Origin IGS: tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataagcacaagaaaactcagaccaattcgtctgagtttt .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 aaaactcagacgaattggtctgagttttcttgtgcttatactcaatgaaaatcaaagagcgaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta Mask Tandem Repeat Region ================================================ tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataagcacaagaaaactcagaccaattcgtctgagtttt Find is-nt database================================================ Query_seq: SMT_915:SMT_916|SMT_915:SMT_916:sucrose operon repressor:3-hydroxy-3-methylglutaryl-CoA reductase:-><-:868680..868819 140 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataagcacaagaaaactcagaccaattcgtctgagtttt Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: SMT_915:SMT_916|SMT_915:SMT_916:sucrose operon repressor:3-hydroxy-3-methylglutaryl-CoA reductase:-><-:868680..868819 140 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataagcacaagaaaactcagaccaattcgtctgagtttt Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: SMT_915:SMT_916|SMT_915:SMT_916:sucrose operon repressor:3-hydroxy-3-methylglutaryl-CoA reductase:-><-:868680..868819 140 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataagcacaagaaaactcagaccaattcgtctgagtttt Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataagcacaagaaaactcagaccaattcgtctgagtttt Predict ORF larger than 30AA ================================================ tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataagcacaagaaaactcagaccaattcgtctgagtttt Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataagcacaagaaaactcagaccaattcgtctgagtttt Predict TransTerm conf > 70================================================ Find igs database================================================ Query_seq: SMT_915:SMT_916|SMT_915:SMT_916:sucrose operon repressor:3-hydroxy-3-methylglutaryl-CoA reductase:-><-:868680..868819 140 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataagcacaagaaaactcagaccaattcgtctgagtttt Intra-Species Hit: Count: 44 Min: 1 Max: 140 Len: 140 Subject: smit_SMT_915_SMT_916|sucrose operon repressor:3-hydroxy-3-methylglutaryl-CoA reductase|POSITIVE:NEGATIVE|[868680,868819]|140 HSP 1 e-value: 5.0E-74 bit: 278.0 Len: 140 Query Start:1 Query End:140 Subject Strand: POSITIVE Subject Start: 1 Subject End: 140 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataagcacaagaaaactcagaccaattcgtctgagtttt tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataagcacaagaaaactcagaccaattcgtctgagtttt Subject: smit_SMT_1535_SMT_1536|exodeoxyribonuclease V alpha chain:trigger factor|POSITIVE:NEGATIVE|[1520574,1520725]|152 HSP 1 e-value: 3.0E-47 bit: 188.0 Len: 103 Query Start:1 Query End:103 Subject Strand: NEGATIVE Subject Start: 45 Subject End: 147 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgtggctagcttcctagtttgctctttgattttcattgagtat..................................... Subject: smit_SMT_1476_SMT_1477|thiol peroxidase:K02077 zinc/manganese transport system substrate-binding protein|NEGATIVE:NEGATIVE|[1459310,1459536]|227 HSP 1 e-value: 2.0E-42 bit: 172.0 Len: 107 Query Start:1 Query End:107 Subject Strand: NEGATIVE Subject Start: 121 Subject End: 227 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataagc................................. tactcttcgaaaatctcttcaaaccacgtcagcgttgccttgccgtactcaagtacagcctgtggctagcttcctagtttgctctttgattttcattgagtataagc................................. Subject: smit_SMT_1068_SMT_1069|ATP-dependent DNA helicase RecG:acetyl xylan esterase, putative|POSITIVE:POSITIVE|[1009047,1009469]|423 HSP 1 e-value: 2.0E-42 bit: 172.0 Len: 106 Query Start:1 Query End:106 Subject Strand: NEGATIVE Subject Start: 18 Subject End: 124 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. tactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagtttgctctttgattttcattgagtataag.................................. Subject: smit_SMT_833_SMT_834|hypothetical protein predicted by Glimmer/Critica:hypothetical protein|NEGATIVE:NEGATIVE|[775453,775606]|154 HSP 1 e-value: 3.0E-41 bit: 168.0 Len: 105 Query Start:1 Query End:105 Subject Strand: NEGATIVE Subject Start: 50 Subject End: 154 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... tactcttcgaaaatctcttcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................... Subject: smit_SMT_798_SMT_799|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[707167,707385]|219 HSP 1 e-value: 3.0E-41 bit: 168.0 Len: 105 Query Start:1 Query End:105 Subject Strand: NEGATIVE Subject Start: 112 Subject End: 216 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... tactcttcgaaaatctcttcaaaccacgtcagcttcaccttgccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtataa................................... Subject: smit_SMT_1670_SMT_1671|K02030 polar amino acid transport system substrate-binding protein:hypothetical protein|POSITIVE:NEGATIVE|[1659356,1659481]|126 HSP 1 e-value: 5.0E-40 bit: 165.0 Len: 102 Query Start:1 Query End:102 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 103 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagta...................................... tactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagtttgctctttgattttcattgagta...................................... Subject: smit_SMT_482_SMT_483|hypothetical protein predicted by Glimmer/Critica:transcriptional activator TipA, putative|NEGATIVE:POSITIVE|[418627,418966]|340 HSP 1 e-value: 5.0E-40 bit: 165.0 Len: 106 Query Start:1 Query End:106 Subject Strand: POSITIVE Subject Start: 225 Subject End: 331 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. tactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtataag.................................. Subject: smit_SMT_1963_SMT_1964|ribonuclease BN, putative:sodium/hydrogen exchanger family protein|NEGATIVE:NEGATIVE|[1896553,1896685]|133 HSP 1 e-value: 7.0E-39 bit: 161.0 Len: 106 Query Start:1 Query End:106 Subject Strand: NEGATIVE Subject Start: 23 Subject End: 129 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. tactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcatkgagtataag.................................. Subject: smit_SMT_1766_SMT_1767|sucrose-6-phosphate hydrolase:oxidoreductase, short chain dehydrogenase/reductase family|POSITIVE:NEGATIVE|[1743162,1743332]|171 HSP 1 e-value: 1.0E-37 bit: 157.0 Len: 106 Query Start:1 Query End:106 Subject Strand: POSITIVE Subject Start: 8 Subject End: 114 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. tactcttcgaaaatcaaattcaaaccacgtcagcgtcgcctcaccgtactcaagtacagcttgcgactagcttcctagtttgctctttgattttcattgagtataag.................................. Subject: smit_SMT_1139_SMT_1140|rRNA (guanine-N1-)-methyltransferase:glycogen phosphorylase|POSITIVE:NEGATIVE|[1080744,1081405]|662 HSP 1 e-value: 3.0E-35 bit: 149.0 Len: 106 Query Start:1 Query End:106 Subject Strand: NEGATIVE Subject Start: 556 Subject End: 662 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. tactcttcgaaaatcaaattcaaaccacgtcagcgttgccttgccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtataag.................................. Subject: smit_SMT_1809_SMT_1810|MutT/NUDIX family protein:hypothetical protein|POSITIVE:POSITIVE|[1785195,1785358]|164 HSP 1 e-value: 1.0E-34 bit: 147.0 Len: 105 Query Start:1 Query End:105 Subject Strand: POSITIVE Subject Start: 1 Subject End: 106 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... tactcttcgaaaatcaaattcaaaccacgtcagcttcgccttgccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtataa................................... Subject: smit_SMT_1849_SMT_1850|hypothetical protein:K01421 putative membrane protein|POSITIVE:POSITIVE|[1813865,1815201]|1337 HSP 1 e-value: 7.0E-33 bit: 141.0 Len: 103 Query Start:1 Query End:103 Subject Strand: NEGATIVE Subject Start: 257 Subject End: 359 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... tactcttcgaaaatctcttcaaaccacgtcagcttcgccttgccgtactcaagtactgactacggctagcttcctagtttgatctttgattttcattgagtat..................................... Subject: smit_SMT_1534_SMT_1535|signal peptidase I:exodeoxyribonuclease V alpha chain|POSITIVE:POSITIVE|[1517973,1518206]|234 HSP 1 e-value: 3.0E-32 bit: 139.0 Len: 105 Query Start:1 Query End:105 Subject Strand: NEGATIVE Subject Start: 97 Subject End: 202 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... tactcttcgaaaatcaaattcaaaccacgtcagtttcgccttgccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtataa................................... Subject: smit_SMT_1393_SMT_1394|hypothetical protein:hypothetical protein predicted by Glimmer/Critica|POSITIVE:POSITIVE|[1369621,1370215]|595 HSP 1 e-value: 3.0E-32 bit: 139.0 Len: 105 Query Start:1 Query End:105 Subject Strand: POSITIVE Subject Start: 153 Subject End: 258 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................... Subject: smit_SMT_1138_SMT_1139|hypothetical protein:rRNA (guanine-N1-)- methyltransferase|NEGATIVE:POSITIVE|[1079638, 1079894]|257 HSP 1 e-value: 3.0E-32 bit: 139.0 Len: 105 Query Start:1 Query End:105 Subject Strand: NEGATIVE Subject Start: 73 Subject End: 178 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................... Subject: smit_SMT_662_SMT_663|A/G-specific adenine glycosylase:phosphate acetyltransferase|NEGATIVE:NEGATIVE|[573918,574105]|188 HSP 1 e-value: 3.0E-32 bit: 139.0 Len: 105 Query Start:1 Query End:105 Subject Strand: POSITIVE Subject Start: 50 Subject End: 155 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................... Subject: smit_SMT_826_SMT_827|hypothetical protein:hypothetical protein|NEGATIVE:POSITIVE|[750113,750528]|416 HSP 1 e-value: 1.0E-31 bit: 137.0 Len: 108 Query Start:1 Query End:108 Subject Strand: POSITIVE Subject Start: 106 Subject End: 214 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataagca................................ tactcttcgaaaatcaaattcaaaccacgtcagcttcgccttgccgtactccagtacaacctgcggctagcttcctagtttgctctttgattttcattgagtataagca................................ Subject: smit_SMT_1601_SMT_1602|hypothetical protein predicted by Glimmer/Critica:hypothetical protein|POSITIVE:POSITIVE|[1592204,1592524]|321 HSP 1 e-value: 4.0E-31 bit: 135.0 Len: 103 Query Start:1 Query End:103 Subject Strand: POSITIVE Subject Start: 192 Subject End: 295 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat..................................... Subject: smit_SMT_2108_SMT_2109|adenylosuccinate lyase:hypothetical protein predicted by Glimmer/Critica|NEGATIVE:NEGATIVE|[1998942,1999150]|209 HSP 1 e-value: 2.0E-30 bit: 133.0 Len: 106 Query Start:1 Query End:106 Subject Strand: NEGATIVE Subject Start: 103 Subject End: 209 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. tactcttcgaaaatcaaattcaaaccacgtcagcttcgccttgccgtactcaagtacagcctgtggctagctttctagtttgctctttgattttcattgagtataag.................................. Subject: smit_SMT_1179_SMT_1180|aldose 1-epimerase:putative tagatose-6-phosphate aldose/ketose isomerase|NEGATIVE:NEGATIVE|[1137945,1138125]|181 HSP 1 e-value: 2.0E-30 bit: 133.0 Len: 106 Query Start:1 Query End:106 Subject Strand: NEGATIVE Subject Start: 75 Subject End: 181 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. tactcttcgaaaatcaaattcaaaccacgtcagcttcgccttgccgtactcaagtacagcctgtggctagctttctagtttgctctttgattttcattgagtataag.................................. Subject: smit_SMT_890_SMT_891|K02029 polar amino acid transport system permease protein:oxidoreductase, putative|POSITIVE:POSITIVE|[837753,837989]|237 HSP 1 e-value: 7.0E-30 bit: 131.0 Len: 105 Query Start:1 Query End:105 Subject Strand: POSITIVE Subject Start: 1 Subject End: 106 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... tactcttcgaaaatcaaattcaaaccacgtcagcttcaccttgccgtactcaagtacagcctgcgtctagcttcctagtttgctctttgattttcattgagtataa................................... Subject: smit_SMT_259_SMT_260|dipeptide/tripeptide permease:phage transcriptional repressor|POSITIVE:POSITIVE|[199242,199609]|368 HSP 1 e-value: 7.0E-30 bit: 131.0 Len: 105 Query Start:1 Query End:105 Subject Strand: POSITIVE Subject Start: 105 Subject End: 210 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... tactcttcgaaaatcaaattcaaaccgcgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................... Subject: smit_SMT_698_SMT_699|uracil permease:K03106 signal recognition particle, subunit SRP54|POSITIVE:NEGATIVE|[609830,610030]|201 HSP 1 e-value: 1.0E-28 bit: 127.0 Len: 103 Query Start:1 Query End:103 Subject Strand: POSITIVE Subject Start: 1 Subject End: 104 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgttctttgattttcattgagtat..................................... Subject: smit_SMT_1689_SMT_1690|PTS enzyme, maltose-and glucose-specific, factor II homologue:K06148 ATP-binding cassette, subfamily C, bacterial|POSITIVE:NEGATIVE|[1673200,1673459]|260 HSP 1 e-value: 2.0E-27 bit: 123.0 Len: 102 Query Start:1 Query End:102 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 102 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagta...................................... tactcttcgaaaatctcttcaaaccatgccagcttcgccttggcgtactcaagtatagcctgcgcctagcttcccagtttgctctttgattttcattgagta...................................... Subject: smit_SMT_1781_SMT_1782|transcriptional regulator, xre family:hypothetical protein|POSITIVE:POSITIVE|[1759357,1759659]|303 HSP 1 e-value: 3.0E-26 bit: 119.0 Len: 103 Query Start:1 Query End:103 Subject Strand: POSITIVE Subject Start: 177 Subject End: 280 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... tactcttcgaaaatcaaattcaaactacgtcagcttcaccttgccgtactcaagtacagccttcggctagcttcctagtttgctctttgattttcattgagtat..................................... Subject: smit_SMT_1487_SMT_1488|hypothetical protein:K06147 ATP-binding cassette, subfamily B, bacterial|POSITIVE:POSITIVE|[1467137,1467296]|160 HSP 1 e-value: 6.0E-24 bit: 111.0 Len: 103 Query Start:1 Query End:103 Subject Strand: POSITIVE Subject Start: 19 Subject End: 122 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... tactcttcgaaaatcaaattcaaactgcgtcaacgtcgccttgccgtactcgagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat..................................... Subject: smit_SMT_1554_SMT_1555|isoleucyl-tRNA synthetase:hypothetical protein|POSITIVE:NEGATIVE|[1539973,1540312]|340 HSP 1 e-value: 4.0E-22 bit: 105.0 Len: 105 Query Start:1 Query End:105 Subject Strand: POSITIVE Subject Start: 150 Subject End: 254 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... tacttttcgaaaatctcttcaaactacgtcaatgtcgcctcactgtacttcagcacagcttgcgactagcttcctagtttgctttttgattttcatttagtataa................................... Subject: smit_SMT_1814_SMT_1815|amino acid transporter:K02035 peptide/nickel transport system substrate-binding protein|POSITIVE:NEGATIVE|[1788701,1788988]|288 HSP 1 e-value: 2.0E-17 bit: 89.7 Len: 53 Query Start:56 Query End:108 Subject Strand: NEGATIVE Subject Start: 63 Subject End: 115 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtataagca................................ .......................................................cagcctgcggctagcttcctagtttgctctttgattttcattgagtataagca................................ HSP 2 e-value: 4.0E-16 bit: 85.7 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 216 Subject End: 262 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgttgccttaccgta............................................................................................. Subject: smit_SMT_763_SMT_764|alpha-amylase:alanyl-tRNA synthetase|POSITIVE:NEGATIVE|[669341,669584]|244 HSP 1 e-value: 1.0E-15 bit: 83.8 Len: 50 Query Start:56 Query End:105 Subject Strand: NEGATIVE Subject Start: 84 Subject End: 133 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... .......................................................cagcctgcggctagcttcctagtttgctctttgattttcattgagtataa................................... HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 190 Subject End: 236 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaacaacgtcagcttcaccttgccgta............................................................................................. Subject: smit_SMT_1871_SMT_1872|modification methylase, HemK family:K03217 preprotein translocase YidC subunit|NEGATIVE:NEGATIVE|[1830592,1830972]|381 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 291 Subject End: 337 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcttcgccttgccgta............................................................................................. HSP 2 e-value: 8.0E-11 bit: 67.9 Len: 48 Query Start:56 Query End:103 Subject Strand: NEGATIVE Subject Start: 144 Subject End: 191 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... .......................................................cagcctgcgactagcttcctagtttgctctttgattttcattgagkat..................................... Subject: smit_SMT_1569_SMT_1570|dihydroxy-acid dehydratase:hypothetical protein|POSITIVE:NEGATIVE|[1563129,1563339]|211 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 6 Subject End: 52 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcaacgtcgccttgccgta............................................................................................. HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 43 Query Start:61 Query End:103 Subject Strand: POSITIVE Subject Start: 112 Subject End: 154 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagtttcctagtttgttctttgattttcattgagtat..................................... Subject: smit_SMT_1356_SMT_1357|fibronectin-binding protein-like protein A:endo-beta-N- acetylglucosaminidase|POSITIVE:NEGATIVE|[1334330, 1334539]|210 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 50 Subject End: 92 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 1.0E-12 bit: 73.8 Len: 41 Query Start:1 Query End:41 Subject Strand: NEGATIVE Subject Start: 158 Subject End: 198 tactcttcgaaaatctcttcaaaccacgtcagcgtcgcctt................................................................................................... tactcttcgaaaatctcttcaaaccacgtcagcgtctcctt................................................................................................... Subject: smit_SMT_1144_SMT_1145|K02026 multiple sugar transport system permease protein:maltodextrose utilization protein MalA|POSITIVE:POSITIVE|[1089205,1089465]|261 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:61 Query End:103 Subject Strand: POSITIVE Subject Start: 99 Subject End: 141 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 8.0E-8 bit: 58.0 Len: 33 Query Start:1 Query End:33 Subject Strand: POSITIVE Subject Start: 29 Subject End: 61 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaacctcttcaaaccacgtcagc........................................................................................................... Subject: smit_SMT_1075_SMT_1076|hypothetical protein:2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase / dihydroneopterin aldolase|POSITIVE:NEGATIVE|[1013931,1014090]|160 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:56 Query End:102 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 47 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagta...................................... .......................................................cagcctgcggctagcttcctagtttgctctttgattttcattgagta...................................... HSP 2 e-value: 3.0E-10 bit: 65.9 Len: 33 Query Start:1 Query End:33 Subject Strand: NEGATIVE Subject Start: 80 Subject End: 112 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: smit_SMT_1026_SMT_1027|sucrose phosphorylase:K02026 multiple sugar transport system permease protein|NEGATIVE:NEGATIVE|[962415,962730]|316 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:61 Query End:103 Subject Strand: POSITIVE Subject Start: 136 Subject End: 178 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 8.0E-8 bit: 58.0 Len: 33 Query Start:1 Query End:33 Subject Strand: POSITIVE Subject Start: 67 Subject End: 99 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaatcacgtcagc........................................................................................................... Subject: smit_SMT_775_SMT_776|alpha-acetolactate decarboxylase:hypothetical protein|NEGATIVE:POSITIVE|[686063,686341]|279 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 107 Subject End: 153 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcttcgccttgccgta............................................................................................. HSP 2 e-value: 8.0E-8 bit: 58.0 Len: 45 Query Start:61 Query End:105 Subject Strand: NEGATIVE Subject Start: 16 Subject End: 60 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataa................................... ............................................................tgcggctcgctkcmtagtttgctttttgattttcattgagtataa................................... Subject: smit_SMT_365_SMT_366|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[301808,302224]|417 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 245 Subject End: 291 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgttgccttgccgta............................................................................................. HSP 2 e-value: 5.0E-12 bit: 71.9 Len: 48 Query Start:56 Query End:103 Subject Strand: POSITIVE Subject Start: 347 Subject End: 394 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... .......................................................cagcctgcggccagcttcctagtttgctctttgattttcattgagtat..................................... Subject: smit_SMT_319_SMT_320|K02356 elongation factor EF-P:alcohol dehydrogenase, zinc-containing|NEGATIVE:NEGATIVE|[258955,259330]|376 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 264 Subject End: 310 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgtcacgttaccgta............................................................................................. HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 161 Subject End: 203 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggcttgcttcctagtttgctctttgatttccattgagtat..................................... Subject: smit_SMT_1216_SMT_1217|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[1176030,1176255]|226 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 45 Query Start:61 Query End:105 Subject Strand: POSITIVE Subject Start: 151 Subject End: 195 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataa................................... ............................................................tgcggctagtttcctagtttgctctttgattttcattgagtataa................................... HSP 2 e-value: 8.0E-11 bit: 67.9 Len: 46 Query Start:2 Query End:47 Subject Strand: POSITIVE Subject Start: 1 Subject End: 46 .actcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. .actcttcgaaaatctctccaaaccacgtcaacgtcgccttgccgta............................................................................................. Subject: smit_SMT_235_SMT_236|hypothetical protein:ribosomal small subunit pseudouridine synthase A|POSITIVE:POSITIVE|[174452,174764]|313 HSP 1 e-value: 5.0E-12 bit: 71.9 Len: 48 Query Start:56 Query End:103 Subject Strand: NEGATIVE Subject Start: 14 Subject End: 61 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... .......................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 206 Subject End: 252 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcaaaaatctcttcaaaccgcgtcaacgtcgccttgccgta............................................................................................. Subject: smit_SMT_1591_SMT_1592|DNA-entry nuclease:putative hemolysin|POSITIVE:POSITIVE|[1579529,1579794]|266 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 81 Subject End: 123 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagcttcctagtttgcactttgattttcattgagtat..................................... HSP 2 e-value: 3.0E-10 bit: 65.9 Len: 33 Query Start:1 Query End:33 Subject Strand: NEGATIVE Subject Start: 160 Subject End: 192 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: smit_SMT_495_SMT_496|bacterial peptide chain release factor 2 (RF-2):superoxide dismutase, manganese-dependent|POSITIVE:POSITIVE|[430114, 430572]|459 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 43 Query Start:63 Query End:105 Subject Strand: NEGATIVE Subject Start: 157 Subject End: 199 ..............................................................cggctagcttcctagttcgctctttgattttcattgagtataa................................... ..............................................................cggctagtttcctagtttgctctttgattttcattgagtataa................................... HSP 2 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 307 Subject End: 353 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccgcgtcaacgtcgccttgccgta............................................................................................. Subject: smit_SMT_451_SMT_452|thiamine-phosphate pyrophosphorylase:phosphomethylpyrimidine kinase|POSITIVE:NEGATIVE|[389708,389866]|159 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 4 Subject End: 46 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcgactagcttcctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 8.0E-8 bit: 58.0 Len: 33 Query Start:1 Query End:33 Subject Strand: NEGATIVE Subject Start: 83 Subject End: 115 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaacgacgtcagc........................................................................................................... Inter-species Hit: Count: 131 Min: 1 Max: 114 Len: 114 Subject: NC_003028_SP_0292_SP_0293|bifunctional folate synthesis protein:hypothetical protein|POSITIVE:NEGATIVE|[271230,271378]|149 HSP 1 e-value: 5.0E-49 bit: 194.0 Len: 102 Query Start:1 Query End:102 Subject Strand: POSITIVE Subject Start: 48 Subject End: 149 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagta...................................... tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagtttgctctttgattttcattgagta...................................... Subject: NC_003028_SP_2183_SP_2184|hypothetical protein:glycerol uptake facilitator protein|NEGATIVE:NEGATIVE|[2101749,2102044]|296 HSP 1 e-value: 1.0E-40 bit: 167.0 Len: 103 Query Start:1 Query End:103 Subject Strand: NEGATIVE Subject Start: 189 Subject End: 292 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... tactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagtttgctctttgattttcattgagtat..................................... Subject: NC_008533_SPD_0260_SPD_0261|ribosomal small subunit pseudouridine synthase A:aminopeptidase C|POSITIVE:POSITIVE|[258814,259029]|216 HSP 1 e-value: 5.0E-40 bit: 165.0 Len: 103 Query Start:1 Query End:103 Subject Strand: NEGATIVE Subject Start: 10 Subject End: 112 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... tactcttcgaaaatctcttcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat..................................... Subject: NC_003028_SP_1306_SP_1307|glutamate dehydrogenase:hypothetical protein|POSITIVE:NEGATIVE|[1233949,1234453]|505 HSP 1 e-value: 2.0E-36 bit: 153.0 Len: 105 Query Start:1 Query End:105 Subject Strand: NEGATIVE Subject Start: 218 Subject End: 322 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... tactctttgaaaatctcttcaaaccacgtcagctttgctttaccgtactcaagtacagcctgcggctcgcttcctagtttgctctttgattttcattgagtataa................................... Subject: NC_008533_SPD_0710_SPD_0711|septation ring formation regulator EzrA:hypothetical protein|POSITIVE:POSITIVE|[727105,727897]|793 HSP 1 e-value: 3.0E-35 bit: 149.0 Len: 103 Query Start:1 Query End:103 Subject Strand: POSITIVE Subject Start: 136 Subject End: 238 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... tactcttcgaaaatctcttcaaatcacgtcagcgtcgccttaccgtactcaagtacagcctgaggctagcttcttagtttgctttttgattttcatttagtat..................................... Subject: NC_003028_SP_1180_SP_1181|ribonucleotide-diphosphate reductase beta subunit:hypothetical protein|POSITIVE:NEGATIVE|[1119540,1119753]|214 HSP 1 e-value: 1.0E-34 bit: 147.0 Len: 105 Query Start:1 Query End:105 Subject Strand: POSITIVE Subject Start: 1 Subject End: 106 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... tactcttcgaaaatcaaattcaaaccacgtcagcttcgccttgccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtataa................................... Subject: NC_008533_SPD_1158_SPD_1159|NADP-specific glutamate dehydrogenase:hypothetical protein|POSITIVE:NEGATIVE|[1188350,1188844]|495 HSP 1 e-value: 4.0E-34 bit: 145.0 Len: 105 Query Start:1 Query End:105 Subject Strand: NEGATIVE Subject Start: 208 Subject End: 312 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... tactctttgaaaatctcttcaaaccacgtcagctttgccttgccgtactcaagtacagcctgcgactcgcttcctagtttgctctttgattttcattgagtataa................................... Subject: NC_003098_spr1181_spr1182|glutamate dehydrogenase:hypothetical protein|POSITIVE:NEGATIVE|[1180819,1181313]|495 HSP 1 e-value: 4.0E-34 bit: 145.0 Len: 105 Query Start:1 Query End:105 Subject Strand: NEGATIVE Subject Start: 208 Subject End: 312 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... tactctttgaaaatctcttcaaaccacgtcagctttgccttgccgtactcaagtacagcctgcgactcgcttcctagtttgctctttgattttcattgagtataa................................... Subject: NC_003028_SP_0807_SP_0809|septation ring formation regulator EzrA:hypothetical protein|POSITIVE:POSITIVE|[764244,764778]|535 HSP 1 e-value: 7.0E-33 bit: 141.0 Len: 103 Query Start:1 Query End:103 Subject Strand: POSITIVE Subject Start: 136 Subject End: 238 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... tactcttcgaaaatcttttcaaatcacgtcagcgtcgccttaccgtactcaagtacagcctgaggctagcttcttagtttgctttttgattttcatttagtat..................................... Subject: NC_003028_SP_0280_SP_0281|ribosomal small subunit pseudouridine synthase A:aminopeptidase C|POSITIVE:POSITIVE|[258312,258528]|217 HSP 1 e-value: 4.0E-31 bit: 135.0 Len: 103 Query Start:1 Query End:103 Subject Strand: NEGATIVE Subject Start: 10 Subject End: 113 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat..................................... Subject: NC_003028_SP_1472_SP_1473|oxidoreductase, putative:hypothetical protein|POSITIVE:NEGATIVE|[1386055,1386276]|222 HSP 1 e-value: 3.0E-29 bit: 129.0 Len: 104 Query Start:1 Query End:104 Subject Strand: NEGATIVE Subject Start: 115 Subject End: 219 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtata.................................... tactcttcgaaaatcaaattcaaaccacgtcagcttcaccttgccgtacttaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtata.................................... Subject: NC_008533_SPD_1551_SPD_1552|prevent-host-death family protein:hypothetical protein|NEGATIVE:NEGATIVE|[1574500,1574730]|231 HSP 1 e-value: 2.0E-27 bit: 123.0 Len: 105 Query Start:1 Query End:105 Subject Strand: NEGATIVE Subject Start: 85 Subject End: 190 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... tactcttcgaaaatcaaattcaaatcgcgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................... Subject: NC_008533_SPD_0546_SPD_0547|branched-chain amino acid transport system II carrier protein:hypothetical protein|POSITIVE:POSITIVE|[559539,559741]|203 HSP 1 e-value: 2.0E-27 bit: 123.0 Len: 105 Query Start:1 Query End:105 Subject Strand: POSITIVE Subject Start: 8 Subject End: 113 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... tactcttcgaaaatcaaattcaaaccgcgtcaacgtcgccttgtcgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................... Subject: NC_003098_spr1586_spr1587|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1567002,1567199]|198 HSP 1 e-value: 2.0E-27 bit: 123.0 Len: 105 Query Start:1 Query End:105 Subject Strand: NEGATIVE Subject Start: 52 Subject End: 157 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... tactcttcgaaaatcaaattcaaatcgcgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................... Subject: NC_003098_spr0551_spr0552|Branched-chain amino acid transport system carrier protein:hypothetical protein|POSITIVE:POSITIVE|[552009,552211]|203 HSP 1 e-value: 2.0E-27 bit: 123.0 Len: 105 Query Start:1 Query End:105 Subject Strand: POSITIVE Subject Start: 8 Subject End: 113 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... tactcttcgaaaatcaaattcaaaccgcgtcaacgtcgccttgtcgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................... Subject: NC_003028_SP_1741_SP_1742|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1645558,1645794]|237 HSP 1 e-value: 2.0E-27 bit: 123.0 Len: 105 Query Start:1 Query End:105 Subject Strand: NEGATIVE Subject Start: 91 Subject End: 196 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... tactcttcgaaaatcaaattcaaatcgcgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................... Subject: NC_008533_SPD_0991_SPD_0992|ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[1002301,1002645]|345 HSP 1 e-value: 4.0E-19 bit: 95.6 Len: 103 Query Start:1 Query End:103 Subject Strand: POSITIVE Subject Start: 146 Subject End: 249 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... tactcttcgaaaatcaaattcaaaccacgtcaatttcaccttgccgtactcaagtacagcctgcggctaacttcctagtttgcactttaattttcattgagtat..................................... Subject: NC_003098_spr1014_spr1015|50S ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[994770,995114]|345 HSP 1 e-value: 4.0E-19 bit: 95.6 Len: 103 Query Start:1 Query End:103 Subject Strand: POSITIVE Subject Start: 146 Subject End: 249 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... tactcttcgaaaatcaaattcaaaccacgtcaatttcaccttgccgtactcaagtacagcctgcggctaacttcctagtttgcactttaattttcattgagtat..................................... Subject: NC_008533_SPD_0790_SPD_0791|pyruvate kinase:hypothetical protein|POSITIVE:NEGATIVE|[809280,810395]|1116 HSP 1 e-value: 1.0E-18 bit: 93.7 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 103 Subject End: 149 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. HSP 2 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:61 Query End:103 Subject Strand: POSITIVE Subject Start: 209 Subject End: 251 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtat..................................... Subject: NC_008533_SPD_0569_SPD_0570|sodium/hydrogen exchanger family protein:ribonuclease BN, putative|POSITIVE:POSITIVE|[591916,592093]|178 HSP 1 e-value: 1.0E-18 bit: 93.7 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 5 Subject End: 51 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. HSP 2 e-value: 4.0E-16 bit: 85.7 Len: 51 Query Start:56 Query End:106 Subject Strand: POSITIVE Subject Start: 106 Subject End: 156 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. .......................................................cagcttgcggctagctttctagtttgctctttgattttcattgagtataag.................................. Subject: NC_003098_spr1924_spr1925|aspartyl-tRNA synthetase:hypothetical protein|NEGATIVE:NEGATIVE|[1908629,1908979]|351 HSP 1 e-value: 1.0E-18 bit: 93.7 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 123 Subject End: 169 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. HSP 2 e-value: 5.0E-15 bit: 81.8 Len: 45 Query Start:61 Query End:105 Subject Strand: POSITIVE Subject Start: 275 Subject End: 319 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataa................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtataa................................... Subject: NC_003098_spr0797_spr0798|pyruvate kinase:hypothetical protein|POSITIVE:NEGATIVE|[801749,802864]|1116 HSP 1 e-value: 1.0E-18 bit: 93.7 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 103 Subject End: 149 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. HSP 2 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:61 Query End:103 Subject Strand: POSITIVE Subject Start: 209 Subject End: 251 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtat..................................... Subject: NC_003098_spr0573_spr0574|Na+/H+ antiporter:hypothetical protein|POSITIVE:POSITIVE|[584385,584547]|163 HSP 1 e-value: 1.0E-18 bit: 93.7 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 5 Subject End: 51 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. HSP 2 e-value: 4.0E-16 bit: 85.7 Len: 51 Query Start:56 Query End:106 Subject Strand: POSITIVE Subject Start: 106 Subject End: 156 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. .......................................................cagcttgcggctagctttctagtttgctctttgattttcattgagtataag.................................. Subject: NC_003028_SP_2114_SP_2115|aspartyl-tRNA synthetase:hypothetical protein|NEGATIVE:NEGATIVE|[2029292,2029642]|351 HSP 1 e-value: 1.0E-18 bit: 93.7 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 123 Subject End: 169 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. HSP 2 e-value: 5.0E-15 bit: 81.8 Len: 45 Query Start:61 Query End:105 Subject Strand: POSITIVE Subject Start: 275 Subject End: 319 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataa................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtataa................................... Subject: NC_003028_SP_1696_SP_1697|hypothetical protein:ATP-dependent DNA helicase RecG|NEGATIVE:NEGATIVE|[1600719,1600952]|234 HSP 1 e-value: 1.0E-18 bit: 93.7 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 19 Subject End: 65 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. HSP 2 e-value: 3.0E-13 bit: 75.8 Len: 46 Query Start:61 Query End:106 Subject Strand: POSITIVE Subject Start: 172 Subject End: 217 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. ............................................................tgcggttagcttcctagtttgctctttgattttcattgagtataag.................................. Subject: NC_003028_SP_1199_SP_1200|hypothetical protein:GTP-binding protein LepA|NEGATIVE:NEGATIVE|[1132042,1132583]|542 HSP 1 e-value: 1.0E-18 bit: 93.7 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 406 Subject End: 452 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. HSP 2 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 260 Subject End: 302 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtat..................................... Subject: NC_003028_SP_0897_SP_0899|pyruvate kinase:hypothetical protein|POSITIVE:POSITIVE|[852843,854645]|1803 HSP 1 e-value: 1.0E-18 bit: 93.7 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 99 Subject End: 145 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. HSP 2 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:61 Query End:103 Subject Strand: POSITIVE Subject Start: 205 Subject End: 247 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtat..................................... Subject: NC_003028_SP_0655_SP_0657|sodium/hydrogen exchanger family protein:ribonuclease BN, putative|POSITIVE:POSITIVE|[627719,627896]|178 HSP 1 e-value: 1.0E-18 bit: 93.7 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 5 Subject End: 51 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. HSP 2 e-value: 4.0E-16 bit: 85.7 Len: 51 Query Start:56 Query End:106 Subject Strand: POSITIVE Subject Start: 106 Subject End: 156 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. .......................................................cagcttgcggctagctttctagtttgctctttgattttcattgagtataag.................................. Subject: NC_008533_SPD_0549_SPD_0550|lipoprotein, putative:ribosomal protein L11|POSITIVE:POSITIVE|[561971,562278]|308 HSP 1 e-value: 9.0E-17 bit: 87.7 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 1 Subject End: 44 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttacc................................................................................................ tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttacc................................................................................................ HSP 2 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:56 Query End:102 Subject Strand: POSITIVE Subject Start: 137 Subject End: 183 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagta...................................... .......................................................cagcctgcggctagcttcctagtttgctctttgattttcattgagta...................................... Subject: NC_008533_SPD_0409_SPD_0410|threonine dehydratase:hypothetical protein|POSITIVE:POSITIVE|[410381,411114]|734 HSP 1 e-value: 9.0E-17 bit: 87.7 Len: 48 Query Start:59 Query End:106 Subject Strand: POSITIVE Subject Start: 141 Subject End: 188 ..........................................................cttgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. ..........................................................cttgcggctagcttcctagtttgctctttgattttcattgagtataag.................................. HSP 2 e-value: 8.0E-8 bit: 58.0 Len: 29 Query Start:1 Query End:29 Subject Strand: POSITIVE Subject Start: 74 Subject End: 102 tactcttcgaaaatctcttcaaaccacgt............................................................................................................... tactcttcgaaaatctcttcaaaccacgt............................................................................................................... Subject: NC_003098_spr0554_spr0555|hypothetical protein:50S ribosomal protein L11|POSITIVE:POSITIVE|[554441,554748]|308 HSP 1 e-value: 9.0E-17 bit: 87.7 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 1 Subject End: 44 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttacc................................................................................................ tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttacc................................................................................................ HSP 2 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:56 Query End:102 Subject Strand: POSITIVE Subject Start: 137 Subject End: 183 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagta...................................... .......................................................cagcctgcggctagcttcctagtttgctctttgattttcattgagta...................................... Subject: NC_003098_spr0406_spr0407|threonine dehydratase:hypothetical protein|POSITIVE:POSITIVE|[402852,403585]|734 HSP 1 e-value: 9.0E-17 bit: 87.7 Len: 48 Query Start:59 Query End:106 Subject Strand: POSITIVE Subject Start: 141 Subject End: 188 ..........................................................cttgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. ..........................................................cttgcggctagcttcctagtttgctctttgattttcattgagtataag.................................. HSP 2 e-value: 8.0E-8 bit: 58.0 Len: 29 Query Start:1 Query End:29 Subject Strand: POSITIVE Subject Start: 74 Subject End: 102 tactcttcgaaaatctcttcaaaccacgt............................................................................................................... tactcttcgaaaatctcttcaaaccacgt............................................................................................................... Subject: NC_003028_SP_1680_SP_1681|hypothetical protein:sugar ABC transporter, permease protein|NEGATIVE:NEGATIVE|[1579923,1580193]|271 HSP 1 e-value: 9.0E-17 bit: 87.7 Len: 104 Query Start:1 Query End:104 Subject Strand: NEGATIVE Subject Start: 168 Subject End: 271 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtata.................................... tactctgcgaaaatctcttcaaactacgtcagcttcaccttgccatacttaagtattgcctgcggttagcttcctagtttgttcttcaattttcattgagtata.................................... Subject: NC_003028_SP_1107_SP_1108|50S ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[1038201,1038545]|345 HSP 1 e-value: 9.0E-17 bit: 87.7 Len: 103 Query Start:1 Query End:103 Subject Strand: POSITIVE Subject Start: 146 Subject End: 249 tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... tactcttcgaaaatcaaattcaaaccatgtcaatttcaccttgccgtactcaagtacagcctgcggctaacttcctagtttgcactttaattttcattgagtat..................................... Subject: NC_003028_SP_0629_SP_0630|hypothetical protein:50S ribosomal protein L11|POSITIVE:POSITIVE|[596487,596794]|308 HSP 1 e-value: 9.0E-17 bit: 87.7 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 1 Subject End: 44 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttacc................................................................................................ tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttacc................................................................................................ HSP 2 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:56 Query End:102 Subject Strand: POSITIVE Subject Start: 137 Subject End: 183 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagta...................................... .......................................................cagcctgcggctagcttcctagtttgctctttgattttcattgagta...................................... Subject: NC_003028_SP_0450_SP_0451|threonine dehydratase:hypothetical protein|POSITIVE:POSITIVE|[422944,423677]|734 HSP 1 e-value: 9.0E-17 bit: 87.7 Len: 48 Query Start:59 Query End:106 Subject Strand: POSITIVE Subject Start: 141 Subject End: 188 ..........................................................cttgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. ..........................................................cttgcggctagcttcctagtttgctctttgattttcattgagtataag.................................. HSP 2 e-value: 8.0E-8 bit: 58.0 Len: 29 Query Start:1 Query End:29 Subject Strand: POSITIVE Subject Start: 74 Subject End: 102 tactcttcgaaaatctcttcaaaccacgt............................................................................................................... tactcttcgaaaatctcttcaaaccacgt............................................................................................................... Subject: NC_008533_SPD_1193_SPD_1194|peptide methionine sulfoxide reductase msrA/msrB 1:homoserine kinase|NEGATIVE:NEGATIVE|[1222081,1222375]|295 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 33 Subject End: 79 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgtcaccttaccgta............................................................................................. HSP 2 e-value: 1.0E-15 bit: 83.8 Len: 50 Query Start:56 Query End:105 Subject Strand: POSITIVE Subject Start: 180 Subject End: 229 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... .......................................................cagcctgcggctagcttcctagtttgctctttgattttcattgagtataa................................... Subject: NC_008533_SPD_0527_SPD_0528|oxidoreductase, putative:amino acid ABC transporter, permease protein|NEGATIVE:NEGATIVE|[539375,539631]|257 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 47 Query Start:59 Query End:105 Subject Strand: NEGATIVE Subject Start: 144 Subject End: 190 ..........................................................cttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... ..........................................................cttgcggctagcttcctagtttgctctttgattttcattgagtataa................................... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 32 Query Start:2 Query End:33 Subject Strand: NEGATIVE Subject Start: 225 Subject End: 256 .actcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... .actcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_003098_spr1922_spr1923|Maltose operon transcriptional repressor:hypothetical protein|POSITIVE:NEGATIVE|[1905655,1905945]|291 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 238 Subject End: 284 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tacttttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. HSP 2 e-value: 1.0E-12 bit: 73.8 Len: 45 Query Start:61 Query End:105 Subject Strand: NEGATIVE Subject Start: 133 Subject End: 177 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataa................................... ............................................................tgcggctagcttcctagtttgcactttgattttcattgagtataa................................... Subject: NC_003098_spr1217_spr1218|bifunctional methionine sulfoxide reductase A/B protein:homoserine kinase|NEGATIVE:NEGATIVE|[1214550,1214844]|295 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 33 Subject End: 79 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgtcaccttaccgta............................................................................................. HSP 2 e-value: 1.0E-15 bit: 83.8 Len: 50 Query Start:56 Query End:105 Subject Strand: POSITIVE Subject Start: 180 Subject End: 229 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... .......................................................cagcctgcggctagcttcctagtttgctctttgattttcattgagtataa................................... Subject: NC_003098_spr1081_spr1082|hypothetical protein:GTP-binding protein LepA|NEGATIVE:NEGATIVE|[1076753,1077368]|616 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 43 Query Start:1 Query End:43 Subject Strand: NEGATIVE Subject Start: 484 Subject End: 526 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttac................................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttac................................................................................................. HSP 2 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 377 Subject End: 419 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtat..................................... Subject: NC_003098_spr0690_spr0691|hypothetical protein:Biotin synthase|POSITIVE:NEGATIVE|[690651,690853]|203 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 51 Query Start:56 Query End:106 Subject Strand: POSITIVE Subject Start: 103 Subject End: 153 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. .......................................................cagcctgcggctagcttcctagtttgctctttgattttcattgagtataag.................................. HSP 2 e-value: 1.0E-6 bit: 54.0 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 1 Subject End: 47 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccgcatcagctttgccttgccgta............................................................................................. Subject: NC_003098_spr0531_spr0532|hypothetical protein:ABC transporter membrane-spanning permease - glutamine transport|NEGATIVE:NEGATIVE|[531857,532101]|245 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 47 Query Start:59 Query End:105 Subject Strand: NEGATIVE Subject Start: 132 Subject End: 178 ..........................................................cttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... ..........................................................cttgcggctagcttcctagtttgctctttgattttcattgagtataa................................... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 32 Query Start:2 Query End:33 Subject Strand: NEGATIVE Subject Start: 213 Subject End: 244 .actcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... .actcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_003028_SP_2153_SP_2156|hypothetical protein:SPFH domain/Band 7 family|POSITIVE:NEGATIVE|[2068633,2069965]|1333 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 1279 Subject End: 1325 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttgccgta............................................................................................. HSP 2 e-value: 1.0E-6 bit: 54.0 Len: 39 Query Start:64 Query End:102 Subject Strand: NEGATIVE Subject Start: 1133 Subject End: 1171 ...............................................................ggctagcttcctagttcgctctttgattttcattgagta...................................... ...............................................................ggctagtttcctaatttgctctttgattttcattgagta...................................... Subject: NC_003028_SP_1516_SP_1517|acetyltransferase, GNAT family:transcription elongation factor GreA|NEGATIVE:NEGATIVE|[1424331,1424807]|477 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 374 Subject End: 420 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttgccgta............................................................................................. HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 91 Subject End: 133 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagtttcctagtttgctctttgatttttattgagtat..................................... Subject: NC_003028_SP_1359_SP_1360|bifunctional methionine sulfoxide reductase A/B protein:homoserine kinase|NEGATIVE:NEGATIVE|[1281932,1282225]|294 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 33 Subject End: 79 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgtcaccttaccgta............................................................................................. HSP 2 e-value: 1.0E-15 bit: 83.8 Len: 50 Query Start:56 Query End:105 Subject Strand: POSITIVE Subject Start: 179 Subject End: 228 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... .......................................................cagcctgcggctagcttcctagtttgctctttgattttcattgagtataa................................... Subject: NC_003028_SP_0788_SP_0789|methionine--tRNA ligase:hypothetical protein|POSITIVE:POSITIVE|[743783,744247]|465 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 326 Subject End: 372 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcgtcgccctaccgta............................................................................................. HSP 2 e-value: 5.0E-15 bit: 81.8 Len: 45 Query Start:61 Query End:105 Subject Strand: NEGATIVE Subject Start: 41 Subject End: 85 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataa................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtataa................................... Subject: NC_003028_SP_0782_SP_0783|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[735967,736171]|205 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 51 Query Start:56 Query End:106 Subject Strand: POSITIVE Subject Start: 103 Subject End: 153 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. .......................................................cagcctgcggctagcttcctagtttgctctttgattttcattgagtataag.................................. HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 1 Subject End: 47 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccgcgtcagctttgccttgccgta............................................................................................. Subject: NC_003028_SP_0606_SP_0607|oxidoreductase, putative:amino acid ABC transporter, permease protein|NEGATIVE:NEGATIVE|[574009,574253]|245 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 47 Query Start:59 Query End:105 Subject Strand: NEGATIVE Subject Start: 132 Subject End: 178 ..........................................................cttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... ..........................................................cttgcggctagcttcctagtttgctctttgattttcattgagtataa................................... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 32 Query Start:2 Query End:33 Subject Strand: NEGATIVE Subject Start: 213 Subject End: 244 .actcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... .actcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_008533_SPD_1931_SPD_1932|hypothetical protein:maltodextrin phosphorylase|POSITIVE:NEGATIVE|[1902224,1903267]|1044 HSP 1 e-value: 1.0E-15 bit: 83.8 Len: 46 Query Start:61 Query End:106 Subject Strand: NEGATIVE Subject Start: 930 Subject End: 975 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtataag.................................. HSP 2 e-value: 3.0E-10 bit: 65.9 Len: 33 Query Start:1 Query End:33 Subject Strand: NEGATIVE Subject Start: 1012 Subject End: 1044 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_008533_SPD_1086_SPD_1087|A/G-specific adenine glycosylase:formate--tetrahydrofolate ligase|NEGATIVE:NEGATIVE|[1117070,1117397]|328 HSP 1 e-value: 1.0E-15 bit: 83.8 Len: 46 Query Start:61 Query End:106 Subject Strand: NEGATIVE Subject Start: 87 Subject End: 132 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtataag.................................. HSP 2 e-value: 1.0E-6 bit: 54.0 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 195 Subject End: 241 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatcttttcaaactacgtcagcttcaccttgccgta............................................................................................. Subject: NC_003098_spr1915_spr1916|hypothetical protein:Maltodextrin phosphorylase|POSITIVE:NEGATIVE|[1894692,1895735]|1044 HSP 1 e-value: 1.0E-15 bit: 83.8 Len: 46 Query Start:61 Query End:106 Subject Strand: NEGATIVE Subject Start: 930 Subject End: 975 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtataag.................................. HSP 2 e-value: 3.0E-10 bit: 65.9 Len: 33 Query Start:1 Query End:33 Subject Strand: NEGATIVE Subject Start: 1012 Subject End: 1044 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_003098_spr1108_spr1109|Similar to A/G-specific adenine glycosylase:Formate--tetrahydrofolate ligase|NEGATIVE:NEGATIVE|[1109539,1109866]|328 HSP 1 e-value: 1.0E-15 bit: 83.8 Len: 46 Query Start:61 Query End:106 Subject Strand: NEGATIVE Subject Start: 87 Subject End: 132 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtataag.................................. HSP 2 e-value: 1.0E-6 bit: 54.0 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 195 Subject End: 241 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatcttttcaaactacgtcagcttcaccttgccgta............................................................................................. Subject: NC_003028_SP_2105_SP_2106|hypothetical protein:glycogen phosphorylase family protein|POSITIVE:NEGATIVE|[2015357,2016398]|1042 HSP 1 e-value: 1.0E-15 bit: 83.8 Len: 46 Query Start:61 Query End:106 Subject Strand: NEGATIVE Subject Start: 929 Subject End: 974 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtataag.................................. HSP 2 e-value: 3.0E-10 bit: 65.9 Len: 33 Query Start:1 Query End:33 Subject Strand: NEGATIVE Subject Start: 1010 Subject End: 1042 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_003028_SP_1600_SP_1601|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1504655,1504893]|239 HSP 1 e-value: 1.0E-15 bit: 83.8 Len: 46 Query Start:61 Query End:106 Subject Strand: NEGATIVE Subject Start: 124 Subject End: 169 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtataag.................................. HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 32 Query Start:1 Query End:32 Subject Strand: NEGATIVE Subject Start: 208 Subject End: 239 tactcttcgaaaatctcttcaaaccacgtcag............................................................................................................ tactcttcgaaaatctcttcaaaccacgtcag............................................................................................................ Subject: NC_003028_SP_1228_SP_1229|A/G-specific adenine glycosylase:formate--tetrahydrofolate ligase|NEGATIVE:NEGATIVE|[1161361,1161717]|357 HSP 1 e-value: 1.0E-15 bit: 83.8 Len: 46 Query Start:61 Query End:106 Subject Strand: NEGATIVE Subject Start: 117 Subject End: 162 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtataag.................................. HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 224 Subject End: 270 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaactacgtcagcttcaccttgccgta............................................................................................. Subject: NC_008533_SPD_0353_SPD_0355|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[356986,357757]|772 HSP 1 e-value: 5.0E-15 bit: 81.8 Len: 45 Query Start:61 Query End:105 Subject Strand: POSITIVE Subject Start: 316 Subject End: 360 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataa................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtataa................................... HSP 2 e-value: 3.0E-10 bit: 65.9 Len: 33 Query Start:1 Query End:33 Subject Strand: POSITIVE Subject Start: 247 Subject End: 279 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_003098_spr0696_spr0697|methionine--tRNA ligase:hypothetical protein|POSITIVE:POSITIVE|[698465,698791]|327 HSP 1 e-value: 5.0E-15 bit: 81.8 Len: 45 Query Start:61 Query End:105 Subject Strand: NEGATIVE Subject Start: 41 Subject End: 85 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataa................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtataa................................... HSP 2 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 191 Subject End: 237 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcatcgtcgccctaccgta............................................................................................. Subject: NC_003028_SP_0387_SP_0389|DNA-binding response regulator:hypothetical protein|POSITIVE:POSITIVE|[367533,368450]|918 HSP 1 e-value: 5.0E-15 bit: 81.8 Len: 45 Query Start:61 Query End:105 Subject Strand: POSITIVE Subject Start: 462 Subject End: 506 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataa................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtataa................................... HSP 2 e-value: 3.0E-10 bit: 65.9 Len: 33 Query Start:1 Query End:33 Subject Strand: POSITIVE Subject Start: 393 Subject End: 425 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_008533_SPD_1408_SPD_1409|hypothetical protein:sugar ABC transporter, ATP-binding protein|NEGATIVE:NEGATIVE|[1427612,1428111]|500 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 48 Query Start:1 Query End:48 Subject Strand: NEGATIVE Subject Start: 303 Subject End: 350 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtac............................................................................................ tactcttcgaaaatctcttcaaaccacgtcaacgtcgccttgccgtac............................................................................................ HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 48 Query Start:56 Query End:103 Subject Strand: NEGATIVE Subject Start: 201 Subject End: 248 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... .......................................................cagcttacggctagtttcctagtttgctctttgatttccattgagtat..................................... Subject: NC_008533_SPD_0539_SPD_0540|Ser/Thr protein phosphatase family protein:amino acid ABC transporter, amino acid-binding protein, putative|POSITIVE:NEGATIVE|[553789,553969]|181 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 44 Query Start:63 Query End:106 Subject Strand: NEGATIVE Subject Start: 67 Subject End: 110 ..............................................................cggctagcttcctagttcgctctttgattttcattgagtataag.................................. ..............................................................cggctagcttcctagtttgctctttgattttcattgagtataag.................................. HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 32 Query Start:2 Query End:33 Subject Strand: NEGATIVE Subject Start: 149 Subject End: 180 .actcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... .actcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_003098_spr1436_spr1437|hypothetical protein:ABC transporter ATP-binding protein - multiple sugar transport|NEGATIVE:NEGATIVE|[1420081,1420580]|500 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 48 Query Start:1 Query End:48 Subject Strand: NEGATIVE Subject Start: 303 Subject End: 350 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtac............................................................................................ tactcttcgaaaatctcttcaaaccacgtcaacgtcgccttgccgtac............................................................................................ HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 48 Query Start:56 Query End:103 Subject Strand: NEGATIVE Subject Start: 201 Subject End: 248 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... .......................................................cagcttacggctagtttcctagtttgctctttgatttccattgagtat..................................... Subject: NC_003098_spr1368_spr1369|hypothetical protein:transcription elongation factor GreA|NEGATIVE:NEGATIVE|[1350306,1350773]|468 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 44 Query Start:4 Query End:47 Subject Strand: NEGATIVE Subject Start: 365 Subject End: 408 ...tcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. ...tcttcgaaaatctcttcaaaccacgtcagcgtcgccttgccgta............................................................................................. HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 37 Subject End: 79 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagtttcctagtttgctctttgatttttattgagtat..................................... Subject: NC_003098_spr0544_spr0545|hypothetical protein:ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor precursor|POSITIVE:NEGATIVE|[546259,546439]|181 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 44 Query Start:63 Query End:106 Subject Strand: NEGATIVE Subject Start: 67 Subject End: 110 ..............................................................cggctagcttcctagttcgctctttgattttcattgagtataag.................................. ..............................................................cggctagcttcctagtttgctctttgattttcattgagtataag.................................. HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 32 Query Start:2 Query End:33 Subject Strand: NEGATIVE Subject Start: 149 Subject End: 180 .actcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... .actcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_003028_SP_1579_SP_1580|hypothetical protein:sugar ABC transporter, ATP-binding protein|NEGATIVE:NEGATIVE|[1484730,1485134]|405 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 48 Query Start:1 Query End:48 Subject Strand: NEGATIVE Subject Start: 208 Subject End: 255 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtac............................................................................................ tactcttcgaaaatctcttcaaaccacgtcaacgtcgccttgccgtac............................................................................................ HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 48 Query Start:56 Query End:103 Subject Strand: NEGATIVE Subject Start: 106 Subject End: 153 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... .......................................................cagcttacggctagtttcctagtttgctctttgatttccattgagtat..................................... Subject: NC_003028_SP_0619_SP_0620|hypothetical protein:amino acid ABC transporter, amino acid-binding protein, putative|POSITIVE:NEGATIVE|[588415,588595]|181 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 44 Query Start:63 Query End:106 Subject Strand: NEGATIVE Subject Start: 67 Subject End: 110 ..............................................................cggctagcttcctagttcgctctttgattttcattgagtataag.................................. ..............................................................cggctagcttcctagtttgctctttgattttcattgagtataag.................................. HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 32 Query Start:2 Query End:33 Subject Strand: NEGATIVE Subject Start: 149 Subject End: 180 .actcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... .actcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_008533_SPD_1968_SPD_1969|hypothetical protein:glycosyl hydrolase-related protein|NEGATIVE:NEGATIVE|[1937077,1937401]|325 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 59 Query Start:56 Query End:114 Subject Strand: NEGATIVE Subject Start: 202 Subject End: 260 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtataagcacaagaa.......................... .......................................................cagcctgcagctagcttcctagtttgctctttgattttcattgagtataaaaacaagaa.......................... HSP 2 e-value: 3.0E-10 bit: 65.9 Len: 33 Query Start:1 Query End:33 Subject Strand: NEGATIVE Subject Start: 293 Subject End: 325 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_008533_SPD_1715_SPD_1716|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1714535,1714870]|336 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 51 Query Start:56 Query End:106 Subject Strand: NEGATIVE Subject Start: 84 Subject End: 134 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. .......................................................cagcctgcggctagcttcctagtttggtctttgattttcattgagtataag.................................. HSP 2 e-value: 8.0E-8 bit: 58.0 Len: 33 Query Start:1 Query End:33 Subject Strand: NEGATIVE Subject Start: 211 Subject End: 243 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactctttgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_008533_SPD_1626_SPD_1628|exodeoxyribonuclease III:xanthine phosphoribosyltransferase|POSITIVE:POSITIVE|[1641580, 1642850]|1271 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 496 Subject End: 542 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaagccacgtcaacgtcgccttaccgta............................................................................................. HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 39 Query Start:67 Query End:105 Subject Strand: POSITIVE Subject Start: 607 Subject End: 645 ..................................................................tagcttcctagttcgctctttgattttcattgagtataa................................... ..................................................................tagcttcctagtttgctctttgattttcatttagtataa................................... Subject: NC_008533_SPD_1528_SPD_1530|ABC transporter, ATP-binding protein:hypothetical protein|NEGATIVE:POSITIVE|[1550754,1552061]|1308 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:63 Query End:105 Subject Strand: NEGATIVE Subject Start: 113 Subject End: 155 ..............................................................cggctagcttcctagttcgctctttgattttcattgagtataa................................... ..............................................................cggctagcttcctagttcgctctttgcttttcattgagtataa................................... HSP 2 e-value: 3.0E-13 bit: 75.8 Len: 46 Query Start:1 Query End:46 Subject Strand: NEGATIVE Subject Start: 264 Subject End: 309 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgt.............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcttcgccttgccgt.............................................................................................. Subject: NC_008533_SPD_1458_SPD_1459|GTP pyrophosphokinase:metallo-beta-lactamase superfamily protein|NEGATIVE:POSITIVE|[1472689,1473682]|994 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 51 Query Start:55 Query End:105 Subject Strand: NEGATIVE Subject Start: 852 Subject End: 902 ......................................................acagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... ......................................................acagcctgcggctagctttctagtttgctctttgattttcattgagtataa................................... HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 294 Subject End: 336 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagtttcctagtttgctctttgattttcatttagtat..................................... HSP 3 e-value: 5.0E-9 bit: 61.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 396 Subject End: 442 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcaaaaatctcttcaaaccgcgtcaacgtcgccttgccgta............................................................................................. Subject: NC_008533_SPD_0486_SPD_0487|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[494216,494515]|300 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:61 Query End:103 Subject Strand: POSITIVE Subject Start: 247 Subject End: 289 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 3.0E-10 bit: 65.9 Len: 33 Query Start:1 Query End:33 Subject Strand: POSITIVE Subject Start: 96 Subject End: 128 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_008533_SPD_0099_SPD_0101|capsular polysaccharide biosynthesis protein:hydrolase, haloacid dehalogenase-like family protein|POSITIVE:NEGATIVE|[101068,101462]|395 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 68 Subject End: 114 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcaacgtcgccttgccgta............................................................................................. HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 39 Query Start:65 Query End:103 Subject Strand: POSITIVE Subject Start: 315 Subject End: 353 ................................................................gctagcttcctagttcgctctttgattttcattgagtat..................................... ................................................................gctagtttcctagtttgctctttgattttcattgagtat..................................... Subject: NC_003098_spr1948_spr1949|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1929575,1929899]|325 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 59 Query Start:56 Query End:114 Subject Strand: NEGATIVE Subject Start: 202 Subject End: 260 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtataagcacaagaa.......................... .......................................................cagcctgcagctagcttcctagtttgctctttgattttcattgagtataaaaacaagaa.......................... HSP 2 e-value: 3.0E-10 bit: 65.9 Len: 33 Query Start:1 Query End:33 Subject Strand: NEGATIVE Subject Start: 293 Subject End: 325 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_003098_spr1728_spr1729|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1707004,1707339]|336 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 51 Query Start:56 Query End:106 Subject Strand: NEGATIVE Subject Start: 84 Subject End: 134 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. .......................................................cagcctgcggctagcttcctagtttggtctttgattttcattgagtataag.................................. HSP 2 e-value: 8.0E-8 bit: 58.0 Len: 33 Query Start:1 Query End:33 Subject Strand: NEGATIVE Subject Start: 211 Subject End: 243 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactctttgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_003098_spr1661_spr1662|hypothetical protein:xanthine phosphoribosyltransferase|POSITIVE:POSITIVE|[1634443, 1635319]|877 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 102 Subject End: 148 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaagccacgtcaacgtcgccttaccgta............................................................................................. HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 39 Query Start:67 Query End:105 Subject Strand: POSITIVE Subject Start: 213 Subject End: 251 ..................................................................tagcttcctagttcgctctttgattttcattgagtataa................................... ..................................................................tagcttcctagtttgctctttgattttcatttagtataa................................... Subject: NC_003098_spr0484_spr0485|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[486549,486985]|437 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:61 Query End:103 Subject Strand: POSITIVE Subject Start: 384 Subject End: 426 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 3.0E-10 bit: 65.9 Len: 33 Query Start:1 Query End:33 Subject Strand: POSITIVE Subject Start: 233 Subject End: 265 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_003098_spr0092_spr0093|CapD protein, required for the biosynthesis of type 1 capsular polysaccharide:Phosphoglycolate phosphatase|POSITIVE:NEGATIVE|[101068,101462]|395 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 68 Subject End: 114 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcaacgtcgccttgccgta............................................................................................. HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 39 Query Start:65 Query End:103 Subject Strand: POSITIVE Subject Start: 315 Subject End: 353 ................................................................gctagcttcctagttcgctctttgattttcattgagtat..................................... ................................................................gctagtttcctagtttgctctttgattttcattgagtat..................................... Subject: NC_003028_SP_1912_SP_1914|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1824972,1825659]|688 