Strand: POSITIVE Subject Start: 158 Subject End: 247 .................................................................................................................................gttcggaatgacaagaggaggtgttcggaatgacaaagactgttatttgcgttgattcgcgcccatttgcgaaatttgcgttcggataacc............................................................................................................................................................................................................................................................................................................................................ .................................................................................................................................gttcggaatgacaaagggtggcgttcggaatgacaaacgcggttatttgcgttgattcgcg-tcatttgcgaaatttgcgttcggataacc............................................................................................................................................................................................................................................................................................................................................ HSP 4 e-value: 1.0E-16 bit: 89.7 Len: 116 Query Start:429 Query End:544 Subject Strand: POSITIVE Subject Start: 81 Subject End: 194 ............................................................................................................................................................................................................................................................................................................................................................................................................................................taaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaagaggaagtgttcggaatgacaaa........ ............................................................................................................................................................................................................................................................................................................................................................................................................................................taacaattaaccattaatttgtcattcagagcgtaagcgaagaatctttttccttt--ccccacgggattcctcactacgttcggaatgacaaagggtggcgttcggaatgacaaa........ HSP 5 e-value: 1.0E-16 bit: 89.7 Len: 93 Query Start:429 Query End:521 Subject Strand: POSITIVE Subject Start: 253 Subject End: 344 ............................................................................................................................................................................................................................................................................................................................................................................................................................................taaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaa............................... ............................................................................................................................................................................................................................................................................................................................................................................................................................................taacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttccctctt-ccccgtgagattcctcactacgttcggaatgacaa............................... Subject: tfor_TF2922_TF2923|surface antigen BspA:hypothetical protein|POSITIVE:POSITIVE|[3121599,3122307]|709 HSP 1 e-value: 7.0E-30 bit: 133.0 Len: 121 Query Start:1 Query End:121 Subject Strand: POSITIVE Subject Start: 382 Subject End: 494 tgattcggcgtgtaccacgcataacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... tgattcggcgtgtaccacgcataac-------aattaaccattaatttgtcattcagagcgtaagcgaagaatctc-tttcctcttccccacgggattcctcactacgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-16 bit: 89.7 Len: 93 Query Start:429 Query End:521 Subject Strand: POSITIVE Subject Start: 403 Subject End: 494 ............................................................................................................................................................................................................................................................................................................................................................................................................................................taaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaa............................... ............................................................................................................................................................................................................................................................................................................................................................................................................................................taacaattaaccattaatttgtcattcagagcgtaagcgaagaatctctttcctctt-ccccacgggattcctcactacgttcggaatgacaa............................... HSP 3 e-value: 1.0E-12 bit: 75.8 Len: 70 Query Start:152 Query End:221 Subject Strand: POSITIVE Subject Start: 481 Subject End: 549 .......................................................................................................................................................gttcggaatgacaaagactgttatttgcgttgattcgcgcccatttgcgaaatttgcgttcggataaccc........................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................gttcggaatgacaaagggggttatttgcgtccattcgcgtc-atttgcgaaatttgcgttcggataaccc........................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 9.0E-11 bit: 69.9 Len: 59 Query Start:22 Query End:80 Subject Strand: POSITIVE Subject Start: 561 Subject End: 618 .....................taacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctctttt........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ .....................taaccattgacaattaaccattaatttgtcattcagcgcg-aagcgatgaatctctttt........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 5 e-value: 1.0E-9 bit: 65.9 Len: 69 Query Start:412 Query End:480 Subject Strand: POSITIVE Subject Start: 551 Subject End: 618 ...........................................................................................................................................................................................................................................................................................................................................................................................................................gcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctctttt........................................................................ ...........................................................................................................................................................................................................................................................................................................................................................................................................................gcataacaattaaccattgacaattaaccattaatttgtcattcagcgcg-aagcgatgaatctctttt........................................................................ Subject: tfor_TF1187_TF1188|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1269933,1270295]|363 HSP 1 e-value: 7.0E-30 bit: 133.0 Len: 87 Query Start:1 Query End:87 Subject Strand: NEGATIVE Subject Start: 67 Subject End: 153 tgattcggcgtgtaccacgcataacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. tgattcggcgtgtacccggcataacaattaaccattaaccattaatttgtcattcagagcgtaagcgatgaatctcttttccgttac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-18 bit: 95.6 Len: 60 Query Start:422 Query End:481 Subject Strand: NEGATIVE Subject Start: 73 Subject End: 132 .....................................................................................................................................................................................................................................................................................................................................................................................................................................taacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttc....................................................................... .....................................................................................................................................................................................................................................................................................................................................................................................................................................taacaattaaccattaaccattaatttgtcattcagagcgtaagcgatgaatctcttttc....................................................................... Subject: tfor_TF1588_TF1589|hypothetical protein:surface antigen BspA|POSITIVE:POSITIVE|[1702621,1703328]|708 HSP 1 e-value: 1.0E-28 bit: 129.0 Len: 123 Query Start:46 Query End:168 Subject Strand: POSITIVE Subject Start: 482 Subject End: 605 .............................................tttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgac-aagaggaagtgttcggaatgac-aagaggaggtgttcggaatgacaaaga................................................................................................................................................................................................................................................................................................................................................................................................ .............................................tttgtcattcagagcgtaagcgaagaatct-ttttccttttcctcacgagattcctcactgcgttcggaatgacaaagaggagacgttcggaatgacaaagaggaagcattcggaatgacaaaga................