Origin IGS: ttaattgctttcctttttgcatttttgagttagataaggtataatggttttattgtcttttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgacccgatttggattgctcgtgttcaatgacaggtcttattattagcgagatacgatcaagccttgtctagcggcttgataagagattgatagactcgcggtttctaggcttgagttatgtgtcgagggactgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccattgataatttacattgttttgtaaatctttctaaaacgttgtttttacaacgttttttattttattctttggtattcttttgcaaaaaaagaatacaacattttgttgtatcctaaatattaaatcaagtcctgaattttcttaagtttttatcatattttctgttataattaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcattttttgtgttataattaaggtgccttaagaaaaatattaaggtgccttaagaaaaatattaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcattgttttaatagtttaaagtcaatcttatttttctctaatagaaaataatgaaaaagtaggtttagaaagaggtaagtatct .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 agatacttacctctttctaaacctactttttcattattttctattagagaaaaataagattgactttaaactattaaaacaatgaaaactatatgaaaaacatttagttttttcattatttttcttaaggcaccttaatatttttcttaaggcaccttaatatttttcttaaggcaccttaattataacacaaaaaatgaaaactatatgaaaaacatttagttttttcattatttttcttaaggcaccttaattataacagaaaatatgataaaaacttaagaaaattcaggacttgatttaatatttaggatacaacaaaatgttgtattctttttttgcaaaagaataccaaagaataaaataaaaaacgttgtaaaaacaacgttttagaaagatttacaaaacaatgtaaattatcaatggagccggtgggagtcgaacccacgtccaaacatctgctaacatatttgtctacaaccataggttatgtattcgtttaacagtccctcgacacataactcaagcctagaaaccgcgagtctatcaatctcttatcaagccgctagacaaggcttgatcgtatctcgctaataataagacctgtcattgaacacgagcaatccaaatcgggtcacgcctgctggtttttaggcagctagagcgtaagaagtgttattttttgcagttatatttaactgagcgtttacgtcgccacacgagtcgcaaaatatgcctcataatgcctgtcgaatccgtaacgaccccaaaagacaataaaaccattataccttatctaactcaaaaatgcaaaaaggaaagcaattaa Mask Tandem Repeat Region ================================================ ttaattgctttcctttttgcatttttgagttagataaggtataatggttttattgtcttttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgacccgatttggattgctcgtgttcaatgacaggtcttattattagcgagatacgatcaagccttgtctagcggcttgataagagattgatagactcgcggtttctaggcttgagttatgtgtcgagggactgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccattgataatttacattgttttgtaaatctttctaaaacgttgtttttacaacgttttttattttattctttggtattcttttgcaaaaaaagaatacaacattttgttgtatcctaaatattaaatcaagtcctgaattttcttaagtttttatcatattttctgttataattaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcattttttgtgttatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatgaaaaaactaaatgtttttcatatagttttcattgttttaatagtttaaagtcaatcttatttttctctaatagaaaataatgaaaaagtaggtttagaaagaggtaagtatct Find is-nt database================================================ Query_seq: SMT_568:SMT_569|SMT_568:SMT_569:hypothetical protein:Mn2+ and Fe2+ transporter of the NRAMP family:->->:486450..487278 829 ttaattgctttcctttttgcatttttgagttagataaggtataatggttttattgtcttttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgacccgatttggattgctcgtgttcaatgacaggtcttattattagcgagatacgatcaagccttgtctagcggcttgataagagattgatagactcgcggtttctaggcttgagttatgtgtcgagggactgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccattgataatttacattgttttgtaaatctttctaaaacgttgtttttacaacgttttttattttattctttggtattcttttgcaaaaaaagaatacaacattttgttgtatcctaaatattaaatcaagtcctgaattttcttaagtttttatcatattttctgttataattaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcattttttgtgttataattaaggtgccttaagaaaaatattaaggtgccttaagaaaaatattaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcattgttttaatagtttaaagtcaatcttatttttctctaatagaaaataatgaaaaagtaggtttagaaagaggtaagtatct Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: SMT_568:SMT_569|SMT_568:SMT_569:hypothetical protein:Mn2+ and Fe2+ transporter of the NRAMP family:->->:486450..487278 829 ttaattgctttcctttttgcatttttgagttagataaggtataatggttttattgtcttttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgacccgatttggattgctcgtgttcaatgacaggtcttattattagcgagatacgatcaagccttgtctagcggcttgataagagattgatagactcgcggtttctaggcttgagttatgtgtcgagggactgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccattgataatttacattgttttgtaaatctttctaaaacgttgtttttacaacgttttttattttattctttggtattcttttgcaaaaaaagaatacaacattttgttgtatcctaaatattaaatcaagtcctgaattttcttaagtttttatcatattttctgttataattaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcattttttgtgttataattaaggtgccttaagaaaaatattaaggtgccttaagaaaaatattaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcattgttttaatagtttaaagtcaatcttatttttctctaatagaaaataatgaaaaagtaggtttagaaagaggtaagtatct Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: SMT_568:SMT_569|SMT_568:SMT_569:hypothetical protein:Mn2+ and Fe2+ transporter of the NRAMP family:->->:486450..487278 829 ttaattgctttcctttttgcatttttgagttagataaggtataatggttttattgtcttttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgacccgatttggattgctcgtgttcaatgacaggtcttattattagcgagatacgatcaagccttgtctagcggcttgataagagattgatagactcgcggtttctaggcttgagttatgtgtcgagggactgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccattgataatttacattgttttgtaaatctttctaaaacgttgtttttacaacgttttttattttattctttggtattcttttgcaaaaaaagaatacaacattttgttgtatcctaaatattaaatcaagtcctgaattttcttaagtttttatcatattttctgttataattaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcattttttgtgttataattaaggtgccttaagaaaaatattaaggtgccttaagaaaaatattaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcattgttttaatagtttaaagtcaatcttatttttctctaatagaaaataatgaaaaagtaggtttagaaagaggtaagtatct Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 ttaattgctttcctttttgcatttttgagttagataaggtataatggttttattgtcttttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgacccgatttggattgctcgtgttcaatgacaggtcttattattagcgagatacgatcaagccttgtctagcggcttgataagagattgatagactcgcggtttctaggcttgagttatgtgtcgagggactgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccattgataatttacattgttttgtaaatctttctaaaacgttgtttttacaacgttttttattttattctttggtattcttttgcaaaaaaagaatacaacattttgttgtatcctaaatattaaatcaagtcctgaattttcttaagtttttatcatattttctgttataattaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcattttttgtgttataattaaggtgccttaagaaaaatattaaggtgccttaagaaaaatattaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcattgttttaatagtttaaagtcaatcttatttttctctaatagaaaataatgaaaaagtaggtttagaaagaggtaagtatct Predict ORF larger than 30AA ================================================ Protein_Len: 37 Strand: + Start: 41 End: 151 ........................................ M M V L L S F G V V T D S T G I M R H I L R L V W R R K R S V K Y N C K K ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 58 Strand: + Start: 346 End: 519 ......................................................................................................................................................................................................................................................................................................................................................... M V V D K Y V S R C L D V G S T P T G S I D N L H C F V N L S K T L F L Q R F L F Y S L V F F C K K R I Q H F V V S ...................................................................................................................................................................................................................................................................................................................... Protein_Len: 32 Strand: + Start: 431 End: 526 .............................................................................................................................................................................................................................................................................................................................................................................................................................................. M F L K R C F Y N V F Y F I L W Y S F A K K E Y N I L L Y P K Y ............................................................................................................................................................................................................................................................................................................... Protein_Len: 35 Strand: + Start: 689 End: 793 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M L R C L K K N N E K T K C F S Y S F H C F N S L K S I L F F S N R K .................................... Protein_Len: 38 Strand: - Start: 301 End: 414 ............................................................................................................................................................................................................................................................................................................ A Q T I H R P V T L R I C L R H N Y V F I N A S T Q V H T R S G G A G N I M ............................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 34 Strand: - Start: 239 End: 340 .............................................................................................................................................................................................................................................. R S V I L G Q R A A Q Y S I S L S A T E L S S N H T S P S N F S Y M ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 4 End: 207 ... T L Y P I I T K N D K P T T V S E V P M I L C I K R S T H R R L R E T L Y L Q L F Y C K K R E L Q R F V L L R S G I Q M .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ttaattgctttcctttttgcatttttgagttagataaggtataatggttttattgtcttttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgacccgatttggattgctcgtgttcaatgacaggtcttattattagcgagatacgatcaagccttgtctagcggcttgataagagattgatagactcgcggtttctaggcttgagttatgtgtcgagggactgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccattgataatttacattgttttgtaaatctttctaaaacgttgtttttacaacgttttttattttattctttggtattcttttgcaaaaaaagaatacaacattttgttgtatcctaaatattaaatcaagtcctgaattttcttaagtttttatcatattttctgttataattaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcattttttgtgttataattaaggtgccttaagaaaaatattaaggtgccttaagaaaaatattaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcattgttttaatagtttaaagtcaatcttatttttctctaatagaaaataatgaaaaagtaggtttagaaagaggtaagtatct Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: + Score: 85 Start: 16 End: 45 ...............TTTGCATTTTTGAGTTAGATAAGGTATAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ ttaattgctttcctttttgcatttttgagttagataaggtataatggttttattgtcttttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgacccgatttggattgctcgtgttcaatgacaggtcttattattagcgagatacgatcaagccttgtctagcggcttgataagagattgatagactcgcggtttctaggcttgagttatgtgtcgagggactgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccattgataatttacattgttttgtaaatctttctaaaacgttgtttttacaacgttttttattttattctttggtattcttttgcaaaaaaagaatacaacattttgttgtatcctaaatattaaatcaagtcctgaattttcttaagtttttatcatattttctgttataattaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcattttttgtgttataattaaggtgccttaagaaaaatattaaggtgccttaagaaaaatattaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcattgttttaatagtttaaagtcaatcttatttttctctaatagaaaataatgaaaaagtaggtttagaaagaggtaagtatct Predict TransTerm conf > 70================================================ TransTerm Strand: - Conf: 50 HP_score: -4.9 Tail_Score: -2.70528 Start: 250 End: 272 Full_Region: tctatcaatctctta tcaagcc gctagacaa ggcttga tcgtatctcgctaat .........................................................................................................................................................................................................................................................tcaagccgctagacaaggcttga............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: + Conf: 46 HP_score: -2.8 Tail_Score: -3.52678 Start: 414 End: 431 Full_Region: CGGCTCCATTGATAA TTTACA TTGTTT TGTAAA TCTTTCTAAAACGTT .............................................................................................................................................................................................................................................................................................................................................................................................................................TTTACATTGTTTTGTAAA.............................................................