Origin IGS: tgaatcatataaacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagcccttataaacctcgcagaggcggtgaattgttaaattgttgagttgttgattcgttgacatgttgatttgttggctgaccgctgaatactgaccgctaacgattatatcaggcttacagccctctaaccaaggtatgggcatggatcccccacccttacgggatggggctgaaataattcgggcttccagcccttgtatgccctgcgggcgttgagttgttgattcgttgatttgttggctgtcctgattgctgaatgctgaccgctaacaaacaattacgaattacgcaagctgaatactgatagctgactgctgtaaaagccctgaaagggcataataattcagcccaatgcgaagcgttggggaaaaaaagcatcgcatctcggcggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattattaatggtaaacaccgaacagtgtatcgcgtaatttgggataataagtagtaacggattaaagaggcaatgtagcaaagtatgaagctaaaaaagaaaaagaaggagacaatggaaagggcatgtcaggtggatcattttgaaaggcgaacacggaaagaagatattaaacgaaatatcgagatggtttttacagcgtgattcaaaacttttttaataattccacgctcttaaaataaaaaaatttatttacttttgcggcgtaaaaaaatctttgactaata .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 tattagtcaaagatttttttacgccgcaaaagtaaataaatttttttattttaagagcgtggaattattaaaaaagttttgaatcacgctgtaaaaaccatctcgatatttcgtttaatatcttctttccgtgttcgcctttcaaaatgatccacctgacatgccctttccattgtctccttctttttcttttttagcttcatactttgctacattgcctctttaatccgttactacttattatcccaaattacgcgatacactgttcggtgtttaccattaataatggacgtacgaatgtacgacaatggttacgtcaagcttacagccctccgccgagatgcgatgctttttttccccaacgcttcgcattgggctgaattattatgccctttcagggcttttacagcagtcagctatcagtattcagcttgcgtaattcgtaattgtttgttagcggtcagcattcagcaatcaggacagccaacaaatcaacgaatcaacaactcaacgcccgcagggcatacaagggctggaagcccgaattatttcagccccatcccgtaagggtgggggatccatgcccataccttggttagagggctgtaagcctgatataatcgttagcggtcagtattcagcggtcagccaacaaatcaacatgtcaacgaatcaacaactcaacaatttaacaattcaccgcctctgcgaggtttataagggctgaaggcctgaattaaattcattcttattggttctattgcggaatctgggtttatatgattca Mask Tandem Repeat Region ================================================ tgaatcatataaacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagcccttataaacctcgcagaggcggtgaattgttaaattgttgagttgttgattcgttgacatgttgatttgttggctgaccgctgaatactgaccgctaacgattatatcaggcttacagccctctaaccaaggtatgggcatggatcccccacccttacgggatggggctgaaataattcgggcttccagcccttgtatgccctgcgggcgttgagttgttgattcgttgatttgttggctgtcctgattgctgaatgctgaccgctaacaaacaattacgaattacgcaagctgaatactgatagctgactgctgtaaaagccctgaaagggcataataattcagcccaatgcgaagcgttggggaaaaaaagcatcgcatctcggcggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattattaatggtaaacaccgaacagtgtatcgcgtaatttgggataataagtagtaacggattaaagaggcaatgtagcaaagtatgaagctaaaaaagaaaaagaaggagacaatggaaagggcatgtcaggtggatcattttgaaaggcgaacacggaaagaagatattaaacgaaatatcgagatggtttttacagcgtgattcaaaacttttttaataattccacgctcttaaaataaaaaaatttatttacttttgcggcgtaaaaaaatctttgactaata Find is-nt database================================================ Query_seq: TF0029:TF0030|TF0029:TF0030:hypothetical protein:N-acetylneuraminate lyase:->->:25123..25909 787 tgaatcatataaacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagcccttataaacctcgcagaggcggtgaattgttaaattgttgagttgttgattcgttgacatgttgatttgttggctgaccgctgaatactgaccgctaacgattatatcaggcttacagccctctaaccaaggtatgggcatggatcccccacccttacgggatggggctgaaataattcgggcttccagcccttgtatgccctgcgggcgttgagttgttgattcgttgatttgttggctgtcctgattgctgaatgctgaccgctaacaaacaattacgaattacgcaagctgaatactgatagctgactgctgtaaaagccctgaaagggcataataattcagcccaatgcgaagcgttggggaaaaaaagcatcgcatctcggcggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattattaatggtaaacaccgaacagtgtatcgcgtaatttgggataataagtagtaacggattaaagaggcaatgtagcaaagtatgaagctaaaaaagaaaaagaaggagacaatggaaagggcatgtcaggtggatcattttgaaaggcgaacacggaaagaagatattaaacgaaatatcgagatggtttttacagcgtgattcaaaacttttttaataattccacgctcttaaaataaaaaaatttatttacttttgcggcgtaaaaaaatctttgactaata Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: TF0029:TF0030|TF0029:TF0030:hypothetical protein:N-acetylneuraminate lyase:->->:25123..25909 787 tgaatcatataaacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagcccttataaacctcgcagaggcggtgaattgttaaattgttgagttgttgattcgttgacatgttgatttgttggctgaccgctgaatactgaccgctaacgattatatcaggcttacagccctctaaccaaggtatgggcatggatcccccacccttacgggatggggctgaaataattcgggcttccagcccttgtatgccctgcgggcgttgagttgttgattcgttgatttgttggctgtcctgattgctgaatgctgaccgctaacaaacaattacgaattacgcaagctgaatactgatagctgactgctgtaaaagccctgaaagggcataataattcagcccaatgcgaagcgttggggaaaaaaagcatcgcatctcggcggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattattaatggtaaacaccgaacagtgtatcgcgtaatttgggataataagtagtaacggattaaagaggcaatgtagcaaagtatgaagctaaaaaagaaaaagaaggagacaatggaaagggcatgtcaggtggatcattttgaaaggcgaacacggaaagaagatattaaacgaaatatcgagatggtttttacagcgtgattcaaaacttttttaataattccacgctcttaaaataaaaaaatttatttacttttgcggcgtaaaaaaatctttgactaata Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: TF0029:TF0030|TF0029:TF0030:hypothetical protein:N-acetylneuraminate lyase:->->:25123..25909 787 tgaatcatataaacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagcccttataaacctcgcagaggcggtgaattgttaaattgttgagttgttgattcgttgacatgttgatttgttggctgaccgctgaatactgaccgctaacgattatatcaggcttacagccctctaaccaaggtatgggcatggatcccccacccttacgggatggggctgaaataattcgggcttccagcccttgtatgccctgcgggcgttgagttgttgattcgttgatttgttggctgtcctgattgctgaatgctgaccgctaacaaacaattacgaattacgcaagctgaatactgatagctgactgctgtaaaagccctgaaagggcataataattcagcccaatgcgaagcgttggggaaaaaaagcatcgcatctcggcggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattattaatggtaaacaccgaacagtgtatcgcgtaatttgggataataagtagtaacggattaaagaggcaatgtagcaaagtatgaagctaaaaaagaaaaagaaggagacaatggaaagggcatgtcaggtggatcattttgaaaggcgaacacggaaagaagatattaaacgaaatatcgagatggtttttacagcgtgattcaaaacttttttaataattccacgctcttaaaataaaaaaatttatttacttttgcggcgtaaaaaaatctttgactaata Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 tgaatcatataaacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagcccttataaacctcgcagaggcggtgaattgttaaattgttgagttgttgattcgttgacatgttgatttgttggctgaccgctgaatactgaccgctaacgattatatcaggcttacagccctctaaccaaggtatgggcatggatcccccacccttacgggatggggctgaaataattcgggcttccagcccttgtatgccctgcgggcgttgagttgttgattcgttgatttgttggctgtcctgattgctgaatgctgaccgctaacaaacaattacgaattacgcaagctgaatactgatagctgactgctgtaaaagccctgaaagggcataataattcagcccaatgcgaagcgttggggaaaaaaagcatcgcatctcggcggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattattaatggtaaacaccgaacagtgtatcgcgtaatttgggataataagtagtaacggattaaagaggcaatgtagcaaagtatgaagctaaaaaagaaaaagaaggagacaatggaaagggcatgtcaggtggatcattttgaaaggcgaacacggaaagaagatattaaacgaaatatcgagatggtttttacagcgtgattcaaaacttttttaataattccacgctcttaaaataaaaaaatttatttacttttgcggcgtaaaaaaatctttgactaata Predict ORF larger than 30AA ================================================ Protein_Len: 32 Strand: + Start: 9 End: 104 ........ M N P D S A I E P I R M N L I Q A F S P Y K P R R G G E L L N C ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 37 Strand: + Start: 167 End: 277 ...................................................................................................................................................................... M I S G L Q P S N Q G M G M D P P P L R D G A E I I R A S S P C M P C G R .