Origin IGS: tgcataagaaaacccaccaattcaggtgggatttttgtttattaatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 tcttatactcttcgaaaatctcttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgtggctagcttcctagtttgctctttgattttcattgagtattaataaacaaaaatcccacctgaattggtgggttttcttatgca Mask Tandem Repeat Region ================================================ tgcataagaaaacccaccaattcaggtgggatttttgtttattaatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga Find is-nt database================================================ Query_seq: SMT_1535:SMT_1536|SMT_1535:SMT_1536:exodeoxyribonuclease V alpha chain:trigger factor:-><-:1520574..1520725 152 tgcataagaaaacccaccaattcaggtgggatttttgtttattaatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: SMT_1535:SMT_1536|SMT_1535:SMT_1536:exodeoxyribonuclease V alpha chain:trigger factor:-><-:1520574..1520725 152 tgcataagaaaacccaccaattcaggtgggatttttgtttattaatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: SMT_1535:SMT_1536|SMT_1535:SMT_1536:exodeoxyribonuclease V alpha chain:trigger factor:-><-:1520574..1520725 152 tgcataagaaaacccaccaattcaggtgggatttttgtttattaatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 tgcataagaaaacccaccaattcaggtgggatttttgtttattaatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga Predict ORF larger than 30AA ================================================ tgcataagaaaacccaccaattcaggtgggatttttgtttattaatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ tgcataagaaaacccaccaattcaggtgggatttttgtttattaatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga Predict TransTerm conf > 70================================================ Find igs database================================================ Query_seq: SMT_1535:SMT_1536|SMT_1535:SMT_1536:exodeoxyribonuclease V alpha chain:trigger factor:-><-:1520574..1520725 152 tgcataagaaaacccaccaattcaggtgggatttttgtttattaatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga Intra-Species Hit: Count: 49 Min: 1 Max: 152 Len: 152 Subject: smit_SMT_1535_SMT_1536|exodeoxyribonuclease V alpha chain:trigger factor|POSITIVE:NEGATIVE|[1520574,1520725]|152 HSP 1 e-value: 3.0E-81 bit: 301.0 Len: 152 Query Start:1 Query End:152 Subject Strand: POSITIVE Subject Start: 1 Subject End: 152 tgcataagaaaacccaccaattcaggtgggatttttgtttattaatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga tgcataagaaaacccaccaattcaggtgggatttttgtttattaatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga Subject: smit_SMT_915_SMT_916|sucrose operon repressor:3-hydroxy-3-methylglutaryl-CoA reductase|POSITIVE:NEGATIVE|[868680,868819]|140 HSP 1 e-value: 4.0E-47 bit: 188.0 Len: 103 Query Start:45 Query End:147 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 103 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... ............................................atactcaatgaaaatcaaagagcgaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... Subject: smit_SMT_1476_SMT_1477|thiol peroxidase:K02077 zinc/manganese transport system substrate-binding protein|NEGATIVE:NEGATIVE|[1459310,1459536]|227 HSP 1 e-value: 9.0E-45 bit: 180.0 Len: 103 Query Start:45 Query End:147 Subject Strand: POSITIVE Subject Start: 125 Subject End: 227 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta..... Subject: smit_SMT_1670_SMT_1671|K02030 polar amino acid transport system substrate-binding protein:hypothetical protein|POSITIVE:NEGATIVE|[1659356,1659481]|126 HSP 1 e-value: 5.0E-43 bit: 174.0 Len: 107 Query Start:46 Query End:152 Subject Strand: POSITIVE Subject Start: 1 Subject End: 108 .............................................tactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtataaga .............................................tactcaatgaaaatcaaagagcaaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagtataaga Subject: smit_SMT_1068_SMT_1069|ATP-dependent DNA helicase RecG:acetyl xylan esterase, putative|POSITIVE:POSITIVE|[1009047,1009469]|423 HSP 1 e-value: 3.0E-41 bit: 168.0 Len: 104 Query Start:45 Query End:148 Subject Strand: POSITIVE Subject Start: 21 Subject End: 125 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagtat.... Subject: smit_SMT_798_SMT_799|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[707167,707385]|219 HSP 1 e-value: 3.0E-41 bit: 168.0 Len: 109 Query Start:40 Query End:148 Subject Strand: POSITIVE Subject Start: 109 Subject End: 217 .......................................tattaatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... .......................................tatttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtat.... Subject: smit_SMT_833_SMT_834|hypothetical protein predicted by Glimmer/Critica:hypothetical protein|NEGATIVE:NEGATIVE|[775453,775606]|154 HSP 1 e-value: 5.0E-40 bit: 165.0 Len: 103 Query Start:45 Query End:147 Subject Strand: POSITIVE Subject Start: 52 Subject End: 154 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... ............................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaagagattttcgaagagta..... Subject: smit_SMT_482_SMT_483|hypothetical protein predicted by Glimmer/Critica:transcriptional activator TipA, putative|NEGATIVE:POSITIVE|[418627,418966]|340 HSP 1 e-value: 8.0E-39 bit: 161.0 Len: 104 Query Start:45 Query End:148 Subject Strand: NEGATIVE Subject Start: 224 Subject End: 328 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagtat.... Subject: smit_SMT_1963_SMT_1964|ribonuclease BN, putative:sodium/hydrogen exchanger family protein|NEGATIVE:NEGATIVE|[1896553,1896685]|133 HSP 1 e-value: 1.0E-37 bit: 157.0 Len: 104 Query Start:45 Query End:148 Subject Strand: POSITIVE Subject Start: 26 Subject End: 130 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... ............................................atactcmatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagtat.... Subject: smit_SMT_2133_SMT_2134|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[2014098,2014211]|114 HSP 1 e-value: 2.0E-36 bit: 153.0 Len: 100 Query Start:49 Query End:148 Subject Strand: NEGATIVE Subject Start: 14 Subject End: 114 ................................................tcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... ................................................tcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagtat.... Subject: smit_SMT_1766_SMT_1767|sucrose-6-phosphate hydrolase:oxidoreductase, short chain dehydrogenase/reductase family|POSITIVE:NEGATIVE|[1743162,1743332]|171 HSP 1 e-value: 2.0E-36 bit: 153.0 Len: 104 Query Start:45 