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: - Conf: 44 HP_score: -2.8 Tail_Score: -3.35679 Start: 414 End: 431 Full_Region: aacgttttagaaaga tttaca aaacaa tgtaaa ttatcaatggagccg .............................................................................................................................................................................................................................................................................................................................................................................................................................tttacaaaacaatgtaaa.............................................................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: - Conf: 77 HP_score: -7.6 Tail_Score: -4.10453 Start: 443 End: 458 Full_Region: gaataaaataaaaaa cgttgt aaaa acaacg ttttagaaagattta ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................cgttgtaaaaacaacg................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 100 HP_score: -7.6 Tail_Score: -5.92399 Start: 443 End: 458 Full_Region: TAAATCTTTCTAAAA CGTTGT TTTT ACAACG TTTTTTATTTTATTC ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGTTTTTACAACG................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 100 HP_score: -10.0 Tail_Score: -5.40072 Start: 497 End: 519 Full_Region: ttgatttaatattta ggatacaaca aaa tgttgtattc tttttttgcaaaaga ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ggatacaacaaaatgttgtattc...................................................................................................................................................................................................................................................................................................................... Find igs database================================================ Query_seq: SMT_568:SMT_569|SMT_568:SMT_569:hypothetical protein:Mn2+ and Fe2+ transporter of the NRAMP family:->->:486450..487278 829 ttaattgctttcctttttgcatttttgagttagataaggtataatggttttattgtcttttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgacccgatttggattgctcgtgttcaatgacaggtcttattattagcgagatacgatcaagccttgtctagcggcttgataagagattgatagactcgcggtttctaggcttgagttatgtgtcgagggactgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccattgataatttacattgttttgtaaatctttctaaaacgttgtttttacaacgttttttattttattctttggtattcttttgcaaaaaaagaatacaacattttgttgtatcctaaatattaaatcaagtcctgaattttcttaagtttttatcatattttctgttataattaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcattttttgtgttataattaaggtgccttaagaaaaatattaaggtgccttaagaaaaatattaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcattgttttaatagtttaaagtcaatcttatttttctctaatagaaaataatgaaaaagtaggtttagaaagaggtaagtatct Intra-Species Hit: Count: 1 Min: 1 Max: 829 Len: 829 Subject: smit_SMT_568_SMT_569|hypothetical protein:Mn2+ and Fe2+ transporter of the NRAMP family|POSITIVE:POSITIVE|[486450,487278]|829 HSP 1 e-value: 0.0 bit: 817.0 Len: 412 Query Start:1 Query End:412 Subject Strand: POSITIVE Subject Start: 1 Subject End: 412 ttaattgctttcctttttgcatttttgagttagataaggtataatggttttattgtcttttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgacccgatttggattgctcgtgttcaatgacaggtcttattattagcgagatacgatcaagccttgtctagcggcttgataagagattgatagactcgcggtttctaggcttgagttatgtgtcgagggactgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccattgata................................................................................................................................................................................................................................................................................................................................................................................................................................. ttaattgctttcctttttgcatttttgagttagataaggtataatggttttattgtcttttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgacccgatttggattgctcgtgttcaatgacaggtcttattattagcgagatacgatcaagccttgtctagcggcttgataagagattgatagactcgcggtttctaggcttgagttatgtgtcgagggactgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccattgata................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 9.0E-86 bit: 319.0 Len: 161 Query Start:497 Query End:657 Subject Strand: POSITIVE Subject Start: 497 Subject End: 657 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gaatacaacattttgttgtatcctaaatattaaatcaagtcctgaattttcttaagtttttatcatattttctgttataattaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcattttttgtgttataattaaggtgcc............................................................................................................................................................................ ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gaatacaacattttgttgtatcctaaatattaaatcaagtcctgaattttcttaagtttttatcatattttctgttataattaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcattttttgtgttataattaaggtgcc............................................................................................................................................................................ HSP 3 e-value: 1.0E-50 bit: 202.0 Len: 102 Query Start:728 Query End:829 Subject Strand: POSITIVE Subject Start: 728 Subject End: 829 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgtttttcatatagttttcattgttttaatagtttaaagtcaatcttatttttctctaatagaaaataatgaaaaagtaggtttagaaagaggtaagtatct .