Origin IGS:
taataatcgcttccgttacagcgggggcataaaacagaaaaagtatgttgttcttttggtggaaaaagtacgagggcgcgtggtgggcgtcacaaatatcatttgtaggcacattattcataacggttacagcaataatgctgggagctttagtaaagcttcacttttcctctgtgcctgaatgggtcatcattgttatagtggcagtaattttcagcatattgaaatatctgttgaataggctaacagacagaatagcgaaccgaactattgaaaaggaagcgaatgaacaaaaacgctgggctactactgccaatgttactttgcagacaccctcctcattgacaataattcgcgactcaagtcctgtagcggcgcttgtacctacaattatatatcttaataacacagaggttgcatcaataaaaaacggagagtccgtaaccatacctataaagatgagaaacaacctgctacagacaaatgcagtcgttggacttaacggccgattggaaagatatgaatttgccgtacaggacggtgcacgtggcacaattcatgtgaagggcggtatttttgataaaaagaacgtcgtgtggcattagagaaatgtagtattaacacacctcagatagtgggggcataaaatagaaggaagaaatt
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9
aatttcttccttctattttatgcccccactatctgaggtgtgttaatactacatttctctaatgccacacgacgttctttttatcaaaaataccgcccttcacatgaattgtgccacgtgcaccgtcctgtacggcaaattcatatctttccaatcggccgttaagtccaacgactgcatttgtctgtagcaggttgtttctcatctttataggtatggttacggactctccgttttttattgatgcaacctctgtgttattaagatatataattgtaggtacaagcgccgctacaggacttgagtcgcgaattattgtcaatgaggagggtgtctgcaaagtaacattggcagtagtagcccagcgtttttgttcattcgcttccttttcaatagttcggttcgctattctgtctgttagcctattcaacagatatttcaatatgctgaaaattactgccactataacaatgatgacccattcaggcacagaggaaaagtgaagctttactaaagctcccagcattattgctgtaaccgttatgaataatgtgcctacaaatgatatttgtgacgcccaccacgcgccctcgtactttttccaccaaaagaacaacatactttttctgttttatgcccccgctgtaacggaagcgattatta

Mask Tandem Repeat Region ================================================
taataatcgcttccgttacagcgggggcataaaacagaaaaagtatgttgttcttttggtggaaaaagtacgagggcgcgtggtgggcgtcacaaatatcatttgtaggcacattattcataacggttacagcaataatgctgggagctttagtaaagcttcacttttcctctgtgcctgaatgggtcatcattgttatagtggcagtaattttcagcatattgaaatatctgttgaataggctaacagacagaatagcgaaccgaactattgaaaaggaagcgaatgaacaaaaacgctgggctactactgccaatgttactttgcagacaccctcctcattgacaataattcgcgactcaagtcctgtagcggcgcttgtacctacaattatatatcttaataacacagaggttgcatcaataaaaaacggagagtccgtaaccatacctataaagatgagaaacaacctgctacagacaaatgcagtcgttggacttaacggccgattggaaagatatgaatttgccgtacaggacggtgcacgtggcacaattcatgtgaagggcggtatttttgataaaaagaacgtcgtgtggcattagagaaatgtagtattaacacacctcagatagtgggggcataaaatagaaggaagaaatt

