Origin IGS: tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataagtacttactgacttaataaaaaacagaggagagtggtggatgcatcggatgaaatgaaaacgcataccaataccatcttactcattatcccatatggatacgcttattacataggagaatacagatgaaatttagaaattagnnnnnttaattaa .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 ttaattaannnnnctaatttctaaatttcatctgtattctcctatgtaataagcgtatccatatgggataatgagtaagatggtattggtatgcgttttcatttcatccgatgcatccaccactctcctctgttttttattaagtcagtaagtacttatactcttcgaaaatctcttcaaaccatgccagcttcgccttggcgtactcaagtatagcctgcgcctagcttcccagtttgctctttgattttcattgagta Mask Tandem Repeat Region ================================================ tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataagtacttactgacttaataaaaaacagaggagagtggtggatgcatcggatgaaatgaaaacgcataccaataccatcttactcattatcccatatggatacgcttattacataggagaatacagatgaaatttagaaattagnnnnnttaattaa Find is-nt database================================================ Query_seq: SMT_1689:SMT_1690|SMT_1689:SMT_1690:PTS enzyme, maltose-and glucose-specific, factor II homologue:K06148 ATP-binding cassette, subfamily C, bacterial:-><-:1673200..1673459 260 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataagtacttactgacttaataaaaaacagaggagagtggtggatgcatcggatgaaatgaaaacgcataccaataccatcttactcattatcccatatggatacgcttattacataggagaatacagatgaaatttagaaattagnnnnnttaattaa Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: SMT_1689:SMT_1690|SMT_1689:SMT_1690:PTS enzyme, maltose-and glucose-specific, factor II homologue:K06148 ATP-binding cassette, subfamily C, bacterial:-><-:1673200..1673459 260 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataagtacttactgacttaataaaaaacagaggagagtggtggatgcatcggatgaaatgaaaacgcataccaataccatcttactcattatcccatatggatacgcttattacataggagaatacagatgaaatttagaaattagnnnnnttaattaa Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: SMT_1689:SMT_1690|SMT_1689:SMT_1690:PTS enzyme, maltose-and glucose-specific, factor II homologue:K06148 ATP-binding cassette, subfamily C, bacterial:-><-:1673200..1673459 260 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataagtacttactgacttaataaaaaacagaggagagtggtggatgcatcggatgaaatgaaaacgcataccaataccatcttactcattatcccatatggatacgcttattacataggagaatacagatgaaatttagaaattagnnnnnttaattaa Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataagtacttactgacttaataaaaaacagaggagagtggtggatgcatcggatgaaatgaaaacgcataccaataccatcttactcattatcccatatggatacgcttattacataggagaatacagatgaaatttagaaattagnnnnnttaattaa Predict ORF larger than 30AA ================================================ Protein_Len: 31 Strand: + Start: 138 End: 230 ......................................................................................................................................... M V D A S D E M K T H T N T I L L I I P Y G Y A Y Y I G E Y R .............................. Protein_Len: 43 Strand: - Start: 48 End: 176 ............................................... V Q T R W P S A P M T Q L S K R L T Y T S V S K I F F L P S H H I C R I F H F R M G M .................................................................................... tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataagtacttactgacttaataaaaaacagaggagagtggtggatgcatcggatgaaatgaaaacgcataccaataccatcttactcattatcccatatggatacgcttattacataggagaatacagatgaaatttagaaattagnnnnnttaattaa Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataagtacttactgacttaataaaaaacagaggagagtggtggatgcatcggatgaaatgaaaacgcataccaataccatcttactcattatcccatatggatacgcttattacataggagaatacagatgaaatttagaaattagnnnnnttaattaa Predict TransTerm conf > 70================================================ Find igs database================================================ Query_seq: SMT_1689:SMT_1690|SMT_1689:SMT_1690:PTS enzyme, maltose-and glucose-specific, factor II homologue:K06148 ATP-binding cassette, subfamily C, bacterial:-><-:1673200..1673459 260 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataagtacttactgacttaataaaaaacagaggagagtggtggatgcatcggatgaaatgaaaacgcataccaataccatcttactcattatcccatatggatacgcttattacataggagaatacagatgaaatttagaaattagnnnnnttaattaa Intra-Species Hit: Count: 43 Min: 1 Max: 247 Len: 247 Subject: smit_SMT_1689_SMT_1690|PTS enzyme, maltose-and glucose-specific, factor II homologue:K06148 ATP-binding cassette, subfamily C, bacterial|POSITIVE:NEGATIVE|[1673200,1673459]|260 HSP 1 e-value: 1.0E-137 bit: 490.0 Len: 247 Query Start:1 Query End:247 Subject Strand: POSITIVE Subject Start: 1 Subject End: 247 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataagtacttactgacttaataaaaaacagaggagagtggtggatgcatcggatgaaatgaaaacgcataccaataccatcttactcattatcccatatggatacgcttattacataggagaatacagatgaaatttagaaattag............. tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataagtacttactgacttaataaaaaacagaggagagtggtggatgcatcggatgaaatgaaaacgcataccaataccatcttactcattatcccatatggatacgcttattacataggagaatacagatgaaatttagaaattag............. Subject: smit_SMT_798_SMT_799|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[707167,707385]|219 HSP 1 e-value: 6.0E-35 bit: 149.0 Len: 103 Query Start:1 Query End:103 Subject Strand: POSITIVE Subject Start: 115 Subject End: 217 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_1535_SMT_1536|exodeoxyribonuclease V alpha chain:trigger factor|POSITIVE:NEGATIVE|[1520574,1520725]|152 HSP 1 e-value: 1.0E-29 bit: 131.0 Len: 106 Query Start:1 Query End:106 Subject Strand: POSITIVE Subject Start: 46 Subject End: 151 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataag.......................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataag.......................................................................................................................................................... Subject: smit_SMT_1476_SMT_1477|thiol peroxidase:K02077 zinc/manganese transport system substrate-binding protein|NEGATIVE:NEGATIVE|[1459310,1459536]|227 HSP 1 e-value: 1.0E-29 bit: 131.0 Len: 102 Query Start:1 Query End:102 Subject Strand: POSITIVE Subject Start: 126 Subject End: 227 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagta.............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta.............................................................................................................................................................. Subject: smit_SMT_833_SMT_834|hypothetical protein predicted by Glimmer/Critica:hypothetical protein|NEGATIVE:NEGATIVE|[775453,775606]|154 HSP 1 e-value: 1.0E-29 bit: 131.0 Len: 102 Query Start:1 Query End:102 Subject Strand: POSITIVE Subject Start: 53 Subject End: 154 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagta.............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaagagattttcgaagagta.............................................................................................................................................................. Subject: smit_SMT_1849_SMT_1850|hypothetical protein:K01421 putative membrane protein|POSITIVE:POSITIVE|[1813865,1815201]|1337 HSP 1 e-value: 8.0E-28 bit: 125.0 Len: 103 Query Start:1 Query End:103 Subject Strand: POSITIVE Subject Start: 258 Subject End: 360 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. tactcaatgaaaatcaaagatcaaactaggaagctagccgtagtcagtacttgagtacggcaaggcgaagctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_1809_SMT_1810|MutT/NUDIX family protein:hypothetical protein|POSITIVE:POSITIVE|[1785195,1785358]|164 HSP 1 e-value: 8.0E-28 bit: 125.0 Len: 102 Query Start:1 Query End:102 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 103 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagta.............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagta.............................................................................................................................................................. Subject: smit_SMT_915_SMT_916|sucrose operon repressor:3-hydroxy-3-methylglutaryl-CoA reductase|POSITIVE:NEGATIVE|[868680,868819]|140 HSP 1 e-value: 3.0E-27 bit: 123.0 Len: 102 Query Start:1 Query End:102 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 102 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagta.............................................................................................................................................................. tactcaatgaaaatcaaagagcgaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta.............................................................................................................................................................. Subject: smit_SMT_1534_SMT_1535|signal peptidase I:exodeoxyribonuclease V alpha chain|POSITIVE:POSITIVE|[1517973,1518206]|234 HSP 1 e-value: 5.0E-26 bit: 119.0 Len: 103 Query Start:1 Query End:103 Subject Strand: POSITIVE Subject Start: 100 Subject End: 203 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtat............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcgaaactgacgtggtttgaatttgattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_890_SMT_891|K02029 polar amino acid transport system permease protein:oxidoreductase, putative|POSITIVE:POSITIVE|[837753,837989]|237 HSP 1 e-value: 2.0E-25 bit: 117.0 Len: 102 Query Start:1 Query End:102 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 103 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagta.............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactaggaagctagacgcaggctgtacttgagtacggcaaggtgaagctgacgtggtttgaatttgattttcgaagagta.............................................................................................................................................................. Subject: smit_SMT_1781_SMT_1782|transcriptional regulator, xre family:hypothetical protein|POSITIVE:POSITIVE|[1759357,1759659]|303 HSP 1 e-value: 1.0E-23 bit: 111.0 Len: 107 Query Start:1 Query End:107 Subject Strand: NEGATIVE Subject Start: 172 Subject End: 279 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtataagt......................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgaaggctgtacttgagtacggcaaggtgaagctgacgtagtttgaatttgattttcgaagagtataagt......................................................................................................................................................... Subject: smit_SMT_826_SMT_827|hypothetical protein:hypothetical protein|NEGATIVE:POSITIVE|[750113,750528]|416 HSP 1 e-value: 1.0E-23 bit: 111.0 Len: 103 Query Start:1 Query End:103 Subject Strand: NEGATIVE Subject Start: 105 Subject End: 208 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtat............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggttgtactggagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_482_SMT_483|hypothetical protein predicted by Glimmer/Critica:transcriptional activator TipA, putative|NEGATIVE:POSITIVE|[418627,418966]|340 HSP 1 e-value: 1.0E-23 bit: 111.0 Len: 103 Query Start:1 Query End:103 Subject Strand: NEGATIVE Subject Start: 224 Subject End: 327 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtat............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_2108_SMT_2109|adenylosuccinate lyase:hypothetical protein predicted by Glimmer/Critica|NEGATIVE:NEGATIVE|[1998942,1999150]|209 HSP 1 e-value: 5.0E-23 bit: 109.0 Len: 102 Query Start:1 Query End:102 Subject Strand: POSITIVE Subject Start: 107 Subject End: 209 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagta.............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactagaaagctagccacaggctgtacttgagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagta.............................................................................................................................................................. Subject: smit_SMT_1670_SMT_1671|K02030 polar amino acid transport system substrate-binding protein:hypothetical protein|POSITIVE:NEGATIVE|[1659356,1659481]|126 HSP 1 e-value: 5.0E-23 bit: 109.0 Len: 106 Query Start:1 Query End:106 Subject Strand: POSITIVE Subject Start: 1 Subject End: 107 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtataag.......................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagtataag.......................................................................................................................................................... Subject: smit_SMT_1179_SMT_1180|aldose 1-epimerase:putative tagatose-6-phosphate aldose/ketose isomerase|NEGATIVE:NEGATIVE|[1137945,1138125]|181 HSP 1 e-value: 5.0E-23 bit: 109.0 Len: 102 Query Start:1 Query End:102 Subject Strand: POSITIVE Subject Start: 79 Subject End: 181 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagta.............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactagaaagctagccacaggctgtacttgagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagta.............................................................................................................................................................. Subject: smit_SMT_1139_SMT_1140|rRNA (guanine-N1-)-methyltransferase:glycogen phosphorylase|POSITIVE:NEGATIVE|[1080744,1081405]|662 HSP 1 e-value: 5.0E-23 bit: 109.0 Len: 102 Query Start:1 Query End:102 Subject Strand: POSITIVE Subject Start: 560 Subject End: 662 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagta.............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta.............................................................................................................................................................. Subject: smit_SMT_1963_SMT_1964|ribonuclease BN, putative:sodium/hydrogen exchanger family protein|NEGATIVE:NEGATIVE|[1896553,1896685]|133 HSP 1 e-value: 2.0E-22 bit: 107.0 Len: 103 Query Start:1 Query End:103 Subject Strand: POSITIVE Subject Start: 27 Subject End: 130 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtat............................................................................................................................................................. tactcmatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_1601_SMT_1602|hypothetical protein predicted by Glimmer/Critica:hypothetical protein|POSITIVE:POSITIVE|[1592204,1592524]|321 HSP 1 e-value: 2.0E-22 bit: 107.0 Len: 105 Query Start:1 Query End:105 Subject Strand: NEGATIVE Subject Start: 189 Subject End: 294 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtataa........................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagtataa........................................................................................................................................................... Subject: smit_SMT_2133_SMT_2134|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[2014098,2014211]|114 HSP 1 e-value: 7.0E-22 bit: 105.0 Len: 100 Query Start:4 Query End:103 Subject Strand: NEGATIVE Subject Start: 14 Subject End: 114 ...tcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtat............................................................................................................................................................. ...tcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_872_SMT_873|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[820709,820822]|114 HSP 1 e-value: 7.0E-22 bit: 105.0 Len: 100 Query Start:4 Query End:103 Subject Strand: NEGATIVE Subject Start: 14 Subject End: 114 ...tcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtat............................................................................................................................................................. ...tcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_384_SMT_385|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[319921,320034]|114 HSP 1 e-value: 7.0E-22 bit: 105.0 Len: 100 Query Start:4 Query End:103 Subject Strand: POSITIVE Subject Start: 1 Subject End: 101 ...tcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtat............................................................................................................................................................. ...tcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_1393_SMT_1394|hypothetical protein:hypothetical protein predicted by Glimmer/Critica|POSITIVE:POSITIVE|[1369621,1370215]|595 HSP 1 e-value: 3.0E-21 bit: 103.0 Len: 103 Query Start:1 Query End:103 Subject Strand: NEGATIVE Subject Start: 152 Subject End: 255 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtat............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_1138_SMT_1139|hypothetical protein:rRNA (guanine-N1-)- methyltransferase|NEGATIVE:POSITIVE|[1079638, 1079894]|257 HSP 1 e-value: 3.0E-21 bit: 103.0 Len: 103 Query Start:1 Query End:103 Subject Strand: POSITIVE Subject Start: 76 Subject End: 179 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtat............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_1068_SMT_1069|ATP-dependent DNA helicase RecG:acetyl xylan esterase, putative|POSITIVE:POSITIVE|[1009047,1009469]|423 HSP 1 e-value: 3.0E-21 bit: 103.0 Len: 103 Query Start:1 Query End:103 Subject Strand: POSITIVE Subject Start: 22 Subject End: 125 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtat............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_662_SMT_663|A/G-specific adenine glycosylase:phosphate acetyltransferase|NEGATIVE:NEGATIVE|[573918,574105]|188 HSP 1 e-value: 1.0E-20 bit: 101.0 Len: 102 Query Start:1 Query End:102 Subject Strand: NEGATIVE Subject Start: 50 Subject End: 152 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagta.............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagta.............................................................................................................................................................. Subject: smit_SMT_1766_SMT_1767|sucrose-6-phosphate hydrolase:oxidoreductase, short chain dehydrogenase/reductase family|POSITIVE:NEGATIVE|[1743162,1743332]|171 HSP 1 e-value: 7.0E-19 bit: 95.6 Len: 103 Query Start:1 Query End:103 Subject Strand: NEGATIVE Subject Start: 7 Subject End: 110 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtat............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactaggaagctagtcgcaagctgtacttgagtacggtgaggcgacgctgacgtggtttgaatttgattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_698_SMT_699|uracil permease:K03106 signal recognition particle, subunit SRP54|POSITIVE:NEGATIVE|[609830,610030]|201 HSP 1 e-value: 3.0E-18 bit: 93.7 Len: 102 Query Start:1 Query End:102 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 103 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagta.............................................................................................................................................................. tactcaatgaaaatcaaagaacaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagta.............................................................................................................................................................. Subject: smit_SMT_1814_SMT_1815|amino acid transporter:K02035 peptide/nickel transport system substrate-binding protein|POSITIVE:NEGATIVE|[1788701,1788988]|288 HSP 1 e-value: 7.0E-13 bit: 75.8 Len: 46 Query Start:1 Query End:46 Subject Strand: POSITIVE Subject Start: 69 Subject End: 114 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 27 Query Start:77 Query End:103 Subject Strand: POSITIVE Subject Start: 237 Subject End: 263 ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_1075_SMT_1076|hypothetical protein:2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase / dihydroneopterin aldolase|POSITIVE:NEGATIVE|[1013931,1014090]|160 HSP 1 e-value: 7.0E-13 bit: 75.8 Len: 46 Query Start:1 Query End:46 Subject Strand: POSITIVE Subject Start: 1 Subject End: 46 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-8 bit: 61.9 Len: 39 Query Start:67 Query End:105 Subject Strand: POSITIVE Subject Start: 77 Subject End: 115 ..................................................................gaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... ..................................................................gaagctgacgtggtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: smit_SMT_763_SMT_764|alpha-amylase:alanyl-tRNA synthetase|POSITIVE:NEGATIVE|[669341,669584]|244 HSP 1 e-value: 7.0E-13 bit: 75.8 Len: 46 Query Start:1 Query End:46 Subject Strand: POSITIVE Subject Start: 87 Subject End: 132 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-7 bit: 56.0 Len: 48 Query Start:56 Query End:103 Subject Strand: POSITIVE Subject Start: 190 Subject End: 237 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. .......................................................tacggcaaggtgaagctgacgttgtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_1871_SMT_1872|modification methylase, HemK family:K03217 preprotein translocase YidC subunit|NEGATIVE:NEGATIVE|[1830592,1830972]|381 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:3 Query End:46 Subject Strand: POSITIVE Subject Start: 147 Subject End: 190 ..ctcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... ..ctcaatgaaaatcaaagagcaaactaggaagctagtcgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-11 bit: 71.9 Len: 48 Query Start:56 Query End:103 Subject Strand: POSITIVE Subject Start: 291 Subject End: 338 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. .......................................................tacggcaaggcgaagctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_1356_SMT_1357|fibronectin-binding protein-like protein A:endo-beta-N- acetylglucosaminidase|POSITIVE:NEGATIVE|[1334330, 1334539]|210 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 51 Subject End: 94 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 6.0E-7 bit: 56.0 Len: 44 Query Start:60 Query End:103 Subject Strand: POSITIVE Subject Start: 156 Subject End: 199 ...........................................................ccaaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. ...........................................................ccaaggagacgctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_1144_SMT_1145|K02026 multiple sugar transport system permease protein:maltodextrose utilization protein MalA|POSITIVE:POSITIVE|[1089205,1089465]|261 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: NEGATIVE Subject Start: 97 Subject End: 140 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 39 Query Start:67 Query End:105 Subject Strand: NEGATIVE Subject Start: 26 Subject End: 64 ..................................................................gaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... ..................................................................gaagctgacgtggtttgaagaggttttcgaagagtataa........................................................................................................................................................... Subject: smit_SMT_1026_SMT_1027|sucrose phosphorylase:K02026 multiple sugar transport system permease protein|NEGATIVE:NEGATIVE|[962415,962730]|316 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: NEGATIVE Subject Start: 134 Subject End: 177 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 26 Query Start:80 Query End:105 Subject Strand: NEGATIVE Subject Start: 64 Subject End: 89 ...............................................................................tttgaagagattttcgaagagtataa........................................................................................................................................................... ...............................................................................tttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: smit_SMT_451_SMT_452|thiamine-phosphate pyrophosphorylase:phosphomethylpyrimidine kinase|POSITIVE:NEGATIVE|[389708,389866]|159 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 5 Subject End: 48 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagtcgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 27 Query Start:79 Query End:105 Subject Strand: POSITIVE Subject Start: 92 Subject End: 118 ..............................................................................gtttgaagagattttcgaagagtataa........................................................................................................................................................... ..............................................................................gtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: smit_SMT_365_SMT_366|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[301808,302224]|417 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 46 Query Start:1 Query End:46 Subject Strand: NEGATIVE Subject Start: 348 Subject End: 393 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctggccgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-8 bit: 60.0 Len: 50 Query Start:56 Query End:105 Subject Strand: NEGATIVE Subject Start: 242 Subject End: 291 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... .......................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: smit_SMT_1625_SMT_1626|DNA polymerase IV:undecaprenyl- diphosphatase|POSITIVE:NEGATIVE|[1615127,1615272]|146 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:3 Query End:46 Subject Strand: POSITIVE Subject Start: 3 Subject End: 46 ..ctcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... ..ctcaatgaaaatcaaagagcaaactagaaagctagccgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 27 Query Start:79 Query End:105 Subject Strand: POSITIVE Subject Start: 88 Subject End: 114 ..............................................................................gtttgaagagattttcgaagagtataa........................................................................................................................................................... ..............................................................................gtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: smit_SMT_1591_SMT_1592|DNA-entry nuclease:putative hemolysin|POSITIVE:POSITIVE|[1579529,1579794]|266 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 82 Subject End: 125 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagtgcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 6.0E-7 bit: 56.0 Len: 36 Query Start:68 Query End:103 Subject Strand: POSITIVE Subject Start: 158 Subject End: 193 ...................................................................aagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. ...................................................................aagctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_162_SMT_163|hypothetical protein:cardiolipin synthetase|POSITIVE:POSITIVE|[107195,107448]|254 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:1 Query End:44 Subject Strand: NEGATIVE Subject Start: 190 Subject End: 233 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaagcaaagagcaaactaggaagctagtcgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 2.0E-7 bit: 58.0 Len: 37 Query Start:67 Query End:103 Subject Strand: NEGATIVE Subject Start: 121 Subject End: 157 ..................................................................gaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. ..................................................................gaagctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_1597_SMT_1598|K02032 peptide/nickel transport system ATP-binding protein:malolactic regulator, LysR family|POSITIVE:NEGATIVE|[1588048,1588450]|403 HSP 1 e-value: 1.0E-8 bit: 61.9 Len: 43 Query Start:2 Query End:44 Subject Strand: NEGATIVE Subject Start: 303 Subject End: 345 .actcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ .actcaatgaaaatcaaaaagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 27 Query Start:77 Query End:103 Subject Strand: NEGATIVE Subject Start: 235 Subject End: 261 ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_1604_SMT_1605|K05833 putative ABC transport system ATP-binding protein:hypothetical protein|POSITIVE:POSITIVE|[1595224,1595545]|322 HSP 1 e-value: 4.0E-8 bit: 60.0 Len: 46 Query Start:1 Query End:46 Subject Strand: NEGATIVE Subject Start: 136 Subject End: 181 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcactgaaaatcaaagagcaaactaggaagctagccacaggct...................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 26 Query Start:78 Query End:103 Subject Strand: NEGATIVE Subject Start: 70 Subject End: 95 .............................................................................ggtttgaagagattttcgaagagtat............................................................................................................................................................. .............................................................................ggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: smit_SMT_950_SMT_951|UDP-glucose 4-epimerase:oxidoreductase, DadA family protein/D-amino acid oxidase|NEGATIVE:NEGATIVE|[898787,899084]|298 HSP 1 e-value: 4.0E-8 bit: 60.0 Len: 46 Query Start:61 Query End:106 Subject Strand: NEGATIVE Subject Start: 102 Subject End: 147 ............................................................caaggcgaagctggcatggtttgaagagattttcgaagagtataag.......................................................................................................................................................... ............................................................caaggcgacgttgacatggtttgaagagattttcaaagagtataag.......................................................................................................................................................... HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 46 Query Start:1 Query End:46 Subject Strand: NEGATIVE Subject Start: 253 Subject End: 298 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagaacaaactaggaaactagctgcaggct...................................................................................................................................................................................................................... Inter-species Hit: Count: 115 Min: 1 Max: 228 Len: 228 Subject: NC_008533_SPD_0260_SPD_0261|ribosomal small subunit pseudouridine synthase A:aminopeptidase C|POSITIVE:POSITIVE|[258814,259029]|216 HSP 1 e-value: 2.0E-31 bit: 137.0 Len: 105 Query Start:1 Query End:105 Subject Strand: POSITIVE Subject Start: 11 Subject End: 115 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: NC_003028_SP_0292_SP_0293|bifunctional folate synthesis protein:hypothetical protein|POSITIVE:NEGATIVE|[271230,271378]|149 HSP 1 e-value: 2.0E-31 bit: 137.0 Len: 105 Query Start:1 Query End:105 Subject Strand: NEGATIVE Subject Start: 45 Subject End: 149 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: NC_008533_SPD_1158_SPD_1159|NADP-specific glutamate dehydrogenase:hypothetical protein|POSITIVE:NEGATIVE|[1188350,1188844]|495 HSP 1 e-value: 3.0E-30 bit: 133.0 Len: 103 Query Start:1 Query End:103 Subject Strand: POSITIVE Subject Start: 211 Subject End: 313 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactaggaagcgagtcgcaggctgtacttgagtacggcaaggcaaagctgacgtggtttgaagagattttcaaagagtat............................................................................................................................................................. Subject: NC_003098_spr1181_spr1182|glutamate dehydrogenase:hypothetical protein|POSITIVE:NEGATIVE|[1180819,1181313]|495 HSP 1 e-value: 3.0E-30 bit: 133.0 Len: 103 Query Start:1 Query End:103 Subject Strand: POSITIVE Subject Start: 211 Subject End: 313 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactaggaagcgagtcgcaggctgtacttgagtacggcaaggcaaagctgacgtggtttgaagagattttcaaagagtat............................................................................................................................................................. Subject: NC_003028_SP_1180_SP_1181|ribonucleotide-diphosphate reductase beta subunit:hypothetical protein|POSITIVE:NEGATIVE|[1119540,1119753]|214 HSP 1 e-value: 8.0E-28 bit: 125.0 Len: 102 Query Start:1 Query End:102 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 103 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagta.............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagta.............................................................................................................................................................. Subject: NC_003028_SP_1306_SP_1307|glutamate dehydrogenase:hypothetical protein|POSITIVE:NEGATIVE|[1233949,1234453]|505 HSP 1 e-value: 2.0E-25 bit: 117.0 Len: 103 Query Start:1 Query End:103 Subject Strand: POSITIVE Subject Start: 221 Subject End: 323 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactaggaagcgagccgcaggctgtacttgagtacggtaaagcaaagctgacgtggtttgaagagattttcaaagagtat............................................................................................................................................................. Subject: NC_003028_SP_1472_SP_1473|oxidoreductase, putative:hypothetical protein|POSITIVE:NEGATIVE|[1386055,1386276]|222 HSP 1 e-value: 1.0E-23 bit: 111.0 Len: 103 Query Start:1 Query End:103 Subject Strand: POSITIVE Subject Start: 117 Subject End: 220 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtat............................................................................................................................................................. tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttaagtacggcaaggtgaagctgacgtggtttgaatttgattttcgaagagtat............................................................................................................................................................. Subject: NC_008533_SPD_1495_SPD_1496|sugar ABC transporter, sugar-binding protein:PTS system, IIBC components|NEGATIVE:NEGATIVE|[1512092,1512215]|124 HSP 1 e-value: 5.0E-23 bit: 109.0 Len: 123 Query Start:106 Query End:228 Subject Strand: NEGATIVE Subject Start: 2 Subject End: 124 .........................................................................................................gtacttactgacttaataaaaaacagaggagagtggtggatgcatcggatgaaatgaaaacgcataccaataccatcttactcattatcccatatggatacgcttattacataggagaataca................................ .........................................................................................................gtacttactgacttaataaaaaacagaggagagtgatggatgagtaggatgaaatgaaatcgcatacaagaaataaagaactcattatccaagttggatacgcttattacataggagaataca................................ Subject: NC_003098_spr1527_spr1528|ABC transporter substrate-binding protein - sugar transport:Phosphotransferase system sugar-specific EII component|NEGATIVE:NEGATIVE|[1504561,1504684]|124 HSP 1 e-value: 5.0E-23 bit: 109.0 Len: 123 Query Start:106 Query End:228 Subject Strand: NEGATIVE Subject Start: 2 Subject End: 124 .........................................................................................................gtacttactgacttaataaaaaacagaggagagtggtggatgcatcggatgaaatgaaaacgcataccaataccatcttactcattatcccatatggatacgcttattacataggagaataca................................ .........................................................................................................gtacttactgacttaataaaaaacagaggagagtgatggatgagtaggatgaaatgaaatcgcatacaagaaataaagaactcattatccaagttggatacgcttattacataggagaataca................................ Subject: NC_003028_SP_1683_SP_1684|sugar ABC transporter, sugar-binding protein:PTS system, IIBC components|NEGATIVE:NEGATIVE|[1583496,1583619]|124 HSP 1 e-value: 5.0E-23 bit: 109.0 Len: 123 Query Start:106 Query End:228 Subject Strand: NEGATIVE Subject Start: 2 Subject End: 124 .........................................................................................................gtacttactgacttaataaaaaacagaggagagtggtggatgcatcggatgaaatgaaaacgcataccaataccatcttactcattatcccatatggatacgcttattacataggagaataca................................ .........................................................................................................gtacttactgacttaataaaaaacagaggagagtgatggatgagtaggatgaaatgaaatcgcatacaagaaataaagaactcattatccaagttggatacgcttattacataggagaataca................................ Subject: NC_003028_SP_2183_SP_2184|hypothetical protein:glycerol uptake facilitator protein|NEGATIVE:NEGATIVE|[2101749,2102044]|296 HSP 1 e-value: 2.0E-22 bit: 107.0 Len: 105 Query Start:1 Query End:105 Subject Strand: POSITIVE Subject Start: 190 Subject End: 295 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtataa........................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagtataa........................................................................................................................................................... Subject: NC_003028_SP_0280_SP_0281|ribosomal small subunit pseudouridine synthase A:aminopeptidase C|POSITIVE:POSITIVE|[258312,258528]|217 HSP 1 e-value: 2.0E-22 bit: 107.0 Len: 105 Query Start:1 Query End:105 Subject Strand: POSITIVE Subject Start: 11 Subject End: 116 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtataa........................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagtataa........................................................................................................................................................... Subject: NC_008533_SPD_0710_SPD_0711|septation ring formation regulator EzrA:hypothetical protein|POSITIVE:POSITIVE|[727105,727897]|793 HSP 1 e-value: 7.0E-22 bit: 105.0 Len: 105 Query Start:1 Query End:105 Subject Strand: NEGATIVE Subject Start: 133 Subject End: 237 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... tactaaatgaaaatcaaaaagcaaactaagaagctagcctcaggctgtacttgagtacggtaaggcgacgctgacgtgatttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: NC_003028_SP_0807_SP_0809|septation ring formation regulator EzrA:hypothetical protein|POSITIVE:POSITIVE|[764244,764778]|535 HSP 1 e-value: 2.0E-19 bit: 97.6 Len: 105 Query Start:1 Query End:105 Subject Strand: NEGATIVE Subject Start: 133 Subject End: 237 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... tactaaatgaaaatcaaaaagcaaactaagaagctagcctcaggctgtacttgagtacggtaaggcgacgctgacgtgatttgaaaagattttcgaagagtataa........................................................................................................................................................... Subject: NC_003028_SP_1107_SP_1108|50S ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[1038201,1038545]|345 HSP 1 e-value: 2.0E-16 bit: 87.7 Len: 103 Query Start:1 Query End:103 Subject Strand: NEGATIVE Subject Start: 145 Subject End: 248 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtat............................................................................................................................................................. tactcaatgaaaattaaagtgcaaactaggaagttagccgcaggctgtacttgagtacggcaaggtgaaattgacatggtttgaatttgattttcgaagagtat............................................................................................................................................................. Subject: NC_003028_SP_1680_SP_1681|hypothetical protein:sugar ABC transporter, permease protein|NEGATIVE:NEGATIVE|[1579923,1580193]|271 HSP 1 e-value: 3.0E-15 bit: 83.8 Len: 102 Query Start:1 Query End:102 Subject Strand: POSITIVE Subject Start: 170 Subject End: 271 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagta.............................................................................................................................................................. tactcaatgaaaattgaagaacaaactaggaagctaaccgcaggcaatacttaagtatggcaaggtgaagctgacgtagtttgaagagattttcgcagagta.............................................................................................................................................................. Subject: NC_008533_SPD_0991_SPD_0992|ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[1002301,1002645]|345 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 103 Query Start:1 Query End:103 Subject Strand: NEGATIVE Subject Start: 145 Subject End: 248 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtat............................................................................................................................................................. tactcaatgaaaattaaagtgcaaactaggaagttagccgcaggctgtacttgagtacggcaaggtgaaattgacgtggtttgaatttgattttcgaagagtat............................................................................................................................................................. Subject: NC_003098_spr1014_spr1015|50S ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[994770,995114]|345 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 103 Query Start:1 Query End:103 Subject Strand: NEGATIVE Subject Start: 145 Subject End: 248 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagtat............................................................................................................................................................. tactcaatgaaaattaaagtgcaaactaggaagttagccgcaggctgtacttgagtacggcaaggtgaaattgacgtggtttgaatttgattttcgaagagtat............................................................................................................................................................. Subject: NC_008533_SPD_1193_SPD_1194|peptide methionine sulfoxide reductase msrA/msrB 1:homoserine kinase|NEGATIVE:NEGATIVE|[1222081,1222375]|295 HSP 1 e-value: 7.0E-13 bit: 75.8 Len: 46 Query Start:1 Query End:46 Subject Strand: NEGATIVE Subject Start: 181 Subject End: 226 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 27 Query Start:77 Query End:103 Subject Strand: NEGATIVE Subject Start: 32 Subject End: 58 ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_008533_SPD_0549_SPD_0550|lipoprotein, putative:ribosomal protein L11|POSITIVE:POSITIVE|[561971,562278]|308 HSP 1 e-value: 7.0E-13 bit: 75.8 Len: 46 Query Start:1 Query End:46 Subject Strand: NEGATIVE Subject Start: 138 Subject End: 183 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-7 bit: 58.0 Len: 41 Query Start:62 Query End:102 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 41 .............................................................aaggcgaagctggcatggtttgaagagattttcgaagagta.............................................................................................................................................................. .............................................................aaggcgacgctgacgtggtttgaagagattttcgaagagta.............................................................................................................................................................. Subject: NC_003098_spr1217_spr1218|bifunctional methionine sulfoxide reductase A/B protein:homoserine kinase|NEGATIVE:NEGATIVE|[1214550,1214844]|295 HSP 1 e-value: 7.0E-13 bit: 75.8 Len: 46 Query Start:1 Query End:46 Subject Strand: NEGATIVE Subject Start: 181 Subject End: 226 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 27 Query Start:77 Query End:103 Subject Strand: NEGATIVE Subject Start: 32 Subject End: 58 ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003098_spr0554_spr0555|hypothetical protein:50S ribosomal protein L11|POSITIVE:POSITIVE|[554441,554748]|308 HSP 1 e-value: 7.0E-13 bit: 75.8 Len: 46 Query Start:1 Query End:46 Subject Strand: NEGATIVE Subject Start: 138 Subject End: 183 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-7 bit: 58.0 Len: 41 Query Start:62 Query End:102 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 41 .............................................................aaggcgaagctggcatggtttgaagagattttcgaagagta.............................................................................................................................................................. .............................................................aaggcgacgctgacgtggtttgaagagattttcgaagagta.............................................................................................................................................................. Subject: NC_003028_SP_1359_SP_1360|bifunctional methionine sulfoxide reductase A/B protein:homoserine kinase|NEGATIVE:NEGATIVE|[1281932,1282225]|294 HSP 1 e-value: 7.0E-13 bit: 75.8 Len: 46 Query Start:1 Query End:46 Subject Strand: NEGATIVE Subject Start: 180 Subject End: 225 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 27 Query Start:77 Query End:103 Subject Strand: NEGATIVE Subject Start: 32 Subject End: 58 ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003028_SP_0782_SP_0783|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[735967,736171]|205 HSP 1 e-value: 7.0E-13 bit: 75.8 Len: 46 Query Start:1 Query End:46 Subject Strand: NEGATIVE Subject Start: 104 Subject End: 149 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 47 Query Start:56 Query End:102 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 47 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagta.............................................................................................................................................................. .......................................................tacggcaaggcaaagctgacgcggtttgaagagattttcgaagagta.............................................................................................................................................................. Subject: NC_003028_SP_0629_SP_0630|hypothetical protein:50S ribosomal protein L11|POSITIVE:POSITIVE|[596487,596794]|308 HSP 1 e-value: 7.0E-13 bit: 75.8 Len: 46 Query Start:1 Query End:46 Subject Strand: NEGATIVE Subject Start: 138 Subject End: 183 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-7 bit: 58.0 Len: 41 Query Start:62 Query End:102 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 41 .............................................................aaggcgaagctggcatggtttgaagagattttcgaagagta.............................................................................................................................................................. .............................................................aaggcgacgctgacgtggtttgaagagattttcgaagagta.............................................................................................................................................................. Subject: NC_003028_SP_0482_SP_0483|hypothetical protein:ABC transporter, ATP-binding protein|POSITIVE:POSITIVE|[463540,463904]|365 HSP 1 e-value: 7.0E-13 bit: 75.8 Len: 50 Query Start:56 Query End:105 Subject Strand: POSITIVE Subject Start: 148 Subject End: 197 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... .......................................................tacggcaaggcgaagctgacgtggtttgaagagattttcgaagagtataa........................................................................................................................................................... HSP 2 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 1 Subject End: 44 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ Subject: NC_008533_SPD_1931_SPD_1932|hypothetical protein:maltodextrin phosphorylase|POSITIVE:NEGATIVE|[1902224,1903267]|1044 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 934 Subject End: 977 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 35 Query Start:68 Query End:102 Subject Strand: POSITIVE Subject Start: 1010 Subject End: 1044 ...................................................................aagctggcatggtttgaagagattttcgaagagta.............................................................................................................................................................. ...................................................................aagctgacgtggtttgaagagattttcgaagagta.............................................................................................................................................................. Subject: NC_008533_SPD_1086_SPD_1087|A/G-specific adenine glycosylase:formate--tetrahydrofolate ligase|NEGATIVE:NEGATIVE|[1117070,1117397]|328 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 91 Subject End: 134 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 50 Query Start:56 Query End:105 Subject Strand: POSITIVE Subject Start: 195 Subject End: 244 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... .......................................................tacggcaaggtgaagctgacgtagtttgaaaagattttcgaagagtataa........................................................................................................................................................... Subject: NC_008533_SPD_0790_SPD_0791|pyruvate kinase:hypothetical protein|POSITIVE:NEGATIVE|[809280,810395]|1116 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: NEGATIVE Subject Start: 207 Subject End: 250 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-8 bit: 60.0 Len: 42 Query Start:62 Query End:103 Subject Strand: NEGATIVE Subject Start: 102 Subject End: 143 .............................................................aaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. .............................................................aaggcgacgctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_008533_SPD_0486_SPD_0487|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[494216,494515]|300 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: NEGATIVE Subject Start: 245 Subject End: 288 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 45 Query Start:61 Query End:105 Subject Strand: NEGATIVE Subject Start: 93 Subject End: 137 ............................................................caaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... ............................................................caaggtgaagctgacgtggtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: NC_003098_spr1924_spr1925|aspartyl-tRNA synthetase:hypothetical protein|NEGATIVE:NEGATIVE|[1908629,1908979]|351 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: NEGATIVE Subject Start: 273 Subject End: 316 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-8 bit: 60.0 Len: 42 Query Start:62 Query End:103 Subject Strand: NEGATIVE Subject Start: 122 Subject End: 163 .............................................................aaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. .............................................................aaggcgacgctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003098_spr1915_spr1916|hypothetical protein:Maltodextrin phosphorylase|POSITIVE:NEGATIVE|[1894692,1895735]|1044 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 934 Subject End: 977 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 35 Query Start:68 Query End:102 Subject Strand: POSITIVE Subject Start: 1010 Subject End: 1044 ...................................................................aagctggcatggtttgaagagattttcgaagagta.............................................................................................................................................................. ...................................................................aagctgacgtggtttgaagagattttcgaagagta.............................................................................................................................................................. Subject: NC_003098_spr1709_spr1710|Dextransucrase (sucrose 6-glucosyltransferase):ABC transporter membrane spanning permease - multiple sugars|NEGATIVE:NEGATIVE|[1682434,1682790]|357 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: NEGATIVE Subject Start: 314 Subject End: 357 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 51 Query Start:56 Query End:106 Subject Strand: NEGATIVE Subject Start: 205 Subject End: 255 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataag.......................................................................................................................................................... .......................