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgtttttcatatagttttcattgttttaatagtttaaagtcaatcttatttttctctaatagaaaataatgaaaaagtaggtttagaaagaggtaagtatct HSP 4 e-value: 7.0E-25 bit: 117.0 Len: 59 Query Start:576 Query End:634 Subject Strand: POSITIVE Subject Start: 691 Subject End: 749 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcatt................................................................................................................................................................................................... ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attaaggtgccttaagaaaaataatgaaaaaactaaatgtttttcatatagttttcatt................................................................................................................................................................................................... HSP 5 e-value: 8.0E-9 bit: 63.9 Len: 40 Query Start:559 Query End:598 Subject Strand: POSITIVE Subject Start: 630 Subject End: 669 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tcatattttctgttataattaaggtgccttaagaaaaata....................................................................................................................................................................................................................................... ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tcattttttgtgttataattaaggtgccttaagaaaaata....................................................................................................................................................................................................................................... Inter-species Hit: Count: 17 Min: 13 Max: 408 Len: 396 Subject: NC_003028_SP_0873_SP_0874|membrane protein:hypothetical protein|POSITIVE:NEGATIVE|[821396,822273]|878 HSP 1 e-value: 0.0 bit: 702.0 Len: 394 Query Start:13 Query End:406 Subject Strand: POSITIVE Subject Start: 485 Subject End: 878 ............ctttttgcatttttgagttagataaggtataatggttttattgtcttttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgacccgatttggattgctcgtgttcaatgacaggtcttattattagcgagatacgatcaagccttgtctagcggcttgataagagattgatagactcgcggtttctaggcttgagttatgtgtcgagggactgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctcca....................................................................................................................................................................................................................................................................................................................................................................................................................................... ............ctttttgcatttttgagttagataaggtataatgattttattgtcttttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgacccgatttggattgctcgtgttcaatgacaggtcttattattagcgagatacgattaagccttgtctagcggtttgataagagattgatagactcgcagtttctagacttgagttatgtgtcgaggggctgttaaaataatacataacctatggttgtagacaaatatgttggcaggtgtttggacgtgggttcgactcccaccggctcca....................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_009009_SSA_0826_SSA_0827|hypothetical protein:Conserved uncharacterized cytosolic protein, putative|POSITIVE:POSITIVE|[805577,806172]|596 HSP 1 e-value: 1.0E-75 bit: 285.0 Len: 369 Query Start:40 Query End:408 Subject Strand: POSITIVE Subject Start: 62 Subject End: 429 .......................................tataatggttttattgtcttttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcg-acgtaaa-cgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgacccgatttggattgctcgtgttcaatgacaggtcttattattagcgagatacgatcaagccttgtctagcggcttgataagagattgatagactcgcggtttctaggcttgagttatgtgtcgagggactgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccatt..................................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................tataatgttcttattgtctt--ggggtcgttacggattcgacaggcattatgaggcacattttgcgactcatctagcggatgtaaaacgc-cagttaaatataactgcaaaaaataacaattcttacgctttagctgcctaaaaaccagccagcgtgacccgattcggattgcttgtgtctgatgacaggtcttattatgagcaagctacggcaaagtctagtctagggattttgcaagagattgatagactcgcttgacttgggcttgagctatgtgtcaaagtgaagttaaaccaatacatagcctatggttgtagacaaatgtgttagcaggtgtttggacgtgggttcgactcccaccggctccatt..................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_007432_SAK_1029_SAK_1031|transferase, hexapeptide repeat family:hypothetical protein|NEGATIVE:POSITIVE|[999696,1000405]|710 HSP 1 e-value: 4.0E-29 bit: 131.0 Len: 74 Query Start:334 Query End:407 Subject Strand: NEGATIVE Subject Start: 271 Subject End: 344 .............................................................................................................................................................................................................................................................................................................................................aatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................................................................................aatacataacctatagttgtagacaaatatattagcagatgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 7.0E-25 bit: 117.0 Len: 131 Query Start:57 Query End:187 Subject Strand: NEGATIVE Subject Start: 493 Subject End: 623 ........................................................cttttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ........................................................cttttggggtcgttacggattcgacaggcattatgaggtatatttcgcgactcatcggcagatgtaaaatgccagttaaatataactgcaaaaaatacaaattcttacgcattagctgcctaaaaaacagc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: NC_004368_gbs0924_gbs0925|hypothetical protein:hypothetical protein|NEGATIVE:POSITIVE|[965091,965874]|784 HSP 1 e-value: 4.0E-29 bit: 131.0 Len: 74 Query Start:334 Query End:407 Subject Strand: NEGATIVE Subject Start: 339 Subject End: 412 .............................................................................................................................................................................................................................................................................................................................................aatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................................................................................aatacataacctatagttgtagacaaatatattagcagatgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 