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 2.0E-18 bit: 95.6 Len: 99 Query Start:448 Query End:546 Subject Strand: POSITIVE Subject Start: 484 Subject End: 582 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................tgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgac-aagaggaagtgttcggaatgacaaaga...... ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................tgtcattcagagcgtaagcgaagaatctttttcctttt-cctcacgagattcctcactgcgttcggaatgacaaagaggagacgttcggaatgacaaaga...... HSP 3 e-value: 6.0E-9 bit: 63.9 Len: 75 Query Start:47 Query End:121 Subject Strand: POSITIVE Subject Start: 199 Subject End: 270 ..............................................ttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... ..............................................ttgtcattcagagcg-aagcgatgaatct--tttccttttcggggcgggattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 5.0E-6 bit: 54.0 Len: 31 Query Start:239 Query End:269 Subject Strand: POSITIVE Subject Start: 69 Subject End: 99 ..............................................................................................................................................................................................................................................gggcgaacacagaggttcgcccctacacggc........................................................................................................................................................................................................................................................................................... ..............................................................................................................................................................................................................................................gggcgaacacagaggttcgcccctacgcggc........................................................................................................................................................................................................................................................................................... HSP 5 e-value: 5.0E-6 bit: 54.0 Len: 27 Query Start:495 Query End:521 Subject Strand: POSITIVE Subject Start: 244 Subject End: 270 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gattcctcactgcgttcggaatgacaa............................... ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gattcctcactgcgttcggaatgacaa............................... Subject: tfor_TF1838_TF1839|tRNA/rRNA methyltransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1988806,1989486]|681 HSP 1 e-value: 4.0E-28 bit: 127.0 Len: 120 Query Start:402 Query End:521 Subject Strand: NEGATIVE Subject Start: 107 Subject End: 225 .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaa............................... .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtacccggcataacaattaaccattgacaattaacaattaatttgtcattcagagcgtaagcgaagaatctc-tttcttttactccgcgggattcctcacggtgttcggaatgacaa............................... HSP 2 e-value: 7.0E-27 bit: 123.0 Len: 121 Query Start:1 Query End:121 Subject Strand: NEGATIVE Subject Start: 107 Subject End: 233 tgattcggcgtgtaccacgcataacaattaac-------aattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... tgattcggcgtgtacccggcataacaattaaccattgacaattaacaattaatttgtcattcagagcgtaagcgaagaatctc-tttcttttactccgcgggattcctcacggtgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 9.0E-8 bit: 60.0 Len: 30 Query Start:192 Query End:221 Subject Strand: NEGATIVE Subject Start: 62 Subject End: 91 ...............................................................................................................................................................................................ccatttgcgaaatttgcgttcggataaccc........................................................................................................................................................................................................................................................................................................................................... ...............................................................................................................................................................................................ccatttgcgaaatttgcgttcggataaccc........................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1590_TF1591|hypothetical protein:surface antigen BspA|POSITIVE:POSITIVE|[1706104,1706526]|423 HSP 1 e-value: 4.0E-28 bit: 127.0 Len: 110 Query Start:47 Query End:156 Subject Strand: POSITIVE Subject Start: 249 Subject End: 359 ..............................................ttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgac-aagaggaagtgttcggaatgac-aagaggaggtgttcg............................................................................................................................................................................................................................................................................................................................................................................................................ ..............................................ttgtcattcagagcgtaagcgaagaatct-ttttccttttcctcacgagattcctcactgcgttcggaatgacaaagaggaagcattcggaatgacaaagaggaggcgttcg............................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 6.0E-21 bit: 103.0 Len: 99 Query Start:448 Query End:546 Subject Strand: POSITIVE Subject Start: 250 Subject End: 348 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................tgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgac-aagaggaagtgttcggaatgacaaaga...... ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................tgtcattcagagcgtaagcgaagaatctttttcctttt-cctcacgagattcctcactgcgttcggaatgacaaagaggaagcattcggaatgacaaaga...... HSP 3 e-value: 5.0E-6 bit: 54.0 Len: 31 Query Start:239 Query End:269 Subject Strand: POSITIVE Subject Start: 119 Subject End: 149 ..............................................................................................................................................................................................................................................gggcgaacacagaggttcgcccctacacggc........................................................................................................................................................................................................................................................................................... ..............................................................................................................................................................................................................................................gggcgaacacagaggttcgcccctacgcggc........................................................................................................................................................................................................................................................................................... Subject: tfor_TF1841_TF1842|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1992328,1992710]|383 HSP 1 e-value: 2.0E-27 bit: 125.0 Len: 99 Query Start:22 Query End:120 Subject Strand: NEGATIVE Subject Start: 11 Subject End: 108 .....................taacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgaca................................................................................................................................................................................................................................................................................................................................................................................................................................................ .....................taaccattgacaattaacaattactttgtcattcagagcgtaagcgaagaatctc-tttcctcttcctcgcgagattcctcactgcgttcggaatgaca................