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 51 Query Start:56 Query End:106 Subject Strand: NEGATIVE Subject Start: 84 Subject End: 134 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. .......................................................cagcctgcggctagcttcctagtttggtctttgattttcattgagtataag.................................. HSP 2 e-value: 3.0E-10 bit: 65.9 Len: 33 Query Start:1 Query End:33 Subject Strand: NEGATIVE Subject Start: 211 Subject End: 243 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_003028_SP_1845_SP_1847|exodeoxyribonuclease:xanthine phosphoribosyltransferase|POSITIVE:POSITIVE|[1754015, 1755276]|1262 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 496 Subject End: 542 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaagccacgtcaacgtcgccttaccgta............................................................................................. HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 39 Query Start:67 Query End:105 Subject Strand: POSITIVE Subject Start: 607 Subject End: 645 ..................................................................tagcttcctagttcgctctttgattttcattgagtataa................................... ..................................................................tagcttcctagtttgctctttgattttcatttagtataa................................... Subject: NC_003028_SP_1717_SP_1718|ABC transporter, ATP-binding protein:hypothetical protein|NEGATIVE:NEGATIVE|[1621815,1622204]|390 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:63 Query End:105 Subject Strand: NEGATIVE Subject Start: 114 Subject End: 156 ..............................................................cggctagcttcctagttcgctctttgattttcattgagtataa................................... ..............................................................cggctagcttcctagtttgctctttgattttcattgagtataa................................... HSP 2 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 264 Subject End: 310 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcttcgccttgccgta............................................................................................. Subject: NC_003028_SP_1645_SP_1646|GTP pyrophosphokinase:metallo-beta-lactamase superfamily protein|NEGATIVE:POSITIVE|[1543974,1544931]|958 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 51 Query Start:55 Query End:105 Subject Strand: NEGATIVE Subject Start: 816 Subject End: 866 ......................................................acagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................... ......................................................acagcctgcggctagctttctagtttgctctttgattttcattgagtataa................................... HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 294 Subject End: 336 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagtttcctagtttgctctttgattttcatttagtat..................................... HSP 3 e-value: 1.0E-6 bit: 54.0 Len: 31 Query Start:1 Query End:31 Subject Strand: NEGATIVE Subject Start: 899 Subject End: 929 tactcttcgaaaatctcttcaaaccacgtca............................................................................................................. tactcttcgaaaatctcttcaaaccgcgtca............................................................................................................. Subject: NC_003028_SP_0560_SP_0561|hypothetical protein:hypothetical protein|NEGATIVE:POSITIVE|[528030,528290]|261 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:61 Query End:103 Subject Strand: POSITIVE Subject Start: 208 Subject End: 250 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 3.0E-10 bit: 65.9 Len: 33 Query Start:1 Query End:33 Subject Strand: POSITIVE Subject Start: 57 Subject End: 89 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_003028_SP_0482_SP_0483|hypothetical protein:ABC transporter, ATP-binding protein|POSITIVE:POSITIVE|[463540,463904]|365 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 148 Subject End: 194 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcttcgccttgccgta............................................................................................. HSP 2 e-value: 3.0E-13 bit: 75.8 Len: 42 Query Start:61 Query End:102 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 42 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagta...................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagta...................................... Subject: NC_003028_SP_0103_SP_0104|capsular polysaccharide biosynthesis protein, putative:hydrolase, haloacid dehalogenase-like family|POSITIVE:NEGATIVE|[106519,106955]|437 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 68 Subject End: 114 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcaacgtcgccttgccgta............................................................................................. HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 39 Query Start:65 Query End:103 Subject Strand: POSITIVE Subject Start: 357 Subject End: 395 ................................................................gctagcttcctagttcgctctttgattttcattgagtat..................................... ................................................................gctagtttcctagtttgctctttgattttcattgagtat..................................... Subject: NC_003028_SP_0033_SP_0034|hypothetical protein:membrane protein|POSITIVE:NEGATIVE|[34691,35008]|318 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 272 Subject End: 318 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcaacgtcgccttgccgta............................................................................................. HSP 2 e-value: 8.0E-11 bit: 67.9 Len: 42 Query Start:64 Query End:105 Subject Strand: NEGATIVE Subject Start: 32 Subject End: 73 ...............................................................ggctagcttcctagttcgctctttgattttcattgagtataa................................... ...............................................................ggctagtttcctagtttgctctttgattttcattgagtataa................................... Subject: NC_008533_SPD_1663_SPD_1664|alpha,alpha-phosphotrehalase:PTS system, trehalose-specific IIABC components|NEGATIVE:NEGATIVE|[1675447,1675623]|177 HSP 1 e-value: 3.0E-13 bit: 75.8 Len: 42 Query Start:64 Query End:105 Subject Strand: NEGATIVE Subject Start: 64 Subject End: 105 ...............................................................ggctagcttcctagttcgctctttgattttcattgagtataa................................... ...............................................................ggctagcttcctagtttgctctttgattttcattgagtataa................................... HSP 2 e-value: 3.0E-10 bit: 65.9 Len: 33 Query Start:1 Query End:33 Subject Strand: NEGATIVE Subject Start: 145 Subject End: 177 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_008533_SPD_0652_SPD_0653|branched-chain amino acid ABC transporter, amino acid-binding protein:branched-chain amino acid ABC transporter, permease protein|POSITIVE:POSITIVE|[671147,671413]|267 HSP 1 e-value: 3.0E-13 bit: 75.8 Len: 46 Query Start:61 Query End:106 Subject Strand: POSITIVE Subject Start: 165 Subject End: 210 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. ............................................................tgcggctagtttcctagtttgctctttgattttcattgagtataag.................................. HSP 2 e-value: 8.0E-8 bit: 58.0 Len: 41 Query Start:1 Query End:41 Subject Strand: POSITIVE Subject Start: 59 Subject End: 99 tactcttcgaaaatctcttcaaaccacgtcagcgtcgcctt................................................................................................... tactcttcgaaaatctcttcaaactgcgtcaacgtcgcctt................................................................................................... Subject: NC_008533_SPD_0556_SPD_0558|hypothetical protein:cell wall-associated serine protease PrtA|POSITIVE:POSITIVE|[568719,569947]|1229 HSP 1 e-value: 3.0E-13 bit: 75.8 Len: 46 Query Start:1 Query End:46 Subject Strand: POSITIVE Subject Start: 811 Subject End: 856 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgt.............................................................................................. tactcttcgaaaatctcttcaaaccacgtcaacgtcgccttgccgt.............................................................................................. HSP 2 e-value: 8.0E-11 bit: 67.9 Len: 42 Query Start:61 Query End:102 Subject Strand: POSITIVE Subject Start: 963 Subject End: 1004 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagta...................................... ............................................................tgcggctagtttcctagtttgctctttgattttcattgagta...................................... Subject: NC_003098_spr1709_spr1710|Dextransucrase (sucrose 6-glucosyltransferase):ABC transporter membrane spanning permease - multiple sugars|NEGATIVE:NEGATIVE|[1682434,1682790]|357 HSP 1 e-value: 3.0E-13 bit: 75.8 Len: 42 Query Start:61 Query End:102 Subject Strand: POSITIVE Subject Start: 316 Subject End: 357 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagta...................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagta...................................... HSP 2 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 209 Subject End: 255 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcttcaccttgccgta............................................................................................. Subject: NC_003098_spr1698_spr1699|Dextran glucosidase:Phosphotransferase system, trehalose-specific IIBC component|NEGATIVE:NEGATIVE|[1667916,1668092]|177 HSP 1 e-value: 3.0E-13 bit: 75.8 Len: 42 Query Start:64 Query End:105 Subject Strand: NEGATIVE Subject Start: 64 Subject End: 105 ...............................................................ggctagcttcctagttcgctctttgattttcattgagtataa................................... ...............................................................ggctagcttcctagtttgctctttgattttcattgagtataa................................... HSP 2 e-value: 3.0E-10 bit: 65.9 Len: 33 Query Start:1 Query End:33 Subject Strand: NEGATIVE Subject Start: 145 Subject End: 177 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_003098_spr0659_spr0660|ABC transporter substrate-binding protein - branched chain amino acid transport:ABC transporter membrane-spanning permease - branched chain amino acid transport|POSITIVE:POSITIVE|[663616,663873]|258 HSP 1 e-value: 3.0E-13 bit: 75.8 Len: 46 Query Start:61 Query End:106 Subject Strand: POSITIVE Subject Start: 165 Subject End: 210 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. ............................................................tgcggctagtttcctagtttgctctttgattttcattgagtataag.................................. HSP 2 e-value: 8.0E-8 bit: 58.0 Len: 41 Query Start:1 Query End:41 Subject Strand: POSITIVE Subject Start: 59 Subject End: 99 tactcttcgaaaatctcttcaaaccacgtcagcgtcgcctt................................................................................................... tactcttcgaaaatctcttcaaactgcgtcaacgtcgcctt................................................................................................... Subject: NC_003098_spr0560_spr0561|hypothetical protein:Cell wall-associated serine proteinase precursor PrtA|POSITIVE:POSITIVE|[561687,562417]|731 HSP 1 e-value: 3.0E-13 bit: 75.8 Len: 46 Query Start:1 Query End:46 Subject Strand: POSITIVE Subject Start: 313 Subject End: 358 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgt.............................................................................................. tactcttcgaaaatctcttcaaaccacgtcaacgtcgccttgccgt.............................................................................................. HSP 2 e-value: 8.0E-11 bit: 67.9 Len: 42 Query Start:61 Query End:102 Subject Strand: POSITIVE Subject Start: 465 Subject End: 506 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagta...................................... ............................................................tgcggctagtttcctagtttgctctttgattttcattgagta...................................... Subject: NC_003028_SP_2140_SP_2141|hypothetical protein:glycosyl hydrolase-related protein|NEGATIVE:NEGATIVE|[2050421,2050571]|151 HSP 1 e-value: 3.0E-13 bit: 75.8 Len: 50 Query Start:65 Query End:114 Subject Strand: NEGATIVE Subject Start: 28 Subject End: 77 ................................................................gctagcttcctagttcgctctttgattttcattgagtataagcacaagaa.......................... ................................................................gctagcttcctagtttgctctttgattttcattgagtataaaaacaagaa.......................... HSP 2 e-value: 2.0E-8 bit: 60.0 Len: 30 Query Start:4 Query End:33 Subject Strand: NEGATIVE Subject Start: 119 Subject End: 148 ...tcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... ...tcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_003028_SP_1894_SP_1895|sucrose phosphorylase:sugar ABC transporter, permease protein|NEGATIVE:NEGATIVE|[1801040,1801396]|357 HSP 1 e-value: 3.0E-13 bit: 75.8 Len: 42 Query Start:61 Query End:102 Subject Strand: POSITIVE Subject Start: 316 Subject End: 357 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagta...................................... ............................................................tgcggctagcttcctagtttgctctttgattttcattgagta...................................... HSP 2 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 209 Subject End: 255 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcttcaccttgccgta............................................................................................. Subject: NC_003028_SP_0749_SP_0750|branched-chain amino acid ABC transporter, amino acid-binding protein:branched-chain amino acid ABC transporter, permease protein|POSITIVE:POSITIVE|[709061,709327]|267 HSP 1 e-value: 3.0E-13 bit: 75.8 Len: 46 Query Start:61 Query End:106 Subject Strand: POSITIVE Subject Start: 165 Subject End: 210 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataag.................................. ............................................................tgcggctagtttcctagtttgctctttgattttcattgagtataag.................................. HSP 2 e-value: 8.0E-8 bit: 58.0 Len: 41 Query Start:1 Query End:41 Subject Strand: POSITIVE Subject Start: 59 Subject End: 99 tactcttcgaaaatctcttcaaaccacgtcagcgtcgcctt................................................................................................... tactcttcgaaaatctcttcaaactgcgtcaacgtcgcctt................................................................................................... Subject: NC_003028_SP_0640_SP_0641|hypothetical protein:serine protease, subtilase family|POSITIVE:POSITIVE|[603164,603894]|731 HSP 1 e-value: 3.0E-13 bit: 75.8 Len: 46 Query Start:1 Query End:46 Subject Strand: POSITIVE Subject Start: 313 Subject End: 358 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgt.............................................................................................. tactcttcgaaaatctcttcaaaccacgtcaacgtcgccttgccgt.............................................................................................. HSP 2 e-value: 8.0E-11 bit: 67.9 Len: 42 Query Start:61 Query End:102 