3.0E-27 bit: 125.0 Len: 131 Query Start:57 Query End:187 Subject Strand: NEGATIVE Subject Start: 561 Subject End: 691 ........................................................cttttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ........................................................cttttggggtcgttacggattcgacaggcattatgaggtatattttgcgactcatcggcagatgtaaaatgccagttaaatataactgcaaaaaatacaaattcttacgcattagctgcctaaaaaacagc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: NC_004116_SAG0913_SAG0914|chloramphenicol acetyltransferase:hypothetical protein|NEGATIVE:POSITIVE|[922144,922853]|710 HSP 1 e-value: 4.0E-29 bit: 131.0 Len: 74 Query Start:334 Query End:407 Subject Strand: NEGATIVE Subject Start: 271 Subject End: 344 .............................................................................................................................................................................................................................................................................................................................................aatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................................................................................aatacataacctatagttgtagacaaatatattagcagatgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 7.0E-25 bit: 117.0 Len: 131 Query Start:57 Query End:187 Subject Strand: NEGATIVE Subject Start: 493 Subject End: 623 ........................................................cttttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ........................................................cttttggggtcgttacggattcgacaggcattatgaggtatatttcgcgactcatcggcagatgtaaaatgccagttaaatataactgcaaaaaatacaaattcttacgcattagctgcctaaaaaacagc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: NC_004350_SMU.1196c_SMU.1197|hypothetical protein:hypothetical protein|NEGATIVE:POSITIVE|[1139292,1139763]|472 HSP 1 e-value: 4.0E-26 bit: 121.0 Len: 127 Query Start:61 Query End:187 Subject Strand: NEGATIVE Subject Start: 267 Subject End: 394 ............................................................tggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggc-gacgt-aaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ............................................................tggggtcgttacggattcgacaggcattatgagacctattttgcgactcatctagcggatgtaaaacgc-cagttaaatataactgcaaaaaatacaaattcttacgcagtagctgcctaaaaaccagc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-25 bit: 119.0 Len: 72 Query Start:337 Query End:408 Subject Strand: NEGATIVE Subject Start: 46 Subject End: 117 ................................................................................................................................................................................................................................................................................................................................................acataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccatt..................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................acataacctatagttgtagacaaatgggttagcagatgtttggacgtgggttcgactcccaccggctccatt..................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_006086_M6_Spy0981_M6_Spy0982|Putative membrane-associated alkaline phosphatase:unknown phage protein|NEGATIVE:NEGATIVE|[986866,987423]|558 HSP 1 e-value: 7.0E-25 bit: 117.0 Len: 83 Query Start:325 Query End:407 Subject Strand: POSITIVE Subject Start: 355 Subject End: 437 ....................................................................................................................................................................................................................................................................................................................................tgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................tgttaaatgaagacataacctatggacgtagacaaatatgttggcaggtgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-22 bit: 107.0 Len: 138 Query Start:59 Query End:196 Subject Strand: POSITIVE Subject Start: 89 Subject End: 226 ..........................................................tttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgac......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..........................................................tttggggttgttacggattcgacaggcattatgaggcatgttttgcgtcccatcggcagatgtaaattgccagttaaatataactgcaaaaaatacaaactcttacgctttagctgcctaaaaaccagctagcgtgac......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_004606_SPs1117_SPs1118|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1107367,1107956]|590 HSP 1 e-value: 7.0E-25 bit: 117.0 Len: 83 Query Start:325 Query End:407 Subject Strand: POSITIVE Subject Start: 355 Subject End: 437 ....................................................................................................................................................................................................................................................................................................................................tgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................tgttaaatgaagacataacctatggacgtagacaaatatgttggcaggtgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-22 bit: 107.0 Len: 138 Query Start:59 Query End:196 Subject Strand: POSITIVE Subject Start: 89 Subject End: 226 ..........................................................tttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgac......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..........................................................tttggggttgttacggattcgacaggcattatgaggcatgttttgcgtcccatcggcagatgtaaattgccagttaaatataactgcaaaaaatacaaactcttacgctttagctgcctaaaaaccagctagcgtgac......