Origin IGS: tgagaaaaaggcaagaaacagcctctataccctgacgcaggctatgggtcaaaggacgatgtagtcaaggaatgtggtatgattcctgttatctgtgagaaagactatcgaaatcatcttcttaccgacgatcagaagctgaacaaccacccaaagtccaagacaagatgtcgtgtggagcacatcttcggtttcatcgagggtttcatgaacggttcgtttgtctgcagcatcgtaatcgtccgtgccaagactgtaatggctttcatctgtctcatatacaacaaattcaaatatgtacagatcaataaataccagctgtagcttattgcctctaaggggtaactgtgtcttaacgtcaataaatcaagttaaatgagaggataaacgaacactatcgtgagtctgagatgccctttgaggagctgaatccaactgaactgactcagaaggaacggcttccacttacaaaaattcttttttagaacttatctaaaataatcagcagtttaatcttattctttttgtatggaattatattctacaaaattctgaattttaataatttaattgattcttttgccaaagtattgatagaatgtataagataaaaaatgtttattttgaacaataattccatttgatgcagcgtttctacataaagttgcatcatgcaagtaaaagcataaaaa .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 tttttatgcttttacttgcatgatgcaactttatgtagaaacgctgcatcaaatggaattattgttcaaaataaacattttttatcttatacattctatcaatactttggcaaaagaatcaattaaattattaaaattcagaattttgtagaatataattccatacaaaaagaataagattaaactgctgattattttagataagttctaaaaaagaatttttgtaagtggaagccgttccttctgagtcagttcagttggattcagctcctcaaagggcatctcagactcacgatagtgttcgtttatcctctcatttaacttgatttattgacgttaagacacagttaccccttagaggcaataagctacagctggtatttattgatctgtacatatttgaatttgttgtatatgagacagatgaaagccattacagtcttggcacggacgattacgatgctgcagacaaacgaaccgttcatgaaaccctcgatgaaaccgaagatgtgctccacacgacatcttgtcttggactttgggtggttgttcagcttctgatcgtcggtaagaagatgatttcgatagtctttctcacagataacaggaatcataccacattccttgactacatcgtcctttgacccatagcctgcgtcagggtatagaggctgtttcttgcctttttctca Mask Tandem Repeat Region ================================================ tgagaaaaaggcaagaaacagcctctataccctgacgcaggctatgggtcaaaggacgatgtagtcaaggaatgtggtatgattcctgttatctgtgagaaagactatcgaaatcatcttcttaccgacgatcagaagctgaacaaccacccaaagtccaagacaagatgtcgtgtggagcacatcttcggtttcatcgagggtttcatgaacggttcgtttgtctgcagcatcgtaatcgtccgtgccaagactgtaatggctttcatctgtctcatatacaacaaattcaaatatgtacagatcaataaataccagctgtagcttattgcctctaaggggtaactgtgtcttaacgtcaataaatcaagttaaatgagaggataaacgaacactatcgtgagtctgagatgccctttgaggagctgaatccaactgaactgactcagaaggaacggcttccacttacaaaaattcttttttagaacttatctaaaataatcagcagtttaatcttattctttttgtatggaattatattctacaaaattctgaattttaataatttaattgattcttttgccaaagtattgatagaatgtataagataaaaaatgtttattttgaacaataattccatttgatgcagcgtttctacataaagttgcatcatgcaagtaaaagcataaaaa Find is-nt database================================================ Query_seq: TF0175:TF0176|TF0175:TF0176:hypothetical protein:hypothetical protein:->->:185968..186659 692 tgagaaaaaggcaagaaacagcctctataccctgacgcaggctatgggtcaaaggacgatgtagtcaaggaatgtggtatgattcctgttatctgtgagaaagactatcgaaatcatcttcttaccgacgatcagaagctgaacaaccacccaaagtccaagacaagatgtcgtgtggagcacatcttcggtttcatcgagggtttcatgaacggttcgtttgtctgcagcatcgtaatcgtccgtgccaagactgtaatggctttcatctgtctcatatacaacaaattcaaatatgtacagatcaataaataccagctgtagcttattgcctctaaggggtaactgtgtcttaacgtcaataaatcaagttaaatgagaggataaacgaacactatcgtgagtctgagatgccctttgaggagctgaatccaactgaactgactcagaaggaacggcttccacttacaaaaattcttttttagaacttatctaaaataatcagcagtttaatcttattctttttgtatggaattatattctacaaaattctgaattttaataatttaattgattcttttgccaaagtattgatagaatgtataagataaaaaatgtttattttgaacaataattccatttgatgcagcgtttctacataaagttgcatcatgcaagtaaaagcataaaaa Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: TF0175:TF0176|TF0175:TF0176:hypothetical protein:hypothetical protein:->->:185968..186659 692 tgagaaaaaggcaagaaacagcctctataccctgacgcaggctatgggtcaaaggacgatgtagtcaaggaatgtggtatgattcctgttatctgtgagaaagactatcgaaatcatcttcttaccgacgatcagaagctgaacaaccacccaaagtccaagacaagatgtcgtgtggagcacatcttcggtttcatcgagggtttcatgaacggttcgtttgtctgcagcatcgtaatcgtccgtgccaagactgtaatggctttcatctgtctcatatacaacaaattcaaatatgtacagatcaataaataccagctgtagcttattgcctctaaggggtaactgtgtcttaacgtcaataaatcaagttaaatgagaggataaacgaacactatcgtgagtctgagatgccctttgaggagctgaatccaactgaactgactcagaaggaacggcttccacttacaaaaattcttttttagaacttatctaaaataatcagcagtttaatcttattctttttgtatggaattatattctacaaaattctgaattttaataatttaattgattcttttgccaaagtattgatagaatgtataagataaaaaatgtttattttgaacaataattccatttgatgcagcgtttctacataaagttgcatcatgcaagtaaaagcataaaaa Intra-Species Hit: Count: 0 Inter-species Hit: Count: 47 Min: 4 Max: 321 Len: 318 Subject: IS|IS1186.aa1 HSP 1 e-value: 2.0E-24 bit: 109.0 Len: 318 Query Start:4 Query End:321 Subject Strand: null Subject Start: 244 Subject End: 351 ... E K G K K Q P L Y P D A G Y G S K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I - - N K Y Q L ................................................................................................................................................................................................................................................................................................................................................................................... ... E S D K D K D L Y L D A G Y A G Q E S T V K E H G M N P I I C E K G R R N H P L T E K Q K A E N R R K S K T R C L V E H V F G F E E Q S M H G L I V R T I G I V R A K A N V A M T N L T Y N I F R Y I Q I V C N K R E L ................................................................................................................................................................................................................................................................................................................................................................................... Subject: IS|IS1168F.aa1 HSP 1 e-value: 2.0E-24 bit: 109.0 Len: 318 Query Start:4 Query End:321 Subject Strand: null Subject Start: 93 Subject End: 200 ... E K G K K Q P L Y P D A G Y G S K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I - - N K Y Q L ................................................................................................................................................................................................................................................................................................................................................................................... ... E S D K D K D L Y L D A G Y A G Q E S T V K E H G M N P I I C E K G R R N H P L T E K Q K A E N R R K S K T R C L V E H V F G F E E Q S M H G L I V R T I G I V R A K A N V A M T N L T Y N I F R Y I Q I V C N K R E L ................................................................................................................................................................................................................................................................................................................................................................................... Subject: IS|IS1168.aa1 HSP 1 e-value: 2.0E-24 bit: 109.0 Len: 318 Query Start:4 Query End:321 Subject Strand: null Subject Start: 244 Subject End: 351 ... E K G K K Q P L Y P D A G Y G S K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I - - N K Y Q L ................................................................................................................................................................................................................................................................................................................................................................................... ... E