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 34 Strand: + Start: 372 End: 473 ................................................................................................................................................................................................................................................................................................................................................................................... M T A V K A L K G H N N S A Q C E A L G K K S I A S R R R A V S L T .......................................................................................................................................................................................................................................................................................................................... Protein_Len: 30 Strand: + Start: 416 End: 505 ............................................................................................................................................................................................................................................................................................................................................................................................................................... M R S V G E K K H R I S A E G C K L D V T I V V H S Y V H Y .......................................................................................................................................................................................................................................................................................... Protein_Len: 39 Strand: + Start: 585 End: 701 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M K L K K K K K E T M E R A C Q V D H F E R R T R K E D I K R N I E M V F T A ...................................................................................... Protein_Len: 31 Strand: - Start: 565 End: 657 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L P L T A F Y S A L F S F S P S L P F P M D P P D N Q F A F M .................................................................................................................................. Protein_Len: 57 Strand: - Start: 411 End: 581 .......................................................................................................................................................................................................................................................................................................................................................................................................................... G L A F R Q P F F A D C R P P P S Y A Q R L W Q R V N T R G N N I T F V S C H I A Y N P I I L L L P N F L C H L M .............................................................................................................................................................................................................. Protein_Len: 43 Strand: - Start: 352 End: 480 ............................................................................................................................................................................................................................................................................................................................................................... A L Q I S I A S Q Q L L G S L A Y Y N L G I R L T P S F F C R M E A S P Q L S S T V M ................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 224 End: 616 ............................................................................................................................................................................................................................... L M A D R R L A T L K V Y G N D Y M R V D M I L P L C R V T Y R T I Q S L L Y Y R I L S A I Y C L I F S F F F F F S V M ........................................................................................................................................................................... Protein_Len: 50 Strand: - Start: 192 End: 341 ............................................................................................................................................................................................... G L Y P C P D G V R V P H P Q F L E P K W G K Y A R R A N L Q Q N T S K N A T R I A S H Q G S V F M .............................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: - Start: 64 End: 297 ............................................................... T S M N I Q Q S V A S Y Q G S V I I D P K C G E L W P I P M S G G G K R S P A S I I R A E L G Q I G Q P R Q T T S E N M .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... tgaatcatataaacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagcccttataaacctcgcagaggcggtgaattgttaaattgttgagttgttgattcgttgacatgttgatttgttggctgaccgctgaatactgaccgctaacgattatatcaggcttacagccctctaaccaaggtatgggcatggatcccccacccttacgggatggggctgaaataattcgggcttccagcccttgtatgccctgcgggcgttgagttgttgattcgttgatttgttggctgtcctgattgctgaatgctgaccgctaacaaacaattacgaattacgcaagctgaatactgatagctgactgctgtaaaagccctgaaagggcataataattcagcccaatgcgaagcgttggggaaaaaaagcatcgcatctcggcggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattattaatggtaaacaccgaacagtgtatcgcgtaatttgggataataagtagtaacggattaaagaggcaatgtagcaaagtatgaagctaaaaaagaaaaagaaggagacaatggaaagggcatgtcaggtggatcattttgaaaggcgaacacggaaagaagatattaaacgaaatatcgagatggtttttacagcgtgattcaaaacttttttaataattccacgctcttaaaataaaaaaatttatttacttttgcggcgtaaaaaaatctttgactaata Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ tgaatcatataaacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagcccttataaacctcgcagaggcggtgaattgttaaattgttgagttgttgattcgttgacatgttgatttgttggctgaccgctgaatactgaccgctaacgattatatcaggcttacagccctctaaccaaggtatgggcatggatcccccacccttacgggatggggctgaaataattcgggcttccagcccttgtatgccctgcgggcgttgagttgttgattcgttgatttgttggctgtcctgattgctgaatgctgaccgctaacaaacaattacgaattacgcaagctgaatactgatagctgactgctgtaaaagccctgaaagggcataataattcagcccaatgcgaagcgttggggaaaaaaagcatcgcatctcggcggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattattaatggtaaacaccgaacagtgtatcgcgtaatttgggataataagtagtaacggattaaagaggcaatgtagcaaagtatgaagctaaaaaagaaaaagaaggagacaatggaaagggcatgtcaggtggatcattttgaaaggcgaacacggaaagaagatattaaacgaaatatcgagatggtttttacagcgtgattcaaaacttttttaataattccacgctcttaaaataaaaaaatttatttacttttgcggcgtaaaaaaatctttgactaata Predict TransTerm conf > 70================================================ TransTerm Strand: + Conf: 73 HP_score: -9.1 Tail_Score: -3.50393 Start: 246 End: 258 Full_Region: GGGCTGAAATAATTC GGGCT TCC AGCCC TTGTATGCCCTGCGG .....................................................................................................................................................................................................................................................GGGCTTCCAGCCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: - Conf: 83 HP_score: -9.1 Tail_Score: -4.08767 Start: 387 End: 399 Full_Region: gggctgaattattat gccct ttc agggc ttttacagcagtcag ..................................................................................................................................................................................................................................................................................................................................................................................................gccctttcagggc.................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 54 HP_score: -2.8 Tail_Score: -4.011 Start: 666 End: 683 Full_Region: tgtaaaaaccatctc gatatt tcgttt aatatc ttctttccgtgttcg .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gatatttcgtttaatatc........................................................................................................ Find igs database================================================ Query_seq: TF0029:TF0030|TF0029:TF0030:hypothetical protein:N-acetylneuraminate lyase:->->:25123..25909 787 tgaatcatataaacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagcccttataaacctcgcagaggcggtgaattgttaaattgttgagttgttgattcgttgacatgttgatttgttggctgaccgctgaatactgaccgctaacgattatatcaggcttacagccctctaaccaaggtatgggcatggatcccccacccttacgggatggggctgaaataattcgggcttccagcccttgtatgccctgcgggcgttgagttgttgattcgttgatttgttggctgtcctgattgctgaatgctgaccgctaacaaacaattacgaattacgcaagctgaatactgatagctgactgctgtaaaagccctgaaagggcataataattcagcccaatgcgaagcgttggggaaaaaaagcatcgcatctcggcggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattattaatggtaaacaccgaacagtgtatcgcgtaatttgggataataagtagtaacggattaaagaggcaatgtagcaaagtatgaagctaaaaaagaaaaagaaggagacaatggaaagggcatgtcaggtggatcattttgaaaggcgaacacggaaagaagatattaaacgaaatatcgagatggtttttacagcgtgattcaaaacttttttaataattccacgctcttaaaataaaaaaatttatttacttttgcggcgtaaaaaaatctttgactaata Intra-Species Hit: Count: 28 Min: 1 Max: 767 Len: 767 Subject: tfor_TF0029_TF0030|hypothetical protein:N-acetylneuraminate lyase|POSITIVE:POSITIVE|[25123,25909]|787 HSP 1 e-value: 0.0 bit: 1366.0 Len: 767 Query Start:1 Query End:767 Subject Strand: POSITIVE Subject Start: 1 Subject End: 767 tgaatcatataaacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagcccttataaacctcgcagaggcggtgaattgttaaattgttgagttgttgattcgttgacatgttgatttgttggctgaccgctgaatactgaccgctaacgattatatcaggcttacagccctctaaccaaggtatgggcatggatcccccacccttacgggatggggctgaaataattcgggcttccagcccttgtatgccctgcgggcgttgagttgttgattcgttgatttgttggctgtcctgattgctgaatgctgaccgctaacaaacaattacgaattacgcaagctgaatactgatagctgactgctgtaaaagccctgaaagggcataataattcagcccaatgcgaagcgttggggnnnnnnngcatcgcatctcggcggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattattaatggtaaacaccgaacagtgtatcgcgtaatttgggataataagtagtaacggattaaagaggcaatgtagcaaagtatgaagctnnnnnnnnnnnngaaggagacaatggaaagggcatgtcaggtggatcattttgaaaggcgaacacggaaagaagatattaaacgaaatatcgagatggtttttacagcgtgattcaaaacttttttaataattccacgctcttaaaatnnnnnnntttatttacttttgcggcgt.................... tgaatcatataaacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagcccttataaacctcgcagaggcggtgaattgttaaattgttgagttgttgattcgttgacatgttgatttgttggctgaccgctgaatactgaccgctaacgattatatcaggcttacagccctctaaccaaggtatgggcatggatcccccacccttacgggatggggctgaaataattcgggcttccagcccttgtatgccctgcgggcgttgagttgttgattcgttgatttgttggctgtcctgattgctgaatgctgaccgctaacaaacaattacgaattacgcaagctgaatactgatagctgactgctgtaaaagccctgaaagggcataataattcagcccaatgcgaagcgttggggaaaaaaagcatcgcatctcggcggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattattaatggtaaacaccgaacagtgtatcgcgtaatttgggataataagtagtaacggattaaagaggcaatgtagcaaagtatgaagctaaaaaagaaaaagaaggagacaatggaaagggcatgtcaggtggatcattttgaaaggcgaacacggaaagaagatattaaacgaaatatcgagatggtttttacagcgtgattcaaaacttttttaataattccacgctcttaaaataaaaaaatttatttacttttgcggcgt.................... Subject: tfor_TF1273_TF1274|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1357523,1357760]|238 HSP 1 e-value: 8.0E-49 bit: 196.0 Len: 145 Query Start:403 Query End:547 Subject Strand: NEGATIVE Subject Start: 94 Subject End: 237 ..................................................................................................................................................................................................................................................................................................................................................................................................................ataattcagcccaatgcgaagcgttggggnnnnnnngcatcgcatctcggcggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattattaatggtaaacaccgaacagtgtatcgcgtaatttgggataa................................................................................................................................................................................................................................................ ..................................................................................................................................................................................................................................................................................................................................................................................................................ataattcagcccaatgcgaagcgttgggggaaaag-gcatcgcatcccggcggagggctgtaagcctgacgtaaccattgtcgtgcattcgtacgtccatgattaatggtaaacgccgaacagtgtatcgcgtaatttgggataa................................................................................................................................................................................................................................................ Subject: tfor_TF3104_TF3105|outer membrane protein, TonB dependent receptor:hypothetical protein|POSITIVE:POSITIVE|[3337511,3338207]|697 HSP 1 e-value: 5.0E-47 bit: 190.0 Len: 100 Query Start:89 Query End:188 Subject Strand: POSITIVE Subject Start: 533 Subject End: 632 ........................................................................................tgaattgttaaattgttgagttgttgattcgttgacatgttgatttgttggctgaccgctgaatactgaccgctaacgattatatcaggcttacagccct....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................tgaattgttaaattgttgagttgttgattcgttgacatgttgatttgttggctgaccgctgaatactgaccgctaacgattatatcaggctttcagccct....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 5.0E-38 bit: 161.0 Len: 121 Query Start:18 Query End:138 Subject Strand: POSITIVE Subject Start: 446 Subject End: 566 .................gattccgcaatagaaccaataagaatgaatttaattcaggccttcagcccttataaacctcgcagaggcggtgaattgttaaattgttgagttgttgattcgttgacatgttgatttgttg......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .................gattcggcaatagaaccaataagaatgaatttaattcaggccttcagctcttataaaccccgcagaggcggtgaattgttaaattgttgaattgttaaattgttgagttgttgattcgttg......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2047_TF2048|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[2210359,2210782]|424 HSP 1 e-value: 5.0E-47 bit: 190.0 Len: 182 Query Start:357 Query End:538 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 181 ....................................................................................................................................................................................................................................................................................................................................................................gctgaatactgatagctgactgctgtaaaagccctgaaagggcataataattcagcccaatgcgaagcgttggggnnnnnnngcatcgcatctcggcggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattattaatggtaaacaccgaacagtgtatcgcgtaat......................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................gctgaatgctgactgctgattgcagaaagagccctgaaagggcgagataattcagcccaatgcgaagcgttggggaaaaag-gcatcgcatcccggcggagggctgtaagcctgacgtaaccattgtcgtgcattcgtacgtccatgattaatggtaaacgccgaacagtgtatcgcgtaat......................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-16 bit: 89.7 Len: 57 Query Start:12 Query End:68 Subject Strand: NEGATIVE Subject Start: 337 Subject End: 393 ...........aacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagccct............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...........aacccagattccgcaatagaagaaataagaatgaatttaattcaggctttcagccct............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 3.0E-14 bit: 81.8 Len: 93 Query Start:49 Query End:141 Subject Strand: NEGATIVE Subject Start: 191 Subject End: 283 ................................................taattcaggccttcagcccttataaacctcgcagaggcggtgaattgttaaattgttgagttgttgattcgttgacatgttgatttgttggct...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................taattcgggctttcagccctcgtaaaccccgcagaggcggtgagttgttgaattgttgagatgtttatttgtttagttgttgatttgttggct...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 5.0E-13 bit: 77.8 Len: 47 Query Start:213 Query End:259 Subject Strand: NEGATIVE Subject Start: 264 Subject End: 310 ....................................................................................................................................................................................................................ccccacccttacgggatggggctgaaataattcgggcttccagccct................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ....................................................................................................................................................................................................................ccccacccttgcgggatggggctgaaataattcgggctttcagccct................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 5 e-value: 5.0E-7 bit: 58.0 Len: 37 Query Start:292 Query End:328 Subject Strand: NEGATIVE Subject Start: 169 Subject End: 205 ...................................................................................................................................................................................................................................................................................................gttgatttgttggctgtcctgattgctgaatgctgac........................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................................................................................gttgatttgttggctctgctgattgctgaatgctgac........................