Find is-nt database================================================
Query_seq: TF1297:TF1298|TF1297:TF1298:hypothetical protein:possible membrane protein:->->:1379584..1380246 663
taataatcgcttccgttacagcgggggcataaaacagaaaaagtatgttgttcttttggtggaaaaagtacgagggcgcgtggtgggcgtcacaaatatcatttgtaggcacattattcataacggttacagcaataatgctgggagctttagtaaagcttcacttttcctctgtgcctgaatgggtcatcattgttatagtggcagtaattttcagcatattgaaatatctgttgaataggctaacagacagaatagcgaaccgaactattgaaaaggaagcgaatgaacaaaaacgctgggctactactgccaatgttactttgcagacaccctcctcattgacaataattcgcgactcaagtcctgtagcggcgcttgtacctacaattatatatcttaataacacagaggttgcatcaataaaaaacggagagtccgtaaccatacctataaagatgagaaacaacctgctacagacaaatgcagtcgttggacttaacggccgattggaaagatatgaatttgccgtacaggacggtgcacgtggcacaattcatgtgaagggcggtatttttgataaaaagaacgtcgtgtggcattagagaaatgtagtattaacacacctcagatagtgggggcataaaatagaaggaagaaatt
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find is-aa database================================================
Query_seq: TF1297:TF1298|TF1297:TF1298:hypothetical protein:possible membrane protein:->->:1379584..1380246 663
taataatcgcttccgttacagcgggggcataaaacagaaaaagtatgttgttcttttggtggaaaaagtacgagggcgcgtggtgggcgtcacaaatatcatttgtaggcacattattcataacggttacagcaataatgctgggagctttagtaaagcttcacttttcctctgtgcctgaatgggtcatcattgttatagtggcagtaattttcagcatattgaaatatctgttgaataggctaacagacagaatagcgaaccgaactattgaaaaggaagcgaatgaacaaaaacgctgggctactactgccaatgttactttgcagacaccctcctcattgacaataattcgcgactcaagtcctgtagcggcgcttgtacctacaattatatatcttaataacacagaggttgcatcaataaaaaacggagagtccgtaaccatacctataaagatgagaaacaacctgctacagacaaatgcagtcgttggacttaacggccgattggaaagatatgaatttgccgtacaggacggtgcacgtggcacaattcatgtgaagggcggtatttttgataaaaagaacgtcgtgtggcattagagaaatgtagtattaacacacctcagatagtgggggcataaaatagaaggaagaaatt
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find nr database================================================
Query_seq: TF1297:TF1298|TF1297:TF1298:hypothetical protein:possible membrane protein:->->:1379584..1380246 663
taataatcgcttccgttacagcgggggcataaaacagaaaaagtatgttgttcttttggtggaaaaagtacgagggcgcgtggtgggcgtcacaaatatcatttgtaggcacattattcataacggttacagcaataatgctgggagctttagtaaagcttcacttttcctctgtgcctgaatgggtcatcattgttatagtggcagtaattttcagcatattgaaatatctgttgaataggctaacagacagaatagcgaaccgaactattgaaaaggaagcgaatgaacaaaaacgctgggctactactgccaatgttactttgcagacaccctcctcattgacaataattcgcgactcaagtcctgtagcggcgcttgtacctacaattatatatcttaataacacagaggttgcatcaataaaaaacggagagtccgtaaccatacctataaagatgagaaacaacctgctacagacaaatgcagtcgttggacttaacggccgattggaaagatatgaatttgccgtacaggacggtgcacgtggcacaattcatgtgaagggcggtatttttgataaaaagaacgtcgtgtggcattagagaaatgtagtattaacacacctcagatagtgggggcataaaatagaaggaagaaatt
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