S D K D K D L Y L D A G Y A G Q E S T V K E H G M N P I I C E K G R R N H P L T E K Q K A E N R R K S K T R C L V E H V F G F E E Q S M H G L I V R T I G I V R A K A N V A M T N L T Y N I F R Y I Q I V C N K R E L ................................................................................................................................................................................................................................................................................................................................................................................... Subject: IS|IS1169.aa1 HSP 1 e-value: 8.0E-22 bit: 100.0 Len: 303 Query Start:4 Query End:306 Subject Strand: null Subject Start: 244 Subject End: 344 ... E K G K K Q P L Y P D A G Y G S K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I .................................................................................................................................................................................................................................................................................................................................................................................................. ... E K D E G K D L Y L D A G Y V G Q E E I V K Q H K M N P I I C E K G Y R N R P L T K E Q K S D N R K K S K T R C L V E H V F G F E E Q T M L G L V V R T V G L I R A K A N V A L T S L V Y N I S R Y T Q I .................................................................................................................................................................................................................................................................................................................................................................................................. Subject: gi|68549528|ref|ZP_00588991.1| Transposase, IS4 [Pelodictyon phaeoclathratiforme BU-1] HSP 1 e-value: 4.0E-17 bit: 85.1 Len: 294 Query Start:19 Query End:312 Subject Strand: null Subject Start: 254 Subject End: 351 .................. Q P L Y P D A G Y G S K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ .................. Q I L Y A D S A Y I G Q D E S I S W C G M S G Q I N E K G F K N H P L T D E Q K A S N R Q K S K T R A R V E H I F G F M T N S M D A M H V R T I G L F R A A A K I G L T N L T Y N M M R C V Q L K K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: UniRef90_Q3VN61 Cluster: Transposase, IS4; n=1; Pelodictyon phaeoclathratiforme BU-1|Rep: Transposase, IS4 - Pelodictyon phaeoclathratiforme BU-1 HSP 1 e-value: 4.0E-17 bit: 85.1 Len: 294 Query Start:19 Query End:312 Subject Strand: null Subject Start: 254 Subject End: 351 .................. Q P L Y P D A G Y G S K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ .................. Q I L Y A D S A Y I G Q D E S I S W C G M S G Q I N E K G F K N H P L T D E Q K A S N R Q K S K T R A R V E H I F G F M T N S M D A M H V R T I G L F R A A A K I G L T N L T Y N M M R C V Q L K K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|67939722|ref|ZP_00532213.1| Transposase, IS4 [Chlorobium phaeobacteroides BS1] HSP 1 e-value: 2.0E-16 bit: 82.4 Len: 294 Query Start:19 Query End:312 Subject Strand: null Subject Start: 243 Subject End: 340 .................. Q P L Y P D A G Y G S K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ .................. Q K L Y A D A A Y I G Q E E T I E S C G M R N M V H E K G N R Y H K L T D A Q K A S N K E K S R T R A R V E H V F G F M T N S M N A M Y I R T I G Y I R A T G K I G L A N L T Y N M M R C T Q L K K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: UniRef90_Q4AK22 Cluster: Transposase, IS4; n=2; Chlorobium phaeobacteroides BS1|Rep: Transposase, IS4 - Chlorobium phaeobacteroides BS1 HSP 1 e-value: 2.0E-16 bit: 82.4 Len: 294 Query Start:19 Query End:312 Subject Strand: null Subject Start: 243 Subject End: 340 .................. Q P L Y P D A G Y G S K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ .................. Q K L Y A D A A Y I G Q E E T I E S C G M R N M V H E K G N R Y H K L T D A Q K A S N K E K S R T R A R V E H V F G F M T N S M N A M Y I R T I G Y I R A T G K I G L A N L T Y N M M R C T Q L K K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|67919189|ref|ZP_00512774.1| Transposase, IS4 [Chlorobium limicola DSM 245] HSP 1 e-value: 3.0E-15 bit: 79.0 Len: 294 Query Start:19 Query End:312 Subject Strand: null Subject Start: 243 Subject End: 340 .................. Q P L Y P D A G Y G S K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ .................. Q K L Y G D A A Y I G Q E E S I E A C G M Q S E I H E K A T R N H K L T A D Q K A K N R Q K S K V R S R V E H V F G F M T N T L K A M T I K T I G Y V R A T A K I G L A N L T Y N L M R C V Q L K K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: UniRef90_Q44NC7 Cluster: Transposase, IS4; n=1; Chlorobium limicola DSM 245|Rep: Transposase, IS4 - Chlorobium limicola DSM 245 HSP 1 e-value: 3.0E-15 bit: 79.0 Len: 294 Query Start:19 Query End:312 Subject Strand: null Subject Start: 243 Subject End: 340 .................. Q P L Y P D A G Y G S K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ .................. Q K L Y G D A A Y I G Q E E S I E A C G M Q S E I H E K A T R N H K L T A D Q K A K N R Q K S K V R S R V E H V F G F M T N T L K A M T I K T I G Y V R A T A K I G L A N L T Y N L M R C V Q L K K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|67938675|ref|ZP_00531197.1| Transposase, IS4 [Chlorobium phaeobacteroides BS1] HSP 1 e-value: 1.0E-14 bit: 76.6 Len: 294 Query Start:19 Query End:312 Subject Strand: null Subject Start: 243 Subject End: 340 .................. Q P L Y P D A G Y G S K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ .................. Q K L Y A D A A Y I G Q E E T I E S S G M R N M V H E K G N R Y H K L T D A Q K A S N K E K S R T R A R V E H V F G F M T N S M N A M S I R T I G Y I R A T G K I G L A N L T Y N M M R C T Q L K K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|67937957|ref|ZP_00530487.1| Transposase, IS4 [Chlorobium phaeobacteroides BS1] HSP 1 e-value: 1.0E-12 bit: 70.1 Len: 294 Query Start:19 Query End:312 Subject Strand: null Subject Start: 243 Subject End: 340 .................. Q P L Y P D A G Y G S K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ .................. Q K L Y A D S A Y T G Q E K S I E G C G M A N E V Q E K G S R Y R A L T E T Q K A S N R E K A S H R A R V E H I F G Y L T N S M K A M Y I R T I G Y A R A T A K I G L T N L T Y N M M R C T Q L N K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|67939131|ref|ZP_00531642.1| Transposase, IS4 [Chlorobium phaeobacteroides BS1] HSP 1 e-value: 1.0E-12 bit: 70.1 Len: 294 Query Start:19 Query End:312 Subject Strand: null Subject Start: 243 Subject End: 340 .................. Q P L Y P D A G Y G S K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ .................. Q K L Y A D S A Y T G Q E K S I E G C G M A N E V Q E K G S R Y R A L T E T Q K A S N R E K A S H