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF0339_TF0340|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[363808,364032]|225 HSP 1 e-value: 8.0E-46 bit: 186.0 Len: 168 Query Start:371 Query End:538 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 167 ..................................................................................................................................................................................................................................................................................................................................................................................gctgactgctgtaaaagccctgaaagggcataataattcagcccaatgcgaagcgttggggnnnnnnngcatcgcatctcggcggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattattaatggtaaacaccgaacagtgtatcgcgtaat......................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................gctgactgctgtaagagccctgaaagggcgtgttaattcagcccaatgcgaagcgctggggaaaaag-gcatcgcgtctcggcgaagggctgtaagcctgacgtaacccttgtcgtacattcgtacgttcattattaatggtaaacgccgaaccgtgtatcgcgtaat......................................................................................................................................................................................................................................................... Subject: tfor_TF1654_TF1655|hypothetical protein:long-chain-fatty-acid-CoA ligase|POSITIVE:POSITIVE|[1768766,1769418]|653 HSP 1 e-value: 1.0E-41 bit: 172.0 Len: 111 Query Start:12 Query End:122 Subject Strand: POSITIVE Subject Start: 390 Subject End: 500 ...........aacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagcccttataaacctcgcagaggcggtgaattgttaaattgttgagttgttgattcgttg......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...........aacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagcccttataaacctcgcagaggcggtgagttgttgatttgttgacatgttgatttgttg......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-25 bit: 119.0 Len: 84 Query Start:105 Query End:188 Subject Strand: POSITIVE Subject Start: 467 Subject End: 550 ........................................................................................................tgagttgttgattcgttgacatgttgatttgttggctgaccgctgaatactgaccgctaacgattatatcaggcttacagccct....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................tgagttgttgatttgttgacatgttgatttgttggctgattactgaatactgaccgctaacgattatatcgggcttgcagccct....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF0467_TF0468|acetyltransferase-related protein:hypothetical protein|POSITIVE:POSITIVE|[486604,487068]|465 HSP 1 e-value: 1.0E-38 bit: 163.0 Len: 109 Query Start:439 Query End:547 Subject Strand: NEGATIVE Subject Start: 20 Subject End: 129 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................gcatcgcatctcggcggagggctgtaa-gcttgacgtaaccattgtcgtacattcgtacgtccattattaatggtaaacaccgaacagtgtatcgcgtaatttgggataa................................................................................................................................................................................................................................................ ......................................................................................................................................................................................................................................................................................................................................................................................................................................................gcatcgcatctcggcggagggctgaaaagcctgacgtaaccattgtcgtacattcgcacgtccattattaatggtaaacgccgaacaatgtatcgcgtaatttgggataa................................................................................................................................................................................................................................................ HSP 2 e-value: 8.0E-9 bit: 63.9 Len: 40 Query Start:386 Query End:425 Subject Strand: NEGATIVE Subject Start: 335 Subject End: 374 .................................................................................................................................................................................................................................................................................................................................................................................................agccctgaaagggcataataattcagcccaatgcgaagcg.......................................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................agccctgaaagggcgtaataattcagcccaatgcgtagcg.......................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1473_TF1474|hypothetical protein:6- phosphogluconolactonase|POSITIVE:POSITIVE|[1567027, 1567481]|455 HSP 1 e-value: 3.0E-36 bit: 155.0 Len: 138 Query Start:406 Query End:543 Subject Strand: NEGATIVE Subject Start: 34 Subject End: 172 .....................................................................................................................................................................................................................................................................................................................................................................................................................attcagcccaatgcgaagcgttggggnnnnnnn-gcatcgcatctcggcggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattattaatggtaaacaccgaacagtgtatcgcgtaatttggg.................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................................................................................................................attcagcccaatgcgaagcgttgggggaaaaaaagcatcgtatctcggcggagggctgtaagcctgacgtaaccattgtcgtacattcatacgtccattattaatggaaaacgcccaacagtatatcgcgtgatttggg.................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-18 bit: 95.6 Len: 52 Query Start:209 Query End:260 Subject Strand: NEGATIVE Subject Start: 256 Subject End: 307 ................................................................................................................................................................................................................gatcccccacccttacgggatggggctgaaataattcgggcttccagccctt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................gatcccccacccttacgggatggggctgaaataattcgggctttcagccctt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 2.0E-18 bit: 95.6 Len: 60 Query Start:10 Query End:69 Subject Strand: NEGATIVE Subject Start: 327 Subject End: 386 .........taaacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagccctt.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. .........taaacccagattcggcaatagaacaaataaggatgaatttaattcaggccttcagccctt.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: tfor_TF0585_TF0586|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[616824,617452]|629 HSP 1 e-value: 1.0E-32 bit: 143.0 Len: 138 Query Start:406 Query End:543 Subject Strand: POSITIVE Subject Start: 388 Subject End: 524 .....................................................................................................................................................................................................................................................................................................................................................................................................................attcagcccaatgcgaagcgttggggnnnnnnngcatcgcatctcggcggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattattaatggtaaacaccgaacagtgtatcgcgtaatttggg.................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................................................................................................................attcagcccaatgcgaagcgttggggaaaaag-gcttcacatttcggcggagggctgtaagcctgacgtaacccttgtcgtacattcgtacgtccattattaatggtaaacgcccaatagggtaccgcgtaatttggg.................