Query End:148 Subject Strand: NEGATIVE Subject Start: 7 Subject End: 111 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagtcgcaagctgtacttgagtacggtgaggcgacgctgacgtggtttgaatttgattttcgaagagtat.... Subject: smit_SMT_872_SMT_873|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[820709,820822]|114 HSP 1 e-value: 2.0E-36 bit: 153.0 Len: 100 Query Start:49 Query End:148 Subject Strand: NEGATIVE Subject Start: 14 Subject End: 114 ................................................tcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... ................................................tcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagtat.... Subject: smit_SMT_384_SMT_385|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[319921,320034]|114 HSP 1 e-value: 2.0E-36 bit: 153.0 Len: 100 Query Start:49 Query End:148 Subject Strand: POSITIVE Subject Start: 1 Subject End: 101 ................................................tcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... ................................................tcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagtat.... Subject: smit_SMT_1601_SMT_1602|hypothetical protein predicted by Glimmer/Critica:hypothetical protein|POSITIVE:POSITIVE|[1592204,1592524]|321 HSP 1 e-value: 5.0E-34 bit: 145.0 Len: 108 Query Start:43 Query End:150 Subject Strand: NEGATIVE Subject Start: 189 Subject End: 297 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtataa.. ..........................................taatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagtataa.. Subject: smit_SMT_2108_SMT_2109|adenylosuccinate lyase:hypothetical protein predicted by Glimmer/Critica|NEGATIVE:NEGATIVE|[1998942,1999150]|209 HSP 1 e-value: 2.0E-33 bit: 143.0 Len: 103 Query Start:45 Query End:147 Subject Strand: POSITIVE Subject Start: 106 Subject End: 209 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagta..... ............................................atactcaatgaaaatcaaagagcaaactagaaagctagccacaggctgtacttgagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagta..... Subject: smit_SMT_1849_SMT_1850|hypothetical protein:K01421 putative membrane protein|POSITIVE:POSITIVE|[1813865,1815201]|1337 HSP 1 e-value: 2.0E-33 bit: 143.0 Len: 104 Query Start:45 Query End:148 Subject Strand: POSITIVE Subject Start: 257 Subject End: 360 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ............................................atactcaatgaaaatcaaagatcaaactaggaagctagccgtagtcagtacttgagtacggcaaggcgaagctgacgtggtttgaagagattttcgaagagtat.... Subject: smit_SMT_1809_SMT_1810|MutT/NUDIX family protein:hypothetical protein|POSITIVE:POSITIVE|[1785195,1785358]|164 HSP 1 e-value: 2.0E-33 bit: 143.0 Len: 103 Query Start:45 Query End:147 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 104 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagta..... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagta..... Subject: smit_SMT_1179_SMT_1180|aldose 1-epimerase:putative tagatose-6-phosphate aldose/ketose isomerase|NEGATIVE:NEGATIVE|[1137945,1138125]|181 HSP 1 e-value: 2.0E-33 bit: 143.0 Len: 103 Query Start:45 Query End:147 Subject Strand: POSITIVE Subject Start: 78 Subject End: 181 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagta..... ............................................atactcaatgaaaatcaaagagcaaactagaaagctagccacaggctgtacttgagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagta..... Subject: smit_SMT_1139_SMT_1140|rRNA (guanine-N1-)-methyltransferase:glycogen phosphorylase|POSITIVE:NEGATIVE|[1080744,1081405]|662 HSP 1 e-value: 2.0E-33 bit: 143.0 Len: 103 Query Start:45 Query End:147 Subject Strand: POSITIVE Subject Start: 559 Subject End: 662 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagta..... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta..... Subject: smit_SMT_1534_SMT_1535|signal peptidase I:exodeoxyribonuclease V alpha chain|POSITIVE:POSITIVE|[1517973,1518206]|234 HSP 1 e-value: 1.0E-31 bit: 137.0 Len: 104 Query Start:45 Query End:148 Subject Strand: POSITIVE Subject Start: 99 Subject End: 203 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcgaaactgacgtggtttgaatttgattttcgaagagtat.... Subject: smit_SMT_1393_SMT_1394|hypothetical protein:hypothetical protein predicted by Glimmer/Critica|POSITIVE:POSITIVE|[1369621,1370215]|595 HSP 1 e-value: 1.0E-31 bit: 137.0 Len: 104 Query Start:45 Query End:148 Subject Strand: NEGATIVE Subject Start: 152 Subject End: 256 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... ............................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagtat.... Subject: smit_SMT_1138_SMT_1139|hypothetical protein:rRNA (guanine-N1-)- methyltransferase|NEGATIVE:POSITIVE|[1079638, 1079894]|257 HSP 1 e-value: 1.0E-31 bit: 137.0 Len: 104 Query Start:45 Query End:148 Subject Strand: POSITIVE Subject Start: 75 Subject End: 179 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... ............................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagtat.... Subject: smit_SMT_662_SMT_663|A/G-specific adenine glycosylase:phosphate acetyltransferase|NEGATIVE:NEGATIVE|[573918,574105]|188 HSP 1 e-value: 5.0E-31 bit: 135.0 Len: 103 Query Start:45 Query End:147 Subject Strand: NEGATIVE Subject Start: 50 Subject End: 153 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagta..... ............................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagta..... Subject: smit_SMT_1689_SMT_1690|PTS enzyme, maltose-and glucose-specific, factor II homologue:K06148 ATP-binding cassette, subfamily C, bacterial|POSITIVE:NEGATIVE|[1673200,1673459]|260 HSP 1 e-value: 7.0E-30 bit: 131.0 Len: 106 Query Start:46 Query End:151 Subject Strand: POSITIVE Subject Start: 1 Subject End: 106 .............................................tactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataag. .............................................tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagtataag. Subject: smit_SMT_1781_SMT_1782|transcriptional regulator, xre family:hypothetical protein|POSITIVE:POSITIVE|[1759357,1759659]|303 HSP 1 e-value: 3.0E-29 bit: 129.0 Len: 108 Query Start:44 Query End:151 Subject Strand: NEGATIVE Subject Start: 173 Subject End: 281 ...........................................aatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtataag. ...........................................aatactcaatgaaaatcaaagagcaaactaggaagctagccgaaggctgtacttgagtacggcaaggtgaagctgacgtagtttgaatttgattttcgaagagtataag. Subject: smit_SMT_826_SMT_827|hypothetical protein:hypothetical protein|NEGATIVE:POSITIVE|[750113,750528]|416 HSP 1 e-value: 3.0E-29 bit: 129.0 Len: 104 Query Start:45 Query End:148 Subject Strand: NEGATIVE Subject Start: 105 Subject End: 209 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggttgtactggagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagtat.... Subject: smit_SMT_259_SMT_260|dipeptide/tripeptide permease:phage transcriptional repressor|POSITIVE:POSITIVE|[199242,199609]|368 HSP 1 e-value: 3.0E-29 bit: 129.0 Len: 104 Query Start:45 Query End:148 Subject Strand: NEGATIVE Subject Start: 104 Subject End: 208 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... ............................