R A R V E H I F G Y L T N S M K A M Y I R T I G Y A R A T A K I G L T N L T Y N M M R C T Q L N K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: UniRef90_Q4ALP5 Cluster: Transposase, IS4; n=3; Chlorobium phaeobacteroides BS1|Rep: Transposase, IS4 - Chlorobium phaeobacteroides BS1 HSP 1 e-value: 1.0E-12 bit: 70.1 Len: 294 Query Start:19 Query End:312 Subject Strand: null Subject Start: 243 Subject End: 340 .................. Q P L Y P D A G Y G S K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ .................. Q K L Y A D S A Y T G Q E K S I E G C G M A N E V Q E K G S R Y R A L T E T Q K A S N R E K A S H R A R V E H I F G Y L T N S M K A M Y I R T I G Y A R A T A K I G L T N L T Y N M M R C T Q L N K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|116627963|ref|YP_820582.1| Transposase and inactivated derivatives, IS5 family [Streptococcus thermophilus LMD-9] HSP 1 e-value: 1.0E-11 bit: 66.6 Len: 303 Query Start:19 Query End:321 Subject Strand: null Subject Start: 233 Subject End: 330 .................. Q P L Y P D A G Y G S K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K Y Q L ................................................................................................................................................................................................................................................................................................................................................................................... .................. E P V F D D S A Y V G K S - V P D N C Q H H T V - - R R A F R N K P L T D T D K N I N R H I A K V R C R V E H V F G F I E N S M K G S T F R G I G M D R A K T N V T L T N L L Y N I F R F E Q I K R L G L ................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q70C57 Cluster: IS1198 transposase; n=2; Streptococcus thermophilus|Rep: IS1198 transposase - Streptococcus thermophilus HSP 1 e-value: 1.0E-11 bit: 66.6 Len: 303 Query Start:19 Query End:321 Subject Strand: null Subject Start: 233 Subject End: 330 .................. Q P L Y P D A G Y G S K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K Y Q L ................................................................................................................................................................................................................................................................................................................................................................................... .................. E P V F D D S A Y V G K S - V P D N C Q H H T V - - R R A F R N K P L T D T D K N I N R H I A K V R C R V E H V F G F I E N S M K G S T F R G I G M D R A K T N V T L T N L L Y N I F R F E Q I K R L G L ................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|67940233|ref|ZP_00532686.1| Transposase, IS4 [Chlorobium phaeobacteroides BS1] HSP 1 e-value: 4.0E-11 bit: 65.1 Len: 276 Query Start:19 Query End:294 Subject Strand: null Subject Start: 46 Subject End: 137 .................. Q P L Y P D A G Y G S K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K .............................................................................................................................................................................................................................................................................................................................................................................................................. .................. Q K L Y A D S A Y T G Q E E S I E G C G M A N E V Q E K G S R Y R A L T E T Q K A S N R E K A S H R A R V E H I F G Y L T N S M K A M Y I R T I G Y A R A T A K I G L T N L T Y N M M R .............................................................................................................................................................................................................................................................................................................................................................................................................. Subject: gi|81096087|ref|ZP_00874437.1| Transposase, IS4 [Streptococcus suis 89/1591] HSP 1 e-value: 1.0E-9 bit: 60.1 Len: 216 Query Start:106 Query End:321 Subject Strand: null Subject Start: 259 Subject End: 330 ......................................................................................................... Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K Y Q L ................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................... F R N K P L T E T D K V I N R H I A K V R C R V E H V F G F I E M S M K G S S C R S I G K A R A K T N V T L T N L L Y N I C R F E Q I K R L G L ................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q303W7 Cluster: Transposase, IS4; n=2; Streptococcus suis 89/1591|Rep: Transposase, IS4 - Streptococcus suis 89/1591 HSP 1 e-value: 1.0E-9 bit: 60.1 Len: 216 Query Start:106 Query End:321 Subject Strand: null Subject Start: 259 Subject End: 330 ......................................................................................................... Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K Y Q L ................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................... F R N K P L T E T D K V I N R H I A K V R C R V E H V F G F I E M S M K G S S C R S I G K A R A K T N V T L T N L L Y N I C R F E Q I K R L G L ................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|81176979|ref|ZP_00875901.1| Transposase, IS4 [Streptococcus suis 89/1591] HSP 1 e-value: 2.0E-8 bit: 55.8 Len: 216 Query Start:106 Query End:321 Subject Strand: null Subject Start: 73 Subject End: 144 ......................................................................................................... Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K Y Q L ................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................... F R N K P L T E T D K V I N R H I T K V R C R V E H G F G F I E T N M K G N I C R A I G K A R A K T N V T L T N L L Y N I C R F E Q I K R L G L ................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|121543238|ref|ZP_01674928.1| transposase (class II) [Candidatus Desulfococcus oleovorans Hxd3] HSP 1 e-value: 2.0E-8 bit: 55.8 Len: 318 Query Start:4 Query End:321 Subject Strand: null Subject Start: 232 Subject End: 333 ... E K G K K Q P L Y P D A G Y G S K D D V - - V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C - S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K Y Q L ................................................................................................................................................................................................................................................................................................................................................................................... ... E S N S S R D V Y A D S A Y R S E E S V K R L K E E G F R E H L Q R K G C R H R K L T K R E Q R G N H T R A K T R S R V E H V F G - V Q A M M A G E M I L R T I G I V R A R A K I G L R N L A Y N - - - - - - I N R Y S I ................