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-25 bit: 119.0 Len: 88 Query Start:173 Query End:260 Subject Strand: POSITIVE Subject Start: 219 Subject End: 306 ............................................................................................................................................................................tcaggcttacagccctctaaccaaggtatgggcatggatcccccacccttacgggatggggctgaaataattcgggcttccagccctt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................................................................................................tcaggccttcagccctctaaccaagatatgggcatggatcccccacccttacgggatggggctgaaatatatctggctttcagccctt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 1.0E-23 bit: 113.0 Len: 57 Query Start:12 Query End:68 Subject Strand: POSITIVE Subject Start: 178 Subject End: 234 ...........aacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagccct............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...........aacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagccct............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF0821_TF0822|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[880256,880626]|371 HSP 1 e-value: 2.0E-31 bit: 139.0 Len: 90 Query Start:454 Query End:543 Subject Strand: POSITIVE Subject Start: 110 Subject End: 199 .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattattaatggtaaacaccgaacagtgtatcgcgtaatttggg.................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ggagggctgtaagcctgacgtaaccattgtcgtacattcgcacatccattattaatggtaaacgccgaaaagtgtatcgcgtaatttggg.................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-13 bit: 79.8 Len: 48 Query Start:213 Query End:260 Subject Strand: POSITIVE Subject Start: 246 Subject End: 293 ....................................................................................................................................................................................................................ccccacccttacgggatggggctgaaataattcgggcttccagccctt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................ccccacccttgcgggatggggctgaaataattcgggctttcagccctt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF0179_TF0180|pyrophosphate-energized proton pump:carboxynorspermidine decarboxylase|POSITIVE:POSITIVE|[190752,191406]|655 HSP 1 e-value: 2.0E-31 bit: 139.0 Len: 138 Query Start:406 Query End:543 Subject Strand: NEGATIVE Subject Start: 132 Subject End: 273 .....................................................................................................................................................................................................................................................................................................................................................................................................................attcagcccaatgcgaagcgttggggnnnnnnngcatcgcatctcggcggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattatt-----aatggtaaacaccgaacagtgtatcgcgtaatttggg.................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................................................................................................................attcagcccaatgcgaagcgttggg-aaaaaaggcatcgcgtctcggcggagggctgtaagcctgacgtaacccttgtcgtacattcgtacgtacattattaatgtaatggtaaacgcccaacagtgtatcgcgtaatttggg.................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-31 bit: 139.0 Len: 154 Query Start:35 Query End:188 Subject Strand: NEGATIVE Subject Start: 363 Subject End: 516 ..................................aataagaatgaatttaattcaggccttcagcccttataaacctcgcagaggcggtgaattgttaaattgttgagttgttgattcgttgacatgttgatttgttggctgaccgctgaatactgaccgctaacgattatatcaggcttacagccct....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................aataaggatgaatttaattcagaccttcagcccttataaaccccgcagaggcggtgatgcggtgagttgttgacatgttgaattgttgagttgttgagttgttggctgattgctgaacactgaccgctaacgattatatcgggcttgcagccct....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2547_TF2548|hypothetical protein:30S ribosomal protein S12|POSITIVE:POSITIVE|[2731008,2731377]|370 HSP 1 e-value: 2.0E-24 bit: 115.0 Len: 101 Query Start:447 Query End:547 Subject Strand: POSITIVE Subject Start: 5 Subject End: 106 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................tctcggcggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattatta-atggtaaacaccgaacagtgtatcgcgtaatttgggataa................................................................................................................................................................................................................................................ ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................tctcggcggagggttgtaagtctgacgtaacccttgtcgtatattcgtacgtctattattatatgataaacgccgaacggtgtatcgcgtaatttgggataa................................................................................................................................................................................................................................................ Subject: tfor_TF1585_TF1586|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1690671,1691110]|440 HSP 1 e-value: 9.0E-21 bit: 103.0 Len: 100 Query Start:163 Query End:262 Subject Strand: NEGATIVE Subject Start: 196 Subject End: 295 ..................................................................................................................................................................aacgattatatcaggcttacagccctctaaccaaggtatgggcatggatcccccacccttacgggatggggctgaaataattcgggcttccagcccttgt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ..................................................................................................................................................................aacgattatatcaggctttcagccctccaaacggggtatgggaatcgataccccacccttgcgggatggggctgaaatatatcgggcttgcagcccttgt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 5.0E-7 bit: 58.0 Len: 45 Query Start:386 Query End:430 Subject Strand: NEGATIVE Subject Start: 47 Subject End: 91 .................................................................................................................................................................................................................................................................................................................................................................................................agccctgaaagggcataataattcagcccaatgcgaagcgttggg..................................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................agccctgaaagggcgtgttaattcagcccaatgcaaagcgttggg..................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF3003_TF3004|hypothetical protein:phosphoribosylformylglycinamidine (FGAM) synthase|POSITIVE:POSITIVE|[3220690,3220958]|269 HSP 1 e-value: 2.0E-18 bit: 95.6 Len: 60 Query Start:9 Query End:68 Subject Strand: NEGATIVE Subject Start: 115 Subject End: 174 ........ataaacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagccct............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ........ataaacccagattacgcaatagaagaaataagaatgaatttaattcaggccttcagccct............