Origin IGS: attacgcgatacacggttcggcgtttaccattaataatgaacgtacgaatgtacgacaagggttacgtcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgcattgggctgaattaacacgccctttcagggctcttacagcagtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgtgcatatcggcgtta .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 taacgccgatatgcacatccccctttccccccttccaaggaggaatgcggaactgacggctgactgctgtaagagccctgaaagggcgtgttaattcagcccaatgcgaagcgctggggaaaaaggcatcgcgtctcggcgaagggctgtaagcctgacgtaacccttgtcgtacattcgtacgttcattattaatggtaaacgccgaaccgtgtatcgcgtaat Mask Tandem Repeat Region ================================================ attacgcgatacacggttcggcgtttaccattaataatgaacgtacgaatgtacgacaagggttacgtcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgcattgggctgaattaacacgccctttcagggctcttacagcagtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgtgcatatcggcgtta Find is-nt database================================================ Query_seq: TF0339:TF0340|TF0339:TF0340:hypothetical protein:hypothetical protein:->->:363808..364032 225 attacgcgatacacggttcggcgtttaccattaataatgaacgtacgaatgtacgacaagggttacgtcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgcattgggctgaattaacacgccctttcagggctcttacagcagtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgtgcatatcggcgtta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: TF0339:TF0340|TF0339:TF0340:hypothetical protein:hypothetical protein:->->:363808..364032 225 attacgcgatacacggttcggcgtttaccattaataatgaacgtacgaatgtacgacaagggttacgtcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgcattgggctgaattaacacgccctttcagggctcttacagcagtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgtgcatatcggcgtta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: TF0339:TF0340|TF0339:TF0340:hypothetical protein:hypothetical protein:->->:363808..364032 225 attacgcgatacacggttcggcgtttaccattaataatgaacgtacgaatgtacgacaagggttacgtcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgcattgggctgaattaacacgccctttcagggctcttacagcagtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgtgcatatcggcgtta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 attacgcgatacacggttcggcgtttaccattaataatgaacgtacgaatgtacgacaagggttacgtcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgcattgggctgaattaacacgccctttcagggctcttacagcagtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgtgcatatcggcgtta Predict ORF larger than 30AA ================================================ Protein_Len: 44 Strand: + Start: 1 End: 132 M T R Y T V R R L P L I M N V R M Y D K G Y V R L T A L R R D A M P F S P A L R I G L N ............................................................................................. Protein_Len: 31 Strand: + Start: 131 End: 223 .................................................................................................................................. M N T P F Q G S Y S S Q P S V P H S S L E G G K G G C A Y R R .. Protein_Len: 60 Strand: + Start: 9 End: 224 ........ M H G S A F T I N N E R T N V R Q G L R Q A Y S P S P R R D A F F P S A S H W A E L T R P F R A L T A V S R Q F R I P P . Protein_Len: 30 Strand: - Start: 77 End: 166 ............................................................................ L G E G L R S A K K G L A E C Q A S N V R G K L A R V A T M ........................................................... Protein_Len: 35 Strand: - Start: 34 End: 138 ................................. Y H V Y S H V V L T V D P K C G K A S V R H R K G W R K A N P Q I L M ....................................................................................... attacgcgatacacggttcggcgtttaccattaataatgaacgtacgaatgtacgacaagggttacgtcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgcattgggctgaattaacacgccctttcagggctcttacagcagtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgtgcatatcggcgtta Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ attacgcgatacacggttcggcgtttaccattaataatgaacgtacgaatgtacgacaagggttacgtcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgcattgggctgaattaacacgccctttcagggctcttacagcagtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgtgcatatcggcgtta Predict TransTerm conf > 70================================================ Find igs database================================================ Query_seq: TF0339:TF0340|TF0339:TF0340:hypothetical protein:hypothetical protein:->->:363808..364032 225 attacgcgatacacggttcggcgtttaccattaataatgaacgtacgaatgtacgacaagggttacgtcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgcattgggctgaattaacacgccctttcagggctcttacagcagtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgtgcatatcggcgtta Intra-Species Hit: Count: 18 Min: 1 Max: 225 