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_A1IER7 Cluster: Transposase; n=2; Candidatus Desulfococcus oleovorans Hxd3|Rep: Transposase - Candidatus Desulfococcus oleovorans Hxd3 HSP 1 e-value: 2.0E-8 bit: 55.8 Len: 318 Query Start:4 Query End:321 Subject Strand: null Subject Start: 232 Subject End: 333 ... E K G K K Q P L Y P D A G Y G S K D D V - - V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C - S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K Y Q L ................................................................................................................................................................................................................................................................................................................................................................................... ... E S N S S R D V Y A D S A Y R S E E S V K R L K E E G F R E H L Q R K G C R H R K L T K R E Q R G N H T R A K T R S R V E H V F G - V Q A M M A G E M I L R T I G I V R A R A K I G L R N L A Y N - - - - - - I N R Y S I ................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q2ZYI2 Cluster: Transposase, IS4; n=1; Streptococcus suis 89/1591|Rep: Transposase, IS4 - Streptococcus suis 89/1591 HSP 1 e-value: 2.0E-8 bit: 55.8 Len: 216 Query Start:106 Query End:321 Subject Strand: null Subject Start: 73 Subject End: 144 ......................................................................................................... Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K Y Q L ................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................... F R N K P L T E T D K V I N R H I T K V R C R V E H G F G F I E T N M K G N I C R A I G K A R A K T N V T L T N L L Y N I C R F E Q I K R L G L ................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|58616317|ref|YP_195447.1| transposase [Azoarcus sp. EbN1] HSP 1 e-value: 9.0E-8 bit: 53.9 Len: 288 Query Start:25 Query End:312 Subject Strand: null Subject Start: 178 Subject End: 274 ........................ L Y P D A G Y G S K - - D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ ........................ V Y A D R G Y T S K G R E D W L K D K G Y R N Q I Q R K G T R N K P L S E C Q Q G R N H R I A K T R A R V E H V F A A I D Q - M G G K M V R T I G Q A R A N F T M T M M A A C Y N L K R L V Y F Q K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: UniRef90_Q5NWZ1 Cluster: Transposase; n=1; Azoarcus sp. EbN1|Rep: Transposase - Azoarcus sp. (strain EbN1) HSP 1 e-value: 9.0E-8 bit: 53.9 Len: 288 Query Start:25 Query End:312 Subject Strand: null Subject Start: 178 Subject End: 274 ........................ L Y P D A G Y G S K - - D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ ........................ V Y A D R G Y T S K G R E D W L K D K G Y R N Q I Q R K G T R N K P L S E C Q Q G R N H R I A K T R A R V E H V F A A I D Q - M G G K M V R T I G Q A R A N F T M T M M A A C Y N L K R L V Y F Q K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|87302394|ref|ZP_01085219.1| Transposase (class II) [Synechococcus sp. WH 5701] HSP 1 e-value: 1.0E-7 bit: 53.5 Len: 285 Query Start:25 Query End:309 Subject Strand: null Subject Start: 241 Subject End: 337 ........................ L Y P D A G Y G S K - - D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N ............................................................................................................................................................................................................................................................................................................................................................................................... ........................ V W A D S G Y A G A Q F E D L L D L G G F E S R I H E K G S R C H L L S E E A K E R N K V R S T V R A R V E H V F G A I T T C M R G K L T R R I G L A R T K A W W G L R N L T Y N F L R Y L H C N ............................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|18150915|ref|NP_542852.1| putative IS1246 transposase [Pseudomonas putida] HSP 1 e-value: 3.0E-7 bit: 52.4 Len: 288 Query Start:25 Query End:312 Subject Strand: null Subject Start: 178 Subject End: 274 ........................ L Y P D A G Y G S K D D V - - V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ ........................ V Y A D R G H T S A D R E G W L K D H G Y R N Q I Q R K G Y R N K P L S E C Q Q R R N H R I A K T R A R V E H V F A S I E Q - M G G K L I R T I G Q G R A N F A M T M M A A C Y N L K R L V Y F Q K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|26989690|ref|NP_745115.1| IS1246 transposase [Pseudomonas putida KT2440] HSP 1 e-value: 3.0E-7 bit: 52.4 Len: 288 Query Start:25 Query End:312 Subject Strand: null Subject Start: 178 Subject End: 274 ........................ L Y P D A G Y G S K D D V - - V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ ........................ V Y A D R G H T S A D R E G W L K D H G Y R N Q I Q R K G Y R N K P L S E C Q Q R R N H R I A K T R A R V E H V F A S I E Q - M G G K L I R T I G Q G R A N F A M T M M A A C Y N L K R L V Y F Q K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: UniRef90_Q8GP38 Cluster: Tnp-IS1194; n=4; Streptococcus thermophilus|Rep: Tnp-IS1194 - Streptococcus thermophilus HSP 1 e-value: 3.0E-7 bit: 52.4 Len: 228 Query Start:94 Query End:321 Subject Strand: null Subject Start: 253 Subject End: 328 ............................................................................................. C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K Y Q L ................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................. C L K N T R S K S L K A D D K M F N K I I S K I R V R I E H V F G F F E N S M H G S S L R S I G F D R A V L N T D L T N L T Y N L L R Y E Q V K R L N L ................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q57143 Cluster: Hypothetical protein; n=3; Pseudomonas putida|Rep: Hypothetical protein - Pseudomonas putida HSP 1 e-value: 3.0E-7 bit: 52.4 Len: 288 Query Start:25 Query End:312 Subject Strand: null Subject Start: 178 Subject End: 274 ........................ L Y P D A G Y G S K D D V - - V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ ........................ V Y A D R G H T S A D R E G W L K D H G Y R N Q I Q R K G Y R N K P L S E C Q Q R R N H R I A K T R A R V E H V F A S I E Q - M G G K L I R T I G Q G R A N F A M T M M A A C Y N L K R L V Y F Q K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|87301037|ref|ZP_01083878.1| Transposase (class II) [Synechococcus sp. WH 5701] HSP 1 e-value: 8.0E-7 bit: 50.8 Len: 285 Query Start:25 Query End:309 Subject Strand: null Subject Start: 241 Subject End: 337 ........................ L Y P D A G Y G S K - - D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N ............................................................................................................................................................................................................................................................................................................................................................................................... ........................ V W A D S G Y A G A Q F E D L L D L G G F E S R I H E K G S R C H P L S E E A K E R N K V R S T V R A R V E H V F G A I T T C M R G K L T R R I G L A R T K A W W G L R N L T Y N F L R Y L H C N ............................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|87301323|ref|ZP_01084164.1| Transposase (class II) [Synechococcus sp. WH 5701] HSP 1 e-value: 8.0E-7 bit: 50.8 Len: 285 Query Start:25 Query End:309 Subject Strand: null Subject Start: 241 Subject End: 337 ........................ L Y P D A G Y G S K - - D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N ............................................................................................................................................................................................................................................................................................................................................................................................... ........................ V W A D S G Y A G A Q F E D L L D L G G F E S R I H E K G S R C H P L S E E A K E R N K V R S T V R A R V E H V F G A I T T C M R G K L T R R I G L A R T K A W W G L R N L T Y N F L R Y L H C N ............................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|87301716|ref|ZP_01084556.1| Transposase (class II) [Synechococcus sp. WH 5701] HSP 1 e-value: 8.0E-7 bit: 50.8 Len: 285 Query Start:25 Query End:309 Subject Strand: null Subject Start: 241 Subject End: 337 ........................ L Y P D A G Y G S K - - D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N ............................................................................................................................................................................................................................................................................................................................................................................................... ........................ V W A D S G Y A G A Q F E D L L D L G G F E S R I H E K G S R C H P L S E E A K E R N K V R S T V R A R V E H V F G A I T T C M R G K L T R R I G L A R T K A W W G L R N L T Y N F L R Y L H C N ............................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|87302032|ref|ZP_01084866.1| Transposase (class II) [Synechococcus sp. WH 5701] HSP 1 e-value: 8.0E-7 bit: 50.8 Len: 285 Query Start:25 Query End:309 Subject Strand: null Subject Start: 241 Subject End: 337 ........................ L Y P D A G Y G S K - - D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N ............................................................................................................................................................................................................................................................................................................................................................................................... ........................ V W A D S G Y A G A Q F E D L L D L G G F E S R I H E K G S R C H P L S E E A K E R N K V R S T V R A R V E H V F G A I T T C M R G K L T R R I G L A R T K A W W G L R N L T Y N F L R Y L H C N ............................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|87302240|ref|ZP_01085065.1| Transposase (class II) [Synechococcus sp. WH 5701] HSP 1 e-value: 8.0E-7 bit: 50.8 Len: 285 Query Start:25 Query End:309 Subject Strand: null Subject Start: 241 Subject End: 337 ........................ L Y P D A G Y G S K - - D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N ............................................................................................................................................................................................................................................................................................................................................................................................... ........................ V W A D S G Y A G A Q F E D L L D L G G F E S R I H E K G S R C H P L S E E A K E R N K V R S T V R A R V E H V F G A I T T C M R G K L T R R I G L A R T K A W W G L R N L T Y N F L R Y L H C N ............................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|87302244|ref|ZP_01085069.1| Transposase (class II) [Synechococcus sp. WH 5701] HSP 1 e-value: 8.0E-7 bit: 50.8 Len: 285 Query Start:25 Query End:309 Subject Strand: null Subject Start: 241 Subject End: 337 ........................ L Y P D A G Y G S K - - D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N ............................................................................................................................................................................................................................................................................................................................................................................................... ........................ V W A D S G Y A G A Q F E D L L D L G G F E S R I H E K G S R C H P L S E E A K E R N K V R S T V R A R V E H V F G A I T T C M R G K L T R R I G L A R T K A W W G L R N L T Y N F L R Y L H C N ............................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|87302424|ref|ZP_01085241.1| Transposase (class II) [Synechococcus sp. WH 5701] HSP 1 e-value: 8.0E-7 bit: 50.8 Len: 285 Query Start:25 Query End:309 Subject Strand: null Subject Start: 241 Subject End: 337 ........................ L Y P D A G Y G S K - - D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N ............................................................................................................................................................................................................................................................................................................................................................................................... ........................ V W A D S G Y A G A Q F E D L L D L G G F E S R I H E K G S R C H P L S E E A K E R N K V R S T V R A R V E H V F G A I T T C M R G K L T R R I G L A R T K A W W G L R N L T Y N F L R Y L H C N ............................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|87303258|ref|ZP_01086051.1| Transposase (class II) [Synechococcus sp. WH 5701] HSP 1 e-value: 8.0E-7 bit: 50.8 Len: 285 Query Start:25 Query End:309 Subject Strand: null Subject Start: 241 Subject End: 337 ........................ L Y P D A G Y G S K - - D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N ............................................................................................................................................................................................................................................................................................................................................................................................... ........................ V W A D S G Y A G A Q F E D L L D L G G F E S R I H E K G S R C H P L S E E A K E R N K V R S T V R A R V E H V F G A I T T C M R G K L T R R I G L A R T K A W W G L R N L T Y N F L R Y L H C N ............................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_UPI0000698385 Cluster: Transposase (class II); n=3; Synechococcus sp. WH 5701|Rep: Transposase (class II) - Synechococcus sp. WH 5701 HSP 1 e-value: 8.0E-7 bit: 50.8 Len: 285 Query Start:25 Query End:309 Subject Strand: null Subject Start: 241 Subject End: 337 ........................ L Y P D A G Y G S K - - D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N ............................................................................................................................................................................................................................................................................................................................................................................................... ........................ V W A D S G Y A G A Q F E D L L D L G G F E S R I H E K G S R C H P L S E E A K E R N K V R S T V R A R V E H V F G A I T T C M R G K L T R R I G L A R T K A W W G L R N L T Y N F L R Y L H C N ............................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|56475579|ref|YP_157168.1| transposase, IS5 family [Azoarcus sp. EbN1] HSP 1 e-value: 1.0E-6 bit: 50.1 Len: 306 Query Start:7 Query End:312 Subject Strand: null Subject Start: 191 Subject End: 293 ...... K G K K Q P L Y P D A G Y G S - - K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ ...... R N T S R D V Y A D R G Y P S E Q R E A W L K E N G F R N R I Q R K G K R N K P L S E C Q Q R R N K R I A K T R A R V E H V F G A I E Q - M G G K L L R T I G Q E R A N F A M T M M A A C Y N L K R L V Y F R K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|56476289|ref|YP_157878.1| transposase, IS5 family [Azoarcus sp. EbN1] HSP 1 e-value: 1.0E-6 bit: 50.1 Len: 306 Query Start:7 Query End:312 Subject Strand: null Subject Start: 237 Subject End: 339 ...... K G K K Q P L Y P D A G Y G S - - K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ ...... R N T S R D V Y A D R G Y P S E Q R E A W L K E N G F R N R I Q R K G K R N K P L S E C Q Q R R N K R I A K T R A R V E H V F G A I E Q - M G G K L L R T I G Q E R A N F A M T M M A A C Y N L K R L V Y F R K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|56477239|ref|YP_158828.1| transposase, IS5 family [Azoarcus sp. EbN1] HSP 1 e-value: 1.0E-6 bit: 50.1 Len: 306 Query Start:7 Query End:312 Subject Strand: null Subject Start: 191 Subject End: 293 ...... K G K K Q P L Y P D A G Y G S - - K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ ...... R N T S R D V Y A D R G Y P S E Q R E A W L K E N G F R N R I Q R K G K R N K P L S E C Q Q R R N K R I A K T R A R V E H V F G A I E Q - M G G K L L R T I G Q E R A N F A M T M M A A C Y N L K R L V Y F R K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|56477254|ref|YP_158843.1| transposase, IS5 family [Azoarcus sp. EbN1] HSP 1 e-value: 1.0E-6 bit: 50.1 Len: 306 Query Start:7 Query End:312 Subject Strand: null Subject Start: 191 Subject End: 293 ...... K G K K Q P L Y P D A G Y G S - - K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ ...... R N T S R D V Y A D R G Y P S E Q R E A W L K E N G F R N R I Q R K G K R N K P L S E C Q Q R R N K R I A K T R A R V E H V F G A I E Q - M G G K L L R T I G Q E R A N F A M T M M A A C Y N L K R L V Y F R K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|56477262|ref|YP_158851.1| transposase, IS5 family [Azoarcus sp. EbN1] HSP 1 e-value: 1.0E-6 bit: 50.1 Len: 306 Query Start:7 Query End:312 Subject Strand: null Subject Start: 237 Subject End: 339 ...... K G K K Q P L Y P D A G Y G S - - K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ ...... R N T S R D V Y A D R G Y P S E Q R E A W L K E N G F R N R I Q R K G K R N K P L S E C Q Q R R N K R I A K T R A R V E H V F G A I E Q - M G G K L L R T I G Q E R A N F A M T M M A A C Y N L K R L V Y F R K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: UniRef90_Q5P413 Cluster: Transposase, IS5 family; n=3; Azoarcus sp. EbN1|Rep: Transposase, IS5 family - Azoarcus sp. (strain EbN1) HSP 1 e-value: 1.0E-6 bit: 50.1 Len: 306 Query Start:7 Query End:312 Subject Strand: null Subject Start: 237 Subject End: 339 ...... K G K K Q P L Y P D A G Y G S - - K D D V V K E C G M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ ...... R N T S R D V Y A D R G Y P S E Q R E A W L K E N G F R N R I Q R K G K R N K P L S E C Q Q R R N K R I A K T R A R V E H V F G A I E Q - M G G K L L R T I G Q E R A N F A M T M M A A C Y N L K R L V Y F R K ............................................................................................................................................................................................................................................................................................................................................................................................ Subject: IS|IS1194.aa1 HSP 1 e-value: 2.0E-6 bit: 49.7 Len: 228 Query Start:94 Query End:321 Subject Strand: null Subject Start: 253 Subject End: 328 ............................................................................................. C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K Y Q L ................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................. C L K N T H S K S L K A D D K M F N K I I S K I R V R I E H V F G F V E N S M H G S S L R S I G F D R A V L N T D L T N L T Y N L L R H E Q V K R L N L ................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q7X0F4 Cluster: Putative transposase; n=1; Paracoccus solventivorans|Rep: Putative transposase - Paracoccus solventivorans HSP 1 e-value: 6.0E-6 bit: 47.8 Len: 222 Query Start:91 Query End:312 Subject Strand: null Subject Start: 268 Subject End: 341 .......................................................................................... I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V M A F I C L I Y N K F K Y V Q I N K ............................................................................................................................................................................................................................................................................................................................................................................................ .......................................................................................... I H R K G K R G K P L T E Q A K S S N R T K S S V R A R V E H V F G A Q A N D M G G T L V R T I G M V R A K A K I G M K N L A Y N M R R L G Q