taataatcgcttccgttacagcgggggcataaaacagaaaaagtatgttgttcttttggtggaaaaagtacgagggcgcgtggtgggcgtcacaaatatcatttgtaggcacattattcataacggttacagcaataatgctgggagctttagtaaagcttcacttttcctctgtgcctgaatgggtcatcattgttatagtggcagtaattttcagcatattgaaatatctgttgaataggctaacagacagaatagcgaaccgaactattgaaaaggaagcgaatgaacaaaaacgctgggctactactgccaatgttactttgcagacaccctcctcattgacaataattcgcgactcaagtcctgtagcggcgcttgtacctacaattatatatcttaataacacagaggttgcatcaataaaaaacggagagtccgtaaccatacctataaagatgagaaacaacctgctacagacaaatgcagtcgttggacttaacggccgattggaaagatatgaatttgccgtacaggacggtgcacgtggcacaattcatgtgaagggcggtatttttgataaaaagaacgtcgtgtggcattagagaaatgtagtattaacacacctcagatagtgggggcataaaatagaaggaagaaatt
Predict ORF larger than 30AA ================================================
Protein_Len: 50	Strand: +	Start: 29	End: 178
............................ M  K  Q  K  K  Y  V  V  L  L  V  E  K  V  R  G  R  V  V  G  V  T  N  I  I  C  R  H  I  I  H  N  G  Y  S  N  N  A  G  S  F  S  K  A  S  L  F  L  C  A .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 34	Strand: +	Start: 299	End: 400
.......................................................................................................................................................................................................................................................................................................... M  G  Y  Y  C  Q  C  Y  F  A  D  T  L  L  I  D  N  N  S  R  L  K  S  C  S  G  A  C  T  Y  N  Y  I  S .......................................................................................................................................................................................................................................................................
Protein_Len: 60	Strand: +	Start: 45	End: 602
............................................ M  L  F  F  W  W  K  K  Y  E  G  A  W  W  A  S  Q  I  S  F  V  G  T  L  F  I  T  V  T  A  I  M  L  G  A  L  V  K  L  H  F  S  S  V  P  E  W  V  I  I  V  I  V  A  V  I  F  S  I  L .............................................................
Protein_Len: 41	Strand: -	Start: 502	End: 624
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... R  G  I  P  F  I  H  I  Q  R  V  P  R  H  V  H  C  L  E  H  S  P  R  Y  K  Q  Y  F  S  R  R  T  A  N  S  F  H  L  I  L  M .......................................
Protein_Len: 45	Strand: -	Start: 477	End: 611
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ L  C  I  C  D  N  S  K  V  A  S  Q  F  S  I  F  K  G  Y  L  V  T  C  T  A  C  N  M  H  L  A  T  N  K  I  F  L  V  D  H  P  M  L  S  M ....................................................
Protein_Len: 60	Strand: -	Start: 164	End: 556
................................................................................................................................................................... S  T  G  V  I  I  Y  R  L  L  V  S  T  A  D  I  F  F  P  S  D  T  V  M  G  I  F  I  L  F  L  R  S  C  V  F  A  T  T  P  S  L  P  R  N  S  L  Y  S  N  A  T  C  S  P  A  R  P  V  M ...........................................................................................................
Protein_Len: 33	Strand: -	Start: 19	End: 117
.................. L  P  P  M  F  C  F  F  Y  T  T  R  K  T  S  F  T  R  P  R  T  T  P  T  V  F  I  M  Q  L  C  M  M ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 46	Strand: -	Start: 2	End: 139
. I  I  A  E  T  V  A  P  A  Y  F  L  F  L  I  N  N  K  Q  H  F  F  Y  S  P  A  H  H  A  D  C  I  D  N  T  P  V  N  N  M  V  T  V  A  I  M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

taataatcgcttccgttacagcgggggcataaaacagaaaaagtatgttgttcttttggtggaaaaagtacgagggcgcgtggtgggcgtcacaaatatcatttgtaggcacattattcataacggttacagcaataatgctgggagctttagtaaagcttcacttttcctctgtgcctgaatgggtcatcattgttatagtggcagtaattttcagcatattgaaatatctgttgaataggctaacagacagaatagcgaaccgaactattgaaaaggaagcgaatgaacaaaaacgctgggctactactgccaatgttactttgcagacaccctcctcattgacaataattcgcgactcaagtcctgtagcggcgcttgtacctacaattatatatcttaataacacagaggttgcatcaataaaaaacggagagtccgtaaccatacctataaagatgagaaacaacctgctacagacaaatgcagtcgttggacttaacggccgattggaaagatatgaatttgccgtacaggacggtgcacgtggcacaattcatgtgaagggcggtatttttgataaaaagaacgtcgtgtggcattagagaaatgtagtattaacacacctcagatagtgggggcataaaatagaaggaagaaatt
Predict Promoter with matrix: RpoD-15 score > 80================================================