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-13 bit: 79.8 Len: 48 Query Start:213 Query End:260 Subject Strand: NEGATIVE Subject Start: 43 Subject End: 90 ....................................................................................................................................................................................................................ccccacccttacgggatggggctgaaataattcgggcttccagccctt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................ccccacccttgcgggatggggctgaaataattcgggctttcagccctt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2815_TF2816|meso-diaminopimelate D-dehydrogenase:hypothetical protein|POSITIVE:POSITIVE|[3006481,3007064]|584 HSP 1 e-value: 2.0E-18 bit: 95.6 Len: 96 Query Start:167 Query End:262 Subject Strand: NEGATIVE Subject Start: 391 Subject End: 486 ......................................................................................................................................................................attatatcaggcttacagccctctaaccaaggtatgggcatggatcccccacccttacgggatggggctgaaataattcgggcttccagcccttgt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ......................................................................................................................................................................attatgtcaggctttcagccctctgaacaaggtctgggaatcgatatcccacccttacgggatggggctgaaatatatcgggctttcagcccttgt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 8.0E-9 bit: 63.9 Len: 48 Query Start:371 Query End:418 Subject Strand: NEGATIVE Subject Start: 258 Subject End: 305 ..................................................................................................................................................................................................................................................................................................................................................................................gctgactgctgtaaaagccctgaaagggcataataattcagcccaatg................................................................................................................................................................................................................................................................................................................................................................................. ..................................................................................................................................................................................................................................................................................................................................................................................gctgactgctttaaaagccctgaaagggcgcattaattcagcccaatg................................................................................................................................................................................................................................................................................................................................................................................. Subject: tfor_TF1182_TF1184|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1268999,1269143]|145 HSP 1 e-value: 2.0E-18 bit: 95.6 Len: 106 Query Start:371 Query End:476 Subject Strand: POSITIVE Subject Start: 6 Subject End: 110 ..................................................................................................................................................................................................................................................................................................................................................................................gctgactgctgtaaaagccctgaaagggcataataattcagcccaatgcgaagcgttggggnnnnnnngcatcgcatctcggcggagggctgtaagcttgacgtaa....................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................gctgaccgctgtaacagccctgaaagggcgagataattcagcccaatgcgaagcgtttggg-aaaaaggcatcgcatctcggcgaagggctgtaagcctgacgtaa....................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF0677_TF0678|ATP-binding protein, Mrp/Nbp35 family, involved in chromosome partitioning:hypothetical protein|POSITIVE:POSITIVE|[721043,721242]|200 HSP 1 e-value: 2.0E-18 bit: 95.6 Len: 60 Query Start:9 Query End:68 Subject Strand: POSITIVE Subject Start: 5 Subject End: 64 ........ataaacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagccct............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ........ataaacccagattacgcaatagaagaaataagaatgaatttaattcaggccttcagccct............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 3.0E-11 bit: 71.9 Len: 48 Query Start:213 Query End:260 Subject Strand: POSITIVE Subject Start: 89 Subject End: 136 ....................................................................................................................................................................................................................ccccacccttacgggatggggctgaaataattcgggcttccagccctt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................ccccacccttgcgggatagggctgaaataattcgggctttcagccctt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2201_TF2202|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2378345,2378821]|477 HSP 1 e-value: 4.0E-17 bit: 91.7 Len: 90 Query Start:454 Query End:543 Subject Strand: NEGATIVE Subject Start: 214 Subject End: 303 .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ggagggctgtaagcttgacgtaaccattgtcgtacattcgtacgtccattattaatggtaaacaccgaacagtgtatcgcgtaatttggg.................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ggagggctgtaagcctgacataaccattgtcatacatttgcacatccattattaatggtaaacaccaaacagggggtcgcataatttggg.................................................................................................................................................................................................................................................... HSP 2 e-value: 5.0E-10 bit: 67.9 Len: 46 Query Start:386 Query End:431 Subject Strand: NEGATIVE Subject Start: 323 Subject End: 368 .................................................................................................................................................................................................................................................................................................................................................................................................agccctgaaagggcataataattcagcccaatgcgaagcgttgggg.................................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................agccctgaaagggcgagataattcagcccaatgcgaagcgttgggg.................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2190_TF2191|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2365707,2366073]|367 HSP 1 e-value: 1.0E-16 bit: 89.7 Len: 61 Query Start:8 Query End:68 Subject Strand: POSITIVE Subject Start: 126 Subject End: 186 .......tataaacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagccct............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .......tataaacccggattacgcaatagaagaaataagaatgaatttaattcaggccttcagccct............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-13 bit: 79.8 Len: 48 Query Start:213 Query End:260 Subject Strand: POSITIVE Subject Start: 211 Subject End: 258 ....................................................................................................................................................................................................................ccccacccttacgggatggggctgaaataattcgggcttccagccctt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................ccccacccttgcgggatggggctgaaataattcgggctttcagccctt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1181_TF1183|methylated-DNA--[protein]-cysteine S-methyltransferase:hypothetical protein|POSITIVE:POSITIVE|[1268052,1268530]|479 HSP 1 e-value: 6.0E-16 bit: 87.7 Len: 52 Query Start:18 Query End:69 Subject Strand: POSITIVE Subject Start: 177 Subject End: 228 .................gattccgcaatagaaccaataagaatgaatttaattcaggccttcagccctt.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. .................gattccgcaatagaagaaataagaatgaatttaattcaggccttcagccctt.