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtataag.......................................................................................................................................................... Subject: NC_003098_spr1108_spr1109|Similar to A/G-specific adenine glycosylase:Formate--tetrahydrofolate ligase|NEGATIVE:NEGATIVE|[1109539,1109866]|328 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 91 Subject End: 134 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 50 Query Start:56 Query End:105 Subject Strand: POSITIVE Subject Start: 195 Subject End: 244 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... .......................................................tacggcaaggtgaagctgacgtagtttgaaaagattttcgaagagtataa........................................................................................................................................................... Subject: NC_003098_spr1081_spr1082|hypothetical protein:GTP-binding protein LepA|NEGATIVE:NEGATIVE|[1076753,1077368]|616 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 378 Subject End: 421 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:62 Query End:105 Subject Strand: POSITIVE Subject Start: 486 Subject End: 529 .............................................................aaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... .............................................................aaggcgacgctgacgtggtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: NC_003098_spr0797_spr0798|pyruvate kinase:hypothetical protein|POSITIVE:NEGATIVE|[801749,802864]|1116 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: NEGATIVE Subject Start: 207 Subject End: 250 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-8 bit: 60.0 Len: 42 Query Start:62 Query End:103 Subject Strand: NEGATIVE Subject Start: 102 Subject End: 143 .............................................................aaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. .............................................................aaggcgacgctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003098_spr0696_spr0697|methionine--tRNA ligase:hypothetical protein|POSITIVE:POSITIVE|[698465,698791]|327 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 44 Subject End: 87 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 27 Query Start:77 Query End:103 Subject Strand: POSITIVE Subject Start: 212 Subject End: 238 ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003098_spr0484_spr0485|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[486549,486985]|437 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: NEGATIVE Subject Start: 382 Subject End: 425 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 45 Query Start:61 Query End:105 Subject Strand: NEGATIVE Subject Start: 230 Subject End: 274 ............................................................caaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... ............................................................caaggtgaagctgacgtggtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: NC_003028_SP_2114_SP_2115|aspartyl-tRNA synthetase:hypothetical protein|NEGATIVE:NEGATIVE|[2029292,2029642]|351 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: NEGATIVE Subject Start: 273 Subject End: 316 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-8 bit: 60.0 Len: 42 Query Start:62 Query End:103 Subject Strand: NEGATIVE Subject Start: 122 Subject End: 163 .............................................................aaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. .............................................................aaggcgacgctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003028_SP_1894_SP_1895|sucrose phosphorylase:sugar ABC transporter, permease protein|NEGATIVE:NEGATIVE|[1801040,1801396]|357 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: NEGATIVE Subject Start: 314 Subject End: 357 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 51 Query Start:56 Query End:106 Subject Strand: NEGATIVE Subject Start: 205 Subject End: 255 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataag.......................................................................................................................................................... .......................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtataag.......................................................................................................................................................... Subject: NC_003028_SP_1717_SP_1718|ABC transporter, ATP-binding protein:hypothetical protein|NEGATIVE:NEGATIVE|[1621815,1622204]|390 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 48 Query Start:56 Query End:103 Subject Strand: POSITIVE Subject Start: 264 Subject End: 311 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. .......................................................tacggcaaggcgaagctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 37 Query Start:1 Query End:37 Subject Strand: POSITIVE Subject Start: 117 Subject End: 153 tactcaatgaaaatcaaagagcaaactgggaagctag............................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctag............................................................................................................................................................................................................................... Subject: NC_003028_SP_1600_SP_1601|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1504655,1504893]|239 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 128 Subject End: 171 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 26 Query Start:77 Query End:102 Subject Strand: POSITIVE Subject Start: 214 Subject End: 239 ............................................................................tggtttgaagagattttcgaagagta.............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagta.............................................................................................................................................................. Subject: NC_003028_SP_1228_SP_1229|A/G-specific adenine glycosylase:formate--tetrahydrofolate ligase|NEGATIVE:NEGATIVE|[1161361,1161717]|357 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 121 Subject End: 164 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-8 bit: 60.0 Len: 50 Query Start:56 Query End:105 Subject Strand: POSITIVE Subject Start: 224 Subject End: 273 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... .......................................................tacggcaaggtgaagctgacgtagtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: NC_003028_SP_0897_SP_0899|pyruvate kinase:hypothetical protein|POSITIVE:POSITIVE|[852843,854645]|1803 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: NEGATIVE Subject Start: 203 Subject End: 246 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-8 bit: 60.0 Len: 42 Query Start:62 Query End:103 Subject Strand: NEGATIVE Subject Start: 98 Subject End: 139 .............................................................aaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. .............................................................aaggcgacgctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003028_SP_0788_SP_0789|methionine--tRNA ligase:hypothetical protein|POSITIVE:POSITIVE|[743783,744247]|465 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 44 Subject End: 87 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 6.0E-7 bit: 56.0 Len: 40 Query Start:64 Query End:103 Subject Strand: POSITIVE Subject Start: 334 Subject End: 373 ...............................................................ggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. ...............................................................ggcgacgctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003028_SP_0560_SP_0561|hypothetical protein:hypothetical protein|NEGATIVE:POSITIVE|[528030,528290]|261 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: NEGATIVE Subject Start: 206 Subject End: 249 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 45 Query Start:61 Query End:105 Subject Strand: NEGATIVE Subject Start: 54 Subject End: 98 ............................................................caaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... ............................................................caaggtgaagctgacgtggtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: NC_003028_SP_0387_SP_0389|DNA-binding response regulator:hypothetical protein|POSITIVE:POSITIVE|[367533,368450]|918 HSP 1 e-value: 1.0E-11 bit: 71.9 Len: 44 Query Start:1 Query End:44 Subject Strand: NEGATIVE Subject Start: 460 Subject End: 503 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 27 Query Start:77 Query End:103 Subject Strand: NEGATIVE Subject Start: 392 Subject End: 418 ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_008533_SPD_1528_SPD_1530|ABC transporter, ATP-binding protein:hypothetical protein|NEGATIVE:POSITIVE|[1550754,1552061]|1308 HSP 1 e-value: 4.0E-11 bit: 69.9 Len: 43 Query Start:61 Query End:103 Subject Strand: POSITIVE Subject Start: 268 Subject End: 310 ............................................................caaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. ............................................................caaggcgaagctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 46 Query Start:1 Query End:46 Subject Strand: POSITIVE Subject Start: 116 Subject End: 161 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaagcaaagagcgaactaggaagctagccgtaggct...................................................................................................................................................................................................................... Subject: NC_008533_SPD_1201_SPD_1202|phosphotransferase LicD3:Psr protein|NEGATIVE:NEGATIVE|[1231002,1231279]|278 HSP 1 e-value: 4.0E-11 bit: 69.9 Len: 51 Query Start:56 Query End:106 Subject Strand: NEGATIVE Subject Start: 120 Subject End: 170 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataag.......................................................................................................................................................... .......................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtataag.......................................................................................................................................................... HSP 2 e-value: 2.0E-10 bit: 67.9 Len: 46 Query Start:1 Query End:46 Subject Strand: NEGATIVE Subject Start: 228 Subject End: 273 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagtgcaaactaggaagctagccgcaggct...................................................................................................................................................................................................................... Subject: NC_008533_SPD_0353_SPD_0355|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[356986,357757]|772 HSP 1 e-value: 4.0E-11 bit: 69.9 Len: 43 Query Start:1 Query End:43 Subject Strand: NEGATIVE Subject Start: 315 Subject End: 357 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcag......................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgcag......................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 27 Query Start:77 Query End:103 Subject Strand: NEGATIVE Subject Start: 246 Subject End: 272 ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003098_spr1225_spr1226|LicD1 paralog:hypothetical protein|NEGATIVE:NEGATIVE|[1223471,1223748]|278 HSP 1 e-value: 4.0E-11 bit: 69.9 Len: 51 Query Start:56 Query End:106 Subject Strand: NEGATIVE Subject Start: 120 Subject End: 170 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataag.......................................................................................................................................................... .......................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtataag.......................................................................................................................................................... HSP 2 e-value: 2.0E-10 bit: 67.9 Len: 46 Query Start:1 Query End:46 Subject Strand: NEGATIVE Subject Start: 228 Subject End: 273 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagtgcaaactaggaagctagccgcaggct...................................................................................................................................................................................................................... Subject: NC_003028_SP_2105_SP_2106|hypothetical protein:glycogen phosphorylase family protein|POSITIVE:NEGATIVE|[2015357,2016398]|1042 HSP 1 e-value: 4.0E-11 bit: 69.9 Len: 43 Query Start:1 Query End:43 Subject Strand: POSITIVE Subject Start: 933 Subject End: 975 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcag......................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgcag......................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 35 Query Start:68 Query End:102 Subject Strand: POSITIVE Subject Start: 1008 Subject End: 1042 ...................................................................aagctggcatggtttgaagagattttcgaagagta.............................................................................................................................................................. ...................................................................aagctgacgtggtttgaagagattttcgaagagta.............................................................................................................................................................. Subject: NC_003028_SP_1367_SP_1368|licD3 protein:psr protein|NEGATIVE:NEGATIVE|[1290910,1291187]|278 HSP 1 e-value: 4.0E-11 bit: 69.9 Len: 51 Query Start:56 Query End:106 Subject Strand: NEGATIVE Subject Start: 120 Subject End: 170 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataag.......................................................................................................................................................... .......................