Predict Promoter with matrix: RpoD-16 score > 80================================================

Predict Promoter with matrix: RpoD-17 score > 80================================================

Predict Promoter with matrix: RpoD-18 score > 80================================================

Predict Promoter with matrix: RpoD-19 score > 80================================================

Predict Promoter with matrix: RpoN score > 80================================================

taataatcgcttccgttacagcgggggcataaaacagaaaaagtatgttgttcttttggtggaaaaagtacgagggcgcgtggtgggcgtcacaaatatcatttgtaggcacattattcataacggttacagcaataatgctgggagctttagtaaagcttcacttttcctctgtgcctgaatgggtcatcattgttatagtggcagtaattttcagcatattgaaatatctgttgaataggctaacagacagaatagcgaaccgaactattgaaaaggaagcgaatgaacaaaaacgctgggctactactgccaatgttactttgcagacaccctcctcattgacaataattcgcgactcaagtcctgtagcggcgcttgtacctacaattatatatcttaataacacagaggttgcatcaataaaaaacggagagtccgtaaccatacctataaagatgagaaacaacctgctacagacaaatgcagtcgttggacttaacggccgattggaaagatatgaatttgccgtacaggacggtgcacgtggcacaattcatgtgaagggcggtatttttgataaaaagaacgtcgtgtggcattagagaaatgtagtattaacacacctcagatagtgggggcataaaatagaaggaagaaatt
Predict TransTerm conf > 70================================================
TransTerm Strand: -	Conf: 91	HP_score: -6.8	Tail_Score: -5.5112	Start: 431	End: 441	Full_Region: ttataggtatggtta cgga ctc tccg ttttttattgatgca
..............................................................................................................................................................................................................................................................................................................................................................................................................................................cggactctccg..............................................................................................................................................................................................................................

Find igs database================================================
Query_seq: TF1297:TF1298|TF1297:TF1298:hypothetical protein:possible membrane protein:->->:1379584..1380246 663
taataatcgcttccgttacagcgggggcataaaacagaaaaagtatgttgttcttttggtggaaaaagtacgagggcgcgtggtgggcgtcacaaatatcatttgtaggcacattattcataacggttacagcaataatgctgggagctttagtaaagcttcacttttcctctgtgcctgaatgggtcatcattgttatagtggcagtaattttcagcatattgaaatatctgttgaataggctaacagacagaatagcgaaccgaactattgaaaaggaagcgaatgaacaaaaacgctgggctactactgccaatgttactttgcagacaccctcctcattgacaataattcgcgactcaagtcctgtagcggcgcttgtacctacaattatatatcttaataacacagaggttgcatcaataaaaaacggagagtccgtaaccatacctataaagatgagaaacaacctgctacagacaaatgcagtcgttggacttaacggccgattggaaagatatgaatttgccgtacaggacggtgcacgtggcacaattcatgtgaagggcggtatttttgataaaaagaacgtcgtgtggcattagagaaatgtagtattaacacacctcagatagtgggggcataaaatagaaggaagaaatt
Intra-Species Hit: Count: 1	Min: 1	Max: 663	Len: 663
Subject: tfor_TF1297_TF1298|hypothetical protein:possible membrane protein|POSITIVE:POSITIVE|[1379584,1380246]|663
HSP  1	e-value: 0.0	bit: 1314.0	Len: 663	Query Start:1	Query End:663	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 663
taataatcgcttccgttacagcgggggcataaaacagaaaaagtatgttgttcttttggtggaaaaagtacgagggcgcgtggtgggcgtcacaaatatcatttgtaggcacattattcataacggttacagcaataatgctgggagctttagtaaagcttcacttttcctctgtgcctgaatgggtcatcattgttatagtggcagtaattttcagcatattgaaatatctgttgaataggctaacagacagaatagcgaaccgaactattgaaaaggaagcgaatgaacaaaaacgctgggctactactgccaatgttactttgcagacaccctcctcattgacaataattcgcgactcaagtcctgtagcggcgcttgtacctacaattatatatcttaataacacagaggttgcatcaataaaaaacggagagtccgtaaccatacctataaagatgagaaacaacctgctacagacaaatgcagtcgttggacttaacggccgattggaaagatatgaatttgccgtacaggacggtgcacgtggcacaattcatgtgaagggcggtatttttgataaaaagaacgtcgtgtggcattagagaaatgtagtattaacacacctcagatagtgggggcataaaatagaaggaagaaatt
taataatcgcttccgttacagcgggggcataaaacagaaaaagtatgttgttcttttggtggaaaaagtacgagggcgcgtggtgggcgtcacaaatatcatttgtaggcacattattcataacggttacagcaataatgctgggagctttagtaaagcttcacttttcctctgtgcctgaatgggtcatcattgttatagtggcagtaattttcagcatattgaaatatctgttgaataggctaacagacagaatagcgaaccgaactattgaaaaggaagcgaatgaacaaaaacgctgggctactactgccaatgttactttgcagacaccctcctcattgacaataattcgcgactcaagtcctgtagcggcgcttgtacctacaattatatatcttaataacacagaggttgcatcaataaaaaacggagagtccgtaaccatacctataaagatgagaaacaacctgctacagacaaatgcagtcgttggacttaacggccgattggaaagatatgaatttgccgtacaggacggtgcacgtggcacaattcatgtgaagggcggtatttttgataaaaagaacgtcgtgtggcattagagaaatgtagtattaacacacctcagatagtgggggcataaaatagaaggaagaaatt