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-15 bit: 85.7 Len: 85 Query Start:379 Query End:463 Subject Strand: POSITIVE Subject Start: 375 Subject End: 458 ..........................................................................................................................................................................................................................................................................................................................................................................................ctgtaaaagccctgaaagggcataataattcagcccaatgcgaagcgttggggnnnnnnngcatcgcatctcggcggagggctgt.................................................................................................................................................................................................................................................................................................................................... ..........................................................................................................................................................................................................................................................................................................................................................................................ctgtaaaagccctgaaagggcgcattaattcagcccaatgcgaagcgttgggg-aaaaaggcatcgcatctcggcgaagggctgt.................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF1762_TF1763|hypothetical protein:K+-dependent Na+/Ca+ exchanger related-protein|POSITIVE:POSITIVE|[1899709,1900545]|837 HSP 1 e-value: 2.0E-15 bit: 85.7 Len: 59 Query Start:10 Query End:68 Subject Strand: NEGATIVE Subject Start: 302 Subject End: 360 .........taaacccagattccgcaatagaaccaataagaatgaatttaattcaggccttcagccct............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .........taaacccggattccgcaatagaagaaataaaaatgaatttaattcaggccttcagccct............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-9 bit: 65.9 Len: 49 Query Start:213 Query End:261 Subject Strand: NEGATIVE Subject Start: 230 Subject End: 278 ....................................................................................................................................................................................................................ccccacccttacgggatggggctgaaataattcgggcttccagcccttg.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................................................................................ccccacccttgcgggatggggctgaaatatgtcgggctttcagcccttg.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: tfor_TF2161_TF2162|conserved hypothetical protein:thermolysin precursor|POSITIVE:POSITIVE|[2338423,2338808]|386 HSP 1 e-value: 3.0E-14 bit: 81.8 Len: 142 Query Start:137 Query End:278 Subject Strand: NEGATIVE Subject Start: 150 Subject End: 285 ........................................................................................................................................tggctgaccgctgaatactgaccgctaacgattatatcaggcttacagccctctaaccaaggtatgggcatggatcccccacccttacgggatggggctgaaataattcgggcttccagcccttgtatgccctgcgggcgtt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................tggctgattgctgaatactgaccgataa--attacatcaggcttacagccctccgaacaaggt--gggacggga--ccccacccttacgggatggggctgaaacagaacgggctttcagcccttgtatgcccttggggcgtt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: tfor_TF0021_TF0022|outer membrane phospholipase A:two-component system sensor histidine kinase|POSITIVE:POSITIVE|[16980,17434]|455 HSP 1 e-value: 1.0E-13 bit: 79.8 Len: 48 Query Start:213 Query End:260 Subject Strand: NEGATIVE Subject Start: 120 Subject End: 167 ....................................................................................................................................................................................................................ccccacccttacgggatggggctgaaataattcgggcttccagccctt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................ccccacccttacgggatggggctgaaataattcgggctcccggccctt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-10 bit: 69.9 Len: 39 Query Start:30 Query End:68 Subject Strand: NEGATIVE Subject Start: 192 Subject End: 230 .............................gaaccaataagaatgaatttaattcaggccttcagccct............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................gaacaaataagaatgaatttaattcaggccttcagccct............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2172_TF2174|hypothetical protein:possible endopeptidase precursor|POSITIVE:POSITIVE|[2346196,2346431]|236 HSP 1 e-value: 5.0E-13 bit: 77.8 Len: 114 Query Start:147 Query End:260 Subject Strand: NEGATIVE Subject Start: 15 Subject End: 124 ..................................................................................................................................................ctgaatactgaccgctaacgattatatcaggcttacagccctctaaccaaggtatgggcatggatcccccacccttacgggatggggctgaaataattcgggcttccagccctt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................ctgaatactgatcgctaacgatcatgtcaggcttacagccctccgaacaaggt-tggacg-gga--ccccacccttacgggatggggctgaaatatatctggcttgcagccctt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2477_TF2478|phosphatase:hypothetical protein|POSITIVE:POSITIVE|[2655026,2655514]|489 HSP 1 e-value: 8.0E-12 bit: 73.8 Len: 93 Query Start:194 Query End:286 Subject Strand: POSITIVE Subject Start: 217 Subject End: 309 .................................................................................................................................................................................................caaggtatgggcatggatcccccacccttacgggatggggctgaaataattcgggcttccagcccttgtatgccctgcgggcgttgagttgtt..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................caaggtatgggcatcgataccccaaccttatgggatggggctgaaatagatcggactttcagcctttgtgccccttgcgggcgttgagctgtt..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 8.0E-9 bit: 63.9 Len: 60 Query Start:366 Query End:425 Subject Strand: POSITIVE Subject Start: 342 Subject End: 401 .............................................................................................................................................................................................................................................................................................................................................................................tgatagctgactgctgtaaaagccctgaaagggcataataattcagcccaatgcgaagcg.......................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................................................................................................................tgatagctgaatgcttcaacagccctgaaagggcgtattaattcagcccaatgcgtagcg.......................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF0685_TF0686|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[731193,732338]|1146 HSP 1 e-value: 5.0E-10 bit: 67.9 Len: 38 Query Start:439 Query End:476 Subject Strand: NEGATIVE Subject Start: 765 Subject End: 802 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................gcatcgcatctcggcggagggctgtaagcttgacgtaa....................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................gcatcgcatctcggcggagggctgtaagcctgacgtaa....................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-9 bit: 65.9 Len: 49 Query Start:9 Query End:57 Subject Strand: NEGATIVE Subject Start: 949 Subject End: 997 ........ataaacccagattccgcaatagaaccaataagaatgaatttaattcagg.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ........ataaacccggattccgcgatagaagaaataagaatgaatttaattcagg.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF0346_TF0347|hypothetical protein:possible serine protease|POSITIVE:POSITIVE|[367377,367681]|305 HSP 1 e-value: 2.0E-9 bit: 65.9 Len: 115 Query Start:146 Query End:260 Subject Strand: NEGATIVE Subject Start: 87 Subject End: 195 .................................................................................................................................................gctgaatactgaccgctaacgattatatcaggcttacagccctctaaccaaggtatgggcatggatcccccacccttacgggatggggctgaaataattcgggcttccagccctt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................gctgaatactgaccgataa--attacatcaggcttacagccctccgaacaaggt-tggacg-gga--ccccacccttacgggatggggctgaaatatatcgggtttgcagccctt............