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtataag.......................................................................................................................................................... HSP 2 e-value: 2.0E-10 bit: 67.9 Len: 46 Query Start:1 Query End:46 Subject Strand: NEGATIVE Subject Start: 228 Subject End: 273 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagtgcaaactaggaagctagccgcaggct...................................................................................................................................................................................................................... Subject: NC_003028_SP_1199_SP_1200|hypothetical protein:GTP-binding protein LepA|NEGATIVE:NEGATIVE|[1132042,1132583]|542 HSP 1 e-value: 4.0E-11 bit: 69.9 Len: 43 Query Start:1 Query End:43 Subject Strand: POSITIVE Subject Start: 261 Subject End: 303 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcag......................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgcag......................................................................................................................................................................................................................... HSP 2 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:62 Query End:105 Subject Strand: POSITIVE Subject Start: 412 Subject End: 455 .............................................................aaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... .............................................................aaggcgacgctgacgtggtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: NC_008533_SPD_1968_SPD_1969|hypothetical protein:glycosyl hydrolase-related protein|NEGATIVE:NEGATIVE|[1937077,1937401]|325 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 46 Query Start:1 Query End:46 Subject Strand: POSITIVE Subject Start: 214 Subject End: 259 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagctgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-7 bit: 56.0 Len: 36 Query Start:67 Query End:102 Subject Strand: POSITIVE Subject Start: 290 Subject End: 325 ..................................................................gaagctggcatggtttgaagagattttcgaagagta.............................................................................................................................................................. ..................................................................gaagctgacgtggtttgaagagattttcgaagagta.............................................................................................................................................................. Subject: NC_008533_SPD_1458_SPD_1459|GTP pyrophosphokinase:metallo-beta-lactamase superfamily protein|NEGATIVE:POSITIVE|[1472689,1473682]|994 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 46 Query Start:1 Query End:46 Subject Strand: POSITIVE Subject Start: 855 Subject End: 900 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactagaaagctagccgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-7 bit: 56.0 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 295 Subject End: 338 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactaaatgaaaatcaaagagcaaactaggaaactagccgcagg........................................................................................................................................................................................................................ HSP 3 e-value: 2.0E-6 bit: 54.0 Len: 31 Query Start:79 Query End:109 Subject Strand: POSITIVE Subject Start: 942 Subject End: 972 ..............................................................................gtttgaagagattttcgaagagtataagtac....................................................................................................................................................... ..............................................................................gtttgaagagattttcgaagagtattagtac....................................................................................................................................................... Subject: NC_008533_SPD_1317_SPD_1318|hypothetical protein:translation elongation factor Tu|NEGATIVE:NEGATIVE|[1334112,1334494]|383 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 50 Query Start:56 Query End:105 Subject Strand: NEGATIVE Subject Start: 39 Subject End: 88 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... .......................................................tacgacaaggcgaagctgacgcggtttgaagagattttcgaagagtataa........................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 27 Query Start:1 Query End:27 Subject Strand: NEGATIVE Subject Start: 268 Subject End: 294 tactcaatgaaaatcaaagagcaaact......................................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaact......................................................................................................................................................................................................................................... Subject: NC_008533_SPD_1016_SPD_1017|exonuclease RexA:hypothetical protein|POSITIVE:POSITIVE|[1035936,1036104]|169 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 46 Query Start:61 Query End:106 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 46 ............................................................caaggcgaagctggcatggtttgaagagattttcgaagagtataag.......................................................................................................................................................... ............................................................caaggcgaagctgacgtggtttgaagagattttcaaagagtataag.......................................................................................................................................................... HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 42 Query Start:1 Query End:42 Subject Strand: NEGATIVE Subject Start: 112 Subject End: 153 tactcaatgaaaatcaaagagcaaactgggaagctaggcgca.......................................................................................................................................................................................................................... tactcaataaaaatcaaagagcaaactagaaagctagccgca.......................................................................................................................................................................................................................... Subject: NC_008533_SPD_0781_SPD_0782|hypothetical protein:type I restriction-modification system, M subunit, putative|POSITIVE:POSITIVE|[793779,794285]|507 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 50 Query Start:56 Query End:105 Subject Strand: POSITIVE Subject Start: 357 Subject End: 406 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... .......................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtataa........................................................................................................................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 41 Query Start:4 Query End:44 Subject Strand: POSITIVE Subject Start: 257 Subject End: 297 ...tcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ ...tcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ Subject: NC_008533_SPD_0409_SPD_0410|threonine dehydratase:hypothetical protein|POSITIVE:POSITIVE|[410381,411114]|734 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 42 Query Start:1 Query End:42 Subject Strand: NEGATIVE Subject Start: 143 Subject End: 184 tactcaatgaaaatcaaagagcaaactgggaagctaggcgca.......................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgca.......................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 27 Query Start:77 Query End:103 Subject Strand: NEGATIVE Subject Start: 73 Subject End: 99 ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003098_spr1948_spr1949|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1929575,1929899]|325 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 46 Query Start:1 Query End:46 Subject Strand: POSITIVE Subject Start: 214 Subject End: 259 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagctgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-7 bit: 56.0 Len: 36 Query Start:67 Query End:102 Subject Strand: POSITIVE Subject Start: 290 Subject End: 325 ..................................................................gaagctggcatggtttgaagagattttcgaagagta.............................................................................................................................................................. ..................................................................gaagctgacgtggtttgaagagattttcgaagagta.............................................................................................................................................................. Subject: NC_003098_spr1638_spr1639|hypothetical protein:Catabolite control protein|NEGATIVE:NEGATIVE|[1611092,1611987]|896 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 46 Query Start:1 Query End:46 Subject Strand: NEGATIVE Subject Start: 250 Subject End: 295 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaaactagccgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-7 bit: 56.0 Len: 28 Query Start:78 Query End:105 Subject Strand: NEGATIVE Subject Start: 99 Subject End: 126 .............................................................................ggtttgaagagattttcgaagagtataa........................................................................................................................................................... .............................................................................ggtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: NC_003098_spr1040_spr1041|First subunit of major exonuclease:hypothetical protein|POSITIVE:POSITIVE|[1028405,1028573]|169 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 46 Query Start:61 Query End:106 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 46 ............................................................caaggcgaagctggcatggtttgaagagattttcgaagagtataag.......................................................................................................................................................... ............................................................caaggcgaagctgacgtggtttgaagagattttcaaagagtataag.......................................................................................................................................................... HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 42 Query Start:1 Query End:42 Subject Strand: NEGATIVE Subject Start: 112 Subject End: 153 tactcaatgaaaatcaaagagcaaactgggaagctaggcgca.......................................................................................................................................................................................................................... tactcaataaaaatcaaagagcaaactagaaagctagccgca.......................................................................................................................................................................................................................... Subject: NC_003098_spr0789_spr0790|hypothetical protein:Type I restriction modification enzyme methylase subunit|POSITIVE:POSITIVE|[786248,786754]|507 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 50 Query Start:56 Query End:105 Subject Strand: POSITIVE Subject Start: 357 Subject End: 406 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... .......................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtataa........................................................................................................................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 41 Query Start:4 Query End:44 Subject Strand: POSITIVE Subject Start: 257 Subject End: 297 ...tcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ ...tcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ Subject: NC_003098_spr0429_spr0430|hypothetical protein:ABC transporter ATP-binding protein - cobalt transport|POSITIVE:POSITIVE|[429872,430191]|320 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 50 Query Start:56 Query End:105 Subject Strand: POSITIVE Subject Start: 103 Subject End: 152 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... .......................................................tacggcaaggcgaagctgatgtggtttgaagagattttcgaagagtataa........................................................................................................................................................... HSP 2 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 1 Subject End: 44 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagttagccgcagg........................................................................................................................................................................................................................ Subject: NC_003098_spr0406_spr0407|threonine dehydratase:hypothetical protein|POSITIVE:POSITIVE|[402852,403585]|734 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 42 Query Start:1 Query End:42 Subject Strand: NEGATIVE Subject Start: 143 Subject End: 184 tactcaatgaaaatcaaagagcaaactgggaagctaggcgca.......................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgca.......................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 27 Query Start:77 Query End:103 Subject Strand: NEGATIVE Subject Start: 73 Subject End: 99 ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003028_SP_1912_SP_1914|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1824972,1825659]|688 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 46 Query Start:1 Query End:46 Subject Strand: POSITIVE Subject Start: 88 Subject End: 133 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagaccaaactaggaagctagccgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-7 bit: 58.0 Len: 37 Query Start:67 Query End:103 Subject Strand: POSITIVE Subject Start: 208 Subject End: 244 ..................................................................gaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. ..................................................................gaagctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003028_SP_1645_SP_1646|GTP pyrophosphokinase:metallo-beta-lactamase superfamily protein|NEGATIVE:POSITIVE|[1543974,1544931]|958 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 46 Query Start:1 Query End:46 Subject Strand: POSITIVE Subject Start: 819 Subject End: 864 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactagaaagctagccgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-7 bit: 56.0 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 295 Subject End: 338 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactaaatgaaaatcaaagagcaaactaggaaactagccgcagg........................................................................................................................................................................................................................ HSP 3 e-value: 6.0E-7 bit: 56.0 Len: 32 Query Start:78 Query End:109 Subject Strand: POSITIVE Subject Start: 905 Subject End: 936 .............................................................................ggtttgaagagattttcgaagagtataagtac....................................................................................................................................................... .............................................................................ggtttgaagagattttcgaagagtattagtac....................................................................................................................................................... Subject: NC_003028_SP_1488_SP_1489|hypothetical protein:elongation factor Tu|NEGATIVE:NEGATIVE|[1398953,1399335]|383 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 50 Query Start:56 Query End:105 Subject Strand: NEGATIVE Subject Start: 39 Subject End: 88 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... .......................................................tacgacaaggcgaagctgacgcggtttgaagagattttcgaagagtataa........................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 27 Query Start:1 Query End:27 Subject Strand: NEGATIVE Subject Start: 268 Subject End: 294 tactcaatgaaaatcaaagagcaaact......................................