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 7.0E-24 bit: 113.0 Len: 109 Query Start:412 Query End:520 Subject Strand: NEGATIVE Subject Start: 11 Subject End: 118 ...........................................................................................................................................................................................................................................................................................................................................................................................................................gcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgaca................................ ...........................................................................................................................................................................................................................................................................................................................................................................................................................gcataaccattaaccattgacaattaacaattactttgtcattcagagcgtaagcgaagaatctctttcctctt-cctcgcgagattcctcactgcgttcggaatgaca................................ HSP 3 e-value: 3.0E-23 bit: 111.0 Len: 76 Query Start:46 Query End:121 Subject Strand: NEGATIVE Subject Start: 283 Subject End: 357 .............................................tttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................tttgtcattcagagcgtaagcgaagaatctc-tttcctcttcctcgcgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 2.0E-17 bit: 91.7 Len: 74 Query Start:448 Query End:521 Subject Strand: NEGATIVE Subject Start: 283 Subject End: 355 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................tgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaa............................... ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................tgtcattcagagcgtaagcgaagaatctctttcctctt-cctcgcgagattcctcactgcgttcggaatgacaa............................... Subject: tfor_TF2920_TF2921|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[3117231,3118637]|1407 HSP 1 e-value: 7.0E-27 bit: 123.0 Len: 90 Query Start:32 Query End:121 Subject Strand: POSITIVE Subject Start: 396 Subject End: 484 ...............................caattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... ...............................caattaaccattaatttgtcattcagagcgtaagcgaagaatctc-tttcctctttcccacgggattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 3.0E-23 bit: 111.0 Len: 76 Query Start:46 Query End:121 Subject Strand: POSITIVE Subject Start: 729 Subject End: 803 .............................................tttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................tttgtcattcagagcgtaagcgaagaatctc-ttccctttcccccgtgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 4.0E-16 bit: 87.7 Len: 88 Query Start:434 Query End:521 Subject Strand: POSITIVE Subject Start: 398 Subject End: 484 .................................................................................................................................................................................................................................................................................................................................................................................................................................................attaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaa............................... .................................................................................................................................................................................................................................................................................................................................................................................................................................................attaaccattaatttgtcattcagagcgtaagcgaagaatctctttcctctt-tcccacgggattcctcactgcgttcggaatgacaa............................... HSP 4 e-value: 6.0E-15 bit: 83.8 Len: 74 Query Start:448 Query End:521 Subject Strand: POSITIVE Subject Start: 731 Subject End: 803 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................tgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaa............................... ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................tgtcattcagagcgtaagcgaagaatctcttccctttc-ccccgtgagattcctcactgcgttcggaatgacaa............................... Subject: tfor_TF2500_TF2501|ABC transporter, ATP-binding protein:DNA mismatch repair protein|POSITIVE:POSITIVE|[2675363,2676419]|1057 HSP 1 e-value: 3.0E-26 bit: 121.0 Len: 97 Query Start:380 Query End:476 Subject Strand: NEGATIVE Subject Start: 720 Subject End: 816 ...........................................................................................................................................................................................................................................................................................................................................................................................atgtccctctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctc............................................................................ ...........................................................................................................................................................................................................................................................................................................................................................................................atgtccctctgcgttcggataccgtgtacccggcataacaattgacaattgacaattaaccattaatatgtcattcagagcgtaagcgaagaatctc............................................................................ HSP 2 e-value: 1.0E-16 bit: 89.7 Len: 53 Query Start:24 Query End:76 Subject Strand: NEGATIVE Subject Start: 720 Subject End: 772 .......................acaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ .......................acaattgacaattaaccattaatatgtcattcagagcgtaagcgaagaatctc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 3 e-value: 6.0E-15 bit: 83.8 Len: 54 Query Start:310 Query End:363 Subject Strand: NEGATIVE Subject Start: 825 Subject End: 877 .....................................................................................................................................................................................................................................................................................................................cccccctttgaaggggtaacatccccccttcgcttcgctcttcccccctttgaa............................................................................................................................................................................................. .....................................................................................................................................................................................................................................................................................................................cccccctttgaagggataacatccccc-ttcgcttcgctcttcccccctttgaa............................................................................................................................................................................................. HSP 4 e-value: 2.0E-8 bit: 61.9 Len: 43 Query Start:178 Query End:220 Subject Strand: NEGATIVE Subject Start: 340 Subject End: 381 .................................................................................................................................................................................gcgttgattcgcgcccatttgcgaaatttgcgttcggataacc............................................................................................................................................................................................................................................................................................................................................ .................................................................................................................................................................................gcgttgatttgcgcc-atttgcgaaatttgcgttcggataacc............................................................................................................................................................................................................................................................................................................................................ Subject: tfor_TF2997_TF2998|hypothetical protein:surface antigen BspA|POSITIVE:POSITIVE|[3211725,3211950]|226 HSP 1 e-value: 4.0E-25 bit: 117.0 Len: 98 Query Start:24 Query End:121 Subject Strand: POSITIVE Subject Start: 3 Subject End: 97 .......................acaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... .......................acaattaacaattaaccattaatttgtcattcagagcg-aagcgaagaatctcatt--cttttccccacgggattcctcactacgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-12 bit: 75.8 Len: 98 Query Start:424 Query End:521 Subject Strand: POSITIVE Subject Start: 3 Subject End: 97 .......................................................................................................................................................................................................................................................................................................................................................................................................................................acaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaa............................... .......................................................................................................................................................................................................................................................................................................................................................................................................................................acaattaacaattaaccattaatttgtcattcagagcg-aagcgaagaatctc-attctttt-ccccacgggattcctcactacgttcggaatgacaa............................... Subject: tfor_TF2816_TF2817|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[3007245,3007497]|253 HSP 1 e-value: 2.0E-24 bit: 115.0 Len: 121 Query Start:1 Query End:121 Subject Strand: NEGATIVE Subject Start: 108 Subject End: 234 tgattcggcgtgtaccacgcataacaattaac-------aattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... tgattcggcgtgtaccacgcataataattgaccattgacaattaacaattaatttgtcattcagagca-aagcgaagaatctcctttccttttcctcgcgggattcctcactgtgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-21 bit: 103.0 Len: 120 Query Start:402 Query End:521 Subject Strand: NEGATIVE Subject Start: 108 Subject End: 226 .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaa............................... .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataataattgaccattgacaattaacaattaatttgtcattcagagc-aaagcgaagaatctcctttccttttcctcgcgggattcctcactgtgttcggaatgacaa............................... HSP 3 e-value: 6.0E-9 bit: 63.9 Len: 76 Query Start:150 Query End:225 Subject Strand: NEGATIVE Subject Start: 49 Subject End: 123 .....................................................................................................................................................gtgttcggaatgacaaagactgttatttgcgttgattcgcgcccatttgcgaaatttgcgttcggataaccctgca....................................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................gtgttcggaatgacaaagggggttatttgctttcattcgcgtt-atttgcgttatttgcgttcggataaccctgca....................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 1.0E-6 bit: 56.0 Len: 32 Query Start:412 Query End:443 Subject Strand: NEGATIVE Subject Start: 20 Subject End: 51 ...........................................................................................................................................................................................................................................................................................................................................................................................................................gcataacaattaacaattaaccattaacaatt............................................................................................................. ...........................................................................................................................................................................................................................................................................................................................................................................................................................gcataacaattaacaattgaccattaacaatt............................................................................................................. Subject: tfor_TF1483_TF1484|glycosyltransferase family protein:penicillin binding protein|POSITIVE:POSITIVE|[1578886,1579698]|813 HSP 1 e-value: 4.0E-22 bit: 107.0 Len: 142 Query Start:380 Query End:521 Subject Strand: NEGATIVE Subject Start: 225 Subject End: 365 ...........................................................................................................................................................................................................................................................................................................................................................................................atgtccctctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaa............................... ...........................................................................................................................................................................................................................................................................................................................................................................................atgttcctctgcggtcggataccatgtacccggcataacaattaacaattgacaattaaccattaatttgtcattcagagcg-aagcgaagaatctcttccctttaccggggcgggattcctcactacgttcggaatgacaa............................... HSP 2 e-value: 2.0E-21 bit: 105.0 Len: 100 Query Start:22 Query End:121 Subject Strand: NEGATIVE Subject Start: 225 Subject End: 323 .....................taacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttacc-ccgcgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... .....................taacaattgacaattaaccattaatttgtcattcagagcg-aagcgaagaatctc-ttccctttaccggggcgggattcctcactacgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 1.0E-19 bit: 99.6 Len: 54 Query Start:310 Query End:363 Subject Strand: NEGATIVE Subject Start: 85 Subject End: 138 .....................................................................................................................................................................................................................................................................................................................cccccctttgaaggggtaacatccccccttcgcttcgctcttcccccctttgaa............................................................................................................................................................................................. .....................................................................................................................................................................................................................................................................................................................cccccctttgaagggataacatccccccttcgcttcgctcttcccccctttgaa............................................................................................................................................................................................. HSP 4 e-value: 9.0E-11 bit: 69.9 Len: 67 Query Start:380 Query End:446 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 67 ...........................................................................................................................................................................................................................................................................................................................................................................................atgtccctctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaat.......................................................................................................... ...........................................................................................................................................................................................................................................................................................................................................................................................atgttcctctgcggtcggataccatgtacccggcataacaattaacaattgacaattaaccattaat.......................................................................................................... Subject: tfor_TF0603_TF0604|glycosyltransferase:hypothetical protein|POSITIVE:POSITIVE|[634899,635524]|626 HSP 1 e-value: 2.0E-21 bit: 105.0 Len: 93 Query Start:29 Query End:121 Subject Strand: NEGATIVE Subject Start: 145 Subject End: 235 ............................taacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................taacaattaacaattaatttgtcattcagagcg-aagcgaagaatctctttt-cttccccccgcgggattcctcacggtgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 3.0E-20 bit: 101.0 Len: 67 Query Start:387 Query End:453 Subject Strand: NEGATIVE Subject Start: 50 Subject End: 116 ..................................................................................................................................................................................................................................................................................................................................................................................................tctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcat................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................tctgcgttcggataccgtgtaccacgcataacaattgacaattgaccattaacaattaatttgtcat................................................................................................... HSP 3 e-value: 4.0E-19 bit: 97.6 Len: 73 Query Start:285 Query End:357 Subject Strand: NEGATIVE Subject Start: 295 Subject End: 366 ............................................................................................................................................................................................................................................................................................tgctgacggcttaccgcactgcattcccccctttgaaggggtaacatccccccttcgcttcgctcttcccccc................................................................................................................................................................................................... ............................................................................................................................................................................................................................................................................................tgctgacggctgaccgcactgcattccccc-tttgaagggataacatcccccctttgcttcgctctttccccc................................................................................................................................................................................................... HSP 4 e-value: 2.0E-14 bit: 81.8 Len: 93 Query Start:429 Query End:521 Subject Strand: NEGATIVE Subject Start: 145 Subject End: 235 ............................................................................................................................................................................................................................................................................................................................................................................................................................................taaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaa............................... ............................................................................................................................................................................................................................................................................................................................................................................................................................................taacaattaacaattaatttgtcattcagagcg-aagcgaagaatctcttttc-ttccccccgcgggattcctcacggtgttcggaatgacaa............................... HSP 5 e-value: 9.0E-14 bit: 79.8 Len: 52 Query Start:380 Query End:431 Subject Strand: NEGATIVE Subject Start: 219 Subject End: 270 ...........................................................................................................................................................................................................................................................................................................................................................................................atgtccctctgcgctcggataccgtgtaccacgcataacaattaacaattaa......................................................................................................................... ...........................................................................................................................................................................................................................................................................................................................................................................................atgttcctctgcgttcggataccgtgtaccatgcataacaattaacaattaa......................................................................................................................... HSP 6 e-value: 3.0E-7 bit: 58.0 Len: 37 Query Start:9 Query End:45 Subject Strand: NEGATIVE Subject Start: 65 Subject End: 101 ........cgtgtaccacgcataacaattaacaattaaccattaa........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ........cgtgtaccacgcataacaattgacaattgaccattaa........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF0541_TF0542|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[571919,572057]|139 HSP 1 e-value: 6.0E-21 bit: 103.0 Len: 92 Query Start:30 Query End:121 Subject Strand: NEGATIVE Subject Start: 50 Subject End: 139 .............................aacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................aacaattaaccattaatttgtcattcagggcg-aagcgaagaatctcctt-ctttttcctcgcgagattcctcactacgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-11 bit: 71.9 Len: 88 Query Start:434 Query End:521 Subject Strand: NEGATIVE Subject Start: 50 Subject End: 135 .................................................................................................................................................................................................................................................................................................................................................................................................................................................attaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaa............................... .................................................................................................................................................................................................................................................................................................................................................................................................................................................attaaccattaatttgtcattcagggcga-agcgaagaatctcctt-ctttttcctcgcgagattcctcactacgttcggaatgacaa............................... Subject: tfor_TF2817_TF2818|hypothetical protein:acetylornithine aminotransferase|POSITIVE:POSITIVE|[3007687,3007878]|192 HSP 1 e-value: 2.0E-18 bit: 95.6 Len: 100 Query Start:380 Query End:479 Subject Strand: NEGATIVE Subject Start: 7 Subject End: 105 ...........................................................................................................................................................................................................................................................................................................................................................................................atgtccctctgcgctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttt......................................................................... ...........................................................................................................................................................................................................................................................................................................................................................................................atgttcctctgcgttcggataccgtgtacccggcataacaattaaccattgacaattaaccattaatttgtcattcagagcg-aagcgaagaatctcttt......................................................................... HSP 2 e-value: 6.0E-15 bit: 83.8 Len: 58 Query Start:22 Query End:79 Subject Strand: NEGATIVE Subject Start: 7 Subject End: 63 .....................taacaattaacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttt......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .....................taaccattgacaattaaccattaatttgtcattcagagcg-aagcgaagaatctcttt......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 6.0E-12 bit: 73.8 Len: 57 Query Start:307 Query End:363 Subject Strand: NEGATIVE Subject Start: 115 Subject End: 170 ..................................................................................................................................................................................................................................................................................................................attcccccctttgaaggggtaacatccccccttcgcttcgctcttcccccctttgaa............................................................................................................................................................................................. ..................................................................................................................................................................................................................................................................................................................attcccccctttgaagggataacat-ccctcttcgctccgctcttcccccctttgaa............................................................................................................................................................................................. Subject: tfor_TF2996_TF2997|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[3211182,3211547]|366 HSP 1 e-value: 2.0E-15 bit: 85.7 Len: 59 Query Start:402 Query End:460 Subject Strand: POSITIVE Subject Start: 228 Subject End: 286 .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtcattcagagc............................................................................................ .