L S R ............................................................................................................................................................................................................................................................................................................................................................................................ Find nr database================================================ Query_seq: TF0175:TF0176|TF0175:TF0176:hypothetical protein:hypothetical protein:->->:185968..186659 692 tgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcttattgcctctaaggggtaactgtgtcttaacgtcaataaatcaagttaaatgagaggataaacgaacactatcgtgagtctgagatgccctttgaggagctgaatccaactgaactgactcagaaggaacggcttccacttacaaaaattcttttttagaacttatctaaaataatcagcagtttaatcttattctttttgtatggaattatattctacaaaattctgaattttaataatttaattgattcttttgccaaagtattgatagaatgtataagataaaaaatgtttattttgaacaataattccatttgatgcagcgtttctacataaagttgcatcatgcaagtaaaagcataaaaa Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 tgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcttattgcctctaaggggtaactgtgtcttaacgtcaataaatcaagttaaatgagaggataaacgaacactatcgtgagtctgagatgccctttgaggagctgaatccaactgaactgactcagaaggaacggcttccacttacaaaaattcttttttagaacttatctaaaataatcagcagtttaatcttattctttttgtatggaattatattctacaaaattctgaattttaataatttaattgattcttttgccaaagtattgatagaatgtataagataaaaaatgtttattttgaacaataattccatttgatgcagcgtttctacataaagttgcatcatgcaagtaaaagcataaaaa Predict ORF larger than 30AA ================================================ Protein_Len: 47 Strand: + Start: 168 End: 308 ....................................................................................................................................................................... M S C G A H L R F H R G F H E R F V C L Q H R N R P C Q D C N G F H L S H I Q Q I Q I C T D Q ................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 60 Strand: + Start: 79 End: 321 .............................................................................. M I P V I C E K D Y R N H L L T D D Q K L N N H P K S K T R C R V E H I F G F I E G F M N G S F V C S I V I V R A K T V ................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 39 Strand: + Start: 366 End: 482 ............................................................................................................................................................................................................................................................................................................................................................................. M K L N E R I N E H Y R E S E M P F E E L N P T E L T Q K E R L P L T K I L F .................................................................................................................................................................................................................. Protein_Len: 37 Strand: + Start: 498 End: 608 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M I S S L I L F F L Y G I I F Y K I L N F N N L I D S F A K V L I E C I R .................................................................................... Protein_Len: 36 Strand: - Start: 570 End: 677 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... N I R K G F Y Q Y F T Y S L F H K N Q V I I G N S A A N R C L T A D H M ............... Protein_Len: 43 Strand: - Start: 545 End: 673 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ L I R F K L L K I S E K A L T N I S H I L Y F I N I K F L L E M Q H L T E V Y L Q M M ................... Protein_Len: 32 Strand: - Start: 370 End: 465 ................................................................................................................................................................................................................................................................................................................................................................................. T L H S S L R V S D H T Q S A R Q P A S D L Q V S E S P V A E M ................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 135 End: 362 ...................................................................................................................................... M K P K M S P K M F P E N T Q L M T I T R A L V T I A K M Q R M Y L L N L Y T C I L L Y W S Y S I A E L P Y S H R L T M .......................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 52 End: 363 ................................................... D E T E D L T E H V T R K D A A D Y D D T G L S Y H S E D T E Y V V F E F I Y L D I F V L Q L K N G R L P L Q T K V D M ......................................................................................................................................................................................................................................................................................................................................... tgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcttattgcctctaaggggtaactgtgtcttaacgtcaataaatcaagttaaatgagaggataaacgaacactatcgtgagtctgagatgccctttgaggagctgaatccaactgaactgactcagaaggaacggcttccacttacaaaaattcttttttagaacttatctaaaataatcagcagtttaatcttattctttttgtatggaattatattctacaaaattctgaattttaataatttaattgattcttttgccaaagtattgatagaatgtataagataaaaaatgtttattttgaacaataattccatttgatgcagcgtttctacataaagttgcatcatgcaagtaaaagcataaaaa Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: - Score: 83 Start: 534 End: 563 .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAATTCAGAATTTTGTAGAATATAAT................................................................................................................................. Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ tgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcttattgcctctaaggggtaactgtgtcttaacgtcaataaatcaagttaaatgagaggataaacgaacactatcgtgagtctgagatgccctttgaggagctgaatccaactgaactgactcagaaggaacggcttccacttacaaaaattcttttttagaacttatctaaaataatcagcagtttaatcttattctttttgtatggaattatattctacaaaattctgaattttaataatttaattgattcttttgccaaagtattgatagaatgtataagataaaaaatgtttattttgaacaataattccatttgatgcagcgtttctacataaagttgcatcatgcaagtaaaagcataaaaa Predict TransTerm conf > 70================================================ Find igs database================================================ Query_seq: TF0175:TF0176|TF0175:TF0176:hypothetical protein:hypothetical protein:->->:185968..186659 692 tgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcttattgcctctaaggggtaactgtgtcttaacgtcaataaatcaagttaaatgagaggataaacgaacactatcgtgagtctgagatgccctttgaggagctgaatccaactgaactgactcagaaggaacggcttccacttacaaaaattcttttttagaacttatctaaaataatcagcagtttaatcttattctttttgtatggaattatattctacaaaattctgaattttaataatttaattgattcttttgccaaagtattgatagaatgtataagataaaaaatgtttattttgaacaataattccatttgatgcagcgtttctacataaagttgcatcatgcaagtaaaagcataaaaa Intra-Species Hit: Count: 1 Min: 322 Max: 692 Len: 371 Subject: tfor_TF0175_TF0176|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[185968,186659]|692 HSP 1 e-value: 0.0 bit: 735.0 Len: 371 Query