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaact......................................................................................................................................................................................................................................... Subject: NC_003028_SP_1152_SP_1153|exonuclease RexA:hypothetical protein|POSITIVE:POSITIVE|[1082280,1082493]|214 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 46 Query Start:61 Query End:106 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 46 ............................................................caaggcgaagctggcatggtttgaagagattttcgaagagtataag.......................................................................................................................................................... ............................................................caaggcgaagctgacgtggtttgaagagattttcaaagagtataag.......................................................................................................................................................... HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 42 Query Start:1 Query End:42 Subject Strand: NEGATIVE Subject Start: 157 Subject End: 198 tactcaatgaaaatcaaagagcaaactgggaagctaggcgca.......................................................................................................................................................................................................................... tactcaataaaaatcaaagagcaaactagaaagctagccgca.......................................................................................................................................................................................................................... Subject: NC_003028_SP_0885_SP_0886|hypothetical protein:type I restriction-modification system, M subunit, putative|POSITIVE:POSITIVE|[834569,835074]|506 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 50 Query Start:56 Query End:105 Subject Strand: POSITIVE Subject Start: 356 Subject End: 405 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... .......................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtataa........................................................................................................................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 41 Query Start:4 Query End:44 Subject Strand: POSITIVE Subject Start: 257 Subject End: 297 ...tcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ ...tcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ Subject: NC_003028_SP_0450_SP_0451|threonine dehydratase:hypothetical protein|POSITIVE:POSITIVE|[422944,423677]|734 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 42 Query Start:1 Query End:42 Subject Strand: NEGATIVE Subject Start: 143 Subject End: 184 tactcaatgaaaatcaaagagcaaactgggaagctaggcgca.......................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagccgca.......................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 27 Query Start:77 Query End:103 Subject Strand: NEGATIVE Subject Start: 73 Subject End: 99 ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003028_SP_0095_SP_0096|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[97857,98130]|274 HSP 1 e-value: 2.0E-10 bit: 67.9 Len: 46 Query Start:1 Query End:46 Subject Strand: POSITIVE Subject Start: 54 Subject End: 99 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctagctgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-10 bit: 67.9 Len: 50 Query Start:56 Query End:105 Subject Strand: POSITIVE Subject Start: 157 Subject End: 206 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... .......................................................tacggcaaggcgaagctgacgcggtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: NC_008533_SPD_1663_SPD_1664|alpha,alpha-phosphotrehalase:PTS system, trehalose-specific IIABC components|NEGATIVE:NEGATIVE|[1675447,1675623]|177 HSP 1 e-value: 6.0E-10 bit: 65.9 Len: 37 Query Start:1 Query End:37 Subject Strand: POSITIVE Subject Start: 67 Subject End: 103 tactcaatgaaaatcaaagagcaaactgggaagctag............................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctag............................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 26 Query Start:77 Query End:102 Subject Strand: POSITIVE Subject Start: 152 Subject End: 177 ............................................................................tggtttgaagagattttcgaagagta.............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagta.............................................................................................................................................................. Subject: NC_008533_SPD_0539_SPD_0540|Ser/Thr protein phosphatase family protein:amino acid ABC transporter, amino acid-binding protein, putative|POSITIVE:NEGATIVE|[553789,553969]|181 HSP 1 e-value: 6.0E-10 bit: 65.9 Len: 37 Query Start:1 Query End:37 Subject Strand: POSITIVE Subject Start: 71 Subject End: 107 tactcaatgaaaatcaaagagcaaactgggaagctag............................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctag............................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 34 Query Start:68 Query End:101 Subject Strand: POSITIVE Subject Start: 147 Subject End: 180 ...................................................................aagctggcatggtttgaagagattttcgaagagt............................................................................................................................................................... ...................................................................aagctgacgtggtttgaagagattttcgaagagt............................................................................................................................................................... Subject: NC_003098_spr1698_spr1699|Dextran glucosidase:Phosphotransferase system, trehalose-specific IIBC component|NEGATIVE:NEGATIVE|[1667916,1668092]|177 HSP 1 e-value: 6.0E-10 bit: 65.9 Len: 37 Query Start:1 Query End:37 Subject Strand: POSITIVE Subject Start: 67 Subject End: 103 tactcaatgaaaatcaaagagcaaactgggaagctag............................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctag............................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 26 Query Start:77 Query End:102 Subject Strand: POSITIVE Subject Start: 152 Subject End: 177 ............................................................................tggtttgaagagattttcgaagagta.............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagta.............................................................................................................................................................. Subject: NC_003098_spr0544_spr0545|hypothetical protein:ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor precursor|POSITIVE:NEGATIVE|[546259,546439]|181 HSP 1 e-value: 6.0E-10 bit: 65.9 Len: 37 Query Start:1 Query End:37 Subject Strand: POSITIVE Subject Start: 71 Subject End: 107 tactcaatgaaaatcaaagagcaaactgggaagctag............................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctag............................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 34 Query Start:68 Query End:101 Subject Strand: POSITIVE Subject Start: 147 Subject End: 180 ...................................................................aagctggcatggtttgaagagattttcgaagagt............................................................................................................................................................... ...................................................................aagctgacgtggtttgaagagattttcgaagagt............................................................................................................................................................... Subject: NC_003028_SP_0619_SP_0620|hypothetical protein:amino acid ABC transporter, amino acid-binding protein, putative|POSITIVE:NEGATIVE|[588415,588595]|181 HSP 1 e-value: 6.0E-10 bit: 65.9 Len: 37 Query Start:1 Query End:37 Subject Strand: POSITIVE Subject Start: 71 Subject End: 107 tactcaatgaaaatcaaagagcaaactgggaagctag............................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctag............................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 34 Query Start:68 Query End:101 Subject Strand: POSITIVE Subject Start: 147 Subject End: 180 ...................................................................aagctggcatggtttgaagagattttcgaagagt............................................................................................................................................................... ...................................................................aagctgacgtggtttgaagagattttcgaagagt............................................................................................................................................................... Subject: NC_003028_SP_0120_SP_0121|glucose-inhibited division protein A:metallo-beta-lactamase superfamily protein|POSITIVE:NEGATIVE|[124699,125050]|352 HSP 1 e-value: 6.0E-10 bit: 65.9 Len: 37 Query Start:1 Query End:37 Subject Strand: NEGATIVE Subject Start: 251 Subject End: 287 tactcaatgaaaatcaaagagcaaactgggaagctag............................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaagctag............................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 26 Query Start:78 Query End:103 Subject Strand: NEGATIVE Subject Start: 138 Subject End: 163 .............................................................................ggtttgaagagattttcgaagagtat............................................................................................................................................................. .............................................................................ggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_008533_SPD_1568_SPD_1569|GTP cyclohydrolase, putative:aquaporin|POSITIVE:NEGATIVE|[1586901, 1587379]|479 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 6 Subject End: 49 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagttagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 3.0E-9 bit: 63.9 Len: 48 Query Start:56 Query End:103 Subject Strand: POSITIVE Subject Start: 378 Subject End: 425 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. .......................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_008533_SPD_1425_SPD_1426|transporter, major facilitator family protein:hypothetical protein|NEGATIVE:NEGATIVE|[1444487,1444725]|239 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 128 Subject End: 171 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactagaaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 26 Query Start:77 Query End:102 Subject Strand: POSITIVE Subject Start: 214 Subject End: 239 ............................................................................tggtttgaagagattttcgaagagta.............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagta.............................................................................................................................................................. Subject: NC_008533_SPD_0729_SPD_0730|hemolysin-related protein:purine nucleoside phosphorylase|POSITIVE:POSITIVE|[743379,744035]|657 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 100 Subject End: 143 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaaactagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-8 bit: 60.0 Len: 46 Query Start:60 Query End:105 Subject Strand: POSITIVE Subject Start: 205 Subject End: 250 ...........................................................ccaaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... ...........................................................ccaaggcgacgttgacgtggtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: NC_008533_SPD_0556_SPD_0558|hypothetical protein:cell wall-associated serine protease PrtA|POSITIVE:POSITIVE|[568719,569947]|1229 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:1 Query End:44 Subject Strand: NEGATIVE Subject Start: 961 Subject End: 1004 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaaactagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 1.0E-8 bit: 61.9 Len: 31 Query Start:77 Query End:107 Subject Strand: NEGATIVE Subject Start: 806 Subject End: 836 ............................................................................tggtttgaagagattttcgaagagtataagt......................................................................................................................................................... ............................................................................tggtttgaagagattttcgaagagtataagt......................................................................................................................................................... Subject: NC_008533_SPD_0099_SPD_0101|capsular polysaccharide biosynthesis protein:hydrolase, haloacid dehalogenase-like family protein|POSITIVE:NEGATIVE|[101068,101462]|395 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 52 Query Start:56 Query End:107 Subject Strand: NEGATIVE Subject Start: 63 Subject End: 114 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataagt......................................................................................................................................................... .......................................................tacggcaaggcgacgttgacgtggtttgaagagattttcgaagagtataagt......................................................................................................................................................... HSP 2 e-value: 2.0E-7 bit: 58.0 Len: 37 Query Start:1 Query End:37 Subject Strand: NEGATIVE Subject Start: 316 Subject End: 352 tactcaatgaaaatcaaagagcaaactgggaagctag............................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaaactag............................................................................................................................................................................................................................... Subject: NC_008533_SPD_0073_SPD_0074|hypothetical protein:phosphorylase, Pnp/Udp family protein, putative|POSITIVE:POSITIVE|[74338,75311]|974 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 52 Query Start:56 Query End:107 Subject Strand: NEGATIVE Subject Start: 212 Subject End: 263 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataagt......................................................................................................................................................... .......................................................tacggcaaggtgaaactgacgtggtttgaagagattttcgaagagtataagt......................................................................................................................................................... HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 46 Query Start:1 Query End:46 Subject Strand: NEGATIVE Subject Start: 365 Subject End: 410 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaattaaagtgcaaactaggaagttagccgcaggct...................................................................................................................................................................................................................... Subject: NC_003098_spr1922_spr1923|Maltose operon transcriptional repressor:hypothetical protein|POSITIVE:NEGATIVE|[1905655,1905945]|291 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 136 Subject End: 179 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagtgcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 42 Query Start:62 Query End:103 Subject Strand: POSITIVE Subject Start: 244 Subject End: 285 .............................................................aaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. .............................................................aaggcgacgctgacgtggtttgaagagattttcgaaaagtat............................................................................................................................................................. Subject: NC_003098_spr1603_spr1604|hypothetical protein:Aquaporin Z - water channel protein|POSITIVE:NEGATIVE|[1579370,1579848]|479 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 6 Subject End: 49 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagttagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 3.0E-9 bit: 63.9 Len: 48 Query Start:56 Query End:103 Subject Strand: POSITIVE Subject Start: 378 Subject End: 425 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. .......................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003098_spr1453_spr1454|Major facilitator superfamily transporter - efflux?:hypothetical protein|NEGATIVE:NEGATIVE|[1436956,1437194]|239 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 128 Subject End: 171 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactagaaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 26 Query Start:77 Query End:102 Subject Strand: POSITIVE Subject Start: 214 Subject End: 239 ............................................................................tggtttgaagagattttcgaagagta.............