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaaccattgacaattaacaattaatttgtcattcagagc............................................................................................ HSP 2 e-value: 2.0E-14 bit: 81.8 Len: 78 Query Start:193 Query End:270 Subject Strand: POSITIVE Subject Start: 42 Subject End: 118 ................................................................................................................................................................................................catttgcgaaatttgcgttcggataaccctgcaccacacnnnnnnngggcgaacacagaggttcgcccctacacggca.......................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................catttgcgaaatttgcgttcggataacccggcatcacacaaaaaaagggcgaacaca-aggttcgcccctacacggca.......................................................................................................................................................................................................................................................................................... HSP 3 e-value: 6.0E-12 bit: 73.8 Len: 60 Query Start:1 Query End:60 Subject Strand: POSITIVE Subject Start: 220 Subject End: 286 tgattcggcgtgtaccacgcataacaatta-------acaattaaccattaatttgtcattcagagc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ tgattcggcgtgtaccacgcataacaattaaccattgacaattaacaattaatttgtcattcagagc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 4 e-value: 3.0E-7 bit: 58.0 Len: 45 Query Start:1 Query End:45 Subject Strand: POSITIVE Subject Start: 163 Subject End: 207 tgattcggcgtgtaccacgcataacaattaacaattaaccattaa........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... tgattcggcgtgtaccacgcataaccattgacaattgacaattaa........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 5 e-value: 3.0E-7 bit: 58.0 Len: 45 Query Start:402 Query End:446 Subject Strand: POSITIVE Subject Start: 171 Subject End: 215 .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaacaattaaccattaacaattaat.......................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataaccattgacaattgacaattaacaattaat.......................................................................................................... Subject: tfor_TF1592_TF1593|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1708618,1708998]|381 HSP 1 e-value: 6.0E-15 bit: 83.8 Len: 74 Query Start:48 Query End:121 Subject Strand: POSITIVE Subject Start: 224 Subject End: 295 ...............................................tgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... ...............................................tgtcattcagagcg-aagcgaagaatct-ttttccttctcctcacgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 9.0E-8 bit: 60.0 Len: 30 Query Start:492 Query End:521 Subject Strand: POSITIVE Subject Start: 266 Subject End: 295 ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cgagattcctcactgcgttcggaatgacaa............................... ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cgagattcctcactgcgttcggaatgacaa............................... HSP 3 e-value: 5.0E-6 bit: 54.0 Len: 31 Query Start:239 Query End:269 Subject Strand: POSITIVE Subject Start: 93 Subject End: 123 ..............................................................................................................................................................................................................................................gggcgaacacagaggttcgcccctacacggc........................................................................................................................................................................................................................................................................................... ..............................................................................................................................................................................................................................................gggcgaacacagaggttcgcccctacgcggc........................................................................................................................................................................................................................................................................................... Subject: tfor_TF2744_TF2745|methionyl-tRNA formyltransferase:hypothetical protein|POSITIVE:POSITIVE|[2927439,2927701]|263 HSP 1 e-value: 4.0E-13 bit: 77.8 Len: 87 Query Start:35 Query End:121 Subject Strand: NEGATIVE Subject Start: 178 Subject End: 263 ..................................ttaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttaccccgcgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................ttaaccattaatttgtcattcagagcg-aagcgatgaatctctctccttttccggggcgagattcctcacggtgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 9.0E-11 bit: 69.9 Len: 87 Query Start:435 Query End:521 Subject Strand: NEGATIVE Subject Start: 178 Subject End: 263 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................ttaacaattaatatgtcattcagagcgtgagcgatgaatctcttttcttttaccccgcgagattcctcactgcgttcggaatgacaa............................... ..................................................................................................................................................................................................................................................................................................................................................................................................................................................ttaaccattaatttgtcattcagagcga-agcgatgaatctctctccttttccggggcgagattcctcacggtgttcggaatgacaa............................... Subject: tfor_TF0469_TF0470|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[487289,487392]|104 HSP 1 e-value: 4.0E-13 bit: 77.8 Len: 43 Query Start:1 Query End:43 Subject Strand: POSITIVE Subject Start: 34 Subject End: 76 tgattcggcgtgtaccacgcataacaattaacaattaaccatt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. tgattcggcgtgtaccacgcataacaattgacaattaaccatt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-11 bit: 71.9 Len: 44 Query Start:402 Query End:445 Subject Strand: POSITIVE Subject Start: 42 Subject End: 85 .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaacaattaaccattaacaattaa........................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattgacaattaaccattgacaattaa........................................................................................................... Subject: tfor_TF2438_TF2439|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[2616218,2616519]|302 HSP 1 e-value: 1.0E-12 bit: 75.8 Len: 38 Query Start:1 Query End:38 Subject Strand: POSITIVE Subject Start: 74 Subject End: 111 tgattcggcgtgtaccacgcataacaattaacaattaa.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. tgattcggcgtgtaccacgcataacaattaacaattaa.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 9.0E-8 bit: 60.0 Len: 30 Query Start:402 Query End:431 Subject Strand: POSITIVE Subject Start: 82 Subject End: 111 .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaacaattaa......................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaacaattaa......................................................................................................................... Subject: tfor_TF0467_TF0468|acetyltransferase-related protein:hypothetical protein|POSITIVE:POSITIVE|[486604,487068]|465 HSP 1 e-value: 6.0E-12 bit: 73.8 Len: 37 Query Start:1 Query End:37 Subject Strand: POSITIVE Subject Start: 417 Subject End: 453 tgattcggcgtgtaccacgcataacaattaacaatta................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... tgattcggcgtgtaccacgcataacaattaacaatta................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 3.0E-7 bit: 58.0 Len: 29 Query Start:402 Query End:430 Subject Strand: POSITIVE Subject Start: 425 Subject End: 453 .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaacaatta.......................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaacaatta.......................................................................................................................... Subject: tfor_TF2665_TF2667|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2842296,2842534]|239 HSP 1 e-value: 9.0E-11 bit: 69.9 Len: 51 Query Start:402 Query End:452 Subject Strand: POSITIVE Subject Start: 189 Subject End: 239 .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaacaattaaccattaacaattaatatgtca.................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaaccattgacaattaacaattaatttgtca.................................................................................................... HSP 2 e-value: 1.0E-9 bit: 65.9 Len: 45 Query Start:1 Query End:45 Subject Strand: POSITIVE Subject Start: 181 Subject End: 225 tgattcggcgtgtaccacgcataacaattaacaattaaccattaa........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... tgattcggcgtgtaccacgcataacaattaaccattgacaattaa........