Start:322 Query End:692 Subject Strand: POSITIVE Subject Start: 322 Subject End: 692 .................................................................................................................................................................................................................................................................................................................................tagcttattgcctctaaggggtaactgtgtcttaacgtcaataaatcaagttaaatgagaggataaacgaacactatcgtgagtctgagatgccctttgaggagctgaatccaactgaactgactcagaaggaacggcttccacttacaaaaattcttttttagaacttatctaaaataatcagcagtttaatcttattctttttgtatggaattatattctacaaaattctgaattttaataatttaattgattcttttgccaaagtattgatagaatgtataagataaaaaatgtttattttgaacaataattccatttgatgcagcgtttctacataaagttgcatcatgcaagtaaaagcataaaaa .................................................................................................................................................................................................................................................................................................................................tagcttattgcctctaaggggtaactgtgtcttaacgtcaataaatcaagttaaatgagaggataaacgaacactatcgtgagtctgagatgccctttgaggagctgaatccaactgaactgactcagaaggaacggcttccacttacaaaaattcttttttagaacttatctaaaataatcagcagtttaatcttattctttttgtatggaattatattctacaaaattctgaattttaataatttaattgattcttttgccaaagtattgatagaatgtataagataaaaaatgtttattttgaacaataattccatttgatgcagcgtttctacataaagttgcatcatgcaagtaaaagcataaaaa Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAGCUUAUUGCCUCUAAGGGGUAACUGUGUCUUAACGUCAAUAAAUCAAGUUAAAUGAGAGGAUAAACGAACACUAUCGUGAGUCUGAGAUGCCCUUUGAGGAGCUGAAUCCAACUGAACUGACUCAGAAGGAACGGCUUCCACUUACAAAAAUUCUUUUUUAGAACUUAUCUAAAAUAAUCAGCAGUUUAAUCUUAUUCUUUUUGUAUGGAAUUAUAUUCUACAAAAUUCUGAAUUUUAAUAAUUUAAUUGAUUCUUUUGCCAAAGUAUUGAUAGAAUGUAUAAGAUAAAAAAUGUUUAUUUUGAACAAUAAUUCCAUUUGAUGCAGCGUUUCUACAUAAAGUUGCAUCAUGCAAGUAAAAGCAUAAAAA ..((((....((((.((((((((.((.....(((((.............)))))......((((..((((......))))..)))).)).)))))))))))).(((((.(((..((((......))))..))).........................(((((((.....)))))))...))))).................(((((.(((((((((.((((((((......(((((((((....))))..)))))...(((....)))))).))))).((.(((((((((.....))))))))).)).)))))))))..(((((((((.............))))))))).)))))...))))....... (-79.54) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UUUUUAUGCUUUUACUUGCAUGAUGCAACUUUAUGUAGAAACGCUGCAUCAAAUGGAAUUAUUGUUCAAAAUAAACAUUUUUUAUCUUAUACAUUCUAUCAAUACUUUGGCAAAAGAAUCAAUUAAAUUAUUAAAAUUCAGAAUUUUGUAGAAUAUAAUUCCAUACAAAAAGAAUAAGAUUAAACUGCUGAUUAUUUUAGAUAAGUUCUAAAAAAGAAUUUUUGUAAGUGGAAGCCGUUCCUUCUGAGUCAGUUCAGUUGGAUUCAGCUCCUCAAAGGGCAUCUCAGACUCACGAUAGUGUUCGUUUAUCCUCUCAUUUAACUUGAUUUAUUGACGUUAAGACACAGUUACCCCUUAGAGGCAAUAAGCUA .......((((((((((((((((((((.((((......))).).)))))))..((((((..((((..(((((((.((..(((.(((((((..(((((.((((....))))....)))))........................(((((((((((...))))..)))))))...))))))).)))....)).)))))))..))))))))))............)))))))))))))...(((..(((((....)))))..)))...((((((((.(((((......((((.(((....)))...))))..............((((((........))))))..........))))).)))).....)))). (-74.10) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 334 107 65 228 191 tfor:TF0418|5end_possible_methyl-accepting_chemotaxis_protein_434836..435066_POSITIVE 334 107 65 192 155 tfor:TF0027|5end_conserved_hypothetical_protein_22866..23096_POSITIVE 325 116 71 86 43 tfor:TF2512|5end_possible_abortive_infection_protein_2690247..2690477_POSITIVE 316 117 75 167 111 tfor:TF2037|5end_conserved_hypothetical_protein;_possible_anaerobic_ribonucleoside-triphosphate_reductase_2196754..2196984_POSITIVE 306 107 71 141 101 tfor:TF1253|5end_hypothetical_protein_1335982..1336212_POSITIVE 301 129 81 222 169 tfor:TF0786|5end_pyridoxal_phosphate_biosynthetic_protein_838563..838793_POSITIVE 294 138 93 63 18 tfor:TF2603|5end_transcriptional_regulator,_AraC_family_2776578..2776808_POSITIVE 294 129 82 183 127 tfor:TF1551|5end_hypothetical_protein_1656864..1657094_POSITIVE 291 356 312 231 190 tfor:TF0305|5end_peptidyl-prolyl_cis-trans_isomerase_330280..330510_POSITIVE 290 126 85 162 114 tfor:TF0142|5end_subtilisin-like_serine_proteinase_149740..149970_POSITIVE 289 358 319 84 41 tfor:TF2876|5end_cytosine_deaminase_3065144..3065374_POSITIVE 284 107 67 170 123 tfor:TF1380|5end_signal_peptidase_I_1456721..1456951_POSITIVE 282 118 78 223 187 tfor:TF2437|5end_elongation_factor_P_2615104..2615334_POSITIVE 279 117 77 58 18 tfor:TF2035|5end_conserved_hypothetical_protein_2194665..2194895_POSITIVE 278 138 91 50 4 tfor:TF2304|5end_OmpA_family_protein_2459320..2459550_POSITIVE 278 47 2 60 15 tfor:TF0218|5end_translation_initiation_factor_3_(IF-3)_243182..243412_POSITIVE 276 119 78 151 101 tfor:TF1586|5end_hypothetical_protein_1690971..1691201_POSITIVE 275 130 82 160 114 tfor:TF3088|5end_conserved_hypothetical_protein_3322512..3322742_POSITIVE 275 126 82 49 5 tfor:TF1150|5end_pyruvate-formate_lyase_1230164..1230394_POSITIVE 275 138 92 203 159 tfor:TF0474|5end_outer_membrane_efflux_protein_492104..492334_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 296 108 67 39 1 tfor:TF1693|3end_conserved_hypothetical_protein;_possible_thiopurine_S-methyltransferase_(TPMT)_family_protein_1812372..1812522_POSITIVE 290 37 3 139 99 tfor:TF0925|3end_hypothetical_protein_962127..962277_POSITIVE 289 358 319 84 41 tfor:TF2874|3end_conserved_hypothetical_protein_3065224..3065374_POSITIVE 281 138 97 151 110 tfor:TF0869|3end_conserved_hypothetical_protein;_possible_transcriptional_regulator_922014..922164_POSITIVE 279 117 77 51 11 tfor:TF2034|3end_arabinose-proton_symporter_2194738..2194888_POSITIVE 275 130 82 150 104 tfor:TF3087|3end_conserved_hypothetical_protein_3322582..3322732_POSITIVE 275 124 82 135 86 tfor:TF0128|3end_hypothetical_protein_140556..140706_POSITIVE 272 126 83 55 11 tfor:TF0612|3end_conserved_hypothetical_protein_646137..646287_POSITIVE 271 138 98 54 14 tfor:TF0879|3end_TraG_family_protein_934085..934235_POSITIVE 268 140 91 65 10 tfor:TF2721|3end_conserved_hypothetical_protein_2896956..2897106_POSITIVE 265 149 104 58 13 tfor:TF1931|3end_ATPase/GTPase_2078622..2078772_POSITIVE 265 95 55 73 29 tfor:TF0545|3end_glucose-inhibited_division_protein_B_576453..576603_POSITIVE 264 127 86 74 31 tfor:TF2774|3end_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_pyrophosphokinase_2959719..2959869_POSITIVE 264 196 157 38 6 tfor:TF1722|3end_conserved_hypothetical_protein_1848471..1848621_POSITIVE 264 106 67 56 17 tfor:TF0609|3end_conserved_hypothetical_protein_642813..642963_POSITIVE 262 138 91 60 18 tfor:TF1332|3end_cytochrome_c-type_synthesis_protein_(cytochrome_c_biogenesis_protein);_ABC_transporter,_permease_1413484..1413634_POSITIVE 261 95 58 124 90 tfor:TF3006|3end_response_regulator,_transcriptional_regulator_RprY_3227162..3227312_POSITIVE 259 128 82 141 100 tfor:TF0037|3end_sialic_acid-specific_9-O-acetylesterase_39991..40141_POSITIVE 258 109 61 135 97 tfor:TF2128|3end_3-oxoacyl-(acyl-carrier_protein)_synthase_2305534..2305684_POSITIVE 256 123 81 53 1 tfor:TF2852|3end_conserved_hypothetical_protein_3040221..3040371_POSITIVE