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_004070_SpyM3_0918_SpyM3_0919|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[976847,977436]|590 HSP 1 e-value: 7.0E-25 bit: 117.0 Len: 83 Query Start:325 Query End:407 Subject Strand: POSITIVE Subject Start: 355 Subject End: 437 ....................................................................................................................................................................................................................................................................................................................................tgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................tgttaaatgaagacataacctatggacgtagacaaatatgttggcaggtgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-22 bit: 107.0 Len: 138 Query Start:59 Query End:196 Subject Strand: POSITIVE Subject Start: 89 Subject End: 226 ..........................................................tttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgac......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..........................................................tttggggttgttacggattcgacaggcattatgaggcatgttttgcgtcccatcggcagatgtaaattgccagttaaatataactgcaaaaaatacaaactcttacgctttagctgcctaaaaaccagctagcgtgac......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003485_spyM18_1236_spyM18_1237|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1040722,1041279]|558 HSP 1 e-value: 7.0E-25 bit: 117.0 Len: 83 Query Start:325 Query End:407 Subject Strand: POSITIVE Subject Start: 355 Subject End: 437 ....................................................................................................................................................................................................................................................................................................................................tgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................tgttaaatgaagacataacctatggacgtagacaaatatgttggcaggtgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-22 bit: 107.0 Len: 138 Query Start:59 Query End:196 Subject Strand: POSITIVE Subject Start: 89 Subject End: 226 ..........................................................tttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgac......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..........................................................tttggggttgttacggattcgacaggcattatgaggcatgttttgcgtcccatcggcagatgtaaattgccagttaaatataactgcaaaaaatacaaactcttacgctttagctgcctaaaaaccagctagcgtgac......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_008024_MGAS10750_Spy1144_MGAS10750_Spy1145|Putative membrane-associated alkaline phosphatase:phage protein|NEGATIVE:POSITIVE|[1089410,1089918]|509 HSP 1 e-value: 2.0E-22 bit: 109.0 Len: 83 Query Start:325 Query End:407 Subject Strand: POSITIVE Subject Start: 355 Subject End: 437 ....................................................................................................................................................................................................................................................................................................................................tgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................tgttaaatgaagacataacctatggacgtagacaaatatgttggcaggtgtttggacgtgggttcgactcccaccagctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-22 bit: 107.0 Len: 138 Query Start:59 Query End:196 Subject Strand: POSITIVE Subject Start: 89 Subject End: 226 ..........................................................tttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgac......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..........................................................tttggggttgttacggattcgacaggcattatgaggcatgttttgcgtcccatcggcagatgtaaattgccagttaaatataactgcaaaaaatacaaactcttacgctttagctgcctaaaaaccagctagcgtgac......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_008023_MGAS2096_Spy1054_MGAS2096_Spy1055|Putative membrane-associated alkaline phosphatase:phage protein|NEGATIVE:POSITIVE|[1015874,1016382]|509 HSP 1 e-value: 2.0E-22 bit: 109.0 Len: 83 Query Start:325 Query End:407 Subject Strand: POSITIVE Subject Start: 355 Subject End: 437 ....................................................................................................................................................................................................................................................................................................................................tgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................tgttaaatgaagacataacctatggacgtagacaaatatgttggcaggtgtttggacgtgggttcgactcccaccagctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-21 bit: 105.0 Len: 129 Query Start:59 Query End:187 Subject Strand: POSITIVE Subject Start: 89 Subject End: 217 ..........................................................tttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ..........................................................tttggggttgttacggattcgacaggcattatgaggcatgttttgcgtcccatcggcagatgtaaattgccagttaaatataactgcaaaaaatacaaactcttacgctttagctgcctaaaaaccagc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: NC_008022_MGAS10270_Spy1108_MGAS10270_Spy1109|Putative membrane-associated alkaline phosphatase:phage protein|NEGATIVE:POSITIVE|[1058251,1058759]|509 HSP 1 e-value: 2.0E-22 bit: 109.0 Len: 83 Query Start:325 Query End:407 Subject Strand: POSITIVE Subject Start: 355 Subject End: 437 ....................................................................................................................................................................................................................................................................................................................................tgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................tgttaaatgaagacataacctatggacgtagacaaatatgttggcaggtgtttggacgtgggttcgactcccaccagctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-22 bit: 107.0 Len: 138 Query Start:59 Query End:196 Subject Strand: POSITIVE Subject Start: 89 Subject End: 226 ..........................................................tttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgac......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..........................................................tttggggttgttacggattcgacaggcattatgaggcatgttttgcgtcccatcggcagatgtaaattgccagttaaatataactgcaaaaaatacaaactcttacgctttagctgcctaaaaaccagctagcgtgac......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_008021_MGAS9429_Spy1098_MGAS9429_Spy1099|putative membrane-associated alkaline phosphatase:phage protein|NEGATIVE:POSITIVE|[1055003,1055511]|509 HSP 1 e-value: 2.0E-22 bit: 109.0 Len: 83 Query Start:325 Query End:407 Subject Strand: POSITIVE Subject Start: 355 Subject End: 437 ....................................................................................................................................................................................................................................................................................................................................tgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................tgttaaatgaagacataacctatggacgtagacaaatatgttggcaggtgtttggacgtgggttcgactcccaccagctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-21 bit: 105.0 Len: 129 Query Start:59 Query End:187 Subject Strand: POSITIVE Subject Start: 89 Subject End: 217 ..........................................................tttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ..........................................................tttggggttgttacggattcgacaggcattatgaggcatgttttgcgtcccatcggcagatgtaaattgccagttaaatataactgcaaaaaatacaaactcttacgctttagctgcctaaaaaccagc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: NC_007297_M5005_Spy_0994_M5005_Spy_0995|putative membrane-associated alkaline phosphatase:phage protein|NEGATIVE:NEGATIVE|[983334,983923]|590 HSP 1 e-value: 2.0E-22 bit: 109.0 Len: 83 Query Start:325 Query End:407 Subject Strand: POSITIVE Subject Start: 355 Subject End: 437 ....................................................................................................................................................................................................................................................................................................................................tgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................tgttaaatgaagacataacctatggacgtagacaaatatgttggcaggtgtttggacgtgggttcgactcccaccagctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-22 bit: 107.0 Len: 138 Query Start:59 Query End:196 Subject Strand: POSITIVE Subject Start: 89 Subject End: 226 ..........................................................tttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgac......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..........................................................tttggggttgttacggattcgacaggcattatgaggcatgttttgcgtcccatcggcagatgtaaattgccagttaaatataactgcaaaaaatacaaactcttacgctttagctgcctaaaaaccagctagcgtgac......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_007296_M28_Spy0966_M28_Spy0967|putative membrane-associated alkaline phosphatase:phage protein|NEGATIVE:NEGATIVE|[985792,986381]|590 HSP 1 e-value: 2.0E-22 bit: 109.0 Len: 83 Query Start:325 Query End:407 Subject Strand: POSITIVE Subject Start: 355 Subject End: 437 ....................................................................................................................................................................................................................................................................................................................................tgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................tgttaaatgaagacataacctatggacgtagacaaatatgttggcaggtgtttggacgtgggttcgactcccaccagctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-22 bit: 107.0 Len: 138 Query Start:59 Query End:196 Subject Strand: POSITIVE Subject Start: 89 Subject End: 226 ..........................................................tttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgac......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..........................................................tttggggttgttacggattcgacaggcattatgaggcatgttttgcgtcccatcggcagatgtaaattgccagttaaatataactgcaaaaaatacaaactcttacgctttagctgcctaaaaaccagctagcgtgac......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_002737_SPy1289_SPy1290|hypothetical protein:hypothetical protein|NEGATIVE:POSITIVE|[1064939,1065678]|740 HSP 1 e-value: 2.0E-22 bit: 109.0 Len: 83 Query Start:325 Query End:407 Subject Strand: POSITIVE Subject Start: 355 Subject End: 437 ....................................................................................................................................................................................................................................................................................................................................tgttaaacgaatacataacctatggttgtagacaaatatgttagcagatgtttggacgtgggttcgactcccaccggctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................tgttaaatgaagacataacctatggacgtagacaaatatgttggcaggtgtttggacgtgggttcgactcccaccagctccat...................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-22 bit: 107.0 Len: 138 Query Start:59 Query End:196 Subject Strand: POSITIVE Subject Start: 89 Subject End: 226 ..........................................................tttggggtcgttacggattcgacaggcattatgaggcatattttgcgactcgtgtggcgacgtaaacgctcagttaaatataactgcaaaaaataacacttcttacgctctagctgcctaaaaaccagcaggcgtgac......