Len: 225 Subject: tfor_TF0339_TF0340|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[363808,364032]|225 HSP 1 e-value: 1.0E-124 bit: 446.0 Len: 225 Query Start:1 Query End:225 Subject Strand: POSITIVE Subject Start: 1 Subject End: 225 attacgcgatacacggttcggcgtttaccattaataatgaacgtacgaatgtacgacaagggttacgtcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgcattgggctgaattaacacgccctttcagggctcttacagcagtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgtgcatatcggcgtta attacgcgatacacggttcggcgtttaccattaataatgaacgtacgaatgtacgacaagggttacgtcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgcattgggctgaattaacacgccctttcagggctcttacagcagtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgtgcatatcggcgtta Subject: tfor_TF2165_TF2166|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2341983,2342254]|272 HSP 1 e-value: 4.0E-63 bit: 242.0 Len: 158 Query Start:68 Query End:225 Subject Strand: POSITIVE Subject Start: 115 Subject End: 272 ...................................................................tcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgcattgggctgaattaacacgccctttcagggctcttacagcagtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgtgcatatcggcgtta ...................................................................tcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgcattgggctgaattaatgcgcccctgcggagctgttacagcggtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgttcatatcggcgtta Subject: tfor_TF2047_TF2048|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[2210359,2210782]|424 HSP 1 e-value: 1.0E-57 bit: 224.0 Len: 173 Query Start:1 Query End:173 Subject Strand: POSITIVE Subject Start: 1 Subject End: 173 attacgcgatacacggttcggcgtttaccattaataatgaacgtacgaatgtacgacaagggttacgtcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgcattgggctgaattaacacgccctttcagggctcttacagcagtcagccgtcag.................................................... attacgcgatacactgttcggcgtttaccattaatcatggacgtacgaatgcacgacaatggttacgtcaggcttacagccctccgccgggatgcgatgcctttttccccaacgcttcgcattgggctgaattatctcgccctttcagggctctttctgcaatcagcagtcag.................................................... Subject: tfor_TF0344_TF0346|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[367024,367187]|164 HSP 1 e-value: 1.0E-57 bit: 224.0 Len: 121 Query Start:101 Query End:221 Subject Strand: POSITIVE Subject Start: 40 Subject End: 160 ....................................................................................................ctttttccccagcgcttcgcattgggctgaattaacacgccctttcagggctcttacagcagtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgtgcatatcggc.... ....................................................................................................ctttttccccagcgcttcgcattgggctgaattaacacgccctttcagggctcttacagcagtcagccgtcagttccgcattcctccttggaagggggggaagggggatgttcatatcggc.... Subject: tfor_TF0029_TF0030|hypothetical protein:N-acetylneuraminate lyase|POSITIVE:POSITIVE|[25123,25909]|787 HSP 1 e-value: 1.0E-54 bit: 214.0 Len: 167 Query Start:1 Query End:167 Subject Strand: NEGATIVE Subject Start: 371 Subject End: 538 attacgcgatacacggttcggcgtttaccattaataatgaacgtacgaatgtacgacaagggttacgtcaggcttacagcccttcgccgagacgcgatgc-ctttttccccagcgcttcgcattgggctgaattaacacgccctttcagggctcttacagcagtcagc.......................................................... attacgcgatacactgttcggtgtttaccattaataatggacgtacgaatgtacgacaatggttacgtcaagcttacagccctccgccgagatgcgatgctttttttccccaacgcttcgcattgggctgaattattatgccctttcagggcttttacagcagtcagc.......................................................... Subject: tfor_TF1273_TF1274|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1357523,1357760]|238 HSP 1 e-value: 2.0E-46 bit: 186.0 Len: 134 Query Start:1 Query End:134 Subject Strand: POSITIVE Subject Start: 103 Subject End: 236 attacgcgatacacggttcggcgtttaccattaataatgaacgtacgaatgtacgacaagggttacgtcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgcattgggctgaatta........................................................................................... attacgcgatacactgttcggcgtttaccattaatcatggacgtacgaatgcacgacaatggttacgtcaggcttacagccctccgccgggatgcgatgccttttcccccaacgcttcgcattgggctgaatta........................................................................................... Subject: tfor_TF0179_TF0180|pyrophosphate-energized proton pump:carboxynorspermidine decarboxylase|POSITIVE:POSITIVE|[190752,191406]|655 HSP 1 e-value: 9.0E-46 bit: 184.0 Len: 132 Query Start:1 Query End:132 Subject Strand: POSITIVE Subject Start: 137 Subject End: 273 