Subject Strand: POSITIVE Subject Start: 465 Subject End: 506 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagta...................................... ............................................................tgcggctagtttcctagtttgctctttgattttcattgagta...................................... Subject: NC_003028_SP_0631_SP_0633|50S ribosomal protein L1:hypothetical protein|POSITIVE:POSITIVE|[598117,598657]|541 HSP 1 e-value: 3.0E-13 bit: 75.8 Len: 46 Query Start:1 Query End:46 Subject Strand: POSITIVE Subject Start: 341 Subject End: 386 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgt.............................................................................................. tactcttcgaaaatctcttcaaaccacgtcaacgtcgccttgccgt.............................................................................................. HSP 2 e-value: 3.0E-10 bit: 65.9 Len: 45 Query Start:61 Query End:105 Subject Strand: POSITIVE Subject Start: 493 Subject End: 537 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataa................................... ............................................................tgcggctagtttcctagtttgctctttggttttcattgagtataa................................... Subject: NC_008533_SPD_0729_SPD_0730|hemolysin-related protein:purine nucleoside phosphorylase|POSITIVE:POSITIVE|[743379,744035]|657 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 41 Query Start:1 Query End:41 Subject Strand: NEGATIVE Subject Start: 207 Subject End: 247 tactcttcgaaaatctcttcaaaccacgtcagcgtcgcctt................................................................................................... tactcttcgaaaatctcttcaaaccacgtcaacgtcgcctt................................................................................................... HSP 2 e-value: 2.0E-11 bit: 69.9 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 99 Subject End: 141 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagtttcctagtttgctctttgattttcattgagtat..................................... Subject: NC_008533_SPD_0622_SPD_0623|transcriptional regulator, TENA/THI-4 family protein, putative:hydroxyethylthiazole kinase|POSITIVE:POSITIVE|[644856,645143]|288 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 45 Query Start:61 Query End:105 Subject Strand: POSITIVE Subject Start: 151 Subject End: 195 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataa................................... ............................................................tgcggttagcttcctagtttgctctttgattttcattgagtataa................................... HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 31 Query Start:2 Query End:32 Subject Strand: POSITIVE Subject Start: 38 Subject End: 68 .actcttcgaaaatctcttcaaaccacgtcag............................................................................................................ .actcttcgaaaatctcttcaaaccacgtcag............................................................................................................ Subject: NC_003098_spr0737_spr0738|Conserved hypothetical protein, truncation:Purine nucleoside phosphorylase (inosine phosphorylase)|POSITIVE:POSITIVE|[735848,736504]|657 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 41 Query Start:1 Query End:41 Subject Strand: NEGATIVE Subject Start: 207 Subject End: 247 tactcttcgaaaatctcttcaaaccacgtcagcgtcgcctt................................................................................................... tactcttcgaaaatctcttcaaaccacgtcaacgtcgcctt................................................................................................... HSP 2 e-value: 2.0E-11 bit: 69.9 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 99 Subject End: 141 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagtttcctagtttgctctttgattttcattgagtat..................................... Subject: NC_003098_spr0628_spr0629|hypothetical protein:hydroxyethylthiazole kinase|POSITIVE:POSITIVE|[637325,637591]|267 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 45 Query Start:61 Query End:105 Subject Strand: POSITIVE Subject Start: 151 Subject End: 195 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataa................................... ............................................................tgcggttagcttcctagtttgctctttgattttcattgagtataa................................... HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 31 Query Start:2 Query End:32 Subject Strand: POSITIVE Subject Start: 38 Subject End: 68 .actcttcgaaaatctcttcaaaccacgtcag............................................................................................................ .actcttcgaaaatctcttcaaaccacgtcag............................................................................................................ Subject: NC_003028_SP_2112_SP_2113|maltose operon transcriptional repressor:hypothetical protein|POSITIVE:NEGATIVE|[2026318,2026608]|291 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 45 Query Start:61 Query End:105 Subject Strand: NEGATIVE Subject Start: 133 Subject End: 177 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataa................................... ............................................................tgcggctagcttcctagtttgcactttgattttcattgagtataa................................... HSP 2 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 238 Subject End: 284 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcttcaccttgccgta............................................................................................. Subject: NC_003028_SP_1706_SP_1707|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1611668,1611851]|184 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 45 Query Start:59 Query End:103 Subject Strand: NEGATIVE Subject Start: 32 Subject End: 76 ..........................................................cttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ..........................................................cttgcggctagtttcctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 1.0E-12 bit: 73.8 Len: 41 Query Start:1 Query End:41 Subject Strand: NEGATIVE Subject Start: 140 Subject End: 180 tactcttcgaaaatctcttcaaaccacgtcagcgtcgcctt................................................................................................... tactcttcgaaaatctcttcaaaccacgtcaacgtcgcctt................................................................................................... Subject: NC_003028_SP_1694_SP_1695|hypothetical protein:acetyl xylan esterase, putative|NEGATIVE:NEGATIVE|[1598698,1599457]|760 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 45 Query Start:61 Query End:105 Subject Strand: NEGATIVE Subject Start: 284 Subject End: 328 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtataa................................... ............................................................tgcggctagcttcttagtttgctctttgattttcattgagtataa................................... HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 389 Subject End: 435 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tacttttcaaaaatctcttcaaaccacgtcagcttcgccttgccgta............................................................................................. Subject: NC_003028_SP_0834_SP_0835|hemolysin-related protein:purine nucleoside phosphorylase, family 1|POSITIVE:POSITIVE|[783000,783652]|653 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 41 Query Start:1 Query End:41 Subject Strand: NEGATIVE Subject Start: 207 Subject End: 247 tactcttcgaaaatctcttcaaaccacgtcagcgtcgcctt................................................................................................... tactcttcgaaaatctcttcaaaccacgtcaacgtcgcctt................................................................................................... HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 99 Subject End: 141 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagtttcttagtttgctctttgattttcattgagtat..................................... Subject: NC_003028_SP_0120_SP_0121|glucose-inhibited division protein A:metallo-beta-lactamase superfamily protein|POSITIVE:NEGATIVE|[124699,125050]|352 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 41 Query Start:63 Query End:103 Subject Strand: POSITIVE Subject Start: 248 Subject End: 288 ..............................................................cggctagcttcctagttcgctctttgattttcattgagtat..................................... ..............................................................cggctagcttcctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 139 Subject End: 185 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccgcgtcaacgtcgccttgccgta............................................................................................. Subject: NC_008533_SPD_1201_SPD_1202|phosphotransferase LicD3:Psr protein|NEGATIVE:NEGATIVE|[1231002,1231279]|278 HSP 1 e-value: 5.0E-12 bit: 71.9 Len: 48 Query Start:56 Query End:103 Subject Strand: POSITIVE Subject Start: 227 Subject End: 274 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... .......................................................cagcctgcggctagcttcctagtttgcactttgattttcattgagtat..................................... HSP 2 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 124 Subject End: 170 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcttcaccttgccgta............................................................................................. Subject: NC_003098_spr1638_spr1639|hypothetical protein:Catabolite control protein|NEGATIVE:NEGATIVE|[1611092,1611987]|896 HSP 1 e-value: 5.0E-12 bit: 71.9 Len: 48 Query Start:56 Query End:103 Subject Strand: POSITIVE Subject Start: 249 Subject End: 296 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... .......................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 102 Subject End: 148 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccgcgtcaacgtcgccttgccgta............................................................................................. Subject: NC_003098_spr1225_spr1226|LicD1 paralog:hypothetical protein|NEGATIVE:NEGATIVE|[1223471,1223748]|278 HSP 1 e-value: 5.0E-12 bit: 71.9 Len: 48 Query Start:56 Query End:103 Subject Strand: POSITIVE Subject Start: 227 Subject End: 274 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... .......................................................cagcctgcggctagcttcctagtttgcactttgattttcattgagtat..................................... HSP 2 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 124 Subject End: 170 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcttcaccttgccgta............................................................................................. Subject: NC_003028_SP_1840_SP_1841|ABC transporter, ATP-binding/permease protein:hypothetical protein|NEGATIVE:NEGATIVE|[1751943,1752147]|205 HSP 1 e-value: 5.0E-12 bit: 71.9 Len: 48 Query Start:56 Query End:103 Subject Strand: NEGATIVE Subject Start: 39 Subject End: 86 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... .......................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 141 Subject End: 187 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccgcgtcaacgtcgccttgccgta............................................................................................. Subject: NC_003028_SP_1367_SP_1368|licD3 protein:psr protein|NEGATIVE:NEGATIVE|[1290910,1291187]|278 HSP 1 e-value: 5.0E-12 bit: 71.9 Len: 48 Query Start:56 Query End:103 Subject Strand: POSITIVE Subject Start: 227 Subject End: 274 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... .......................................................cagcctgcggctagcttcctagtttgcactttgattttcattgagtat..................................... HSP 2 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: POSITIVE Subject Start: 124 Subject End: 170 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcttcaccttgccgta............................................................................................. Subject: NC_003028_SP_0095_SP_0096|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[97857,98130]|274 HSP 1 e-value: 5.0E-12 bit: 71.9 Len: 48 Query Start:56 Query End:103 Subject Strand: NEGATIVE Subject Start: 53 Subject End: 100 .......................................................cagcttgcggctagcttcctagttcgctctttgattttcattgagtat..................................... .......................................................cagcctgcagctagcttcctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 157 Subject End: 203 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccgcgtcagcttcgccttgccgta............................................................................................. Subject: NC_008533_SPD_1568_SPD_1569|GTP cyclohydrolase, putative:aquaporin|POSITIVE:NEGATIVE|[1586901, 1587379]|479 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 5 Subject End: 47 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctaacttcctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 378 Subject End: 424 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcttcaccttgccgta............................................................................................. Subject: NC_008533_SPD_1425_SPD_1426|transporter, major facilitator family protein:hypothetical protein|NEGATIVE:NEGATIVE|[1444487,1444725]|239 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 127 Subject End: 169 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagctttctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 8.0E-8 bit: 58.0 Len: 29 Query Start:1 Query End:29 Subject Strand: NEGATIVE Subject Start: 211 Subject End: 239 tactcttcgaaaatctcttcaaaccacgt............................................................................................................... tactcttcgaaaatctcttcaaaccacgt............................................................................................................... Subject: NC_008533_SPD_1121_SPD_1122|hypothetical protein:DNA processing protein DprA, putative|NEGATIVE:NEGATIVE|[1152536,1153424]|889 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 43 Query Start:64 Query End:106 Subject Strand: NEGATIVE Subject Start: 574 Subject End: 616 ...............................................................ggctagcttcctagttcgctctttgattttcattgagtataag.................................. ...............................................................ggctagcttcctagtttgcgctttgattttcattgagtataag.................................. HSP 2 e-value: 8.0E-8 bit: 58.0 Len: 33 Query Start:1 Query End:33 Subject Strand: NEGATIVE Subject Start: 702 Subject End: 734 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaactacgtcagc........................................................................................................... Subject: NC_008533_SPD_0441_SPD_0442|DNA-directed RNA polymerase, delta subunit, putative:CTP synthase|POSITIVE:POSITIVE|[444164,444552]|389 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 233 Subject End: 279 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccgcgtcaacgtcgccttgccgta............................................................................................. HSP 2 e-value: 1.0E-6 bit: 54.0 Len: 43 Query