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagta.............................................................................................................................................................. Subject: NC_003098_spr0737_spr0738|Conserved hypothetical protein, truncation:Purine nucleoside phosphorylase (inosine phosphorylase)|POSITIVE:POSITIVE|[735848,736504]|657 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 100 Subject End: 143 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaaactagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-8 bit: 60.0 Len: 46 Query Start:60 Query End:105 Subject Strand: POSITIVE Subject Start: 205 Subject End: 250 ...........................................................ccaaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... ...........................................................ccaaggcgacgttgacgtggtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: NC_003098_spr0560_spr0561|hypothetical protein:Cell wall-associated serine proteinase precursor PrtA|POSITIVE:POSITIVE|[561687,562417]|731 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:1 Query End:44 Subject Strand: NEGATIVE Subject Start: 463 Subject End: 506 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaaactagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 1.0E-8 bit: 61.9 Len: 31 Query Start:77 Query End:107 Subject Strand: NEGATIVE Subject Start: 308 Subject End: 338 ............................................................................tggtttgaagagattttcgaagagtataagt......................................................................................................................................................... ............................................................................tggtttgaagagattttcgaagagtataagt......................................................................................................................................................... Subject: NC_003098_spr0092_spr0093|CapD protein, required for the biosynthesis of type 1 capsular polysaccharide:Phosphoglycolate phosphatase|POSITIVE:NEGATIVE|[101068,101462]|395 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 52 Query Start:56 Query End:107 Subject Strand: NEGATIVE Subject Start: 63 Subject End: 114 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataagt......................................................................................................................................................... .......................................................tacggcaaggcgacgttgacgtggtttgaagagattttcgaagagtataagt......................................................................................................................................................... HSP 2 e-value: 2.0E-7 bit: 58.0 Len: 37 Query Start:1 Query End:37 Subject Strand: NEGATIVE Subject Start: 316 Subject End: 352 tactcaatgaaaatcaaagagcaaactgggaagctag............................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaaactag............................................................................................................................................................................................................................... Subject: NC_003098_spr0067_spr0068|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[74337,75310]|974 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 52 Query Start:56 Query End:107 Subject Strand: NEGATIVE Subject Start: 212 Subject End: 263 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataagt......................................................................................................................................................... .......................................................tacggcaaggtgaaactgacgtggtttgaagagattttcgaagagtataagt......................................................................................................................................................... HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 46 Query Start:1 Query End:46 Subject Strand: NEGATIVE Subject Start: 365 Subject End: 410 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaattaaagtgcaaactaggaagttagccgcaggct...................................................................................................................................................................................................................... Subject: NC_003028_SP_2112_SP_2113|maltose operon transcriptional repressor:hypothetical protein|POSITIVE:NEGATIVE|[2026318,2026608]|291 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 136 Subject End: 179 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagtgcaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 3.0E-9 bit: 63.9 Len: 48 Query Start:56 Query End:103 Subject Strand: POSITIVE Subject Start: 238 Subject End: 285 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. .......................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003028_SP_2062_SP_2063|transcriptional regulator, MarR family:LysM domain-containing protein|NEGATIVE:NEGATIVE|[1963312,1963633]|322 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 130 Subject End: 173 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaaaagcaaactaggaagctagtcgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 27 Query Start:77 Query End:103 Subject Strand: POSITIVE Subject Start: 215 Subject End: 241 ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003028_SP_1872_SP_1873|iron-compound ABC transporter, iron-compound-binding protein:hypothetical protein|POSITIVE:NEGATIVE|[1778228,1778451]|224 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 22 Subject End: 65 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaaactagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 6.0E-7 bit: 56.0 Len: 28 Query Start:78 Query End:105 Subject Strand: POSITIVE Subject Start: 109 Subject End: 136 .............................................................................ggtttgaagagattttcgaagagtataa........................................................................................................................................................... .............................................................................ggtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: NC_003028_SP_1777_SP_1778|hypothetical protein:aquaporin|POSITIVE:NEGATIVE|[1695666, 1696188]|523 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 6 Subject End: 49 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagttagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 2.0E-7 bit: 58.0 Len: 37 Query Start:67 Query End:103 Subject Strand: POSITIVE Subject Start: 433 Subject End: 469 ..................................................................gaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. ..................................................................gaagctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003028_SP_1696_SP_1697|hypothetical protein:ATP-dependent DNA helicase RecG|NEGATIVE:NEGATIVE|[1600719,1600952]|234 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 36 Query Start:1 Query End:36 Subject Strand: NEGATIVE Subject Start: 178 Subject End: 213 tactcaatgaaaatcaaagagcaaactgggaagcta................................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaagcta................................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-8 bit: 60.0 Len: 42 Query Start:62 Query End:103 Subject Strand: NEGATIVE Subject Start: 18 Subject End: 59 .............................................................aaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. .............................................................aaggcgacgctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003028_SP_0457_SP_0458|undecaprenyl pyrophosphate phosphatase:DNA polymerase IV|POSITIVE:NEGATIVE|[430753,430898]|146 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:3 Query End:46 Subject Strand: NEGATIVE Subject Start: 101 Subject End: 144 ..ctcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... ..ctcaatgaaaatcaaagagcaaactaggaggctagccgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-7 bit: 56.0 Len: 28 Query Start:78 Query End:105 Subject Strand: NEGATIVE Subject Start: 33 Subject End: 60 .............................................................................ggtttgaagagattttcgaagagtataa........................................................................................................................................................... .............................................................................ggtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: NC_003028_SP_0145_SP_0146|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[143896,144439]|544 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:1 Query End:44 Subject Strand: NEGATIVE Subject Start: 437 Subject End: 480 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaatgaaaatcaaagagcaaactaggaaactagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 1.0E-5 bit: 52.0 Len: 42 Query Start:67 Query End:108 Subject Strand: NEGATIVE Subject Start: 236 Subject End: 277 ..................................................................gaagctggcatggtttgaagagattttcgaagagtataagta........................................................................................................................................................ ..................................................................gaagctgacgtggtttgaagagagtttcgaagagtacaagta........................................................................................................................................................ Subject: NC_003028_SP_0103_SP_0104|capsular polysaccharide biosynthesis protein, putative:hydrolase, haloacid dehalogenase-like family|POSITIVE:NEGATIVE|[106519,106955]|437 HSP 1 e-value: 3.0E-9 bit: 63.9 Len: 52 Query Start:56 Query End:107 Subject Strand: NEGATIVE Subject Start: 63 Subject End: 114 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataagt......................................................................................................................................................... .......................................................tacggcaaggcgacgttgacgtggtttgaagagattttcgaagagtataagt......................................................................................................................................................... HSP 2 e-value: 2.0E-7 bit: 58.0 Len: 37 Query Start:1 Query End:37 Subject Strand: NEGATIVE Subject Start: 358 Subject End: 394 tactcaatgaaaatcaaagagcaaactgggaagctag............................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaaactag............................................................................................................................................................................................................................... Subject: NC_008533_SPD_1652_SPD_1653|iron-compound ABC transporter, iron-compound-binding protein:conserved hypothetical protein TIGR00278|POSITIVE:NEGATIVE|[1667285,1667508]|224 HSP 1 e-value: 1.0E-8 bit: 61.9 Len: 43 Query Start:1 Query End:43 Subject Strand: POSITIVE Subject Start: 22 Subject End: 64 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcag......................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaaactagccgcag......................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-7 bit: 56.0 Len: 28 Query Start:78 Query End:105 Subject Strand: POSITIVE Subject Start: 109 Subject End: 136 .............................................................................ggtttgaagagattttcgaagagtataa........................................................................................................................................................... .............................................................................ggtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: NC_003098_spr1998_spr1999|Response regulator:Class III stress response-related ATPase, truncation|NEGATIVE:NEGATIVE|[1992320,1992960]|641 HSP 1 e-value: 1.0E-8 bit: 61.9 Len: 43 Query Start:2 Query End:44 Subject Strand: NEGATIVE Subject Start: 553 Subject End: 595 .actcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ .actcaatgaaaatcaaagagcaaactaggcagctagccgcagg........................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-8 bit: 60.0 Len: 30 Query Start:77 Query End:106 Subject Strand: NEGATIVE Subject Start: 161 Subject End: 190 ............................................................................tggtttgaagagattttcgaagagtataag.......................................................................................................................................................... ............................................................................tggtttgaagagattttcgaagagtataag.......................................................................................................................................................... Subject: NC_003098_spr1687_spr1688|ABC transporter substrate-binding protein - ferric iron transport:hypothetical protein|POSITIVE:NEGATIVE|[1659754,1659977]|224 HSP 1 e-value: 1.0E-8 bit: 61.9 Len: 43 Query Start:1 Query End:43 Subject Strand: POSITIVE Subject Start: 22 Subject End: 64 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcag......................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaaactagccgcag......................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-7 bit: 56.0 Len: 28 Query Start:78 Query End:105 Subject Strand: POSITIVE Subject Start: 109 Subject End: 136 .............................................................................ggtttgaagagattttcgaagagtataa........................................................................................................................................................... .............................................................................ggtttgaagagattttcgaagagtataa........................................................................................................................................................... Subject: NC_003028_SP_1516_SP_1517|acetyltransferase, GNAT family:transcription elongation factor GreA|NEGATIVE:NEGATIVE|[1424331,1424807]|477 HSP 1 e-value: 1.0E-8 bit: 61.9 Len: 47 Query Start:56 Query End:102 Subject Strand: POSITIVE Subject Start: 374 Subject End: 420 .......................................................tacgccaaggcgaagctggcatggtttgaagagattttcgaagagta.............................................................................................................................................................. .......................................................tacggcaaggcgacgctgacgtggtttgaagagattttcgaagagta.............................................................................................................................................................. HSP 2 e-value: 6.0E-7 bit: 56.0 Len: 44 Query Start:1 Query End:44 Subject Strand: POSITIVE Subject Start: 92 Subject End: 135 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ tactcaataaaaatcaaagagcaaactaggaaactagccgcagg........................................................................................................................................................................................................................ Subject: NC_003028_SP_0640_SP_0641|hypothetical protein:serine protease, subtilase family|POSITIVE:POSITIVE|[603164,603894]|731 HSP 1 e-value: 1.0E-8 bit: 61.9 Len: 31 Query Start:77 Query End:107 Subject Strand: NEGATIVE Subject Start: 308 Subject End: 338 ............................................................................tggtttgaagagattttcgaagagtataagt......................................................................................................................................................... ............................................................................tggtttgaagagattttcgaagagtataagt......................................................................................................................................................... HSP 2 e-value: 1.0E-8 bit: 61.9 Len: 43 Query Start:1 Query End:43 Subject Strand: NEGATIVE Subject Start: 464 Subject End: 506 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcag......................