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1846_TF1847|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1997076,1997528]|453 HSP 1 e-value: 9.0E-11 bit: 69.9 Len: 43 Query Start:1 Query End:43 Subject Strand: NEGATIVE Subject Start: 87 Subject End: 129 tgattcggcgtgtaccacgcataacaattaacaattaaccatt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. tgattcggcgtgtaccacgcataaccattaaccattaaccatt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 4.0E-10 bit: 67.9 Len: 46 Query Start:311 Query End:356 Subject Strand: NEGATIVE Subject Start: 231 Subject End: 275 ......................................................................................................................................................................................................................................................................................................................ccccctttgaaggggtaacatccccccttcgcttcgctcttccccc.................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................cccccttggaaggggtaacatccccc-ttcgcttcgctcttccccc.................................................................................................................................................................................................... HSP 3 e-value: 6.0E-9 bit: 63.9 Len: 44 Query Start:402 Query End:445 Subject Strand: NEGATIVE Subject Start: 78 Subject End: 121 .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaacaattaaccattaacaattaa........................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataaccattaaccattaaccattgacaattaa........................................................................................................... HSP 4 e-value: 2.0E-8 bit: 61.9 Len: 39 Query Start:22 Query End:60 Subject Strand: NEGATIVE Subject Start: 56 Subject End: 94 .....................taacaattaacaattaaccattaatttgtcattcagagc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ .....................taaccattgacaattaaccattaatttgtcattcagagc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: tfor_TF1659_TF1660|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1775270,1775408]|139 HSP 1 e-value: 9.0E-11 bit: 69.9 Len: 59 Query Start:29 Query End:87 Subject Strand: NEGATIVE Subject Start: 67 Subject End: 124 ............................taacaattaaccattaatttgtcattcagagcgtaagcgaagaatctcttttcctttac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ............................taaccattaaccattaatttatcattcagagcg-aagcgatgaatctcttttccgttac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 3.0E-7 bit: 58.0 Len: 53 Query Start:429 Query End:481 Subject Strand: NEGATIVE Subject Start: 73 Subject End: 124 ............................................................................................................................................................................................................................................................................................................................................................................................................................................taaccattaacaattaatatgtcattcagagcgtgagcgatgaatctcttttc....................................................................... ............................................................................................................................................................................................................................................................................................................................................................................................................................................taaccattaaccattaatttatcattcagagcg-aagcgatgaatctcttttc....................................................................... Subject: tfor_TF0684_TF0685|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[730625,730991]|367 HSP 1 e-value: 4.0E-10 bit: 67.9 Len: 54 Query Start:392 Query End:445 Subject Strand: POSITIVE Subject Start: 286 Subject End: 339 .......................................................................................................................................................................................................................................................................................................................................................................................................gctcggataccgtgtaccacgcataacaattaacaattaaccattaacaattaa........................................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................................................gctcggataccgtgtacccgacataacaattgacaattaaccattgacaattaa........................................................................................................... HSP 2 e-value: 6.0E-9 bit: 63.9 Len: 40 Query Start:22 Query End:61 Subject Strand: POSITIVE Subject Start: 323 Subject End: 362 .....................taacaattaacaattaaccattaatttgtcattcagagcg........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .....................taaccattgacaattaaccattaatttgtcattcagagcg........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2993_TF2994|SAM-dependent methyltransferase:hypothetical protein|POSITIVE:POSITIVE|[3210478,3210744]|267 HSP 1 e-value: 1.0E-9 bit: 65.9 Len: 45 Query Start:1 Query End:45 Subject Strand: POSITIVE Subject Start: 215 Subject End: 259 tgattcggcgtgtaccacgcataacaattaacaattaaccattaa........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... tgattcggcgtgtaccacgcataacaattaaccattgacaattaa........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-9 bit: 65.9 Len: 45 Query Start:402 Query End:446 Subject Strand: POSITIVE Subject Start: 223 Subject End: 267 .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaacaattaaccattaacaattaat.......................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaaccattgacaattaacaattaat.......................................................................................................... Subject: tfor_TF1585_TF1586|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1690671,1691110]|440 HSP 1 e-value: 6.0E-9 bit: 63.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 134 Subject End: 177 tgattcggcgtgtaccacgcataacaattaacaattaaccatta............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ tgattcgacgtgtaccacgcataacaattgaccattaaccatta............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 1.0E-6 bit: 56.0 Len: 36 Query Start:402 Query End:437 Subject Strand: POSITIVE Subject Start: 142 Subject End: 177 .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattaacaattaaccatta................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................cgtgtaccacgcataacaattgaccattaaccatta................................................................................................................... Subject: tfor_TF0538_TF0540|hypothetical protein:conserved hypothetical protein; possible surface protein|POSITIVE:POSITIVE|[567196,567425]|230 HSP 1 e-value: 6.0E-9 bit: 63.9 Len: 36 Query Start:46 Query End:81 Subject Strand: NEGATIVE Subject Start: 57 Subject End: 92 .............................................tttgtcattcagagcgtaagcgaagaatctcttttc....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................tttgtcattcagagcgtaagcgaagaatctcctttc....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 5.0E-6 bit: 54.0 Len: 31 Query Start:333 Query End:363 Subject Strand: NEGATIVE Subject Start: 129 Subject End: 159 ............................................................................................................................................................................................................................................................................................................................................cccccttcgcttcgctcttcccccctttgaa............................................................................................................................................................................................. ............................................................................................................................................................................................................................................................................................................................................cccccttcgcttcgcttttcccccctttgaa............................................................................................................................................................................................. Subject: tfor_TF2913_TF2914|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[3109178,3109484]|307 HSP 1 e-value: 9.0E-8 bit: 60.0 Len: 30 Query Start:93 Query End:122 Subject Strand: POSITIVE Subject Start: 51 Subject End: 80 ............................................................................................gagattcctcactgcgttcggaatgacaag.............................................................................................................................................................................................................................................................................................................................................................................................................................................. ............................................................................................gagattcctcactgcgttcggaatgacaag.............................