Origin IGS: ttcctctttacgtccgtcttctaactctttgattaactctggagtccattttggtcctgttggattatttggatcgattggttgatctttagttggagttgggtcgtttggatttacagtaattggcttagcagttactaggactttgtatacttggttagtcttagaatctgcatcgaatgtaccatctgttgggtagttgttttctacaactgtataacctttagcttttagtgcttcaattgttgctgttacatctgcagctttagtgaatgcttttcctgtatcaccagtatctactactgattctgcaactgcacctttttcagtcttatccgtttcactgtttacttcgatgaagtgaacaatcgctacttgtgatccatctttaacataggtaattgtagtgttctctgttggatctgttggtaagtctggtacttcatatcctttgcttggatcgttaggatctttcggtgttaatggttttccatttggtcctaccggtgttgttccaggaatgtatggaactactggagtttcagtaggtgtccctggttttgtaggatctgctggagttgcatttggatatggttttggatttaggtcagccgtcaggaacgtctttgatgannnnnttaattaattaannnnnttttgatttctcctttaggtatttatattcgattcaatctactgattttcatcaaccatactaggataacacattttttttgtaaagtaaagttacttgacaaaaaaagatgaaaaaattctcctgtcagacctagcagacaggagaaggtgttaaatatcaatctcaaatggttcgtcaatggtttctgatacgtattttccgtctttcttctgttgtttgacacattctgtaaggagatattcgatttgcccattgactgaacgaaagtcatcttctgcccatgatgcgagtgcagcgtataactttgttgagagtcgaagggggatctgctttttttagcttcaaccatct .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 agatggttgaagctaaaaaaagcagatcccccttcgactctcaacaaagttatacgctgcactcgcatcatgggcagaagatgactttcgttcagtcaatgggcaaatcgaatatctccttacagaatgtgtcaaacaacagaagaaagacggaaaatacgtatcagaaaccattgacgaaccatttgagattgatatttaacaccttctcctgtctgctaggtctgacaggagaattttttcatctttttttgtcaagtaactttactttacaaaaaaaatgtgttatcctagtatggttgatgaaaatcagtagattgaatcgaatataaatacctaaaggagaaatcaaaannnnnttaattaattaannnnntcatcaaagacgttcctgacggctgacctaaatccaaaaccatatccaaatgcaactccagcagatcctacaaaaccagggacacctactgaaactccagtagttccatacattcctggaacaacaccggtaggaccaaatggaaaaccattaacaccgaaagatcctaacgatccaagcaaaggatatgaagtaccagacttaccaacagatccaacagagaacactacaattacctatgttaaagatggatcacaagtagcgattgttcacttcatcgaagtaaacagtgaaacggataagactgaaaaaggtgcagttgcagaatcagtagtagatactggtgatacaggaaaagcattcactaaagctgcagatgtaacagcaacaattgaagcactaaaagctaaaggttatacagttgtagaaaacaactacccaacagatggtacattcgatgcagattctaagactaaccaagtatacaaagtcctagtaactgctaagccaattactgtaaatccaaacgacccaactccaactaaagatcaaccaatcgatccaaataatccaacaggaccaaaatggactccagagttaatcaaagagttagaagacggacgtaaagaggaa Mask Tandem Repeat Region ================================================ ttcctctttacgtccgtcttctaactctttgattaactctggagtccattttggtcctgttggattatttggatcgattggttgatctttagttggagttgggtcgtttggatttacagtaattggcttagcagttactaggactttgtatacttggttagtcttagaatctgcatcgaatgtaccatctgttgggtagttgttttctacaactgtataacctttagcttttagtgcttcaattgttgctgttacatctgcagctttagtgaatgcttttcctgtatcaccagtatctactactgattctgcaactgcacctttttcagtcttatccgtttcactgtttacttcgatgaagtgaacaatcgctacttgtgatccatctttaacataggtaattgtagtgttctctgttggatctgttggtaagtctggtacttcatatcctttgcttggatcgttaggatctttcggtgttaatggttttccatttggtcctaccggtgttgttccaggaatgtatggaactactggagtttcagtaggtgtccctggttttgtaggatctgctggagttgcatttggatatggttttggatttaggtcagccgtcaggaacgtctttgatgannnnnttaattaattaannnnnttttgatttctcctttaggtatttatattcgattcaatctactgattttcatcaaccatactaggataacacattttttttgtaaagtaaagttacttgacaaaaaaagatgaaaaaattctcctgtcagacctagcagacaggagaaggtgttaaatatcaatctcaaatggttcgtcaatggtttctgatacgtattttccgtctttcttctgttgtttgacacattctgtaaggagatattcgatttgcccattgactgaacgaaagtcatcttctgcccatgatgcgagtgcagcgtataactttgttgagagtcgaagggggatctgctttttttagcttcaaccatct Find is-nt database================================================ Query_seq: SMT_1561:SMT_1562|SMT_1561:SMT_1562:putative mucus binding protein:hypothetical protein:<-<-:1553900..1554908 1009 ttcctctttacgtccgtcttctaactctttgattaactctggagtccattttggtcctgttggattatttggatcgattggttgatctttagttggagttgggtcgtttggatttacagtaattggcttagcagttactaggactttgtatacttggttagtcttagaatctgcatcgaatgtaccatctgttgggtagttgttttctacaactgtataacctttagcttttagtgcttcaattgttgctgttacatctgcagctttagtgaatgcttttcctgtatcaccagtatctactactgattctgcaactgcacctttttcagtcttatccgtttcactgtttacttcgatgaagtgaacaatcgctacttgtgatccatctttaacataggtaattgtagtgttctctgttggatctgttggtaagtctggtacttcatatcctttgcttggatcgttaggatctttcggtgttaatggttttccatttggtcctaccggtgttgttccaggaatgtatggaactactggagtttcagtaggtgtccctggttttgtaggatctgctggagttgcatttggatatggttttggatttaggtcagccgtcaggaacgtctttgatgannnnnttaattaattaannnnnttttgatttctcctttaggtatttatattcgattcaatctactgattttcatcaaccatactaggataacacattttttttgtaaagtaaagttacttgacaaaaaaagatgaaaaaattctcctgtcagacctagcagacaggagaaggtgttaaatatcaatctcaaatggttcgtcaatggtttctgatacgtattttccgtctttcttctgttgtttgacacattctgtaaggagatattcgatttgcccattgactgaacgaaagtcatcttctgcccatgatgcgagtgcagcgtataactttgttgagagtcgaagggggatctgctttttttagcttcaaccatct Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: SMT_1561:SMT_1562|SMT_1561:SMT_1562:putative mucus binding protein:hypothetical protein:<-<-:1553900..1554908 1009 ttcctctttacgtccgtcttctaactctttgattaactctggagtccattttggtcctgttggattatttggatcgattggttgatctttagttggagttgggtcgtttggatttacagtaattggcttagcagttactaggactttgtatacttggttagtcttagaatctgcatcgaatgtaccatctgttgggtagttgttttctacaactgtataacctttagcttttagtgcttcaattgttgctgttacatctgcagctttagtgaatgcttttcctgtatcaccagtatctactactgattctgcaactgcacctttttcagtcttatccgtttcactgtttacttcgatgaagtgaacaatcgctacttgtgatccatctttaacataggtaattgtagtgttctctgttggatctgttggtaagtctggtacttcatatcctttgcttggatcgttaggatctttcggtgttaatggttttccatttggtcctaccggtgttgttccaggaatgtatggaactactggagtttcagtaggtgtccctggttttgtaggatctgctggagttgcatttggatatggttttggatttaggtcagccgtcaggaacgtctttgatgannnnnttaattaattaannnnnttttgatttctcctttaggtatttatattcgattcaatctactgattttcatcaaccatactaggataacacattttttttgtaaagtaaagttacttgacaaaaaaagatgaaaaaattctcctgtcagacctagcagacaggagaaggtgttaaatatcaatctcaaatggttcgtcaatggtttctgatacgtattttccgtctttcttctgttgtttgacacattctgtaaggagatattcgatttgcccattgactgaacgaaagtcatcttctgcccatgatgcgagtgcagcgtataactttgttgagagtcgaagggggatctgctttttttagcttcaaccatct Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: SMT_1561:SMT_1562|SMT_1561:SMT_1562:putative mucus binding protein:hypothetical protein:<-<-:1553900..1554908 1009 ttcctctttacgtccgtcttctaactctttgattaactctggagtccattttggtcctgttggattatttggatcgattggttgatctttagttggagttgggtcgtttggatttacagtaattggcttagcagttactaggactttgtatacttggttagtcttagaatctgcatcgaatgtaccatctgttgggtagttgttttctacaactgtataacctttagcttttagtgcttcaattgttgctgttacatctgcagctttagtgaatgcttttcctgtatcaccagtatctactactgattctgcaactgcacctttttcagtcttatccgtttcactgtttacttcgatgaagtgaacaatcgctacttgtgatccatctttaacataggtaattgtagtgttctctgttggatctgttggtaagtctggtacttcatatcctttgcttggatcgttaggatctttcggtgttaatggttttccatttggtcctaccggtgttgttccaggaatgtatggaactactggagtttcagtaggtgtccctggttttgtaggatctgctggagttgcatttggatatggttttggatttaggtcagccgtcaggaacgtctttgatgannnnnttaattaattaannnnnttttgatttctcctttaggtatttatattcgattcaatctactgattttcatcaaccatactaggataacacattttttttgtaaagtaaagttacttgacaaaaaaagatgaaaaaattctcctgtcagacctagcagacaggagaaggtgttaaatatcaatctcaaatggttcgtcaatggtttctgatacgtattttccgtctttcttctgttgtttgacacattctgtaaggagatattcgatttgcccattgactgaacgaaagtcatcttctgcccatgatgcgagtgcagcgtataactttgttgagagtcgaagggggatctgctttttttagcttcaaccatct Intra-Species Hit: Count: 0 Inter-species Hit: Count: 23 Min: 10 Max: 993 Len: 984 Subject: UniRef90_Q03LS6 Cluster: Possible cell surface protein; n=1; Streptococcus thermophilus LMD-9|Rep: Possible cell surface protein - Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) HSP 1 e-value: 1.0E-27 bit: 126.0 Len: 582 Query Start:10 Query End:591 Subject Strand: null Subject Start: 553 Subject End: 745 ......... Y P N A T P A D P T K P G T P T E T - - P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T - - D G T F D A D S K T N Q V Y K V L V T A - - - - - K P I T V - N P N D P T - P T K D Q P I D P N N P T G P K W T P E L I K E L E D G R .................................................................................................................................................................................................................................................................................................................................................................................................................................. ......... Y P N - D P S D P T K I A D S S V P G Y P V I D F L P G Y T P K D H M G T P L V P V D P D D H T K G Y - I P P T P E N P T E D T V I T Y E K D S Q K A T V T Y V V E G T - - - - - - - - G T V L H T D N L E G K S G E P I D Y S T - - V A K L A E L K A L G Y D L V T D G F T T A T D K N F D K D T K V D Q S F V V T V K P H V E P I K P V D P E N P N D P N K P K P G D P I D P N N P D G P K W T E D L I K Q I D T T R .................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-16 bit: 89.4 Len: 216 Query Start:391 Query End:606 Subject Strand: null Subject Start: 857 Subject End: 924 ...................................................................................................................................................................................................................................................................................................................................................................................................... L N P K P Y P N A T P A D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V ................................................................................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................................................................................................................................................................................... L D K P Q Y P N - D P T D P T K P G T P T T - - V I P Q V P G T T P K D S N G N P L K P V D P N D P S K G Y - V P P T P E N P T E D T V I N Y V ................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q97NB8 Cluster: Conserved domain protein; n=2; Streptococcus pneumoniae|Rep: Conserved domain protein - Streptococcus pneumoniae HSP 1 e-value: 9.0E-27 bit: 123.0 Len: 183 Query Start:811 Query End:993 Subject Strand: null Subject Start: 6 Subject End: 66 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... K K Q I P L R L S T K L Y A A L A S W A E D D F R S V N G Q I E Y L L T E C V K Q Q K K D G K Y V S E T I D E P F E I D I ................ .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... K K Q I P L R L S T K L Y A A L A S W A E D D F R S V N G Q I E Y L L T E C V K Q R K K D G K Y V S E T I D E P F E I D I ................ Subject: UniRef90_Q5FKA5 Cluster: Putative mucus binding protein; n=1; Lactobacillus acidophilus|Rep: Putative mucus binding protein - Lactobacillus acidophilus HSP 1 e-value: 9.0E-19 bit: 97.1 Len: 573 Query Start:46 Query End:618 Subject Strand: null Subject Start: 2098 Subject End: 2268 ............................................. L T A D L N P K P Y P N A T - - - - P A D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D - T G K A F T K A A - D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W ....................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. I P V D P N G N P I P N V P T P Q Y P T D P T D P T K V T P D E P V P T I P G Y T P S T P T - - - - - - V T P T D P G K D T P V P Y N P V V P A K D - - - - - - - - - - Q K A V V N Y V D A D E D N - - - - - - - - - K L I T S S G D L T G K A G K K I D Y S T S S T I E D L I N K G Y V L V N D G F P K D A T Y D N D D N T T Q T Y T V V F K H G T V P V T P T N P - G K P G E P I N P N D P D G P K W ....................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-18 bit: 96.7 Len: 573 Query Start:46 Query End:618 Subject Strand: null Subject Start: 1265 Subject End: 1435 ............................................. L T A D L N P K P Y P N A T - - - - P A D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D - T G K A F T K A - A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W ....................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. I P V D P S G N P I P D A P T P Q Y P T D P T D P S K V T P N E P V P N V P G Y T P S V P T V T P I - - - - - - D P G K D T P V P Y T P E T P A K D - - - - - - - - - - Q K A V V N Y V D A D E D N - - - - - - - - - K L I T S S G D L T G K A G T K I D Y S T N S T I E D L T N K G Y V L V N D G F P K D A T Y D N D D N T T Q T Y T V V L R H G T Q P V N P T N P - G K P G E P I N P N D P D G P K Y ....................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 5.0E-18 bit: 94.7 Len: 573 Query Start:46 Query End:618 Subject Strand: null Subject Start: 1823 Subject End: 1993 ............................................. L T A D L N P K P Y P N A T - - - - P A D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D - T G K A F T K A A D V T A - T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W ....................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. I P V D P N G N P I P N V P T P Q Y P T D P T D P T K V T P D E P V P N I P G L T P S V P T - - - - - - V T P T D P G K D T P V P Y N P V V P A K D - - - - - - - - - - Q A A V V N Y V D A D E D N - - - - - - - - - K L I T S S G D L T G K A G E T I N Y S T A D T I K D L E N K G Y V L V N D G F P A G A K Y D S D D N T T Q I Y T V V L K H G T T T I T P D K P - G K P G E P I N P N D P D G P K W ....................................................................................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 5.0E-15 bit: 84.7 Len: 573 Query Start:46 Query End:618 Subject Strand: null Subject Start: 1545 Subject End: 1717 ............................................. L T A D L N P K P Y P N A T - - - - P A D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D - T G K A F T K A A - D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W ....................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. I P V D P N G H P I P N V P Q P Q Y P T D P N N P A K V T P D E P V P N I P G M T P S V P T - - - - - - V T P T D P G K D T P V P Y T P V A P A K D - - - - - - - - - - Q V A Q V I Y R D V N D P N K V T Q - - - - - - - L A T S G D L T G K A G S E I D Y N A Q S E I D N L I N K G Y V L K N N G F P A G A V F D N D D N K T Q T F Y I D F V H G T V P V T P T D P - G K P G E P I N P N D P D G P K W ....................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q74LY6 Cluster: Hypothetical protein; n=1; Lactobacillus johnsonii|Rep: Hypothetical protein - Lactobacillus johnsonii HSP 1 e-value: 2.0E-18 bit: 95.9 Len: 573 Query Start:46 Query End:618 Subject Strand: null Subject Start: 1470 Subject End: 1640 ............................................. L T A D L N P K P Y P N A - T P A D P T K P G T P T E T - - - P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D - - T G K A F T K A A D V T A - T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W ....................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. I P V D P N G D P I P N V P T P T Y P T D P T D P T K V V P D E P V P E I P G L I P S V P T - - - - - - V T P E N P G K D T P V P Y T P E V P A K D - - - - - - - - - - Q V A V V N Y I D A D D N N - - - - - - - - - - A I I T S S D N L T G K A G E K I D Y S T A S T I E E L E N K G Y V L V S D G F P A G A T F D N D D N T T Q I Y T V V L K H G T V P V T P E N P - G K P G E P I N P N D P D G P K W ....................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 3.0E-18 bit: 95.5 Len: 573 Query Start:46 Query End:618 Subject Strand: null Subject Start: 1195 Subject End: 1365 ............................................. L T A D L N P K P Y P N A - T P A D P T K P G T P T E T - - - P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D - T G K A F T K A A D V T A - T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W ....................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. I P V D P N G D P I P N V P T P T Y P T D P T D P T K V V P D E P V P E I P G L I P S V P T - - - - - - V T P E N P G K D T P V P Y T P E V P A K D - - - - - - - - - - Q V A V V N Y I - - - - - - D A D D N N A I - - - I T S S G N L T G K A G E K I D Y S T A S T I E E L E N K G Y V L V S D G F P A G A T F D N D D N T T Q I Y T V V L K H G T V P V T P E N P - G K P G E P I N P N D P D G P K W ....................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 2.0E-9 bit: 66.2 Len: 486 Query Start:73 Query End:558 Subject Strand: null Subject Start: 1882 Subject End: 2069 ........................................................................ P G T P T E T P V V P Y - - I P G T T P V G P N G K P L - - - - T P K - - - D P N D P S K G Y - - - - - - - - - - E V P D - - - - L P T D P T E N T T I T Y V K D - - - - - - G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T - - - F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D ................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ........................................................................ P D K P L A E V T V V Y H K I G K I V P V D P N G N P I P N V P T P S Y T N D P T D P T K V V P N E P V P A I P G K T P D K T T V T P V D P T K D T P V V Y K D D K V P P A P N T Q K A V V N F I D V N T G K - - - - - - I I S T S G I L S G R P G E D I N K L F S S A E V I K Q L E A A G Y E V V Y N A F D G D G V T K Y F D N D G N T V Q Q F T I A L K L K E K A K T P D P V L P D P E V P V E ................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q1UB69 Cluster: Hypothetical protein precursor; n=1; Lactobacillus reuteri 100-23|Rep: Hypothetical protein precursor - Lactobacillus reuteri 100-23 HSP 1 e-value: 6.0E-18 bit: 94.4 Len: 549 Query Start:46 Query End:594 Subject Strand: null Subject Start: 1362 Subject End: 1571 ............................................. P Y P N A T P A D P T K P G T P T E T - - - - - P V V P Y I P G - - T T P V G P N G K P L T - - - - - - - P K D P N D P S K - - - - - - - - - - - G Y - - E V P D L - P T D P T E N T T I T Y V K D G - - - - - - - S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D - T G K A F T K A A D V T A T - I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W ............................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. P V V N G Y H A D R A Q V D G P S V T M E D Q E A T V T Y V P N G K I I P V D P N G N P I P D V P T P Q Y P T D P T D P T K V T P D E P V P T I P G Y K P E V P T V T P T D P G V D T P V K Y T P D T V N P K P A V D Q I A I V N Y V D Q D N N N A Q - - - - - - - - - I A T S G D L T G K A G D K I N Y S T A D Q I K Q L E A Q G Y V L V T D G F P A G A T F D D N A D Q N Q V F T V V L K H G H A P V G P N N P - H E P D T P V N P N D P N G P K W ............................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-15 bit: 84.3 Len: 603 Query Start:16 Query End:618 Subject Strand: null Subject Start: 1128 Subject End: 1306 ............... L T A D L N P K P Y P N A T - - - - P A D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W T P E L I K E L E D ....................................................................................................................................................................................................................................................................................................................................................................................................... ............... I P V D P S G K P I P N V P T P S Y P N D P T D P T K V T P D E P V P N V P G Y T P S V P T - - - V T P T D P - - - - - G K D T P - V P Y T P I V N - - - - - - - - - D Q T A V V N Y V D Q D N - - - - - N N A Q I A T S G N L T G K P G S V I N Y S - - T A D Q I K Q L E A Q G Y V L V S D G F P A G A V F D N D D N T T Q T Y T V V L K H G T T T F K P D K P - G T P G E P I N P N Y P D G P K V T N E D V E Y L K N ....................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 6.0E-7 bit: 57.8 Len: 519 Query Start:100 Query End:618 Subject Strand: null Subject Start: 749 Subject End: 903 ................................................................................................... L T A D L N P K P Y P N A T - - - - P A D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P ....................