Inter-species Hit: Count: 0

Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
UAAUAAUCGCUUCCGUUACAGCGGGGGCAUAAAACAGAAAAAGUAUGUUGUUCUUUUGGUGGAAAAAGUACGAGGGCGCGUGGUGGGCGUCACAAAUAUCAUUUGUAGGCACAUUAUUCAUAACGGUUACAGCAAUAAUGCUGGGAGCUUUAGUAAAGCUUCACUUUUCCUCUGUGCCUGAAUGGGUCAUCAUUGUUAUAGUGGCAGUAAUUUUCAGCAUAUUGAAAUAUCUGUUGAAUAGGCUAACAGACAGAAUAGCGAACCGAACUAUUGAAAAGGAAGCGAAUGAACAAAAACGCUGGGCUACUACUGCCAAUGUUACUUUGCAGACACCCUCCUCAUUGACAAUAAUUCGCGACUCAAGUCCUGUAGCGGCGCUUGUACCUACAAUUAUAUAUCUUAAUAACACAGAGGUUGCAUCAAUAAAAAACGGAGAGUCCGUAACCAUACCUAUAAAGAUGAGAAACAACCUGCUACAGACAAAUGCAGUCGUUGGACUUAACGGCCGAUUGGAAAGAUAUGAAUUUGCCGUACAGGACGGUGCACGUGGCACAAUUCAUGUGAAGGGCGGUAUUUUUGAUAAAAAGAACGUCGUGUGGCAUUAGAGAAAUGUAGUAUUAACACACCUCAGAUAGUGGGGGCAUAAAAUAGAAGGAAGAAAUU
........((((((((....))))))))...............(((((.((((((((.((.(((((.((((..(((((((.((.(((.(((.......((((((..(((((((................(((((....)))))(((((((.....)))))))..........))))))))))))).....((..((.(((.((((((((...((((((...........(((((((.......))))))).......((...((.............))..))..............))))))....)))))))).))).))..))..))).))).))...............)))).)))..((((((((.((((..((((....))))...((((((((........((((((((..((........((((.....))))...(((..........))).))..)))))).))...........(((((((((.......))).))))))..)))))))).....)))))))))))).)))).(((..((((.....))))....)))...))))).)).))))))))...((((...((((.(....).))))....)))).(((((.....)))))))))).................. (-175.41)

Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
AAUUUCUUCCUUCUAUUUUAUGCCCCCACUAUCUGAGGUGUGUUAAUACUACAUUUCUCUAAUGCCACACGACGUUCUUUUUAUCAAAAAUACCGCCCUUCACAUGAAUUGUGCCACGUGCACCGUCCUGUACGGCAAAUUCAUAUCUUUCCAAUCGGCCGUUAAGUCCAACGACUGCAUUUGUCUGUAGCAGGUUGUUUCUCAUCUUUAUAGGUAUGGUUACGGACUCUCCGUUUUUUAUUGAUGCAACCUCUGUGUUAUUAAGAUAUAUAAUUGUAGGUACAAGCGCCGCUACAGGACUUGAGUCGCGAAUUAUUGUCAAUGAGGAGGGUGUCUGCAAAGUAACAUUGGCAGUAGUAGCCCAGCGUUUUUGUUCAUUCGCUUCCUUUUCAAUAGUUCGGUUCGCUAUUCUGUCUGUUAGCCUAUUCAACAGAUAUUUCAAUAUGCUGAAAAUUACUGCCACUAUAACAAUGAUGACCCAUUCAGGCACAGAGGAAAAGUGAAGCUUUACUAAAGCUCCCAGCAUUAUUGCUGUAACCGUUAUGAAUAAUGUGCCUACAAAUGAUAUUUGUGACGCCCACCACGCGCCCUCGUACUUUUUCCACCAAAAGAACAACAUACUUUUUCUGUUUUAUGCCCCCGCUGUAACGGAAGCGAUUAUUA
((((.(((((........((((..............(((((((..........(((((((..((((....((((..((((((((....((((.(((..((((........((((.....)))).((((((((((((......(((((((.......(((.....((((....))))......)))..(((.(((((((.((..((((....))))......((((.....))))........)).)))))))))).......)))))))....((((....))))..)))).)))))))).))))..)))...))))....))))))))..)))).............((((((((((....((((((..(((..................((((((.......)))))).((((((((.........))))))))...))).))))))...)))))))))).......................)))).)))))))..(((.(((((.....)))))..(((((....)))))....(((((..((((.(((........))).))))..)))))..))).)))))))...((.(((((......))))).))..))))...............((....))......))))).)))).... (-156.40)

Find mRNA Target Using  Conserved IGS================================================
5'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
425	569	525	221	182	tfor:TF0617|5end_alpha-1,2-mannosidase_650862..651092_POSITIVE
381	91	52	231	197	tfor:TF0904|5end_conserved_hypothetical_protein_948435..948665_POSITIVE
380	109	71	67	22	tfor:TF1464|5end_conserved_hypothetical_protein_1553467..1553697_POSITIVE
368	549	503	203	156	tfor:TF0114|5end_conserved_hypothetical_protein_123852..124082_POSITIVE
367	549	503	88	44	tfor:TF1925|5end_hypothetical_protein_2074458..2074688_POSITIVE
367	549	503	45	1	tfor:TF1926|5end_hypothetical_protein_2074415..2074645_POSITIVE
367	549	503	188	144	tfor:TF1916|5end_conserved_hypothetical_protein;_possible_ATPase_2068530..2068760_POSITIVE
366	573	537	80	38	tfor:TF0710|5end_two_component_system_histidine_kinase_757250..757480_POSITIVE
364	570	524	75	10	tfor:TF1485|5end_conserved_hypothetical_protein_1581871..1582101_POSITIVE
363	90	41	64	9	tfor:TF2513|5end_conserved_hypothetical_protein_2691146..2691376_POSITIVE
361	90	47	176	125	tfor:TF2129|5end_possible_3-oxoacyl-(acyl-carrier-protein)_synthase_2305464..2305694_POSITIVE
358	110	70	230	196	tfor:TF2440|5end_conserved_hypothetical_protein;_possible_DNA_mismatch_repair_protein_2616858..2617088_POSITIVE
356	119	73	215	169	tfor:TF0559|5end_methanol_dehydrogenase_regulator,_MoxR-like;_magnesium_chelatase,_subunit_I_591015..591245_POSITIVE
353	114	72	231	194	tfor:TF2855|5end_ATPase,_AAA_family_3040657..3040887_POSITIVE
353	550	503	205	167	tfor:TF1777|5end_conserved_hypothetical_protein_1916653..1916883_POSITIVE
347	91	51	192	146	tfor:TF3024|5end_periplasmic_protease_3247204..3247434_POSITIVE
347	567	524	105	66	tfor:TF2487|5end_transposase_2663010..2663240_POSITIVE
346	570	527	50	1	tfor:TF2354|5end_dihydropteroate_synthase_2518541..2518771_POSITIVE
344	520	472	222	164	tfor:TF1910|5end_nicotinate-nucleotide--dimethylbenzimidazole_phosphoribosyltransferase_2064001..2064231_POSITIVE
343	517	486	216	187	tfor:TF1498|5end_GTP-binding_protein_1597520..1597750_POSITIVE