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..........................................................tttggggttgttacggattcgacaggcattatgaggcatgttttgcgtcccatcggcagatgtaaattgccagttaaatataactgcaaaaaatacaaactcttacgctttagctgcctaaaaaccagctagcgtgac......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ CUUUUUGCAUUUUUGAGUUAGAUAAGGUAUAAUGGUUUUAUUGUCUUUUGGGGUCGUUACGGAUUCGACAGGCAUUAUGAGGCAUAUUUUGCGACUCGUGUGGCGACGUAAACGCUCAGUUAAAUAUAACUGCAAAAAAUAACACUUCUUACGCUCUAGCUGCCUAAAAACCAGCAGGCGUGACCCGAUUUGGAUUGCUCGUGUUCAAUGACAGGUCUUAUUAUUAGCGAGAUACGAUCAAGCCUUGUCUAGCGGCUUGAUAAGAGAUUGAUAGACUCGCGGUUUCUAGGCUUGAGUUAUGUGUCGAGGGACUGUUAAACGAAUACAUAACCUAUGGUUGUAGACAAAUAUGUUAGCAGAUGUUUGGACGUGGGUUCGACUCCCACCGGCUCCAUU ..............(((...(((((..(......)..)))))..))).((((((((............((((((((.((.(((((((((((((((.((((.(((((..((((((..((((((....))))))................((((((.((.((((.........))))))))))))..)).))))..))))).((((((..((((((..(((...........((((((.((((((((.(((((.((((((.....))).))).)))))...........))))))))....)))))).)))..))))))...))))))......))))))))))))...)))))))..))))))))))...(((((.......))))))))))))).. (-102.80) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AAUGGAGCCGGUGGGAGUCGAACCCACGUCCAAACAUCUGCUAACAUAUUUGUCUACAACCAUAGGUUAUGUAUUCGUUUAACAGUCCCUCGACACAUAACUCAAGCCUAGAAACCGCGAGUCUAUCAAUCUCUUAUCAAGCCGCUAGACAAGGCUUGAUCGUAUCUCGCUAAUAAUAAGACCUGUCAUUGAACACGAGCAAUCCAAAUCGGGUCACGCCUGCUGGUUUUUAGGCAGCUAGAGCGUAAGAAGUGUUAUUUUUUGCAGUUAUAUUUAACUGAGCGUUUACGUCGCCACACGAGUCGCAAAAUAUGCCUCAUAAUGCCUGUCGAAUCCGUAACGACCCCAAAAGACAAUAAAACCAUUAUACCUUAUCUAACUCAAAAAUGCAAAAAG (((((.....(((((.......)))))......................((((((.........(((.(((((..((((((...(((....)))..(((((....((((((((((((((((..............((((((((.........)))))))).....))))).........((((((...(((.....((....)))))..)))))).........))))))))))).........(((((((((...))))))))).))))).......))))))..))))).)))....(((..(((.....)))))).........((((.........))))......)))))).....))))).............................. (-92.01) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 380 199 151 77 12 smit:SMT_940|5end_tRNA_pseudouridine_synthase_A_892764..892994_NEGATIVE 372 120 71 124 52 smit:SMT_571|5end_putative_transposase,_ISSmu1_489261..489491_POSITIVE 367 296 251 180 124 smit:SMT_174|5end_30S_ribosomal_protein_S19_117431..117661_POSITIVE 349 179 137 222 173 smit:SMT_1727|5end_uridine_kinase_1712483..1712713_POSITIVE 346 276 241 183 145 smit:SMT_1730|5end_geranyltranstransferase_1714775..1715005_POSITIVE 336 200 159 148 115 smit:SMT_1454|5end_cytidine_deaminase_1437886..1438116_NEGATIVE 330 216 175 210 167 smit:SMT_1244|5end_putative_repressor_protein_1204392..1204622_POSITIVE 324 118 77 181 128 smit:SMT_788|5end_hypothetical_protein_700319..700549_NEGATIVE 320 218 173 226 186 smit:SMT_2052|5end_hypothetical_protein_predicted_by_Glimmer/Critica_1961591..1961821_NEGATIVE 319 219 171 54 6 smit:SMT_1731|5end_K06442_putative_hemolysin_1715643..1715873_POSITIVE 311 289 244 169 128 smit:SMT_1815|5end_K02035_peptide/nickel_transport_system_substrate-binding_protein_1790728..1790958_NEGATIVE 307 260 211 205 158 smit:SMT_1351|5end_dephospho-CoA_kinase_1329817..1330047_NEGATIVE 305 84 44 71 26 smit:SMT_1934|5end_homoserine_dehydrogenase_1872402..1872632_POSITIVE 304 291 251 51 8 smit:SMT_389|5end_PTS_system,_galactitol-specific_IIA_component,_putative_321779..322009_POSITIVE 303 202 162 168 120 smit:SMT_941|5end_hypothetical_protein_893558..893788_NEGATIVE 302 219 171 157 110 smit:SMT_217|5end_hypothetical_protein_149236..149466_POSITIVE 300 122 81 181 133 smit:SMT_1698|5end_CMP-binding_factor_1680092..1680322_POSITIVE 300 315 271 222 178 smit:SMT_578|5end_lipoprotein_signal_peptidase_496061..496291_POSITIVE 300 389 366 170 149 smit:SMT_340|5end_chaperone_protein_278663..278893_POSITIVE 299 290 242 149 96 smit:SMT_446|5end_ABC-type_cobalt_transport_system,_ATPase_component_384870..385100_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 367 296 251 76 20 smit:SMT_173|3end_50S_ribosomal_protein_L2_117407..117557_POSITIVE 349 179 137 112 63 smit:SMT_1726|3end_tRNA_pseudouridine_synthase_B_1712453..1712603_POSITIVE 319 219 171 61 13 smit:SMT_1730|3end_geranyltranstransferase_1715730..1715880_POSITIVE 310 200 153 53 9 smit:SMT_904|3end_hypothetical_protein_852294..852444_NEGATIVE 301 290 245 56 13 smit:SMT_1871|3end_modification_methylase,_HemK_family_1829803..1829953_NEGATIVE 299 189 144 63 22 smit:SMT_2057|3end_cell_division_protein_FtsH_1966897..1967047_NEGATIVE 299 290 242 148 95 smit:SMT_445|3end_hypothetical_protein_384949..385099_POSITIVE 296 259 216 134 89 smit:SMT_1503|3end_SSU_ribosomal_protein_S20P_1487231..1487381_POSITIVE 294 295 251 143 100 smit:SMT_121|3end_hypothetical_protein_74414..74564_POSITIVE 290 390 343 46 7 smit:SMT_82|3end_transcriptional_regulator,_TetR_family_14330..14480_POSITIVE 288 73 31 151 96 smit:SMT_850|3end_hypothetical_protein_796124..796274_NEGATIVE 286 220 183 70 33 smit:SMT_360|3end_K07742_hypothetical_protein_296001..296151_POSITIVE 285 291 252 43 1 smit:SMT_388|3end_branched-chain_amino_acid_transport_system_II_carrier_protein_321851..322001_POSITIVE 280 84 45 145 105 smit:SMT_324|3end_K02029_polar_amino_acid_transport_system_permease_protein_261912..262062_NEGATIVE 279 208 171 147 114 smit:SMT_1625|3end_DNA_polymerase_IV_1615066..1615216_POSITIVE 277 288 242 100 45 smit:SMT_593|3end_K02030_polar_amino_acid_transport_system_substrate-binding_protein_510317..510467_POSITIVE 276 316 275 41 2 smit:SMT_910|3end_type_I_restriction_enzyme_R_protein_858827..858977_NEGATIVE 275 200 158 133 83 smit:SMT_433|3end_cell_division_protein_DivIB_375954..376104_POSITIVE 273 191 154 86 48 smit:SMT_1353|3end_GTP-binding_protein_1330690..1330840_NEGATIVE 273 390 360 102 69 smit:SMT_863|3end_K07485_transposase_814447..814597_POSITIVE