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................... I P V D P S G K P I P N V P T P Q Y P T D P T D P T A V T P D E P V P D I P G W V P S Q P T - - - - - - V T P T D P G K D T P V T Y N Q I Q K A D L T I V D Q D N D N Q Q I - I V E G I T T K F N A D G I E - - - - - - - - - - - - N T K I G F T G Y G D - - - S I N A L E S L G Y E Y V S S D F N V D Q T F D N D G N N D Q H F V I V M K H G T E P V N P E H P ....................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q047B2 Cluster: Adhesion exoprotein; n=1; Lactobacillus gasseri ATCC 33323|Rep: Adhesion exoprotein - Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) HSP 1 e-value: 3.0E-17 bit: 92.0 Len: 558 Query Start:46 Query End:603 Subject Strand: null Subject Start: 3022 Subject End: 3185 ............................................. N P K P - Y P N A T - P A D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V - N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T - A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W ...................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. N P I P N V P N P T Y P T D P T D P T K V V P D E P V P N I P G M T P S T P T - - - - - - V T P E D P G K D T P V P Y N P V V P A K D - - - - - - - - - - Q A A V V N Y V D A D N N N T I I T S S G N L - - - - - - - - - T G K A G S R I D Y S T K T T I A D L E N K G Y V L V N D G F P A D A T F D N D D S T T Q V F T V V L K H G T V P V T P E N P - G K P G E P I N S N D P D G P K W ...................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-9 bit: 67.0 Len: 570 Query Start:25 Query End:594 Subject Strand: null Subject Start: 2015 Subject End: 2184 ........................ P Y P N A - T P A D P T K P G T P T E T - - - P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I - V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N - Q V Y K V L V T - - A K P I T - V N P N D P T P T K D Q P I D P N N P T G P - K W T P E L I K E ............................................................................................................................................................................................................................................................................................................................................................................................................................... ........................ P I P D A P T P S Y P N D P T D P T K V I P N E P V P D V P G Y T P V D P T - - P I T P E - - - - - - - - - - - - - - - - D P T K D T P V P Y T K D P V K A G L T V Q Y I D Q D N N N S V I K S D A V D G N I G D K I D Y S T A - - - - - - - - S S I T D F E N K G Y I L V T D G F T G Q A G D E F T T E N N G Q V Y K V V F K H G T R P V T P E N P A D P - - - - N E P V D P D H P D T P T P S N P N L S K E ............................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 1.0E-9 bit: 67.0 Len: 597 Query Start:37 Query End:633 Subject Strand: null Subject Start: 3399 Subject End: 3628 .................................... S S K T F L T A D L N P K P Y P N A T P A D P T K P G T P T E T P V V P Y I P G T T - - - - - - - - - P V G P N G K P L - - - - T P K - - - D P N D P S K G Y - - - - - - - - - - E V P D - - - - L P T D P T E N T T I T Y V K D - - - - - - G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T - - - F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I - D P N N P T G P K W T P E ........................................................................................................................................................................................................................................................................................................................................................................................ .................................... S S H T F T L V D V - - - P V I P G Y V A E V K S A G G K T V T P D T P L A E V T V V Y H K V G K I V P V D P N G N P I P N V P T P S Y T N D P T D P T K V V P N E P V P A I T G K T P D K T S V T P V D P T K D T P V V Y K N N E V P A T P N S Q K A V V N F I D V N T G K - - - - - - L I K T S G I L S G R P G E D I N K L Y S S A E V I K Q L E E A G Y E V V Y N A F D G D G V T K Y F D D D D N T T Q Q F T V A L K L K E K A K T P Y P V V P A P E T P A K E P E A P A E K V S R P E ........................................................................................................................................................................................................................................................................................................................................................................................ HSP 4 e-value: 3.0E-9 bit: 65.5 Len: 552 Query Start:67 Query End:618 Subject Strand: null Subject Start: 2751 Subject End: 2912 .................................................................. L T A D L N P K P Y P N A - T P A D P T K P G T P T E T - - - P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D - T G K A F T K A A D V T A T - I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N ....................................................................................................................................................................................................................................................................................................................................................................................................... .................................................................. I P T D P S G N P I P N V P T P T Y P T D P T D P T K V V P D E P V P D I P G M T P S T P T - - - - - - V T P E D P G K D T P V P Y N P V V P A K N - - - - - - - - - - Q V A Q V I Y R D V Q D G A N K - - - - - - - - Q L A T S G D L T G K S G S E I S Y S T A D Q I K K L I N Q G Y V L K N D G F P A G A V F D N D D S K N Q V F Y V D F I H G Q A P V N P D N P - - - - H E G I D P S ....................................................................................................................................................................................................................................................................................................................................................................................................... HSP 5 e-value: 3.0E-6 bit: 55.5 Len: 546 Query Start:58 Query End:603 Subject Strand: null Subject Start: 3297 Subject End: 3471 ......................................................... N P K P - Y P N A T - P A D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E - - - - - - - V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T ...................................................................................................................................................................................................................................................................................................................................................................................................................... ......................................................... N P I P N V P N P T Y P T D P T D P T K V V P D Q P V P E V P G M T P S T P T - - - V T P E D P - - - - - G K D T P - V P Y N P V K N P D K V T T V E G K Q - - I V H F V D G D N G N T P L R D P N T Q T H E F K I T N G V P D E S S H T F T L V D V P V I P G Y V A E V K S A G G K T V T P D T P L A E V T V V Y H K V G K I V P V D P N G N P I - - - P N V P T P S Y T N - - D P T D P T ...................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q1U9P0 Cluster: YD repeat protein precursor; n=1; Lactobacillus reuteri 100-23|Rep: YD repeat protein precursor - Lactobacillus reuteri 100-23 HSP 1 e-value: 3.0E-16 bit: 89.0 Len: 549 Query Start:46 Query End:594 Subject Strand: null Subject Start: 3985 Subject End: 4194 ............................................. P Y P N A T P A D P T K P G T P T E T - - - - - P V V P Y I P G - - T T P V G P N G K P L T - - - - - - - P K D P N D P S K - - - - - - - - - - - G Y - - E V P D L - P T D P T E N T T I T Y V K D G - - - - - - - S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D - T G K A F T K A A D V T A T - I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W ............................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. P V V N G Y H A D R A Q V E G P S V T M E D Q E T T V T Y V P N G K I I P V D P N G N P I P D V P T P Q Y P T D P T D P T K V T P D E P V P T I P G Y K P E V P T V T P T D P G V D T P V K Y T P D T V N P K P A V D Q I A I V N Y V D Q D N N N V Q - - - - - - - - - I A T S G D L T G K A G D K I N Y S T A N Q I K Q L E A Q G Y V L V T D G F P A G A T F D D N A D Q N Q V F T V V L K H G H A P V G P N N P - H E P G T P V N P D E P N G P K W ............................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 8.0E-15 bit: 84.0 Len: 603 Query Start:16 Query End:618 Subject Strand: null Subject Start: 3751 Subject End: 3929 ............... L T A D L N P K P Y P N A T - - - - P A D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W T P E L I K E L E D ....................................................................................................................................................................................................................................................................................................................................................................................................... ............... I P V D P S G K P I P N V P T P Q Y P T D P T D P A K V T P N E P V P N V P G Y T P S V P T - - - V T P T D P - - - - - G K D T P - V P Y N P I V N - - - - - - - - - D Q T A V V N Y V D Q D N - - - - - N N A Q I A T S G N L T G K P G S V I N Y S - - T A D Q I K Q L E D Q G Y V L V S D G F P A G A V F D N D D N T T Q T Y T V V L K H G T T T F K P D K P - G T P G E P I N P N Y P D G P K V T N E D V D Y L K N ....................