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 9.0E-8 bit: 60.0 Len: 30 Query Start:493 Query End:522 Subject Strand: POSITIVE Subject Start: 51 Subject End: 80 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcctcactgcgttcggaatgacaag.............................. ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagattcctcactgcgttcggaatgacaag.............................. Subject: tfor_TF2815_TF2816|meso-diaminopimelate D-dehydrogenase:hypothetical protein|POSITIVE:POSITIVE|[3006481,3007064]|584 HSP 1 e-value: 9.0E-8 bit: 60.0 Len: 42 Query Start:184 Query End:225 Subject Strand: NEGATIVE Subject Start: 518 Subject End: 559 .......................................................................................................................................................................................attcgcgcccatttgcgaaatttgcgttcggataaccctgca....................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................attcgcgtccatttgcgagattcgcgttcggataaccctgca....................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-6 bit: 56.0 Len: 32 Query Start:412 Query End:443 Subject Strand: NEGATIVE Subject Start: 489 Subject End: 520 ...........................................................................................................................................................................................................................................................................................................................................................................................................................gcataacaattaacaattaaccattaacaatt............................................................................................................. ...........................................................................................................................................................................................................................................................................................................................................................................................................................gcataacaattaacaattgaccattaacaatt............................................................................................................. Subject: tfor_TF2640_TF2641|hypothetical protein:riboflavin kinase/FAD synthase|POSITIVE:POSITIVE|[2809594,2809820]|227 HSP 1 e-value: 5.0E-6 bit: 54.0 Len: 31 Query Start:91 Query End:121 Subject Strand: POSITIVE Subject Start: 40 Subject End: 70 ..........................................................................................gcgagattcctcactgcgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... ..........................................................................................gcgagattcctcactacgttcggaatgacaa............................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 5.0E-6 bit: 54.0 Len: 31 Query Start:491 Query End:521 Subject Strand: POSITIVE Subject Start: 40 Subject End: 70 ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gcgagattcctcactgcgttcggaatgacaa............................... ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gcgagattcctcactacgttcggaatgacaa............................... Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UGAUUCGGCGUGUACCACGCAUAACAAUUAACAAUUAACCAUUAAUUUGUCAUUCAGAGCGUAAGCGAAGAAUCUCUUUUCCUUUACCCCGCGAGAUUCCUCACUGCGUUCGGAAUGACAAGAGGAAGUGUUCGGAAUGACAAGAGGAGGUGUUCGGAAUGACAAAGACUGUUAUUUGCGUUGAUUCGCGCCCAUUUGCGAAAUUUGCGUUCGGAUAACCCUGCACCACACAAAAAAAGGGCGAACACAGAGGUUCGCCCCUACACGGCACACCGAACGCUGUUUGCUGACGGCUUACCGCACUGCAUUCCCCCCUUUGAAGGGGUAACAUCCCCCCUUCGCUUCGCUCUUCCCCCCUUUGAAGGGGGGGGAGGGGGGGAUGUCCCUCUGCGCUCGGAUACCGUGUACCACGCAUAACAAUUAACAAUUAACCAUUAACAAUUAAUAUGUCAUUCAGAGCGUGAGCGAUGAAUCUCUUUUCUUUUACCCCGCGAGAUUCCUCACUGCGUUCGGAAUGACAAGAGGAAGUGUUCGGAAUGACAAAGACUGUUA .......(((((...)))))...............((((......((((((((((.(((((((((.(((((.....))))).))))).........((((((....(((((.(((((....((((((.....(((..(((.((((((((..((((.((((((((..((.(((((..((.(((((((((((......)))))....(((((..((........................((((((((......)))))))).(((((((....((((..((((((....))))))....((((..(((((((((((((.(((((((........)))))))...........(((((((....))))))).))))))))))))).....)))).))))...))))))))))))))............)))))))).))))).))....))))))))...((....))...))))..)))))))))))..))).....))))))....))))).)))))....))))))..)))).))))))))))....)))) (-198.20) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAACAGUCUUUGUCAUUCCGAACACUUCCUCUUGUCAUUCCGAACGCAGUGAGGAAUCUCGCGGGGUAAAAGAAAAGAGAUUCAUCGCUCACGCUCUGAAUGACAUAUUAAUUGUUAAUGGUUAAUUGUUAAUUGUUAUGCGUGGUACACGGUAUCCGAGCGCAGAGGGACAUCCCCCCCUCCCCCCCCUUCAAAGGGGGGAAGAGCGAAGCGAAGGGGGGAUGUUACCCCUUCAAAGGGGGGAAUGCAGUGCGGUAAGCCGUCAGCAAACAGCGUUCGGUGUGCCGUGUAGGGGCGAACCUCUGUGUUCGCCCUUUUUUUGUGUGGUGCAGGGUUAUCCGAACGCAAAUUUCGCAAAUGGGCGCGAAUCAACGCAAAUAACAGUCUUUGUCAUUCCGAACACCUCCUCUUGUCAUUCCGAACACUUCCUCUUGUCAUUCCGAACGCAGUGAGGAAUCUCGCGGGGUAAAGGAAAAGAGAUUCUUCGCUUACGCUCUGAAUGACAAAUUAAUGGUUAAUUGUUAAUUGUUAUGCGUGGUACACGCCGAAUCA ....(((.((((......)))).))).....(((((((((.((.((.(((((((((((((..(((((.........(((........)))....((.((((((((.(((((((......))))))).....((((((((((((..((((((((((((((((((.....((((((((((((((.(((((((....)))))))..))).........))))))))))).(((((.....)))))...(((...((((....))))..)))....)))))))).)))))))))).((((((((......))))))))....(((((((......((.....))..))))))).(((((........)))))...)))))..)))))))...)))))))).))..))))).((((...((((((.....((((((((((..........)))).)))))).....))))))..))))...)))))))))))))..)).)).)))))))))..(((..((((.....))))..))).(((((...)))))....... (-202.30) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1098 380 331 51 1 tfor:TF1842|5end_hypothetical_protein_1992571..1992801_POSITIVE 1016 378 333 208 163 tfor:TF0540|5end_conserved_hypothetical_protein;_possible_surface_protein_567286..567516_POSITIVE 1015 400 351 168 118 tfor:TF3107|5end_hypothetical_protein_3338459..3338689_POSITIVE 1015 400 351 64 14 tfor:TF3106|5end_hypothetical_protein_3338355..3338585_POSITIVE 1008 390 341 54 5 tfor:TF2745|5end_hypothetical_protein_2927562..2927792_POSITIVE 962 369 321 175 128 tfor:TF2818|5end_acetylornithine_aminotransferase_3007739..3007969_POSITIVE 927 220 171 96 47 tfor:TF1184|5end_hypothetical_protein_1269004..1269234_POSITIVE 910 410 362 74 27 tfor:TF2746|5end_hypothetical_protein_2927996..2928226_POSITIVE 846 220 171 130 81 tfor:TF1187|5end_hypothetical_protein_1269625..1269855_POSITIVE 846 220 171 73 24 tfor:TF1186|5end_hypothetical_protein_1269568..1269798_POSITIVE 833 357 312 226 179 tfor:TF0830|5end_hypothetical_protein_887610..887840_POSITIVE 826 420 374 84 36 tfor:TF0828|5end_hypothetical_protein_887090..887320_POSITIVE 811 366 321 231 187 tfor:TF2653|5end_hypothetical_protein_2822093..2822323_POSITIVE 803 500 451 156 108 tfor:TF1841|5end_hypothetical_protein_1991936..1992166_POSITIVE 791 390 341 207 159 tfor:TF1840|5end_transposase_1990221..1990451_POSITIVE 731 520 471 180 132 tfor:TF0542|5end_hypothetical_protein_571918..572148_POSITIVE 724 79 31 67 20 tfor:TF2816|5end_hypothetical_protein_3006925..3007155_POSITIVE 717 220 171 129 81 tfor:TF3105|5end_hypothetical_protein_3338068..3338298_POSITIVE 704 140 91 62 15 tfor:TF1844|5end_hypothetical_protein_1996389..1996619_POSITIVE 704 120 76 46 1 tfor:TF1660|5end_hypothetical_protein_1775269..1775499_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1070 380 333 112 65 tfor:TF0370|3end_hypothetical_protein_386317..386467_POSITIVE 1035 369 321 82 35 tfor:TF0821|3end_hypothetical_protein_880195..880345_POSITIVE 1022 380 331 70 17 tfor:TF0828|3end_hypothetical_protein_887508..887658_POSITIVE 997 360 311 151 103 tfor:TF1182|3end_hypothetical_protein_1268938..1269088_POSITIVE 961 409 361 53 4 tfor:TF1483|3end_glycosyltransferase_family_protein_1578825..1578975_POSITIVE 915 380 333 84 38 tfor:TF2651|3end_hypothetical_protein_2822014..2822164_POSITIVE 846 359 311 151 103 tfor:TF1660|3end_hypothetical_protein_1775600..1775750_POSITIVE 816 120 75 73 28 tfor:TF0369|3end_hypothetical_protein_386186..386336_POSITIVE 809 520 471 80 32 tfor:TF1841|3end_hypothetical_protein_1992267..1992417_POSITIVE 769 220 171 62 14 tfor:TF2823|3end_TPR-containing_protein_3014337..3014487_POSITIVE 724 79 31 84 37 tfor:TF2817|3end_hypothetical_protein_3007626..3007776_POSITIVE 671 530 481 51 1 tfor:TF0541|3end_conserved_hypothetical_protein_571858..572008_POSITIVE 654 377 332 147 92 tfor:TF2816|3end_hypothetical_protein_3007184..3007334_POSITIVE 624 366 321 143 94 tfor:TF1842|3end_hypothetical_protein_1992800..1992950_POSITIVE 623 300 251 65 4 tfor:TF1165|3end_conserved_hypothetical_protein_1245921..1246071_POSITIVE 622 260 211 60 19 tfor:TF1838|3end_tRNA/rRNA_methyltransferase_1988745..1988895_POSITIVE 602 364 333 151 120 tfor:TF0539|3end_hypothetical_protein_567323..567473_POSITIVE 594 80 37 43 1 tfor:TF1184|3end_hypothetical_protein_1269311..1269461_POSITIVE 594 80 37 43 1 tfor:TF1183|3end_hypothetical_protein_1268728..1268878_POSITIVE 594 487 448 40 1 tfor:TF0538|3end_hypothetical_protein_567135..567285_POSITIVE