attacgcgatacacggttcggcgtttaccatt-----aataatgaacgtacgaatgtacgacaagggttacgtcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgcattgggctgaat............................................................................................. attacgcgatacactgttgggcgtttaccattacattaataatgtacgtacgaatgtacgacaagggttacgtcaggcttacagccctccgccgagacgcgatgccttttttcccaacgcttcgcattgggctgaat............................................................................................. Subject: tfor_TF0585_TF0586|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[616824,617452]|629 HSP 1 e-value: 5.0E-41 bit: 168.0 Len: 113 Query Start:20 Query End:132 Subject Strand: NEGATIVE Subject Start: 388 Subject End: 500 ...................ggcgtttaccattaataatgaacgtacgaatgtacgacaagggttacgtcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgcattgggctgaat............................................................................................. ...................ggcgtttaccattaataatggacgtacgaatgtacgacaagggttacgtcaggcttacagccctccgccgaaatgtgaagcctttttccccaacgcttcgcattgggctgaat............................................................................................. Subject: tfor_TF2171_TF2173|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2345853,2345955]|103 HSP 1 e-value: 8.0E-40 bit: 165.0 Len: 103 Query Start:123 Query End:225 Subject Strand: POSITIVE Subject Start: 1 Subject End: 103 ..........................................................................................................................tgggctgaattaacacgccctttcagggctcttacagcagtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgtgcatatcggcgtta ..........................................................................................................................tgggctgaattaacgcgcccctgcggggctcttacagcagtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgttcatatcggcgtta Subject: tfor_TF1182_TF1184|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1268999,1269143]|145 HSP 1 e-value: 8.0E-37 bit: 155.0 Len: 110 Query Start:63 Query End:172 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 110 ..............................................................ttacgtcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgcattgggctgaattaacacgccctttcagggctcttacagcagtcagccgtca..................................................... ..............................................................ttacgtcaggcttacagcccttcgccgagatgcgatgcctttttcccaaacgcttcgcattgggctgaattatctcgccctttcagggctgttacagcggtcagcagtca..................................................... Subject: tfor_TF0467_TF0468|acetyltransferase-related protein:hypothetical protein|POSITIVE:POSITIVE|[486604,487068]|465 HSP 1 e-value: 3.0E-36 bit: 153.0 Len: 120 Query Start:1 Query End:120 Subject Strand: POSITIVE Subject Start: 29 Subject End: 149 attacgcgatacacggttcggcgtttaccattaataatgaacgtacgaatgtacgacaagggttacgtcaggc-ttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgc......................................................................................................... attacgcgatacattgttcggcgtttaccattaataatggacgtgcgaatgtacgacaatggttacgtcaggcttttcagccctccgccgagatgcgatgcctttttccccaacgcttcgc......................................................................................................... HSP 2 e-value: 5.0E-7 bit: 56.0 Len: 40 Query Start:113 Query End:152 Subject Strand: POSITIVE Subject Start: 335 Subject End: 374 ................................................................................................................cgcttcgcattgggctgaattaacacgccctttcagggct......................................................................... ................................................................................................................cgctacgcattgggctgaattattacgccctttcagggct......................................................................... Subject: tfor_TF1473_TF1474|hypothetical protein:6- phosphogluconolactonase|POSITIVE:POSITIVE|[1567027, 1567481]|455 HSP 1 e-value: 3.0E-33 bit: 143.0 Len: 129 Query Start:4 Query End:132 Subject Strand: POSITIVE Subject Start: 42 Subject End: 172 ...acgcgatacacggttcggcgtttaccattaataatgaacgtacgaatgtacgacaagggttacgtcaggcttacagcccttcgccgagacgcgatgccttttt--ccccagcgcttcgcattgggctgaat............................................................................................. ...acgcgatatactgttgggcgttttccattaataatggacgtatgaatgtacgacaatggttacgtcaggcttacagccctccgccgagatacgatgctttttttcccccaacgcttcgcattgggctgaat............................................................................................. Subject: tfor_TF2169_TF2171|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2345415,2345624]|210 HSP 1 e-value: 5.0E-32 bit: 