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 4.0E-13 bit: 78.2 Len: 573 Query Start:46 Query End:618 Subject Strand: null Subject Start: 3195 Subject End: 3362 ............................................. L T A D L N P K P Y P N A T - - - - P A D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L - P T D P T E N T T I T Y V K - D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T - - A K P I T - V N P N D P T P T K D Q P I D P N N P T G P K W ....................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. I P V D P T G N P I P N V P T P S Y P N D P T D P T K V T P D E P V P T I P G Y T P - - - - - - - - - - - - - - - - - - - - E V P T V T P G V P T E D T P V V Y H P V D N T Q N A Q V R Y I D L T N N E E L A N S G N L S G Q P G D - - - - - K I N Y S T A D - - - E I K S L E D K G Y V L V N D G F P T D A A F D N D K D H D Q V F T V T F R H G T Q P V T P T N P G K P - - - - G E P I N P N D P D G P K Y ....................................................................................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 1.0E-12 bit: 76.6 Len: 573 Query Start:46 Query End:618 Subject Strand: null Subject Start: 3472 Subject End: 3640 ............................................. L T A D L N P K P Y P N A - T P A D P T K P G T P - - - T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W ....................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. I P V D P T G N P I P N V P T P Q Y P T D P T D P A K V T P N E P V P N V P G Y T P S V P T - - - V T P T D P - - - - - G K D T P - V P Y N P I V N - - - - - - - - - D Q T A V V N Y V D Q D N - - - - - N N A Q I A T S G N L T G K P G S V I N Y S - - T A D Q I K Q L E D Q G Y V L V S D G F P A G A T F D D D D N T T Q T Y T V V L K H G Q Q P V T P T N P - G K P G E P I N P N D P D G P K Y ....................................................................................................................................................................................................................................................................................................................................................................................................... HSP 5 e-value: 4.0E-8 bit: 61.6 Len: 504 Query Start:94 Query End:597 Subject Strand: null Subject Start: 1651 Subject End: 1812 ............................................................................................. K P Y P N A T P A D P T K - - - P G T P T E - - - - - - T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K - - - - P I T V N P N D P T P ............................................................................................................................................................................................................................................................................................................................................................................................................................ ............................................................................................. K P V G N V V P V D P N G N P I P G V P S T P F P N D P T D P T K T T P G T K P T V P G Y H P E T G K - P G D P - - - - - V D P V P G N P G E D V K V P Y V K D Q G A V Q V I Y H - - - - - - - D D T T N T T I P G V G Y N S G D L D A G T K V E Y T T T T T I A D L E K Q G Y V Y V S - - - - T D G T I P A E I P A N D S I T V T V H M K H G V Q P V T - - P D T P T P ............................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 6 e-value: 1.0E-7 bit: 60.5 Len: 573 Query Start:22 Query End:594 Subject Strand: null Subject Start: 2186 Subject End: 2357 ..................... P Y P N A T P A D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E - N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T - - A K P I T - V N P N D P - T P T K D Q P I D P N N P T G P K W T P E L I K E L ............................................................................................................................................................................................................................................................................................................................................................................................................................... ..................... P T P N Y - P N D P T N P T D V K P N E P V P N V P G Y R P T V P T - - - V T P D K P T E - - - - - D T P V I Y N Q V Q K A D L T I V D Q D N N N Q Q I I V D G V T T K F N A D - - - - G I K D E N I V F T G - - - - - - T E A A Q A - - - - - A L E A R G Y E F V S S N F T S G T K F D D D A N T D Q H F V I V M K H G Q Q P V T P T N P G K P G E P I N P N D P D P N G P K Y P Q G S D Q V T K D I ............................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q7X0P4 Cluster: Mlp; n=1; Lactobacillus fermentum|Rep: Mlp - Lactobacillus fermentum HSP 1 e-value: 1.0E-15 bit: 87.0 Len: 573 Query Start:46 Query End:618 Subject Strand: null Subject Start: 3451 Subject End: 3618 ............................................. L T A D L N P K P Y P N A T - - - - P A D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G - K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W ....................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. I P V D P T G K P I P N V P T P E Y P N D P T D P T K V T P N E P V P T I P G Y T P E T P T - - - - - - V T P E V P T K D T P V K Y T P V D N T Q N A Q V R Y I - - - - - - - - - - - - - - - - - - D L T N N E E I A N S G N L S G Q P G D K I N Y S T A D - - - T I K S L T D K G Y V L V N D G F P A D A A F D N D K G H D Q V F T V T F R H G T Q P V N P N E P - G K P G Q P I N P N D P E G P K Y ....................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-14 bit: 83.2 Len: 594 Query Start:16 Query End:609 Subject Strand: null Subject Start: 3731 Subject End: 3906 ............... D L N P K P Y P N A T - - - - P A D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L - P T D P T E N T T I T Y V K D - G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W T P E L I K E L E D ................................................................................................................................................................................................................................................................................................................................................................................................................ ............... D P T G K P I P N V P T P Q Y P T D P E N P A K V T P D E P V P S I P G F V P - - - - - - - - - - - - - - - - - - - - E V P T V T P T D P G K D T P V H Y T P V V N D Q N A V V N Y V D Q D N N N A Q - - - - - I A T S G N L T G K P G S L I D Y S T - - A A T I K Q L E D Q G Y V L V S N G F P A G A V F D N D D N T T Q T Y T V V L K H G T T T F K P D K P - G T P G E P I N P N Y P E G P K V T N E D V D Y S K D ................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 3 e-value: 4.0E-13 bit: 78.2 Len: 564 Query Start:46 Query End:609 Subject Strand: null Subject Start: 4000 Subject End: 4171 ............................................. D L N P K P Y P N A - T P A D P T K P G T P T E - T P - - V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A - T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W ................................................................................................................................................................................................................................................................................................................................................................................................................ ............................................. D P T G K P I P N V P T P Q Y P T D P T D P T K V T P N E P V P T I P N Y T P E V P T - - - V T P T D P G - - - - - - - - V D T P V K Y T P N - T V N P K P A V D Q I A V V N Y V D Q D N N N - - - - - - - - A Q I A T S G N L T G K A G S V I N Y S T A D E I K Q L E A H G Y V L V T D G F P V G A T F D D N A D Q N Q V F T V V L K H G H A P V G P K N P - E E P G T P V N P G Y P E G P K W ................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 4 e-value: 4.0E-12 bit: 75.1 Len: 543 Query Start:46 Query End:588 Subject Strand: null Subject Start: 2426 Subject End: 2600 ............................................. P N A T P A - D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y - - E V P D L - P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W ..................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. P D G T P V P N P D K P G E - - N V P N K P Y T N D P T - - - - N P T D V N P K E P V P N I P G Y R P E V P T V T P E V P T K D T P V V Y - - N Q I Q K A D L T I V D Q D N G N K Q I V A S G V T T K F A A D G I N G E A I T F T G N - E A A V K A L E N M G Y V Y V D S D F T S G T K F D G D G A T D Q H F T I T M K H G H Q P V N P N E P - G K P G Q P I N P N D P E G P K Y ..................