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaaactagccgcag......................................................................................................................................................................................................................... Subject: NC_003028_SP_0624_SP_0626|hypothetical protein:branched-chain amino acid transport system II carrier protein|POSITIVE:POSITIVE|[592218,592819]|602 HSP 1 e-value: 1.0E-8 bit: 61.9 Len: 43 Query Start:4 Query End:46 Subject Strand: POSITIVE Subject Start: 1 Subject End: 43 ...tcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... ...tcaatgaaaatcaaagagcaaactaggaagctagtcgtaggct...................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-8 bit: 60.0 Len: 42 Query Start:62 Query End:103 Subject Strand: POSITIVE Subject Start: 105 Subject End: 146 .............................................................aaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. .............................................................aaggcgacgctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_008533_SPD_1419_SPD_1422|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[1439453,1441070]|1618 HSP 1 e-value: 4.0E-8 bit: 60.0 Len: 46 Query Start:1 Query End:46 Subject Strand: POSITIVE Subject Start: 1507 Subject End: 1552 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagtgcaaactagaaagctagccgcaggct...................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-7 bit: 56.0 Len: 36 Query Start:67 Query End:102 Subject Strand: POSITIVE Subject Start: 1583 Subject End: 1618 ..................................................................gaagctggcatggtttgaagagattttcgaagagta.............................................................................................................................................................. ..................................................................gaagctgacgtggtttgaagagattttcgaagagta.............................................................................................................................................................. Subject: NC_008533_SPD_0569_SPD_0570|sodium/hydrogen exchanger family protein:ribonuclease BN, putative|POSITIVE:POSITIVE|[591916,592093]|178 HSP 1 e-value: 4.0E-8 bit: 60.0 Len: 42 Query Start:62 Query End:103 Subject Strand: NEGATIVE Subject Start: 4 Subject End: 45 .............................................................aaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. .............................................................aaggcgacgctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. HSP 2 e-value: 4.0E-8 bit: 60.0 Len: 42 Query Start:1 Query End:42 Subject Strand: NEGATIVE Subject Start: 111 Subject End: 152 tactcaatgaaaatcaaagagcaaactgggaagctaggcgca.......................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactagaaagctagccgca.......................................................................................................................................................................................................................... Subject: NC_008533_SPD_0366_SPD_0367|helicase, RecD/TraA family protein:signal peptidase I|NEGATIVE:NEGATIVE|[371171,371403]|233 HSP 1 e-value: 4.0E-8 bit: 60.0 Len: 46 Query Start:1 Query End:46 Subject Strand: NEGATIVE Subject Start: 115 Subject End: 160 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagaacaaactaggaagctagccgtaggct...................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 39 Query Start:67 Query End:105 Subject Strand: NEGATIVE Subject Start: 46 Subject End: 84 ..................................................................gaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... ..................................................................gaagctgacgtggtttgaagatattttcgaagagtataa........................................................................................................................................................... Subject: NC_008533_SPD_0173_SPD_0174|MccC family protein:membrnae protein, putative|NEGATIVE:NEGATIVE|[177190,177443]|254 HSP 1 e-value: 4.0E-8 bit: 60.0 Len: 34 Query Start:4 Query End:37 Subject Strand: NEGATIVE Subject Start: 161 Subject End: 194 ...tcaatgaaaatcaaagagcaaactgggaagctag............................................................................................................................................................................................................................... ...tcaatgaaaatcaaagagcaaactaggaagctag............................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 27 Query Start:77 Query End:103 Subject Strand: NEGATIVE Subject Start: 86 Subject End: 112 ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003098_spr0573_spr0574|Na+/H+ antiporter:hypothetical protein|POSITIVE:POSITIVE|[584385,584547]|163 HSP 1 e-value: 4.0E-8 bit: 60.0 Len: 42 Query Start:62 Query End:103 Subject Strand: NEGATIVE Subject Start: 4 Subject End: 45 .............................................................aaggcgaagctggcatggtttgaagagattttcgaagagtat............................................................................................................................................................. .............................................................aaggcgacgctgacgtggtttgaagagattttcgaagagtat............................................................................................................................................................. HSP 2 e-value: 4.0E-8 bit: 60.0 Len: 42 Query Start:1 Query End:42 Subject Strand: NEGATIVE Subject Start: 111 Subject End: 152 tactcaatgaaaatcaaagagcaaactgggaagctaggcgca.......................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactagaaagctagccgca.......................................................................................................................................................................................................................... Subject: NC_003098_spr0363_spr0364|Exonuclease V:Signal peptidase I|NEGATIVE:NEGATIVE|[363642,363874]|233 HSP 1 e-value: 4.0E-8 bit: 60.0 Len: 46 Query Start:1 Query End:46 Subject Strand: NEGATIVE Subject Start: 115 Subject End: 160 tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggct...................................................................................................................................................................................................................... tactcaatgaaaatcaaagaacaaactaggaagctagccgtaggct...................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 39 Query Start:67 Query End:105 Subject Strand: NEGATIVE Subject Start: 46 Subject End: 84 ..................................................................gaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... ..................................................................gaagctgacgtggtttgaagatattttcgaagagtataa........................................................................................................................................................... Subject: NC_003098_spr0168_spr0169|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[177190,177443]|254 HSP 1 e-value: 4.0E-8 bit: 60.0 Len: 34 Query Start:4 Query End:37 Subject Strand: NEGATIVE Subject Start: 161 Subject End: 194 ...tcaatgaaaatcaaagagcaaactgggaagctag............................................................................................................................................................................................................................... ...tcaatgaaaatcaaagagcaaactaggaagctag............................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 27 Query Start:77 Query End:103 Subject Strand: NEGATIVE Subject Start: 86 Subject End: 112 ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003028_SP_2193_SP_2194|DNA-binding response regulator:ATP-dependent Clp protease, ATP-binding subunit|NEGATIVE:NEGATIVE|[2114767,2115407]|641 HSP 1 e-value: 4.0E-8 bit: 60.0 Len: 30 Query Start:77 Query End:106 Subject Strand: NEGATIVE Subject Start: 161 Subject End: 190 ............................................................................tggtttgaagagattttcgaagagtataag.......................................................................................................................................................... ............................................................................tggtttgaagagattttcgaagagtataag.......................................................................................................................................................... HSP 2 e-value: 2.0E-7 bit: 58.0 Len: 41 Query Start:4 Query End:44 Subject Strand: NEGATIVE Subject Start: 232 Subject End: 272 ...tcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ ...tcaatgaaaatcaaagaacaaactaggaagctagccgcagg........................................................................................................................................................................................................................ HSP 3 e-value: 2.0E-7 bit: 58.0 Len: 41 Query Start:4 Query End:44 Subject Strand: NEGATIVE Subject Start: 553 Subject End: 593 ...tcaatgaaaatcaaagagcaaactgggaagctaggcgcagg........................................................................................................................................................................................................................ ...tcaatgaaaatcaaagagcaaactaggcagctagccgcagg........................................................................................................................................................................................................................ HSP 4 e-value: 2.0E-6 bit: 54.0 Len: 27 Query Start:77 Query End:103 Subject Strand: NEGATIVE Subject Start: 485 Subject End: 511 ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. ............................................................................tggtttgaagagattttcgaagagtat............................................................................................................................................................. Subject: NC_003028_SP_1706_SP_1707|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1611668,1611851]|184 HSP 1 e-value: 4.0E-8 bit: 60.0 Len: 42 Query Start:1 Query End:42 Subject Strand: POSITIVE Subject Start: 33 Subject End: 74 tactcaatgaaaatcaaagagcaaactgggaagctaggcgca.......................................................................................................................................................................................................................... tactcaatgaaaatcaaagagcaaactaggaaactagccgca.......................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-8 bit: 60.0 Len: 46 Query Start:60 Query End:105 Subject Strand: POSITIVE Subject Start: 138 Subject End: 183 ...........................................................ccaaggcgaagctggcatggtttgaagagattttcgaagagtataa........................................................................................................................................................... ...........................................................ccaaggcgacgttgacgtggtttgaagagattttcgaagagtataa........................................................................................................................................................... Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UACUCAAUGAAAAUCAAAGAGCAAACUGGGAAGCUAGGCGCAGGCUAUACUUGAGUACGCCAAGGCGAAGCUGGCAUGGUUUGAAGAGAUUUUCGAAGAGUAUAAGUACUUACUGACUUAAUAAAAAACAGAGGAGAGUGGUGGAUGCAUCGGAUGAAAUGAAAACGCAUACCAAUACCAUCUUACUCAUUAUCCCAUAUGGAUACGCUUAUUACAUAGGAGAAUACA (((((..((((((((......(((((((....(((((.(((.(((..(((....))).)))...)))...))))).)))))))....))))))))..)))))...(((.((.((....((((((......(((((((.((((((((((.(((.......)))....)))).))...)))))))).)))..(((((.....)))))...))))))....)).)).))). (-55.50) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UGUAUUCUCCUAUGUAAUAAGCGUAUCCAUAUGGGAUAAUGAGUAAGAUGGUAUUGGUAUGCGUUUUCAUUUCAUCCGAUGCAUCCACCACUCUCCUCUGUUUUUUAUUAAGUCAGUAAGUACUUAUACUCUUCGAAAAUCUCUUCAAACCAUGCCAGCUUCGCCUUGGCGUACUCAAGUAUAGCCUGCGCCUAGCUUCCCAGUUUGCUCUUUGAUUUUCAUUGAGUA .(((((..(..((.(((((((..(((((.....)))))..(((..(((((((...((.(((((((............))))))))))))).))).))).....))))))).))..)..)))))...(((((...(((((((....(((((......((((.(((...(((((((....)))).))).)))...)))).....)))))......)))))))...))))) (-52.90) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 825 70 21 222 173 smit:SMT_1810|5end_hypothetical_protein_1785219..1785449_POSITIVE 784 59 11 176 128 smit:SMT_1963|5end_ribonuclease_BN,_putative_1896462..1896692_NEGATIVE 784 59 11 163 115 smit:SMT_483|5end_transcriptional_activator_TipA,_putative_418827..419057_POSITIVE 756 68 21 186 139 smit:SMT_1602|5end_hypothetical_protein_1592385..1592615_POSITIVE 756 68 21 198 151 smit:SMT_1488|5end_K06147_ATP-binding_cassette,_subfamily_B,_bacterial_1467157..1467387_POSITIVE 756 68 21 211 164 smit:SMT_833|5end_hypothetical_protein_predicted_by_Glimmer/Critica_775362..775592_NEGATIVE 756 68 21 195 148 smit:SMT_130|5end_capsular_polysaccharide_biosynthesis_protein_80995..81225_POSITIVE 753 59 11 225 177 smit:SMT_1138|5end_hypothetical_protein_1079547..1079777_NEGATIVE 739 46 1 161 116 smit:SMT_366|5end_hypothetical_protein_302085..302315_POSITIVE 728 59 11 228 180 smit:SMT_1179|5end_aldose_1-epimerase_1137854..1138084_NEGATIVE 712 50 1 229 173 smit:SMT_1379|5end_thymidylate_kinase_1357438..1357668_NEGATIVE 707 59 11 174 126 smit:SMT_1782|5end_hypothetical_protein_1759520..1759750_POSITIVE 704 46 1 151 106 smit:SMT_1200|5end_K06148_ATP-binding_cassette,_subfamily_C,_bacterial_1163235..1163465_NEGATIVE 683 100 52 50 1 smit:SMT_2109|5end_hypothetical_protein_predicted_by_Glimmer/Critica_1999099..1999329_NEGATIVE 669 108 65 70 22 smit:SMT_149|5end_hypothetical_protein_predicted_by_Glimmer/Critica_98592..98822_POSITIVE 666 108 61 90 43 smit:SMT_958|5end_hypothetical_protein_predicted_by_Glimmer/Critica_905052..905282_POSITIVE 657 50 1 169 113 smit:SMT_163|5end_cardiolipin_synthetase_107309..107539_POSITIVE 639 45 3 231 189 smit:SMT_443|5end_hydroxyethylthiazole_kinase_382555..382785_POSITIVE 615 44 1 191 149 smit:SMT_150|5end_K02030_polar_amino_acid_transport_system_substrate-binding_protein_98787..99017_POSITIVE 565 100 56 217 173 smit:SMT_677|5end_DNA_topoisomerase_I_587318..587548_NEGATIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 825 70 21 57 8 smit:SMT_1809|3end_MutT/NUDIX_family_protein_1785134..1785284_POSITIVE 801 59 14 46 1 smit:SMT_890|3end_K02029_polar_amino_acid_transport_system_permease_protein_837692..837842_POSITIVE 769 70 21 57 8 smit:SMT_2109|3end_hypothetical_protein_predicted_by_Glimmer/Critica_1999061..1999211_NEGATIVE 769 70 21 57 8 smit:SMT_1180|3end_putative_tagatose-6-phosphate_aldose/ketose_isomerase_1138036..1138186_NEGATIVE 763 68 21 55 8 smit:SMT_1140|3end_glycogen_phosphorylase_1081316..1081466_NEGATIVE 756 68 21 56 9 smit:SMT_834|3end_hypothetical_protein_775517..775667_NEGATIVE 752 68 21 51 4 smit:SMT_1964|3end_sodium/hydrogen_exchanger_family_protein_1896596..1896746_NEGATIVE 744 70 21 55 6 smit:SMT_799|3end_hypothetical_protein_707296..707446_NEGATIVE 737 59 13 47 1 smit:SMT_1477|3end_K02077_zinc/manganese_transport_system_substrate-binding_protein_1459447..1459597_NEGATIVE 709 68 21 48 1 smit:SMT_1766|3end_sucrose-6-phosphate_hydrolase_1743101..1743251_POSITIVE 708 100 51 83 34 smit:SMT_1536|3end_trigger_factor_1520636..1520786_NEGATIVE 708 100 51 88 39 smit:SMT_915|3end_sucrose_operon_repressor_868619..868769_POSITIVE 704 68 21 55 6 smit:SMT_698|3end_uracil_permease_609769..609919_POSITIVE 692 103 61 47 5 smit:SMT_1872|3end_K03217_preprotein_translocase_YidC_subunit_1830883..1831033_NEGATIVE 690 107 62 90 44 smit:SMT_124|3end_hypothetical_protein_75590..75740_NEGATIVE 651 100 56 88 43 smit:SMT_913|3end_putative_sucrose-specific_PTS_permease,_enzyme_II_863923..864073_NEGATIVE 615 44 1 109 67 smit:SMT_149|3end_hypothetical_protein_predicted_by_Glimmer/Critica_98785..98935_POSITIVE 611 100 51 52 2 smit:SMT_442|3end_transcriptional_regulator,_putative_382400..382550_POSITIVE 603 100 51 65 15 smit:SMT_1671|3end_hypothetical_protein_1659392..1659542_NEGATIVE 587 103 62 65 24 smit:SMT_1815|3end_K02035_peptide/nickel_transport_system_substrate-binding_protein_1788899..1789049_NEGATIVE