139.0 Len: 106 Query Start:120 Query End:225 Subject Strand: POSITIVE Subject Start: 105 Subject End: 210 .......................................................................................................................cattgggctgaattaacacgccctttcagggctcttacagcagtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgtgcatatcggcgtta .......................................................................................................................cattgggctgaattaatgcgcccctgcggagctgttacagcggtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgttcatatcggcgtta Subject: tfor_TF0365_TF0366|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[383213,383703]|491 HSP 1 e-value: 1.0E-29 bit: 131.0 Len: 102 Query Start:120 Query End:221 Subject Strand: POSITIVE Subject Start: 386 Subject End: 487 .......................................................................................................................cattgggctgaattaacacgccctttcagggctcttacagcagtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgtgcatatcggc.... .......................................................................................................................cattgggctgaattaacgcaccccttcggagctgttacagtggtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgttcatatcggc.... Subject: tfor_TF0361_TF0362|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[379871,380091]|221 HSP 1 e-value: 3.0E-27 bit: 123.0 Len: 102 Query Start:120 Query End:221 Subject Strand: POSITIVE Subject Start: 116 Subject End: 217 .......................................................................................................................cattgggctgaattaacacgccctttcagggctcttacagcagtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgtgcatatcggc.... .......................................................................................................................cattgggctgaattaacgcatcccttcggagctgttacagtggtcagccgtcagttccgcattcctccttggaaggggggaaagggggatgttcatatcggc.... Subject: tfor_TF0685_TF0686|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[731193,732338]|1146 HSP 1 e-value: 1.0E-16 bit: 87.7 Len: 105 Query Start:63 Query End:167 Subject Strand: POSITIVE Subject Start: 765 Subject End: 879 ..............................................................ttacgtcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcg----------cattgggctgaattaacacgccctttcagggctcttacagcagtcagc.......................................................... ..............................................................ttacgtcaggcttacagccctccgccgagatgcgatgccttttttcccaacgcttcgctgcgctccacattgggctgaattaatgcgccctttcagggctgttacaacggtcagc.......................................................... Subject: tfor_TF2201_TF2202|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2378345,2378821]|477 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 52 Query Start:101 Query End:152 Subject Strand: POSITIVE Subject Start: 317 Subject End: 368 ....................................................................................................ctttttccccagcgcttcgcattgggctgaattaacacgccctttcagggct......................................................................... ....................................................................................................ctttttccccaacgcttcgcattgggctgaattatctcgccctttcagggct......................................................................... HSP 2 e-value: 5.0E-10 bit: 65.9 Len: 61 Query Start:23 Query End:83 Subject Strand: POSITIVE Subject Start: 241 Subject End: 301 ......................gtttaccattaataatgaacgtacgaatgtacgacaagggttacgtcaggcttacagccct.............................................................................................................................................. ......................gtttaccattaataatggatgtgcaaatgtatgacaatggttatgtcaggcttacagccct.............................................................................................................................................. Subject: tfor_TF2914_TF2915|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[3109704,3110561]|858 HSP 1 e-value: 1.0E-10 bit: 67.9 Len: 105 Query Start:63 Query End:167 Subject Strand: POSITIVE Subject Start: 353 Subject End: 461 ..............................................................ttacgtcaggcttacagcccttcgccgagacgcgatgcctttttccccagcgcttcgc-----attgggctgaattaacacgccctttcagggctcttacagcagtcagc.......................................................... ..............................................................ttacgtcaggctttcagccctccgccgagggggg-tgcctgttttcccaacgcttcgctgcacattgggctgaattaacgtgccctttcagggcttttacagcggtcagc.......................................................... Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AUUACGCGAUACACGGUUCGGCGUUUACCAUUAAUAAUGAACGUACGAAUGUACGACAAGGGUUACGUCAGGCUUACAGCCCUUCGCCGAGACGCGAUGCCUUUUUCCCCAGCGCUUCGCAUUGGGCUGAAUUAACACGCCCUUUCAGGGCUCUUACAGCAGUCAGCCGUCAGUUCCGCAUUCCUCCUUGGAAGGGGGGAAAGGGGGAUGUGCAUAUCGGCGUUA ...((((((((.....(((((((..................(((((....)))))..(((((((.............))))))))))))))..(((((.(((((((((((.(((....(.((((((((((........((((.....))))...........))))))..)))).)))).((((.....))))..))))))))))).)).))).)))).)))).. (-75.43) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAACGCCGAUAUGCACAUCCCCCUUUCCCCCCUUCCAAGGAGGAAUGCGGAACUGACGGCUGACUGCUGUAAGAGCCCUGAAAGGGCGUGUUAAUUCAGCCCAAUGCGAAGCGCUGGGGAAAAAGGCAUCGCGUCUCGGCGAAGGGCUGUAAGCCUGACGUAACCCUUGUCGUACAUUCGUACGUUCAUUAUUAAUGGUAAACGCCGAACCGUGUAUCGCGUAAU ..((((.(((((((.....((..((((((((((((((.((..((((....(((..(((((.....)))))....((((.....))))..))).))))..))...)).)))).)..)))))))..)).........((((((..((((.....))))..(((......((.(((((....)))))..))......))).....))))))...)))))))))))... (-72.00) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1040 120 71 65 16 tfor:TF3107|5end_hypothetical_protein_3338459..3338689_POSITIVE 1040 120 71 218 169 tfor:TF1187|5end_hypothetical_protein_1269625..1269855_POSITIVE 1040 120 71 161 112 tfor:TF1186|5end_hypothetical_protein_1269568..1269798_POSITIVE 1023 130 81 167 118 tfor:TF1183|5end_hypothetical_protein_1268391..1268621_POSITIVE 964 120 71 184 135 tfor:TF1184|5end_hypothetical_protein_1269004..1269234_POSITIVE 948 150 101 188 138 tfor:TF2824|5end_nucleoside-transporting_protein_nupG_3014701..3014931_POSITIVE 945 130 81 56 8 tfor:TF0821|5end_hypothetical_protein_879879..880109_POSITIVE 908 150 101 197 148 tfor:TF0828|5end_hypothetical_protein_887090..887320_POSITIVE 890 150 101 114 65 tfor:TF2191|5end_hypothetical_protein_2365934..2366164_POSITIVE 890 150 101 76 27 tfor:TF0822|5end_hypothetical_protein_880487..880717_POSITIVE 785 150 101 217 164 tfor:TF2478|5end_hypothetical_protein_2655375..2655605_POSITIVE 762 160 113 184 137 tfor:TF2517|5end_hypothetical_protein_2695089..2695319_POSITIVE 737 90 41 188 141 tfor:TF0823|5end_conserved_hypothetical_protein_880660..880890_POSITIVE 725 150 101 121 61 tfor:TF0538|5end_hypothetical_protein_566891..567121_POSITIVE 725 150 101 114 54 tfor:TF0539|5end_hypothetical_protein_566884..567114_POSITIVE 687 150 101 114 54 tfor:TF0679|5end_hypothetical_protein_721155..721385_POSITIVE 687 150 101 62 2 tfor:TF0678|5end_hypothetical_protein_721103..721333_POSITIVE 674 209 161 208 159 tfor:TF0536|5end_conserved_hypothetical_protein_561917..562147_POSITIVE 613 143 102 103 51 tfor:TF1716|5end_hypothetical_protein_1837442..1837672_POSITIVE 605 145 101 214 170 tfor:TF2036|5end_possible_pyruvate_formate-lyase_activating_enzyme_2196302..2196532_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1096 130 81 124 75 tfor:TF2547|3end_hypothetical_protein_2730947..2731097_POSITIVE 1040 120 71 134 85 tfor:TF3106|3end_hypothetical_protein_3338608..3338758_POSITIVE 1040 120 71 76 27 tfor:TF1185|3end_hypothetical_protein_1269563..1269713_POSITIVE 885 130 83 48 1 tfor:TF1182|3end_hypothetical_protein_1268938..1269088_POSITIVE 815 150 101 59 11 tfor:TF0820|3end_hypothetical_protein_879942..880092_POSITIVE 710 90 46 142 100 tfor:TF0678|3end_hypothetical_protein_721335..721485_POSITIVE 705 150 102 80 23 tfor:TF2840|3end_hypothetical_protein_3031289..3031439_POSITIVE 596 160 113 61 9 tfor:TF0533|3end_hypothetical_protein_559519..559669_POSITIVE 553 220 173 83 28 tfor:TF0828|3end_hypothetical_protein_887508..887658_POSITIVE 544 120 71 141 91 tfor:TF1405|3end_conserved_hypothetical_protein_1481819..1481969_POSITIVE 538 220 173 108 54 tfor:TF0821|3end_hypothetical_protein_880195..880345_POSITIVE 518 220 173 129 73 tfor:TF0370|3end_hypothetical_protein_386317..386467_POSITIVE 514 218 173 94 46 tfor:TF2651|3end_hypothetical_protein_2822014..2822164_POSITIVE 511 210 163 150 88 tfor:TF2816|3end_hypothetical_protein_3007184..3007334_POSITIVE 483 183 141 89 41 tfor:TF0685|3end_hypothetical_protein_731132..731282_POSITIVE 446 110 68 131 88 tfor:TF1274|3end_hypothetical_protein_1357895..1358045_POSITIVE 431 195 159 116 77 tfor:TF1660|3end_hypothetical_protein_1775600..1775750_POSITIVE 420 100 53 116 72 tfor:TF1184|3end_hypothetical_protein_1269311..1269461_POSITIVE 411 120 72 149 95 tfor:TF3105|3end_hypothetical_protein_3338342..3338492_POSITIVE 408 100 54 134 72 tfor:TF3087|3end_conserved_hypothetical_protein_3322582..3322732_POSITIVE