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 5 e-value: 7.0E-9 bit: 64.3 Len: 531 Query Start:46 Query End:576 Subject Strand: null Subject Start: 1632 Subject End: 1795 ............................................. P A D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L - P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W ................................................................................................................................................................................................................................................................................................................................................................................................................................................. ............................................. P V D P D H N P I P - D A P T P T Y V - - N D P V D P T K V K P N E K T P D V P G W H T D T P N V T P T D P T E D T P V V Y N R D I Q D Q T V T - - V K Y F D D T K E T D L S S Y N K S I - - S A K P G E A L N Y S T Q - - S S I K E L E D K G Y K L V S D N F N V T T M P E K G G S - - - - Y E V H F V H N T T T I T P D K P G - N P G E P I N P N D P E G P K W ................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 6 e-value: 1.0E-6 bit: 56.6 Len: 519 Query Start:100 Query End:618 Subject Strand: null Subject Start: 2710 Subject End: 2855 ................................................................................................... L T A D L N P K P Y P N A T - - - - P A D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L - P T D P T E N T T I T Y V K D G S Q V A I V H F I E - V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P ....................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................... I P V D P T G K P I P N V P T P Q Y P T D P T D P S K V T P N E P V P S I P G L T P - - - - - - - - - - - - - - - - - - - - E V P T V T P T D P G K N T P V K Y S Q T V N - - A T V N Y I D N V T G K T L K T D S L S G L E G V K S D Y S T - - - - - - - - - - K S S I D G Y E A Q G Y K L V K D G F P K D G - Y I F E V G G E H T F N V Y L T H T T S P V T P D H P ....................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q5FKA6 Cluster: Putative mucus binding protein; n=1; Lactobacillus acidophilus|Rep: Putative mucus binding protein - Lactobacillus acidophilus HSP 1 e-value: 6.0E-15 bit: 84.3 Len: 555 Query Start:25 Query End:579 Subject Strand: null Subject Start: 1527 Subject End: 1695 ........................ T P A D P T K P G T P T E T - - P V V P Y I P G T T P V G P N G K P L T P K D P - - N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A - - T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W T P E L I K E .............................................................................................................................................................................................................................................................................................................................................................................................................................................. ........................ T P H F P N D P N D P T K V I P G E K P Y V P G Y H P - - E T G K P G D A V D P A P G D P S K D V E V P Y T P E T P I V D - - - - - - - - - - Q K A V V N Y I D S D E E N - - - - - - - - - K V I T S S G D L I G K P G E Q I D Y T T I P T I T D L T N K G Y V L I Y D G F P T R V T F D D D D G I T Q I F T V V L K H G T Q T V T P E K P G I P G D - P I N P N D P D G P K W S D E T G K D .............................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 4.0E-14 bit: 81.6 Len: 489 Query Start:46 Query End:534 Subject Strand: null Subject Start: 2177 Subject End: 2349 ............................................. V V P Y I P - G T T P V G P N G K P L T P K D P N D P S K - - - - - - - - - - - G Y E V P D L P T - - - - D P T E N T T I T Y V K D G - - - S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T - G K A F T K A A D V T A - T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. I V P V G P D G T T P I P D A P T P S Y K N D P T N P T K V I P D E P V P K V P G Y - T P N T P T V T P G D P T T D T L V P Y T P G N P I T D Q K A V V N Y I D A D - E G N K V - - - - - - - - I I S S G N L I G K A G D K V D Y N T S D T I K N L E N K G Y V L V H N G F P D G V T F D N D D S T I Q T Y T V I L K H G T T T V I P D K P - G K P G E P I N P N D P D G P K W ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 2.0E-7 bit: 59.3 Len: 534 Query Start:46 Query End:579 Subject Strand: null Subject Start: 1774 Subject End: 1958 ............................................. T P A D P T K P G T P T E T P - - - V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D - - - - - - - - - - - - - - - - L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K - - P I T V N P N D P T P T K D Q P I D P N N P T G P K W .............................................................................................................................................................................................................................................................................................................................................................................................................................................. ............................................. T P D D L N K M L V V R Y T P N G K I I P V D P A G N P I P N V P T P Q Y P T D P T D P T K - - V V P D E P V P A I P G Y R P S T P I V T P T D P D K D T P V P Y A P I Q G S I Q V I F H D D T S N Q T - - I P D V G Y N S G V Q D E G - T R I D Y T T N K N I T D L I N - - - - K G Y V Y V G - - - - T D G N V P A E I V A D Q N I T I T V H M K H G T T T I T P D Q P G K P - G E P I N P N D P N G P K W .............................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: UniRef90_Q2V688 Cluster: Large variant muramidase-released protein; n=4; Streptococcus suis|Rep: Large variant muramidase-released protein - Streptococcus suis HSP 1 e-value: 2.0E-14 bit: 82.4 Len: 516 Query Start:61 Query End:576 Subject Strand: null Subject Start: 899 Subject End: 1057 ............................................................ P A D P T K P G T P T E T P V V P Y I P G T T P V G P - N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A - E S V V D T G D T G K A F T K A A D V T A T I - - E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P ................................................................................................................................................................................................................................................................................................................................................................................................................................................. ............................................................ P I D P T T P G T N G E V P N I P Y V P G Y T P V D P K D N T P L K P I D P N D P G K G Y - V P P T P E N P G V D T P I P Y V - P V K K V V T N H V D E E G N P I A P Q E E G T K P N K S I P G Y E F T G K T V T D E D G N T T H I Y K K T P E V K N G T V V V N Y V T E D G T - - - - - - - - - - - - - - V I K E P V T D T P T S P E G T P Y D T T D - N K P ................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: UniRef90_P32653 Cluster: Muramidase-released protein precursor; n=17; Streptococcus suis|Rep: Muramidase-released protein precursor - Streptococcus suis HSP 1 e-value: 2.0E-14 bit: 82.4 Len: 516 Query Start:61 Query End:576 Subject Strand: null Subject Start: 892 Subject End: 1050 ............................................................ P A D P T K P G T P T E T P V V P Y I P G T T P V G P - N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A - E S V V D T G D T G K A F T K A A D V T A T I - - E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P ................................................................................................................................................................................................................................................................................................................................................................................................................................................. ............................................................ P I D P T T P G T N G E V P N I P Y V P G Y T P V D P K D N T P L K P I D P N D P G K G Y - V P P T P E N P G V D T P I P Y V - P V K K V V T N H V D E E G N P I A P Q E E G T K P N K S I P G Y E F T G K T V T D E D G N T T H I Y K K T P E V K N G T V V V N Y V T E D G T - - - - - - - - - - - - - - V I K E P V T D T P T S P E G T P Y D T T D - N K P ................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: UniRef90_Q301T2 Cluster: Surface protein from Gram-positive cocci, anchor region; n=1; Streptococcus suis 89/1591|Rep: Surface protein from Gram-positive cocci, anchor region - Streptococcus suis 89/1591 HSP 1 e-value: 3.0E-14 bit: 82.0 Len: 516 Query Start:61 Query End:576 Subject Strand: null Subject Start: 727 Subject End: 885 ............................................................ P A D P T K P G T P T E T P V V P Y I P G T T P V G P - N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A - E S V V D T G D T G K A F T K A A D V T A T I - - E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P ................................................................................................................................................................................................................................................................................................................................................................................................................................................. ............................................................ P I D P T T P G T N G E V P N I P Y V P G Y T P V D P K D N T P L K P I D P N D P G K G Y - V P P T P E N P G V D T P I P Y V - P V K K V V T N H V D E E G N P V A P Q E E G T K P N K S I P G Y E F T G K T V T D E D G N T T H I Y K K T P E V K N G T V V V N Y V T E D G T - - - - - - - - - - - - - - V I K D P V T D T P T S P E G T P Y D T T D - N K P ................