3'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
367	549	503	67	23	tfor:TF1915|3end_NAD-dependent_protein_deacetylase,_SIR2_family_2068489..2068639_POSITIVE
363	98	51	147	97	tfor:TF1327|3end_L-fucose_permease_1407195..1407345_POSITIVE
362	569	528	56	11	tfor:TF0358|3end_hypothetical_protein_376304..376454_POSITIVE
343	517	486	135	106	tfor:TF1497|3end_GTP-binding_protein,_Era/ThdF_family_1597519..1597669_POSITIVE
343	570	526	53	7	tfor:TF0825|3end_hypothetical_protein_883850..884000_POSITIVE
340	517	471	133	69	tfor:TF0279|3end_conserved_hypothetical_protein_308679..308829_POSITIVE
338	90	57	40	3	tfor:TF2512|3end_possible_abortive_infection_protein_2691202..2691352_POSITIVE
335	549	503	136	77	tfor:TF2782|3end_conserved_hypothetical_protein_2967356..2967506_POSITIVE
333	444	407	49	12	tfor:TF0778|3end_outer_membrane_protein,_TonB_dependent_receptor_830402..830552_POSITIVE
332	570	529	50	9	tfor:TF2256|3end_transfer_region-related_protein,_TraI_2428614..2428764_POSITIVE
330	570	528	79	32	tfor:TF1468|3end_beta-galactosidase_1561251..1561401_POSITIVE
329	89	43	142	98	tfor:TF0139|3end_4-diphosphocytidyl-2c-methyl-D-erythritol_synthase_(MEP_cytidylyltransferase)_(MCT)_148269..148419_POSITIVE
325	572	535	53	3	tfor:TF1623|3end_5-formyltetrahydrofolate_cyclo-ligase_1737332..1737482_POSITIVE
325	110	61	108	63	tfor:TF1336|3end_hypothetical_protein_1419575..1419725_POSITIVE
321	548	507	86	31	tfor:TF1622|3end_conserved_hypothetical_protein_1736763..1736913_POSITIVE
320	580	531	77	19	tfor:TF0360|3end_hypothetical_protein_379538..379688_POSITIVE
320	86	41	142	87	tfor:TF0061|3end_hypothetical_protein_65006..65156_POSITIVE
318	545	503	66	20	tfor:TF2456|3end_ABC_transporter,_ATP-binding_protein_2633208..2633358_POSITIVE
317	544	504	60	8	tfor:TF0451|3end_rhomboid_family_membrane_protein_471046..471196_POSITIVE
316	570	529	130	77	tfor:TF1918|3end_hypothetical_protein_2070105..2070255_POSITIVE