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: tfor_TF2920_TF2921|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[3117231,3118637]|1407 HSP 1 e-value: 3.0E-8 bit: 61.9 Len: 55 Query Start:371 Query End:425 Subject Strand: NEGATIVE Subject Start: 888 Subject End: 942 ..................................................................................................................................................................................................................................................................................................................................................................................gctgactgctgtaaaagccctgaaagggcataataattcagcccaatgcgaagcg.......................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................gctgaccgttgtaagagccctgaaagggcgtattaattcagcccaatgcgcagcg.......................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 5.0E-7 bit: 58.0 Len: 49 Query Start:213 Query End:261 Subject Strand: NEGATIVE Subject Start: 1024 Subject End: 1072 ....................................................................................................................................................................................................................ccccacccttacgggatggggctgaaataattcgggcttccagcccttg.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................................................................................ccccatccttacgggatggggctgaaatataccgggctttcagcccttg.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UGAAUCAUAUAAACCCAGAUUCCGCAAUAGAACCAAUAAGAAUGAAUUUAAUUCAGGCCUUCAGCCCUUAUAAACCUCGCAGAGGCGGUGAAUUGUUAAAUUGUUGAGUUGUUGAUUCGUUGACAUGUUGAUUUGUUGGCUGACCGCUGAAUACUGACCGCUAACGAUUAUAUCAGGCUUACAGCCCUCUAACCAAGGUAUGGGCAUGGAUCCCCCACCCUUACGGGAUGGGGCUGAAAUAAUUCGGGCUUCCAGCCCUUGUAUGCCCUGCGGGCGUUGAGUUGUUGAUUCGUUGAUUUGUUGGCUGUCCUGAUUGCUGAAUGCUGACCGCUAACAAACAAUUACGAAUUACGCAAGCUGAAUACUGAUAGCUGACUGCUGUAAAAGCCCUGAAAGGGCAUAAUAAUUCAGCCCAAUGCGAAGCGUUGGGGAAAAAAAGCAUCGCAUCUCGGCGGAGGGCUGUAAGCUUGACGUAACCAUUGUCGUACAUUCGUACGUCCAUUAUUAAUGGUAAACACCGAACAGUGUAUCGCGUAAUUUGGGAUAAUAAGUAGUAACGGAUUAAAGAGGCAAUGUAGCAAAGUAUGAAGCUAAAAAAGAAAAAGAAGGAGACAAUGGAAAGGGCAUGUCAGGUGGAUCAUUUUGAAAGGCGAACACGGAAAGAAGAUAUUAAACGAAAUAUCGAGAUGGUUUUUACAGCGUGAUUCAAAACUUUUUUAAUAAUUCCACGCUCUUAAAAUAAAAAAAUUUAUUUACUUUUGCGGCGU .....................((((((.((.........((((((((((......(((.....)))...............((((((..(((((((((((.....(((((.((((.((((..(((........)))..))....(((((....(((((.(((.....(((..(((((((((((((((((...((...(((.(((((((.(..((((((((....))).)))))............((((.....)))).).)))))))))).))(((((((.(((((((((((((.(((((((((.(((......((.....)).))).)))))))))))...)))))))).((..(((((((....(((((.....)))))....((((.....))))......)))))))(((((((...))))))).........))...))).))))))))))))))))))))))))..)))((((((((.....(((((((..((((.....))))..........(((.(((.((...(((((((..((........))..)))))))..)).))).)))......))))))).((.....))...........))))))))....)))..)))))..((((((((((((.(..((......................))...).))))))))))))...))))).)).))))))))).)))))))))))..))).))).........)))))))))).)).))))))... (-233.55) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ ACGCCGCAAAAGUAAAUAAAUUUUUUUAUUUUAAGAGCGUGGAAUUAUUAAAAAAGUUUUGAAUCACGCUGUAAAAACCAUCUCGAUAUUUCGUUUAAUAUCUUCUUUCCGUGUUCGCCUUUCAAAAUGAUCCACCUGACAUGCCCUUUCCAUUGUCUCCUUCUUUUUCUUUUUUAGCUUCAUACUUUGCUACAUUGCCUCUUUAAUCCGUUACUACUUAUUAUCCCAAAUUACGCGAUACACUGUUCGGUGUUUACCAUUAAUAAUGGACGUACGAAUGUACGACAAUGGUUACGUCAAGCUUACAGCCCUCCGCCGAGAUGCGAUGCUUUUUUUCCCCAACGCUUCGCAUUGGGCUGAAUUAUUAUGCCCUUUCAGGGCUUUUACAGCAGUCAGCUAUCAGUAUUCAGCUUGCGUAAUUCGUAAUUGUUUGUUAGCGGUCAGCAUUCAGCAAUCAGGACAGCCAACAAAUCAACGAAUCAACAACUCAACGCCCGCAGGGCAUACAAGGGCUGGAAGCCCGAAUUAUUUCAGCCCCAUCCCGUAAGGGUGGGGGAUCCAUGCCCAUACCUUGGUUAGAGGGCUGUAAGCCUGAUAUAAUCGUUAGCGGUCAGUAUUCAGCGGUCAGCCAACAAAUCAACAUGUCAACGAAUCAACAACUCAACAAUUUAACAAUUCACCGCCUCUGCGAGGUUUAUAAGGGCUGAAGGCCUGAAUUAAAUUCAUUCUUAUUGGUUCUAUUGCGGAAUCUGGGUUUAUAUGAUUCA (((((...((((((((........))))))))..).))))...................(((((((...((((((..(((....((((((......))))))....(((((((...(((......(((((.....(((((.(((....((((((((..................((((..........)))).............((((((.....................))).)))(((((....))))).........))))))))(((((....)))))..((((((((..(((.(((((((((((((.((((((.(((((.((..............)).))))).(((((.(((....((((((((....((((.......(((...((((..........)))))))...((((((....(((((((.((.(((.((.....))......))).)).)))))))..))))))............))))..))))))))...((((.....)))).......)))..(((((.(((....)))))))).......)))))...))))))..))))))))))))).)))..)))))))).)))))))).(((((((..((((((...................((((.....................))))...(((((...))))).......))))))..).)))))).....)))))......))).....)))))))..))).))))))))))))) (-211.94) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 966 500 451 189 140 tfor:TF1274|5end_hypothetical_protein_1357621..1357851_POSITIVE 955 460 413 213 167 tfor:TF2641|5end_riboflavin_kinase/FAD_synthase_2809681..2809911_POSITIVE 952 490 441 108 59 tfor:TF2640|5end_hypothetical_protein_2809106..2809336_POSITIVE 948 259 211 225 177 tfor:TF1275|5end_transcription-repair_coupling_factor_1357866..1358096_POSITIVE 934 260 211 112 63 tfor:TF1516|5end_transposase_fragment_1626407..1626637_POSITIVE 908 260 213 112 65 tfor:TF2202|5end_hypothetical_protein_2378682..2378912_POSITIVE 894 500 454 89 43 tfor:TF3003|5end_hypothetical_protein_3220382..3220612_POSITIVE 880 258 213 231 186 tfor:TF3082|5end_conserved_hypothetical_protein_3316431..3316661_POSITIVE 857 460 411 176 129 tfor:TF0499|5end_hypothetical_protein_526257..526487_POSITIVE 818 420 371 199 150 tfor:TF0346|5end_hypothetical_protein_367048..367278_POSITIVE 818 420 371 199 150 tfor:TF0340|5end_hypothetical_protein_363893..364123_POSITIVE 806 430 381 231 182 tfor:TF2351|5end_acetate_kinase_2515480..2515710_POSITIVE 771 220 173 224 177 tfor:TF2796|5end_cytochrome_D_ubiquinol_oxidase,_subunit_II_2981269..2981499_POSITIVE 760 270 224 51 7 tfor:TF2665|5end_hypothetical_protein_2841973..2842203_POSITIVE 755 450 404 228 183 tfor:TF2166|5end_hypothetical_protein_2342115..2342345_POSITIVE 748 240 194 51 5 tfor:TF2668|5end_hypothetical_protein_2842471..2842701_POSITIVE 747 520 471 57 3 tfor:TF2639|5end_hypothetical_protein_2809020..2809250_POSITIVE 740 420 371 222 164 tfor:TF2439|5end_conserved_hypothetical_protein_2616380..2616610_POSITIVE 721 538 491 54 7 tfor:TF2025|5end_hypothetical_protein_2181933..2182163_POSITIVE 705 190 141 223 173 tfor:TF0341|5end_conserved_hypothetical_protein_364348..364578_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1023 460 411 143 95 tfor:TF2025|3end_hypothetical_protein_2182180..2182330_POSITIVE 966 500 451 52 3 tfor:TF2047|3end_hypothetical_protein_2210298..2210448_POSITIVE 908 260 213 48 1 tfor:TF3003|3end_hypothetical_protein_3220629..3220779_POSITIVE 877 498 451 50 3 tfor:TF0339|3end_hypothetical_protein_363747..363897_POSITIVE 816 260 213 76 29 tfor:TF2172|3end_hypothetical_protein_2346135..2346285_POSITIVE 771 420 371 111 61 tfor:TF1592|3end_hypothetical_protein_1708557..1708707_POSITIVE 771 430 387 44 1 tfor:TF0344|3end_hypothetical_protein_366963..367113_POSITIVE 769 530 481 54 5 tfor:TF0467|3end_acetyltransferase-related_protein_486543..486693_POSITIVE 750 430 387 44 1 tfor:TF1585|3end_hypothetical_protein_1690610..1690760_POSITIVE 744 420 371 111 62 tfor:TF1590|3end_hypothetical_protein_1706043..1706193_POSITIVE 707 420 371 142 93 tfor:TF1588|3end_hypothetical_protein_1702560..1702710_POSITIVE 705 470 421 70 22 tfor:TF2922|3end_surface_antigen_BspA_3121538..3121688_POSITIVE 705 190 141 52 2 tfor:TF0340|3end_hypothetical_protein_364257..364407_POSITIVE 702 460 411 65 18 tfor:TF1584|3end_hypothetical_protein_1690603..1690753_POSITIVE 700 430 385 56 1 tfor:TF0958|3end_conserved_hypothetical_protein_1004909..1005059_POSITIVE 672 58 11 93 46 tfor:TF1274|3end_hypothetical_protein_1357895..1358045_POSITIVE 663 420 371 100 46 tfor:TF2171|3end_hypothetical_protein_2345792..2345942_POSITIVE 642 460 411 63 16 tfor:TF2350|3end_hypothetical_protein_2515364..2515514_POSITIVE 641 470 421 52 3 tfor:TF0018|3end_hypothetical_protein_12091..12241_POSITIVE 637 470 421 79 28 tfor:TF1762|3end_hypothetical_protein_1899648..1899798_POSITIVE