Start:63 Query End:105 Subject Strand: NEGATIVE Subject Start: 127 Subject End: 169 ..............................................................cggctagcttcctagttcgctctttgattttcattgagtataa................................... ..............................................................cggctagtttcctagcttgcactttgattttcattgagtataa................................... Subject: NC_008533_SPD_0259_SPD_0260|Transglycosylase associated protein:ribosomal small subunit pseudouridine synthase A|POSITIVE:POSITIVE|[257779,258090]|312 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 14 Subject End: 56 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagtttcctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 206 Subject End: 252 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcaaaaatctcttcaaaccgcgtcaacgtcgccttgccgta............................................................................................. Subject: NC_008533_SPD_0077_SPD_0078|potassium uptake protein, Trk family protein:glycosyl transferase, group 2 family protein|POSITIVE:POSITIVE|[78745,79053]|309 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 230 Subject End: 276 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccgcgtcaacgtcgccttgccgta............................................................................................. HSP 2 e-value: 1.0E-6 bit: 54.0 Len: 39 Query Start:65 Query End:103 Subject Strand: NEGATIVE Subject Start: 128 Subject End: 166 ................................................................gctagcttcctagttcgctctttgattttcattgagtat..................................... ................................................................gctagtttcctagtttgatctttgattttcattgagtat..................................... Subject: NC_003098_spr1961_spr1962|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1948666,1949303]|638 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 584 Subject End: 630 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaactacgtcagcgtcgtcttgccgta............................................................................................. HSP 2 e-value: 3.0E-10 bit: 65.9 Len: 41 Query Start:65 Query End:105 Subject Strand: NEGATIVE Subject Start: 435 Subject End: 475 ................................................................gctagcttcctagttcgctctttgattttcattgagtataa................................... ................................................................gctagtttcctagtttgctctttgattttcattgagtataa................................... Subject: NC_003098_spr1603_spr1604|hypothetical protein:Aquaporin Z - water channel protein|POSITIVE:NEGATIVE|[1579370,1579848]|479 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 5 Subject End: 47 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctaacttcctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 378 Subject End: 424 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacgtcagcttcaccttgccgta............................................................................................. Subject: NC_003098_spr1453_spr1454|Major facilitator superfamily transporter - efflux?:hypothetical protein|NEGATIVE:NEGATIVE|[1436956,1437194]|239 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 127 Subject End: 169 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagctttctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 8.0E-8 bit: 58.0 Len: 29 Query Start:1 Query End:29 Subject Strand: NEGATIVE Subject Start: 211 Subject End: 239 tactcttcgaaaatctcttcaaaccacgt............................................................................................................... tactcttcgaaaatctcttcaaaccacgt............................................................................................................... Subject: NC_003098_spr1143_spr1144|hypothetical protein:DNA processing Smf protein|NEGATIVE:NEGATIVE|[1145384,1145893]|510 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 43 Query Start:64 Query End:106 Subject Strand: NEGATIVE Subject Start: 195 Subject End: 237 ...............................................................ggctagcttcctagttcgctctttgattttcattgagtataag.................................. ...............................................................ggctagcttcctagtttgcgctttgattttcattgagtataag.................................. HSP 2 e-value: 8.0E-8 bit: 58.0 Len: 33 Query Start:1 Query End:33 Subject Strand: NEGATIVE Subject Start: 323 Subject End: 355 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaactacgtcagc........................................................................................................... Subject: NC_003098_spr0437_spr0438|DNA-directed RNA polymerase subunit delta:CTP synthetase|POSITIVE:POSITIVE|[436634,437022]|389 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 233 Subject End: 279 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccgcgtcaacgtcgccttgccgta............................................................................................. HSP 2 e-value: 1.0E-6 bit: 54.0 Len: 43 Query Start:63 Query End:105 Subject Strand: NEGATIVE Subject Start: 127 Subject End: 169 ..............................................................cggctagcttcctagttcgctctttgattttcattgagtataa................................... ..............................................................cggctagtttcctagcttgcactttgattttcattgagtataa................................... Subject: NC_003098_spr0429_spr0430|hypothetical protein:ABC transporter ATP-binding protein - cobalt transport|POSITIVE:POSITIVE|[429872,430191]|320 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 103 Subject End: 149 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccacatcagcttcgccttgccgta............................................................................................. HSP 2 e-value: 8.0E-11 bit: 67.9 Len: 42 Query Start:61 Query End:102 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 42 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagta...................................... ............................................................tgcggctaacttcctagtttgctctttgattttcattgagta...................................... Subject: NC_003098_spr0255_spr0256|hypothetical protein:Ribosomal small subunit pseudouridine synthase A|POSITIVE:POSITIVE|[257778,258089]|312 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 14 Subject End: 56 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagtttcctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 5.0E-9 bit: 61.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 206 Subject End: 252 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcaaaaatctcttcaaaccgcgtcaacgtcgccttgccgta............................................................................................. Subject: NC_003098_spr0071_spr0072|Trk transporter NAD+ binding protein - K+ transport:hypothetical protein|POSITIVE:POSITIVE|[78745,79053]|309 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 230 Subject End: 276 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactcttcgaaaatctcttcaaaccgcgtcaacgtcgccttgccgta............................................................................................. HSP 2 e-value: 1.0E-6 bit: 54.0 Len: 39 Query Start:65 Query End:103 Subject Strand: NEGATIVE Subject Start: 128 Subject End: 166 ................................................................gctagcttcctagttcgctctttgattttcattgagtat..................................... ................................................................gctagtttcctagtttgatctttgattttcattgagtat..................................... Subject: NC_003028_SP_1872_SP_1873|iron-compound ABC transporter, iron-compound-binding protein:hypothetical protein|POSITIVE:NEGATIVE|[1778228,1778451]|224 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 21 Subject End: 63 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctagtttcctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 8.0E-8 bit: 58.0 Len: 33 Query Start:1 Query End:33 Subject Strand: NEGATIVE Subject Start: 101 Subject End: 133 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaaccgcgtcagc........................................................................................................... Subject: NC_003028_SP_1777_SP_1778|hypothetical protein:aquaporin|POSITIVE:NEGATIVE|[1695666, 1696188]|523 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 43 Query Start:61 Query End:103 Subject Strand: NEGATIVE Subject Start: 5 Subject End: 47 ............................................................tgcggctagcttcctagttcgctctttgattttcattgagtat..................................... ............................................................tgcggctaacttcctagtttgctctttgattttcattgagtat..................................... HSP 2 e-value: 3.0E-10 bit: 65.9 Len: 33 Query Start:1 Query End:33 Subject Strand: NEGATIVE Subject Start: 436 Subject End: 468 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... Subject: NC_003028_SP_1546_SP_1547|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[1454054,1454329]|276 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 47 Query Start:1 Query End:47 Subject Strand: NEGATIVE Subject Start: 106 Subject End: 152 tactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgta............................................................................................. tactctttgaaaatctcttcaagccacgtcagtgtcgccttaccgta............................................................................................. HSP 2 e-value: 3.0E-10 bit: 65.9 Len: 45 Query Start:57 Query End:101 Subject Strand: NEGATIVE Subject Start: 6 Subject End: 50 ........................................................agcttgcggctagcttcctagttcgctctttgattttcattgagt....................................... ........................................................agcttgcggctagcttcctagtttgctttttgatttttattgagt....................................... Subject: NC_003028_SP_1265_SP_1266|hypothetical protein:DNA processing protein DprA, putative|NEGATIVE:NEGATIVE|[1198773,1199283]|511 HSP 1 e-value: 2.0E-11 bit: 69.9 Len: 43 Query Start:64 Query End:106 Subject Strand: NEGATIVE Subject Start: 196 Subject End: 238 ...............................................................ggctagcttcctagttcgctctttgattttcattgagtataag.................................. ...............................................................ggctagcttcctagtttgcgctttgattttcattgagtataag.................................. HSP 2 e-value: 8.0E-8 bit: 58.0 Len: 33 Query Start:1 Query End:33 Subject Strand: NEGATIVE Subject Start: 324 Subject End: 356 tactcttcgaaaatctcttcaaaccacgtcagc........................................................................................................... tactcttcgaaaatctcttcaaactacgtcagc........................................................................................................... Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UACUCUUCGAAAAUCUCUUCAAACCACGUCAGCGUCGCCUUACCGUACUCAAGUACAGCUUGCGGCUAGCUUCCUAGUUCGCUCUUUGAUUUUCAUUGAGUAUAAGCACAAGAA (((((...(((((((..........(((....))).........((((....)))).....((((((((....)))).)))).....)))))))...)))))............ (-24.30) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UUCUUGUGCUUAUACUCAAUGAAAAUCAAAGAGCGAACUAGGAAGCUAGCCGCAAGCUGUACUUGAGUACGGUAAGGCGACGCUGACGUGGUUUGAAGAGAUUUUCGAAGAGUA ............(((((..((((((((......((((((((..(((..(((....(((((((....)))))))..)))...)))..).)))))))....))))))))..))))) (-37.70) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1057 70 21 176 127 smit:SMT_2133|5end_hypothetical_protein_2014007..2014237_NEGATIVE 1057 70 21 176 127 smit:SMT_872|5end_hypothetical_protein_820618..820848_NEGATIVE 1057 70 21 176 127 smit:SMT_385|5end_hypothetical_protein_319895..320125_POSITIVE 939 69 21 210 162 smit:SMT_662|5end_A/G-specific_adenine_glycosylase_573827..574057_NEGATIVE 889 70 21 194 145 smit:SMT_1535|5end_exodeoxyribonuclease_V_alpha_chain_1518067..1518297_POSITIVE 770 50 1 221 171 smit:SMT_1139|5end_rRNA_(guanine-N1-)-methyltransferase_1079755..1079985_POSITIVE 768 100 52 95 49 smit:SMT_123|5end_hypothetical_protein_75391..75621_POSITIVE 724 47 1 199 153 smit:SMT_236|5end_ribosomal_small_subunit_pseudouridine_synthase_A_174625..174855_POSITIVE 711 100 52 95 49 smit:SMT_1911|5end_hypothetical_protein_1857614..1857844_POSITIVE 635 100 52 95 49 smit:SMT_867|5end_hypothetical_protein_816316..816546_POSITIVE 630 100 52 95 49 smit:SMT_1494|5end_nucleoside_diphosphate_kinase_1479500..1479730_POSITIVE 585 45 1 173 124 smit:SMT_1783|5end_peptide_methionine_sulfoxide_reductase_1759756..1759986_POSITIVE 559 42 1 214 166 smit:SMT_1592|5end_putative_hemolysin_1579655..1579885_POSITIVE 554 100 52 95 49 smit:SMT_2086|5end_hypothetical_protein_1983696..1983926_NEGATIVE 551 100 52 198 152 smit:SMT_740|5end_50S_ribosomal_protein_L10_644116..644346_NEGATIVE 499 34 1 231 198 smit:SMT_496|5end_superoxide_dismutase,_manganese-dependent_430433..430663_POSITIVE 495 42 1 217 168 smit:SMT_218|5end_undecaprenyl_pyrophosphate_synthetase_150155..150385_POSITIVE 488 47 18 155 126 smit:SMT_604|5end_DNA_polymerase_III,_epsilon_chain_518693..518923_POSITIVE 484 42 1 206 158 smit:SMT_1026|5end_sucrose_phosphorylase_962324..962554_NEGATIVE 447 33 1 230 197 smit:SMT_826|5end_hypothetical_protein_750022..750252_NEGATIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1062 70 21 58 9 smit:SMT_1670|3end_K02030_polar_amino_acid_transport_system_substrate-binding_protein_1659295..1659445_POSITIVE 1057 70 21 61 12 smit:SMT_2134|3end_hypothetical_protein_2014122..2014272_NEGATIVE 1057 70 21 61 12 smit:SMT_873|3end_hypothetical_protein_820733..820883_NEGATIVE 1057 70 21 61 12 smit:SMT_384|3end_hypothetical_protein_319860..320010_POSITIVE 933 79 34 46 1 smit:SMT_1068|3end_ATP-dependent_DNA_helicase_RecG_1008986..1009136_POSITIVE 812 47 1 147 101 smit:SMT_123|3end_hypothetical_protein_75623..75773_POSITIVE 769 100 51 52 3 smit:SMT_663|3end_phosphate_acetyltransferase_574016..574166_NEGATIVE 768 100 52 88 42 smit:SMT_1075|3end_hypothetical_protein_1013870..1014020_POSITIVE 711 100 52 55 9 smit:SMT_1910|3end_pyruvate-formate_lyase_activating_enzyme_1857654..1857804_POSITIVE 705 100 52 84 38 smit:SMT_451|3end_thiamine-phosphate_pyrophosphorylase_389647..389797_POSITIVE 693 100 52 88 42 smit:SMT_1625|3end_DNA_polymerase_IV_1615066..1615216_POSITIVE 690 79 31 67 19 smit:SMT_1689|3end_PTS_enzyme,_maltose-and_glucose-specific,_factor_II_homologue_1673139..1673289_POSITIVE 689 100 52 74 28 smit:SMT_235|3end_hypothetical_protein_174391..174541_POSITIVE 679 110 61 63 15 smit:SMT_1217|3end_hypothetical_protein_1176166..1176316_NEGATIVE 645 100 58 43 1 smit:SMT_1535|3end_exodeoxyribonuclease_V_alpha_chain_1520513..1520663_POSITIVE 644 47 4 141 98 smit:SMT_1911|3end_hypothetical_protein_1857840..1857990_POSITIVE 644 47 4 141 98 smit:SMT_867|3end_hypothetical_protein_816542..816692_POSITIVE 643 103 63 41 1 smit:SMT_1356|3end_fibronectin-binding_protein-like_protein_A_1334269..1334419_POSITIVE 620 47 1 82 36 smit:SMT_131|3end_phosphatase,_putative_83031..83181_NEGATIVE 586 100 52 88 42 smit:SMT_951|3end_oxidoreductase,_DadA_family_protein/D-amino_acid_oxidase_898995..899145_NEGATIVE