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: UniRef90_Q9GL34 Cluster: Homologue of human Hr44; n=1; Bos taurus|Rep: Homologue of human Hr44 - Bos taurus (Bovine) HSP 1 e-value: 3.0E-13 bit: 79.0 Len: 573 Query Start:46 Query End:618 Subject Strand: null Subject Start: 214 Subject End: 385 ............................................. L T A D L N P K P Y P N A - T P A D P T K P G T P T E T - - - P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T - - F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W ....................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. I P V D P S G N P I P D A P T P Q Y P N D P T D P T K T T P N Q P V P T I P G M T P Q T P - - - V V T P K Q P G K D T P V T Y V P V V P E K Q L Q T A K I V Y V - - - - - - - - - - - - - - - - - - - D T K T G K T L E T D T V T G K S G E K I D - - Y P T T P R I D E W R D K G Y R L V E D G F A E A G T P V Y D D N D D V E Q I F I V K L D H D T A P V G P N D P - H E P E T P I N P N D P N G P K W ....................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-7 bit: 60.5 Len: 540 Query Start:37 Query End:576 Subject Strand: null Subject Start: 58 Subject End: 256 .................................... P A D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L - - - - T P K D P N D P S K - - - G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K - - T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S - - - - - - - - K T N Q V Y K V L V T A K P I T - - - - - V N P N D P T - P T K D Q P I D P N N P T G P K W T P E ................................................................................................................................................................................................................................................................................................................................................................................................................................................. .................................... P A K P T V Q E N I T D K V V Y K P M G K I V P V D P S G N P I P D A P T P Q Y P N D P T K T T P N Q P V P S I P G M T P E K P A V T P E N P G Q D T K V V Y E M D K H S L T E R F V D E A G N E L E A S V V K G E D - - - Y V K N T P Y D V T G D S K V I K G Y Y L K A V P D N A K G T F G D D N V T V T F T Y A K L G K I I P V D P S G N P I P D A P T P Q Y P N D P T D P T K T T P N Q P - V P T I P G M T P Q ................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: UniRef90_Q1EUK6 Cluster: Hypothetical protein; n=1; Clostridium sp. OhILAs|Rep: Hypothetical protein - Clostridium sp. OhILAs HSP 1 e-value: 2.0E-11 bit: 72.8 Len: 132 Query Start:862 Query End:993 Subject Strand: null Subject Start: 10 Subject End: 53 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. K K Q I P L R L S T K L Y A A L A S W A E D D F R S V N G Q I E Y L L T E C V K Q Q K K ................ ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. K K Q L L L R L S S S L W K D L A Q W A E D D F R S I N G Q I E Y L L T E C V K Q H K K ................ Subject: UniRef90_Q74HA8 Cluster: Hypothetical protein; n=1; Lactobacillus johnsonii|Rep: Hypothetical protein - Lactobacillus johnsonii HSP 1 e-value: 9.0E-9 bit: 63.9 Len: 549 Query Start:46 Query End:594 Subject Strand: null Subject Start: 509 Subject End: 666 ............................................. P Y P N A - T P A - - - D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W ............................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. P I P N A P T P Q Y T N S P T N P S A V E P N E P V P N I P G Y T P - - - K V S T V T P T D P G T D T K V I Y V P - - - - - - - - - - - - - - I E Q G S I T V T V H D V T D N V N L P Q Y G K S S G E Q - - - - - - D V G T R F T Y - - D K N T V I T D L E N K G Y K V L N P D V V I P T T I - - - S K G A Q N I V I N V E H E L V P V T P E N P G - T P G Q P I N P N N P D G P K W ............................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-7 bit: 57.8 Len: 561 Query Start:43 Query End:603 Subject Strand: null Subject Start: 776 Subject End: 948 .......................................... N P K P Y P N A T - P A D P T K P G T P T E T P V - - V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P - - I T V N P N - D P T P T K D Q P I D P N N P T G P K W T ...................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................... N G Q P I P D A P Q P Q F P T N P D N P T G T T P S E V P V V P G Y H P - - E N G K P - - - G D P V D P V P G K P G E D V P V K Y V P D T P T P E T Y N G S Q T - - I K F V D G N G T E L H T P D T Q T A T N L T G E H T F G K I N T P V I K G Y T T T E T - T A G G A T V T K N N - - - - - - - - - - - - P N A V I T V T Y T P N G H I I P V G P D G K P I P D A P Q P Q F P T N P D N P S E T ...................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q1UB70 Cluster: Hypothetical protein precursor; n=1; Lactobacillus reuteri 100-23|Rep: Hypothetical protein precursor - Lactobacillus reuteri 100-23 HSP 1 e-value: 1.0E-8 bit: 63.5 Len: 573 Query Start:46 Query End:618 Subject Strand: null Subject Start: 3915 Subject End: 4084 ............................................. L T A D L N P K P Y P N A - T P A - - - D P T K P G T P T E T P V V P Y I P G T T P V G P N G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T - V N P N D P T P T K D Q P I D P N N P T G P K W ....................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. I P V D P S G N P I P D A P T P S Y H N D P T D P T K V T P N E P T P T V P G W T T N V P N - - - V T P D T P T G D T K - - - V P Y T K P T P T Q D - - - - - - - K G S I T I T V H - - D V T D N T D L P E Y G K T S G S - - - - Q N V G T E F - - S Y D K T G T F T S L T N K G Y K I V - N P D V T I P T G I T K G D Q N I V I Y V E H T T T P I T P E N P G K P - - - - G Q P I N P N D P T G P Q Y ....................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q88WI9 Cluster: Cell surface protein; n=1; Lactobacillus plantarum|Rep: Cell surface protein - Lactobacillus plantarum HSP 1 e-value: 2.0E-7 bit: 59.3 Len: 534 Query Start:46 Query End:579 Subject Strand: null Subject Start: 803 Subject End: 967 ............................................. T P A D P T K P G T P T - - - E T P V V P Y I P G T T P V G P N - G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W .............................................................................................................................................................................................................................................................................................................................................................................................................................................. ............................................. T Q V D A S E T G T A T H A T D A T A T D Y L T Y T T A A K P K T G Y V L A P - - - - - - N T G L A Y N G T L T D Q G G T V T Y R Y L A K T E T A I V T Y F D Q T D N K V I K T E P L Q G A Y G T T D A Y R T A D - - - - - - - - - - T I A A Y E N A G Y D L V S D D Y P T A G V V Y D Q D G S V Q E Y Q V T L V H K F V T R T P D N P - G T P G E P I D P D N P N G P T Y .............................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 1.0E-6 bit: 56.6 Len: 378 Query Start:46 Query End:423 Subject Strand: null Subject Start: 1476 Subject End: 1590 ............................................. D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. D A D T N I V V T Y - Q A K P E N A T V T Y V D V T - - - - - T G K T L A I K S L T G D Y Q T T S S Y R T A E T I A S Y V K - - - - N G Y Q L V R D N Y P T S G A V F D V N N F A K T Y T V T L K H K L V T V T P E N P - G T P G Q P I D P D N P D G P K Y .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 1.0E-6 bit: 56.6 Len: 381 Query Start:46 Query End:426 Subject Strand: null Subject Start: 1682 Subject End: 1797 ............................................. T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A - T I E A L K A K G Y T V V E N N Y P T D G - T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. T D S D T Q V V V T Y A A K P E K A T V T Y - - - V D V T T G K T - - - - - - - - L V T A N L T G D Y R T Q S N Y R T A E T I A G Y V K N G Y E L V R D N Y P V S G M L F D V D D F A - K T Y T V T L K H K L V T V T P G N P - G T P G Q P I D P D N P D G P K Y ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 9.0E-6 bit: 53.9 Len: 369 Query Start:46 Query End:414 Subject Strand: null Subject Start: 1062 Subject End: 1175 ............................................. E N T T I - - T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................. D D T T I P V T Y T V N T E Y A T V T Y F D Q T D N K V I K T E P L Q G A Y G T T D A Y R T A D - - - - - - - - - - T I A A Y E N A G Y Q L Y R D D Y P T A G V I Y D H D G S V Q K Y Q V T L V H K F V T R T P D N P - G T P G E P I D P D N P N G P T Y ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_A0V2S7 Cluster: Hypothetical protein; n=1; Clostridium cellulolyticum H10|Rep: Hypothetical protein - Clostridium cellulolyticum H10 HSP 1 e-value: 2.0E-7 bit: 59.3 Len: 162 Query Start:832 Query End:993 Subject Strand: null Subject Start: 4 Subject End: 58 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... K K Q I P L R L S T K L Y A A L A S W A E D D F R S V N G Q I E Y L L T E C V K Q Q K K D G - K Y V S E T I D ................ ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... K K T L L L R L S P K L W E E I S K W A E D E F R S V N G Q I E Y I I S E A L R K R N K S A H K I V S D S E D ................ Subject: UniRef90_Q03T21 Cluster: Possible cell surface protein; n=1; Lactobacillus brevis ATCC 367|Rep: Possible cell surface protein - Lactobacillus brevis (strain ATCC 367 / JCM 1170) HSP 1 e-value: 5.0E-7 bit: 58.2 Len: 534 Query Start:46 Query End:579 Subject Strand: null Subject Start: 747 Subject End: 911 ............................................. T P A D P T K P G T P T - - - E T P V V P Y I P G T T P V G P N - G K P L T P K D P N D P S K G Y E V P D L P T D P T E N T T I T Y V K D G S Q V A I V H F I E V N S E T D K T E K G A V A E S V V D T G D T G K A F T K A A D V T A T I E A L K A K G Y T V V E N N Y P T D G T F D A D S K T N Q V Y K V L V T A K P I T V N P N D P T P T K D Q P I D P N N P T G P K W .............................................................................................................................................................................................................................................................................................................................................................................................................................................. ............................................. T Q V D A T E T G T A T H A T D A T A A D Y L T Y T T V D K P K T G Y A L A P - - - - - - N T G L A Y N G T L T D Q G G T V T Y L Y L A K T E T A I V T Y F D Q T D N K V I K T E T L Q G A Y G T T D A Y R T A D - - - - - - - - - - T I A A Y E N A G Y D L V I D D Y P T A G V V Y D Q D G S I Q K Y Q V T L D H K F V T R T P D N P - G T P G E P I D P D N P N G P T Y .............................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: UniRef90_Q5L313 Cluster: Hypothetical conserved protein; n=1; Geobacillus kaustophilus|Rep: Hypothetical conserved protein - Geobacillus kaustophilus HSP 1 e-value: 8.0E-7 bit: 57.4 Len: 141 Query Start:853 Query End:993 Subject Strand: null Subject Start: 4 Subject End: 50 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... K K Q I P L R L S T K L Y A A L A S W A E D D F R S V N G Q I E Y L L T E C V K Q Q K K D G K ................ .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... K K S F P L R I D Y D L Y A I L E Q W A Q D E F R S V N A Q I E Y L L R E A A K R A G R L G K ................ Subject: UniRef90_Q1J3S8 Cluster: Hypothetical protein; n=1; Deinococcus geothermalis DSM 11300|Rep: Hypothetical protein - Deinococcus geothermalis (strain DSM 11300) HSP 1 e-value: 1.0E-6 bit: 57.0 Len: 123 Query Start:871 Query End:993 Subject Strand: null Subject Start: 3 Subject End: 43 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... K K Q I P L R L S T K L Y A A L A S W A E D D F R S V N G Q I E Y L L T E C V K Q ................ ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... R K H Y P L R I S P E L Y A A L E R W A A D E L R S V N A Q I E Y L L T Q S V R Q ................ Subject: UniRef90_A4IK87 Cluster: Hypothetical protein; n=1; Geobacillus thermodenitrificans NG80-2|Rep: Hypothetical protein - Geobacillus thermodenitrificans NG80-2 HSP 1 e-value: 2.0E-6 bit: 56.2 Len: 141 Query Start:853 Query End:993 Subject Strand: null Subject Start: 4 Subject End: 50 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... K K Q I P L R L S T K L Y A A L A S W A E D D F R S V N G Q I E Y L L T E C V K Q Q K K D G K ................ .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... K K Q F P L R I D H D L Y A V L E Q W A Q D E F R S V N S H I E F L L R E A A K R A G R L G K ................ Subject: UniRef90_Q81ZG6 Cluster: Conserved domain protein; n=7; Bacillus cereus group|Rep: Conserved domain protein - Bacillus anthracis HSP 1 e-value: 9.0E-6 bit: 53.9 Len: 132 Query Start:862 Query End:993 Subject Strand: null Subject Start: 4 Subject End: 47 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. K K Q I P L R L S T K L Y A A L A S W A E D D F R S V N G Q I E Y L L T E C V K Q Q K K ................ ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. K K S F P L R I D P E L H A V I E K W A N D E F R S V N A H I E Y L L R E M A K Q K G K ................ ttcctctttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaattaattaannnnnttttgatttctcctttaggtatttatattcgattcaatctactgattttcatcaaccatactaggataacacattttttttgtaaagtaaagttacttgacaaaaaaagatgaaaaaattctcctgtcagacctagcagacaggagaaggtgttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttagcttcaaccatct Predict ORF larger than 30AA ================================================ Protein_Len: 40 Strand: + Start: 242 End: 361 ................................................................................................................................................................................................................................................. M V A V T S A A L V N A F P V S P V S T T D S A T A P F S V L S V S L F T S M K ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 37 Strand: + Start: 493 End: 603 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M W S Y R C C S R N V W N Y W S F S R C P W F C R I C W S C I W I W F W I ...................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 401 End: 643 ................................................................................................................................................................................................................................................................................................................................................................................................................ M V V F S V G S V G K S G T S Y P L L G S L G S F G V N G F P F G P T G V V P G M Y G T T G V S V G V P G F V G S A G V .............................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 40 Strand: + Start: 646 End: 765 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M X X X L I S P L G I Y I R F N L L I F I N H T R I T H F F C K V K L L D K K R .................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 812 End: 994 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M S I S N G S S M V S D T Y F P S F F C C L T H S V R R Y S I C P L T E R K S S S A H D A S A A Y N F V E S R R G I C F ............... Protein_Len: 31 Strand: + Start: 915 End: 1007 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M N E S H L L P M M R V Q R I T L L R V E G G S A F F S F N H .. Protein_Len: 58 Strand: - Start: 811 End: 984 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... I D I E F P E D I T E S V Y K G D K K Q Q K V C E T L L Y E I Q G N V S R F D D E A W S A L A A Y L K T S L R L P M ......................... Protein_Len: 60 Strand: - Start: 681 End: 1007 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ N T L P K Q Y T N E T K R R N N S V N Q L S I N S K G M S Q V F T M K Q G H H S H L T Y S Q Q S D F P S R S K K A E V M .. Protein_Len: 32 Strand: - Start: 375 End: 470 ...................................................................................................................................................................................................................................................................................................................................................................................... K H D M K L M P L Q L T R Q Q I Q Q Y T Q Y K M D K A Q I T L M ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 1 End: 618 V E Y G K S P D N P D K P T L P K G N P G V P T T G P I Y P V V P T E T P T G P K T P D A P T A N P Y P K P N L D A T M ....................................................................................................................................................................................................................................................................................................................................................................................................... ttcctctttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaattaattaannnnnttttgatttctcctttaggtatttatattcgattcaatctactgattttcatcaaccatactaggataacacattttttttgtaaagtaaagttacttgacaaaaaaagatgaaaaaattctcctgtcagacctagcagacaggagaaggtgttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttagcttcaaccatct Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: - Score: 81 Start: 713 End: 742 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTACAAAAAAAATGTGTTATCCTAGTAT........................................................................................................................................................................................................................................................................... Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ ttcctctttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaattaattaannnnnttttgatttctcctttaggtatttatattcgattcaatctactgattttcatcaaccatactaggataacacattttttttgtaaagtaaagttacttgacaaaaaaagatgaaaaaattctcctgtcagacctagcagacaggagaaggtgttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttagcttcaaccatct Predict TransTerm conf > 70================================================ TransTerm Strand: + Conf: 47 HP_score: -4.3 Tail_Score: -2.58544 Start: 291 End: 305 Full_Region: CTTTTCCTGTATCAC CAGTA TCTAC TACTG ATTCTGCAACTGCAC ..................................................................................................................................................................................................................................................................................................CAGTATCTACTACTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: - Conf: 73 HP_score: -9.9 Tail_Score: -2.5214 Start: 730 End: 763 Full_Region: gagaattttttcatc tttttttgtcaagta actt tactttacaaaaaaa atgtgttatcctagt .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttttttgtcaagtaactttactttacaaaaaaa...................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 100 HP_score: -10.8 Tail_Score: -5.38348 Start: 774 End: 803 Full_Region: ttgatatttaacacc ttctcctgtctg ctaggt ctgacaggagaa ttttttcatcttttt .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttctcctgtctgctaggtctgacaggagaa.............................................................................................................................................................................................................. Find igs database================================================ Query_seq: SMT_1561:SMT_1562|SMT_1561:SMT_1562:putative mucus binding protein:hypothetical protein:<-<-:1553900..1554908 1009 ttcctctttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaattaattaannnnnttttgatttctcctttaggtatttatattcgattcaatctactgattttcatcaaccatactaggataacacattttttttgtaaagtaaagttacttgacaaaaaaagatgaaaaaattctcctgtcagacctagcagacaggagaaggtgttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttagcttcaaccatct Intra-Species Hit: Count: 1 Min: 639 Max: 810 Len: 172 Subject: smit_SMT_1561_SMT_1562|putative mucus binding protein:hypothetical protein|NEGATIVE:NEGATIVE|[1553900,1554908]|1009 HSP 1 e-value: 9.0E-37 bit: 157.0 Len: 118 Query Start:639 Query End:756 Subject Strand: POSITIVE Subject Start: 639 Subject End: 756 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttaattaattaannnnnttttgatttctcctttaggtatttatattcgattcaatctactgattttcatcaaccatactaggataacacannnnnnnngtaaagtaaagttacttgac............................................................................................................................................................................................................................................................. ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttaattaattaannnnnttttgatttctcctttaggtatttatattcgattcaatctactgattttcatcaaccatactaggataacacattttttttgtaaagtaaagttacttgac............................................................................................................................................................................................................................................................. HSP 2 e-value: 1.0E-11 bit: 73.8 Len: 37 Query Start:774 Query End:810 Subject Strand: POSITIVE Subject Start: 774 Subject End: 810 .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttctcctgtcagacctagcagacaggagaaggtgtta....................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttctcctgtcagacctagcagacaggagaaggtgtta....................................................................................................................................................................................................... Inter-species Hit: Count: 3 Min: 657 Max: 756 Len: 100 Subject: NC_008533_SPD_1962_SPD_1963|hypothetical protein:ribosomal protein L32|POSITIVE:POSITIVE|[1932134,1932487]|354 HSP 1 e-value: 6.0E-35 bit: 151.0 Len: 100 Query Start:657 Query End:756 Subject Strand: NEGATIVE Subject Start: 255 Subject End: 354 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgatttctcctttaggtatttatattcgattcaatctactgattttcatcaaccatactaggataacacannnnnnnngtaaagtaaagttacttgac............................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgatttctcctttaggtatttatattcgattcaatctactgattttcatcaaccatactaggataacacattttttttgtaaagtaaagttacttgac............................................................................................................................................................................................................................................................. Subject: NC_003098_spr1942_spr1943|hypothetical protein:50S ribosomal protein L32|POSITIVE:POSITIVE|[1924805,1924955]|151 HSP 1 e-value: 6.0E-35 bit: 151.0 Len: 100 Query Start:657 Query End:756 Subject Strand: NEGATIVE Subject Start: 52 Subject End: 151 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgatttctcctttaggtatttatattcgattcaatctactgattttcatcaaccatactaggataacacannnnnnnngtaaagtaaagttacttgac............................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgatttctcctttaggtatttatattcgattcaatctactgattttcatcaaccatactaggataacacattttttttgtaaagtaaagttacttgac............................................................................................................................................................................................................................................................. Subject: NC_003028_SP_2133_SP_2134|hypothetical protein:50S ribosomal protein L32|POSITIVE:POSITIVE|[2045666,2045816]|151 HSP 1 e-value: 6.0E-35 bit: 151.0 Len: 100 Query Start:657 Query End:756 Subject Strand: NEGATIVE Subject Start: 52 Subject End: 151 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgatttctcctttaggtatttatattcgattcaatctactgattttcatcaaccatactaggataacacannnnnnnngtaaagtaaagttacttgac............................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttgatttctcctttaggtatttatattcgattcaatctactgattttcatcaaccatactaggataacacattttttttgtaaagtaaagttacttgac............................................................................................................................................................................................................................................................. Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UUUGAUUUCUCCUUUAGGUAUUUAUAUUCGAUUCAAUCUACUGAUUUUCAUCAACCAUACUAGGAUAACACAUUUUUUUUGUAAAGUAAAGUUACUUGAC .............((((((((((((....(((..((((....))))...)))..((......)).....................)))))..))))))). ( -8.90) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ GUCAAGUAACUUUACUUUACAAAAAAAAUGUGUUAUCCUAGUAUGGUUGAUGAAAAUCAGUAGAUUGAAUCGAAUAUAAAUACCUAAAGGAGAAAUCAAA ((.(((((....))))).))........((.....((((.((((..(((((...((((....))))..)))))......))))....)))).....)).. (-14.60) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 286 50 6 136 94 smit:SMT_1573|5end_MutT/NUDIX_family_protein_1566413..1566643_POSITIVE 275 67 28 57 12 smit:SMT_1088|5end_hypothetical_protein_1024346..1024576_NEGATIVE 263 62 28 229 193 smit:SMT_1087|5end_K01990_ABC-2_type_transport_system_ATP-binding_protein_1024165..1024395_NEGATIVE 239 52 11 98 49 smit:SMT_966|5end_transcriptional_regulator,_TetR_family_912191..912421_NEGATIVE 231 87 41 217 170 smit:SMT_1159|5end_hypothetical_protein_1104544..1104774_NEGATIVE 224 32 3 116 93 smit:SMT_1268|5end_acetoin_reductase_1233419..1233649_NEGATIVE 221 73 37 69 36 smit:SMT_1068|5end_ATP-dependent_DNA_helicase_RecG_1006891..1007121_POSITIVE 220 50 8 150 98 smit:SMT_548|5end_K02035_peptide/nickel_transport_system_substrate-binding_protein_464992..465222_POSITIVE 213 67 30 77 43 smit:SMT_1975|5end_hypothetical_protein_predicted_by_Glimmer/Critica_1906138..1906368_POSITIVE 204 99 55 224 187 smit:SMT_2089|5end_dTDP-4-dehydrorhamnose_3,5-epimerase_related_enzyme_1984987..1985217_POSITIVE 204 99 55 224 187 smit:SMT_291|5end_dTDP-4-dehydrorhamnose_3,5-epimerase_234197..234427_POSITIVE 197 99 53 64 11 smit:SMT_1307|5end_glycerol_uptake_facilitator_protein_1271664..1271894_POSITIVE 190 65 26 51 1 smit:SMT_392|5end_acetyltransferase,_GNAT_family_323616..323846_POSITIVE 189 82 41 88 51 smit:SMT_1644|5end_3-isopropylmalate_dehydrogenase_1630704..1630934_POSITIVE 188 89 47 63 14 smit:SMT_2021|5end_K06201_copper_homeostasis_protein_1937888..1938118_POSITIVE 188 58 12 58 10 smit:SMT_1259|5end_hypothetical_protein_1225139..1225369_POSITIVE 188 50 1 65 7 smit:SMT_763|5end_alpha-amylase_667866..668096_POSITIVE 186 82 45 208 165 smit:SMT_1199|5end_lactococcin_A_ABC_transporter_permease_protein_1161063..1161293_NEGATIVE 185 75 35 39 5 smit:SMT_1398|5end_dihydroorotase_1373204..1373434_POSITIVE 182 67 21 231 193 smit:SMT_1866|5end_extramembranal_protein_1827290..1827520_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 286 50 6 113 71 smit:SMT_1572|3end_excinuclease_ABC_subunit_B_1566470..1566620_POSITIVE 275 67 28 60 15 smit:SMT_1089|3end_hypothetical_protein_1024343..1024493_NEGATIVE 246 58 12 131 78 smit:SMT_1253|3end_beta-galactosidase_1212912..1213062_NEGATIVE 239 52 11 74 25 smit:SMT_967|3end_K01992_ABC-2_type_transport_system_permease_protein_912215..912365_NEGATIVE 231 87 41 141 94 smit:SMT_1160|3end_K03152_4-methyl-5(b-hydroxyethyl)-thiazole_monophosphate_biosynthesis_1104620..1104770_NEGATIVE 221 73 37 50 17 smit:SMT_1067|3end_alanine_racemase_1006952..1007102_POSITIVE 220 50 8 127 75 smit:SMT_547|3end_branched-chain_amino_acid_aminotransferase_465049..465199_POSITIVE 204 78 37 146 111 smit:SMT_1357|3end_endo-beta-N-acetylglucosaminidase_1334450..1334600_NEGATIVE 189 82 41 76 39 smit:SMT_1643|3end_2-isopropylmalate_synthase_1630772..1630922_POSITIVE 184 60 21 151 125 smit:SMT_1568|3end_putative_transketolase_C-terminal_section_1561134..1561284_POSITIVE 184 50 2 118 53 smit:SMT_1463|3end_phosphate_transport_system_protein_PhoU_1444643..1444793_POSITIVE 179 59 17 52 3 smit:SMT_1736|3end_acetyltransferase,_GNAT_family_1719862..1720012_POSITIVE 179 53 11 128 75 smit:SMT_1505|3end_purine-nucleoside_phosphorylase_1487805..1487955_NEGATIVE 179 50 3 116 72 smit:SMT_146|3end_sugar_transport_system_permease_protein_97382..97532_POSITIVE 179 50 3 116 72 smit:SMT_118|3end_K02026_multiple_sugar_transport_system_permease_protein_70433..70583_POSITIVE 176 99 54 124 85 smit:SMT_446|3end_ABC-type_cobalt_transport_system,_ATPase_component_386335..386485_POSITIVE 175 64 27 148 103 smit:SMT_992|3end_hypothetical_protein_934529..934679_NEGATIVE 174 66 22 143 85 smit:SMT_727|3end_phage_transcriptional_repressor_631830..631980_NEGATIVE 173 59 25 145 112 smit:SMT_1684|3end_acetyltransferase,_GNAT_family_1667248..1667398_NEGATIVE 173 52 11 90 41 smit:SMT_1295|3end_transcriptional_regulator_CtsR_1257368..1257518_POSITIVE