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgcggtttgaatttgattttcgaagagtat.... Subject: smit_SMT_890_SMT_891|K02029 polar amino acid transport system permease protein:oxidoreductase, putative|POSITIVE:POSITIVE|[837753,837989]|237 HSP 1 e-value: 1.0E-28 bit: 127.0 Len: 103 Query Start:45 Query End:147 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 104 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagta..... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagacgcaggctgtacttgagtacggcaaggtgaagctgacgtggtttgaatttgattttcgaagagta..... Subject: smit_SMT_698_SMT_699|uracil permease:K03106 signal recognition particle, subunit SRP54|POSITIVE:NEGATIVE|[609830,610030]|201 HSP 1 e-value: 1.0E-28 bit: 127.0 Len: 103 Query Start:45 Query End:147 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 104 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagta..... ............................................atactcaatgaaaatcaaagaacaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagta..... Subject: smit_SMT_1487_SMT_1488|hypothetical protein:K06147 ATP-binding cassette, subfamily B, bacterial|POSITIVE:POSITIVE|[1467137,1467296]|160 HSP 1 e-value: 4.0E-25 bit: 115.0 Len: 109 Query Start:44 Query End:152 Subject Strand: NEGATIVE Subject Start: 14 Subject End: 123 ...........................................aatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtataaga ...........................................aatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtactcgagtacggcaaggcgacgttgacgcagtttgaatttgattttcgaagagtacaaga Subject: smit_SMT_1554_SMT_1555|isoleucyl-tRNA synthetase:hypothetical protein|POSITIVE:NEGATIVE|[1539973,1540312]|340 HSP 1 e-value: 2.0E-21 bit: 103.0 Len: 104 Query Start:45 Query End:148 Subject Strand: NEGATIVE Subject Start: 149 Subject End: 252 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ............................................atactaaatgaaaatcaaaaagcaaactaggaagctagtcgcaagctgtgctgaagtacagtgaggcgacattgacgtagtttgaagagattttcgaaaagtat.... Subject: smit_SMT_1814_SMT_1815|amino acid transporter:K02035 peptide/nickel transport system substrate-binding protein|POSITIVE:NEGATIVE|[1788701,1788988]|288 HSP 1 e-value: 1.0E-16 bit: 87.7 Len: 48 Query Start:101 Query End:148 Subject Strand: POSITIVE Subject Start: 216 Subject End: 263 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtaaggcaacgctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 68 Subject End: 107 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... Subject: smit_SMT_1026_SMT_1027|sucrose phosphorylase:K02026 multiple sugar transport system permease protein|NEGATIVE:NEGATIVE|[962415,962730]|316 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 43 Query Start:42 Query End:84 Subject Strand: NEGATIVE Subject Start: 139 Subject End: 181 .........................................ttaatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... .........................................ttaatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 36 Query Start:115 Query End:150 Subject Strand: NEGATIVE Subject Start: 64 Subject End: 99 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. ..................................................................................................................gctgacgtgatttgaagagattttcgaagagtataa.. Subject: smit_SMT_1144_SMT_1145|K02026 multiple sugar transport system permease protein:maltodextrose utilization protein MalA|POSITIVE:POSITIVE|[1089205,1089465]|261 HSP 1 e-value: 2.0E-15 bit: 83.8 Len: 42 Query Start:43 Query End:84 Subject Strand: NEGATIVE Subject Start: 102 Subject End: 143 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 36 Query Start:115 Query End:150 Subject Strand: NEGATIVE Subject Start: 26 Subject End: 61 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. ..................................................................................................................gctgacgtggtttgaagaggttttcgaagagtataa.. Subject: smit_SMT_365_SMT_366|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[301808,302224]|417 HSP 1 e-value: 2.0E-15 bit: 83.8 Len: 50 Query Start:101 Query End:150 Subject Strand: NEGATIVE Subject Start: 242 Subject End: 291 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ....................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagtataa.. HSP 2 e-value: 4.0E-13 bit: 75.8 Len: 38 Query Start:43 Query End:80 Subject Strand: NEGATIVE Subject Start: 359 Subject End: 396 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagct........................................................................ ..........................................taatactcaatgaaaatcaaagagcaaactaggaagct........................................................................ Subject: smit_SMT_1356_SMT_1357|fibronectin-binding protein-like protein A:endo-beta-N- acetylglucosaminidase|POSITIVE:NEGATIVE|[1334330, 1334539]|210 HSP 1 e-value: 6.0E-15 bit: 81.8 Len: 45 Query Start:40 Query End:84 Subject Strand: POSITIVE Subject Start: 45 Subject End: 89 .......................................tattaatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... .......................................tattcatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 4.0E-13 bit: 75.8 Len: 42 Query Start:107 Query End:148 Subject Strand: POSITIVE Subject Start: 158 Subject End: 199 ..........................................................................................................aaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ..........................................................................................................aaggagacgctgacgtggtttgaagagattttcgaagagtat.... Subject: smit_SMT_451_SMT_452|thiamine-phosphate pyrophosphorylase:phosphomethylpyrimidine kinase|POSITIVE:NEGATIVE|[389708,389866]|159 HSP 1 e-value: 6.0E-15 bit: 81.8 Len: 41 Query Start:42 Query End:82 Subject Strand: POSITIVE Subject Start: 1 Subject End: 41 .........................................ttaatactcaatgaaaatcaaagagcaaactaggaagctag...................................................................... .........................................ttaatactcaatgaaaatcaaagagcaaactaggaagctag...................................................................... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 36 Query Start:115 Query End:150 Subject Strand: POSITIVE Subject Start: 83 Subject End: 118 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. ..................................................................................................................gctgacgtcgtttgaagagattttcgaagagtataa.. Subject: smit_SMT_1871_SMT_1872|modification methylase, HemK family:K03217 preprotein translocase YidC subunit|NEGATIVE:NEGATIVE|[1830592,1830972]|381 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 48 Query Start:101 Query End:148 Subject Strand: POSITIVE Subject Start: 291 Subject End: 338 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggcaaggcgaagctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 6.0E-12 bit: 71.9 Len: 38 Query Start:45 Query End:82 Subject Strand: POSITIVE Subject Start: 144 Subject End: 181 ............................................atactcaatgaaaatcaaagagcaaactaggaagctag...................................................................... ............................................atmctcaatgaaaatcaaagagcaaactaggaagctag...................................................................... Subject: smit_SMT_1604_SMT_1605|K05833 putative ABC transport system ATP-binding protein:hypothetical protein|POSITIVE:POSITIVE|[1595224,1595545]|322 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 48 Query Start:45 Query End:92 Subject Strand: NEGATIVE Subject Start: 135 Subject End: 182 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctg............................................................ ............................................atactcactgaaaatcaaagagcaaactaggaagctagccacaggctg............................................................ HSP 2 e-value: 5.0E-6 bit: 52.0 Len: 26 Query Start:123 Query End:148 Subject Strand: NEGATIVE Subject Start: 70 Subject End: 95 ..........................................................................................................................ggtttgaagagattttcgaagagtat.... ..........................................................................................................................ggtttgaagagattttcgaagagtat.... Subject: smit_SMT_1569_SMT_1570|dihydroxy-acid dehydratase:hypothetical protein|POSITIVE:NEGATIVE|[1563129,1563339]|211 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 48 Query Start:101 Query End:148 Subject Strand: NEGATIVE Subject Start: 5 Subject End: 52 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggcaaggcgacgttgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 40 Query Start:45 Query End:84 Subject Strand: NEGATIVE Subject Start: 115 Subject End: 154 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagaacaaactaggaaactagcc.................................................................... Subject: smit_SMT_775_SMT_776|alpha-acetolactate decarboxylase:hypothetical protein|NEGATIVE:POSITIVE|[686063,686341]|279 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 48 Query Start:101 Query End:148 Subject Strand: POSITIVE Subject Start: 107 Subject End: 154 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggcaaggcgaagctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 3.0E-7 bit: 56.0 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 18 Subject End: 57 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaaaagcaaactakgmagcgagcc.................................................................... Subject: smit_SMT_763_SMT_764|alpha-amylase:alanyl-tRNA synthetase|POSITIVE:NEGATIVE|[669341,669584]|244 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 86 Subject End: 125 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 48 Query Start:101 Query End:148 Subject Strand: POSITIVE Subject Start: 190 Subject End: 237 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggcaaggtgaagctgacgttgtttgaagagattttcgaagagtat.... Subject: smit_SMT_319_SMT_320|K02356 elongation factor EF-P:alcohol dehydrogenase, zinc-containing|NEGATIVE:NEGATIVE|[258955,259330]|376 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 48 Query Start:101 Query End:148 Subject Strand: POSITIVE Subject Start: 264 Subject End: 311 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtaacgtgacgctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 161 Subject End: 200 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatggaaatcaaagagcaaactaggaagcaagcc.................................................................... Subject: smit_SMT_1075_SMT_1076|hypothetical protein:2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase / dihydroneopterin aldolase|POSITIVE:NEGATIVE|[1013931,1014090]|160 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 39 Query Start:46 Query End:84 Subject Strand: POSITIVE Subject Start: 1 Subject End: 39 .............................................tactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... .............................................tactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 6.0E-12 bit: 71.9 Len: 36 Query Start:115 Query End:150 Subject Strand: POSITIVE Subject Start: 80 Subject End: 115 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. Subject: smit_SMT_455_SMT_456|cation transport ATPase:pyruvate oxidase|POSITIVE:POSITIVE|[394054,394375]|322 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 45 Query Start:43 Query End:87 Subject Strand: NEGATIVE Subject Start: 92 Subject End: 136 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagccaca................................................................. ..........................................taatactcaatgaaaatcacagagcaaactaggaagctcgccaca................................................................. HSP 2 e-value: 3.0E-7 bit: 56.0 Len: 36 Query Start:115 Query End:150 Subject Strand: NEGATIVE Subject Start: 20 Subject End: 55 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. ..................................................................................................................gctgacgtggttggaagagatttttgaagagtataa.. Subject: smit_SMT_1591_SMT_1592|DNA-entry nuclease:putative hemolysin|POSITIVE:POSITIVE|[1579529,1579794]|266 HSP 1 e-value: 6.0E-12 bit: 71.9 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 81 Subject End: 120 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagtgcaaactaggaagctagcc.................................................................... HSP 2 e-value: 9.0E-11 bit: 67.9 Len: 34 Query Start:115 Query End:148 Subject Strand: POSITIVE Subject Start: 160 Subject End: 193 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtat.... ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtat.... Subject: smit_SMT_1216_SMT_1217|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[1176030,1176255]|226 HSP 1 e-value: 6.0E-12 bit: 71.9 Len: 40 Query Start:45 Query End:84 Subject Strand: NEGATIVE Subject Start: 154 Subject End: 193 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaaactagcc.................................................................... HSP 2 e-value: 9.0E-11 bit: 67.9 Len: 46 Query Start:101 Query End:146 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 46 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagt...... ....................................................................................................tacggcaaggcgacgttgacgtggtttggagagattttcgaagagt...... Subject: smit_SMT_495_SMT_496|bacterial peptide chain release factor 2 (RF-2):superoxide dismutase, manganese-dependent|POSITIVE:POSITIVE|[430114, 430572]|459 HSP 1 e-value: 6.0E-12 bit: 71.9 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 159 Subject End: 198 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaaactagcc.................................................................... HSP 2 e-value: 6.0E-12 bit: 71.9 Len: 48 Query Start:101 Query End:148 Subject Strand: POSITIVE Subject Start: 307 Subject End: 354 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggcaaggcgacgttgacgcggtttgaagagattttcgaagagtat.... Subject: smit_SMT_235_SMT_236|hypothetical protein:ribosomal small subunit pseudouridine synthase A|POSITIVE:POSITIVE|[174452,174764]|313 HSP 1 e-value: 6.0E-12 bit: 71.9 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 14 Subject End: 53 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaaactagcc.................................................................... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 48 Query Start:101 Query End:148 Subject Strand: POSITIVE Subject Start: 206 Subject End: 253 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggcaaggcgacgttgacgcggtttgaagagatttttgaagagtat.... Inter-species Hit: Count: 146 Min: 38 Max: 152 Len: 115 Subject: NC_003028_SP_0292_SP_0293|bifunctional folate synthesis protein:hypothetical protein|POSITIVE:NEGATIVE|[271230,271378]|149 HSP 1 e-value: 9.0E-51 bit: 200.0 Len: 105 Query Start:46 Query End:150 Subject Strand: NEGATIVE Subject Start: 45 Subject End: 149 .............................................tactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. .............................................tactcaatgaaaatcaaagagcaaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. Subject: NC_008533_SPD_0260_SPD_0261|ribosomal small subunit pseudouridine synthase A:aminopeptidase C|POSITIVE:POSITIVE|[258814,259029]|216 HSP 1 e-value: 1.0E-43 bit: 176.0 Len: 109 Query Start:42 Query End:150 Subject Strand: POSITIVE Subject Start: 7 Subject End: 115 .........................................ttaatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. .........................................ttaatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaagagattttcgaagagtataa.. Subject: NC_003028_SP_2183_SP_2184|hypothetical protein:glycerol uptake facilitator protein|NEGATIVE:NEGATIVE|[2101749,2102044]|296 HSP 1 e-value: 1.0E-43 bit: 176.0 Len: 108 Query Start:43 Query End:150 Subject Strand: POSITIVE Subject Start: 187 Subject End: 295 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtataa.. ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagtataa.. Subject: NC_008533_SPD_0710_SPD_0711|septation ring formation regulator EzrA:hypothetical protein|POSITIVE:POSITIVE|[727105,727897]|793 HSP 1 e-value: 3.0E-41 bit: 168.0 Len: 109 Query Start:42 Query End:150 Subject Strand: NEGATIVE Subject Start: 133 Subject End: 241 .........................................ttaatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. .........................................ttaatactaaatgaaaatcaaaaagcaaactaagaagctagcctcaggctgtacttgagtacggtaaggcgacgctgacgtgatttgaagagattttcgaagagtataa.. Subject: NC_003028_SP_0807_SP_0809|septation ring formation regulator EzrA:hypothetical protein|POSITIVE:POSITIVE|[764244,764778]|535 HSP 1 e-value: 8.0E-39 bit: 161.0 Len: 109 Query Start:42 Query End:150 Subject Strand: NEGATIVE Subject Start: 133 Subject End: 241 .........................................ttaatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. .........................................ttaatactaaatgaaaatcaaaaagcaaactaagaagctagcctcaggctgtacttgagtacggtaaggcgacgctgacgtgatttgaaaagattttcgaagagtataa.. Subject: NC_003028_SP_1306_SP_1307|glutamate dehydrogenase:hypothetical protein|POSITIVE:NEGATIVE|[1233949,1234453]|505 HSP 1 e-value: 8.0E-36 bit: 151.0 Len: 104 Query Start:45 Query End:148 Subject Strand: POSITIVE Subject Start: 220 Subject End: 323 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ............................................atactcaatgaaaatcaaagagcaaactaggaagcgagccgcaggctgtacttgagtacggtaaagcaaagctgacgtggtttgaagagattttcaaagagtat.... Subject: NC_003028_SP_0280_SP_0281|ribosomal small subunit pseudouridine synthase A:aminopeptidase C|POSITIVE:POSITIVE|[258312,258528]|217 HSP 1 e-value: 1.0E-34 bit: 147.0 Len: 109 Query Start:42 Query End:150 Subject Strand: POSITIVE Subject Start: 7 Subject End: 116 .........................................ttaatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtataa.. .........................................ttaatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagtataa.. Subject: NC_008533_SPD_1158_SPD_1159|NADP-specific glutamate dehydrogenase:hypothetical protein|POSITIVE:NEGATIVE|[1188350,1188844]|495 HSP 1 e-value: 2.0E-33 bit: 143.0 Len: 104 Query Start:45 Query End:148 Subject Strand: POSITIVE Subject Start: 210 Subject End: 313 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ............................................atactcaatgaaaatcaaagagcaaactaggaagcgagtcgcaggctgtacttgagtacggcaaggcaaagctgacgtggtttgaagagattttcaaagagtat.... Subject: NC_003098_spr1181_spr1182|glutamate dehydrogenase:hypothetical protein|POSITIVE:NEGATIVE|[1180819,1181313]|495 HSP 1 e-value: 2.0E-33 bit: 143.0 Len: 104 Query Start:45 Query End:148 Subject Strand: POSITIVE Subject Start: 210 Subject End: 313 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ............................................atactcaatgaaaatcaaagagcaaactaggaagcgagtcgcaggctgtacttgagtacggcaaggcaaagctgacgtggtttgaagagattttcaaagagtat.... Subject: NC_003028_SP_1180_SP_1181|ribonucleotide-diphosphate reductase beta subunit:hypothetical protein|POSITIVE:NEGATIVE|[1119540,1119753]|214 HSP 1 e-value: 2.0E-33 bit: 143.0 Len: 103 Query Start:45 Query End:147 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 104 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagta..... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagta..... Subject: NC_003028_SP_1472_SP_1473|oxidoreductase, putative:hypothetical protein|POSITIVE:NEGATIVE|[1386055,1386276]|222 HSP 1 e-value: 3.0E-29 bit: 129.0 Len: 104 Query Start:45 Query End:148 Subject Strand: POSITIVE Subject Start: 116 Subject End: 220 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttaagtacggcaaggtgaagctgacgtggtttgaatttgattttcgaagagtat.... Subject: NC_008533_SPD_1551_SPD_1552|prevent-host-death family protein:hypothetical protein|NEGATIVE:NEGATIVE|[1574500,1574730]|231 HSP 1 e-value: 2.0E-27 bit: 123.0 Len: 109 Query Start:40 Query End:148 Subject Strand: POSITIVE Subject Start: 82 Subject End: 191 .......................................tattaatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... .......................................tatttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgcgatttgaatttgattttcgaagagtat.... Subject: NC_003098_spr1586_spr1587|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1567002,1567199]|198 HSP 1 e-value: 2.0E-27 bit: 123.0 Len: 109 Query Start:40 Query End:148 Subject Strand: POSITIVE Subject Start: 49 Subject End: 158 .......................................tattaatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... .......................................tatttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgcgatttgaatttgattttcgaagagtat.... Subject: NC_003028_SP_1741_SP_1742|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1645558,1645794]|237 HSP 1 e-value: 2.0E-27 bit: 123.0 Len: 109 Query Start:40 Query End:148 Subject Strand: POSITIVE Subject Start: 88 Subject End: 197 .......................................tattaatactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... .......................................tatttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgcgatttgaatttgattttcgaagagtat.... Subject: NC_008533_SPD_0546_SPD_0547|branched-chain amino acid transport system II carrier protein:hypothetical protein|POSITIVE:POSITIVE|[559539,559741]|203 HSP 1 e-value: 7.0E-27 bit: 121.0 Len: 104 Query Start:45 Query End:148 Subject Strand: NEGATIVE Subject Start: 7 Subject End: 111 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... ............................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacgacaaggcgacgttgacgcggtttgaatttgattttcgaagagtat.... Subject: NC_003098_spr0551_spr0552|Branched-chain amino acid transport system carrier protein:hypothetical protein|POSITIVE:POSITIVE|[552009,552211]|203 HSP 1 e-value: 7.0E-27 bit: 121.0 Len: 104 Query Start:45 Query End:148 Subject Strand: NEGATIVE Subject Start: 7 Subject End: 111 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... ............................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacgacaaggcgacgttgacgcggtttgaatttgattttcgaagagtat.... Subject: NC_003028_SP_1199_SP_1200|hypothetical protein:GTP-binding protein LepA|NEGATIVE:NEGATIVE|[1132042,1132583]|542 HSP 1 e-value: 3.0E-20 bit: 99.6 Len: 50 Query Start:101 Query End:150 Subject Strand: POSITIVE Subject Start: 406 Subject End: 455 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. HSP 2 e-value: 2.0E-15 bit: 83.8 Len: 42 Query Start:43 Query End:84 Subject Strand: POSITIVE Subject Start: 258 Subject End: 299 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... Subject: NC_008533_SPD_0991_SPD_0992|ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[1002301,1002645]|345 HSP 1 e-value: 1.0E-19 bit: 97.6 Len: 104 Query Start:45 Query End:148 Subject Strand: NEGATIVE Subject Start: 145 Subject End: 249 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... ............................................atactcaatgaaaattaaagtgcaaactaggaagttagccgcaggctgtacttgagtacggcaaggtgaaattgacgtggtttgaatttgattttcgaagagtat.... Subject: NC_003098_spr1014_spr1015|50S ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[994770,995114]|345 HSP 1 e-value: 1.0E-19 bit: 97.6 Len: 104 Query Start:45 Query End:148 Subject Strand: NEGATIVE Subject Start: 145 Subject End: 249 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... ............................................atactcaatgaaaattaaagtgcaaactaggaagttagccgcaggctgtacttgagtacggcaaggtgaaattgacgtggtttgaatttgattttcgaagagtat.... Subject: NC_008533_SPD_0790_SPD_0791|pyruvate kinase:hypothetical protein|POSITIVE:NEGATIVE|[809280,810395]|1116 HSP 1 e-value: 4.0E-19 bit: 95.6 Len: 48 Query Start:101 Query End:148 Subject Strand: NEGATIVE Subject Start: 102 Subject End: 149 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: NEGATIVE Subject Start: 212 Subject End: 251 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... Subject: NC_008533_SPD_0569_SPD_0570|sodium/hydrogen exchanger family protein:ribonuclease BN, putative|POSITIVE:POSITIVE|[591916,592093]|178 HSP 1 e-value: 4.0E-19 bit: 95.6 Len: 48 Query Start:101 Query End:148 Subject Strand: NEGATIVE Subject Start: 4 Subject End: 51 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 2.0E-14 bit: 79.8 Len: 48 Query Start:45 Query End:92 Subject Strand: NEGATIVE Subject Start: 106 Subject End: 153 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctg............................................................ ............................................atactcaatgaaaatcaaagagcaaactagaaagctagccgcaagctg............................................................ Subject: NC_003098_spr1924_spr1925|aspartyl-tRNA synthetase:hypothetical protein|NEGATIVE:NEGATIVE|[1908629,1908979]|351 HSP 1 e-value: 4.0E-19 bit: 95.6 Len: 48 Query Start:101 Query End:148 Subject Strand: NEGATIVE Subject Start: 122 Subject End: 169 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: NEGATIVE Subject Start: 278 Subject End: 317 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... Subject: NC_003098_spr0797_spr0798|pyruvate kinase:hypothetical protein|POSITIVE:NEGATIVE|[801749,802864]|1116 HSP 1 e-value: 4.0E-19 bit: 95.6 Len: 48 Query Start:101 Query End:148 Subject Strand: NEGATIVE Subject Start: 102 Subject End: 149 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: NEGATIVE Subject Start: 212 Subject End: 251 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... Subject: NC_003098_spr0573_spr0574|Na+/H+ antiporter:hypothetical protein|POSITIVE:POSITIVE|[584385,584547]|163 HSP 1 e-value: 4.0E-19 bit: 95.6 Len: 48 Query Start:101 Query End:148 Subject Strand: NEGATIVE Subject Start: 4 Subject End: 51 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 2.0E-14 bit: 79.8 Len: 48 Query Start:45 Query End:92 Subject Strand: NEGATIVE Subject Start: 106 Subject End: 153 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctg............................................................ ............................................atactcaatgaaaatcaaagagcaaactagaaagctagccgcaagctg............................................................ Subject: NC_003028_SP_2114_SP_2115|aspartyl-tRNA synthetase:hypothetical protein|NEGATIVE:NEGATIVE|[2029292,2029642]|351 HSP 1 e-value: 4.0E-19 bit: 95.6 Len: 48 Query Start:101 Query End:148 Subject Strand: NEGATIVE Subject Start: 122 Subject End: 169 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: NEGATIVE Subject Start: 278 Subject End: 317 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... Subject: NC_003028_SP_1696_SP_1697|hypothetical protein:ATP-dependent DNA helicase RecG|NEGATIVE:NEGATIVE|[1600719,1600952]|234 HSP 1 e-value: 4.0E-19 bit: 95.6 Len: 48 Query Start:101 Query End:148 Subject Strand: NEGATIVE Subject Start: 18 Subject End: 65 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 1.0E-12 bit: 73.8 Len: 37 Query Start:45 Query End:81 Subject Strand: NEGATIVE Subject Start: 178 Subject End: 214 ............................................atactcaatgaaaatcaaagagcaaactaggaagcta....................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagcta....................................................................... Subject: NC_003028_SP_0897_SP_0899|pyruvate kinase:hypothetical protein|POSITIVE:POSITIVE|[852843,854645]|1803 HSP 1 e-value: 4.0E-19 bit: 95.6 Len: 48 Query Start:101 Query End:148 Subject Strand: NEGATIVE Subject Start: 98 Subject End: 145 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: NEGATIVE Subject Start: 208 Subject End: 247 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... Subject: NC_003028_SP_0655_SP_0657|sodium/hydrogen exchanger family protein:ribonuclease BN, putative|POSITIVE:POSITIVE|[627719,627896]|178 HSP 1 e-value: 4.0E-19 bit: 95.6 Len: 48 Query Start:101 Query End:148 Subject Strand: NEGATIVE Subject Start: 4 Subject End: 51 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 2.0E-14 bit: 79.8 Len: 48 Query Start:45 Query End:92 Subject Strand: NEGATIVE Subject Start: 106 Subject End: 153 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctg............................................................ ............................................atactcaatgaaaatcaaagagcaaactagaaagctagccgcaagctg............................................................ Subject: NC_008533_SPD_0573_SPD_0574|peptide methionine sulfoxide reductase msrA/msrB 2:DNA-binding response regulator|POSITIVE:POSITIVE|[595585,595851]|267 HSP 1 e-value: 2.0E-18 bit: 93.7 Len: 47 Query Start:101 Query End:147 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 47 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... HSP 2 e-value: 1.0E-6 bit: 54.0 Len: 43 Query Start:45 Query End:87 Subject Strand: NEGATIVE Subject Start: 153 Subject End: 195 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccaca................................................................. ............................................atactcaataaaaatcaaaaagtaaactaggaagatagccaca................................................................. Subject: NC_003098_spr0577_spr0578|bifunctional methionine sulfoxide reductase A/B protein:Response regulator|POSITIVE:POSITIVE|[588054,588302]|249 HSP 1 e-value: 2.0E-18 bit: 93.7 Len: 47 Query Start:101 Query End:147 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 47 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... HSP 2 e-value: 1.0E-6 bit: 54.0 Len: 43 Query Start:45 Query End:87 Subject Strand: NEGATIVE Subject Start: 153 Subject End: 195 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccaca................................................................. ............................................atactcaataaaaatcaaaaagtaaactaggaagatagccaca................................................................. Subject: NC_003028_SP_0660_SP_0661|bifunctional methionine sulfoxide reductase A/B protein:DNA-binding response regulator|POSITIVE:POSITIVE|[631388,631654]|267 HSP 1 e-value: 2.0E-18 bit: 93.7 Len: 47 Query Start:101 Query End:147 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 47 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... HSP 2 e-value: 1.0E-6 bit: 54.0 Len: 43 Query Start:45 Query End:87 Subject Strand: NEGATIVE Subject Start: 153 Subject End: 195 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccaca................................................................. ............................................atactcaataaaaatcaaaaagtaaactaggaagatagccaca................................................................. Subject: NC_003028_SP_0624_SP_0626|hypothetical protein:branched-chain amino acid transport system II carrier protein|POSITIVE:POSITIVE|[592218,592819]|602 HSP 1 e-value: 2.0E-18 bit: 93.7 Len: 47 Query Start:102 Query End:148 Subject Strand: POSITIVE Subject Start: 100 Subject End: 146 .....................................................................................................acggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... .....................................................................................................acggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 9.0E-11 bit: 67.9 Len: 34 Query Start:49 Query End:82 Subject Strand: POSITIVE Subject Start: 1 Subject End: 34 ................................................tcaatgaaaatcaaagagcaaactaggaagctag...................................................................... ................................................tcaatgaaaatcaaagagcaaactaggaagctag...................................................................... Subject: NC_003098_spr1081_spr1082|hypothetical protein:GTP-binding protein LepA|NEGATIVE:NEGATIVE|[1076753,1077368]|616 HSP 1 e-value: 6.0E-18 bit: 91.7 Len: 46 Query Start:105 Query End:150 Subject Strand: POSITIVE Subject Start: 484 Subject End: 529 ........................................................................................................gtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ........................................................................................................gtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. HSP 2 e-value: 2.0E-15 bit: 83.8 Len: 42 Query Start:43 Query End:84 Subject Strand: POSITIVE Subject Start: 375 Subject End: 416 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... Subject: NC_003028_SP_1107_SP_1108|50S ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[1038201,1038545]|345 HSP 1 e-value: 2.0E-17 bit: 89.7 Len: 104 Query Start:45 Query End:148 Subject Strand: NEGATIVE Subject Start: 145 Subject End: 249 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtat.... ............................................atactcaatgaaaattaaagtgcaaactaggaagttagccgcaggctgtacttgagtacggcaaggtgaaattgacatggtttgaatttgattttcgaagagtat.... Subject: NC_008533_SPD_1193_SPD_1194|peptide methionine sulfoxide reductase msrA/msrB 1:homoserine kinase|NEGATIVE:NEGATIVE|[1222081,1222375]|295 HSP 1 e-value: 1.0E-16 bit: 87.7 Len: 48 Query Start:101 Query End:148 Subject Strand: NEGATIVE Subject Start: 32 Subject End: 79 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtaaggtgacgctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: NEGATIVE Subject Start: 188 Subject End: 227 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... Subject: NC_008533_SPD_0549_SPD_0550|lipoprotein, putative:ribosomal protein L11|POSITIVE:POSITIVE|[561971,562278]|308 HSP 1 e-value: 1.0E-16 bit: 87.7 Len: 44 Query Start:104 Query End:147 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 44 .......................................................................................................ggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... .......................................................................................................ggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... HSP 2 e-value: 9.0E-14 bit: 77.8 Len: 39 Query Start:46 Query End:84 Subject Strand: NEGATIVE Subject Start: 145 Subject End: 183 .............................................tactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... .............................................tactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... Subject: NC_003098_spr1922_spr1923|Maltose operon transcriptional repressor:hypothetical protein|POSITIVE:NEGATIVE|[1905655,1905945]|291 HSP 1 e-value: 1.0E-16 bit: 87.7 Len: 48 Query Start:101 Query End:148 Subject Strand: POSITIVE Subject Start: 238 Subject End: 285 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaaaagtat.... HSP 2 e-value: 6.0E-12 bit: 71.9 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 135 Subject End: 174 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagtgcaaactaggaagctagcc.................................................................... Subject: NC_003098_spr1217_spr1218|bifunctional methionine sulfoxide reductase A/B protein:homoserine kinase|NEGATIVE:NEGATIVE|[1214550,1214844]|295 HSP 1 e-value: 1.0E-16 bit: 87.7 Len: 48 Query Start:101 Query End:148 Subject Strand: NEGATIVE Subject Start: 32 Subject End: 79 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtaaggtgacgctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: NEGATIVE Subject Start: 188 Subject End: 227 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... Subject: NC_003098_spr0554_spr0555|hypothetical protein:50S ribosomal protein L11|POSITIVE:POSITIVE|[554441,554748]|308 HSP 1 e-value: 1.0E-16 bit: 87.7 Len: 44 Query Start:104 Query End:147 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 44 .......................................................................................................ggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... .......................................................................................................ggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... HSP 2 e-value: 9.0E-14 bit: 77.8 Len: 39 Query Start:46 Query End:84 Subject Strand: NEGATIVE Subject Start: 145 Subject End: 183 .............................................tactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... .............................................tactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... Subject: NC_003028_SP_2153_SP_2156|hypothetical protein:SPFH domain/Band 7 family|POSITIVE:NEGATIVE|[2068633,2069965]|1333 HSP 1 e-value: 1.0E-16 bit: 87.7 Len: 48 Query Start:101 Query End:148 Subject Strand: POSITIVE Subject Start: 1279 Subject End: 1326 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggcaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 9.0E-11 bit: 67.9 Len: 42 Query Start:46 Query End:87 Subject Strand: POSITIVE Subject Start: 1133 Subject End: 1174 .............................................tactcaatgaaaatcaaagagcaaactaggaagctagccaca................................................................. .............................................tactcaatgaaaatcaaagagcaaattaggaaactagccaca................................................................. Subject: NC_003028_SP_1359_SP_1360|bifunctional methionine sulfoxide reductase A/B protein:homoserine kinase|NEGATIVE:NEGATIVE|[1281932,1282225]|294 HSP 1 e-value: 1.0E-16 bit: 87.7 Len: 48 Query Start:101 Query End:148 Subject Strand: NEGATIVE Subject Start: 32 Subject End: 79 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtaaggtgacgctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: NEGATIVE Subject Start: 187 Subject End: 226 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... Subject: NC_003028_SP_0788_SP_0789|methionine--tRNA ligase:hypothetical protein|POSITIVE:POSITIVE|[743783,744247]|465 HSP 1 e-value: 1.0E-16 bit: 87.7 Len: 48 Query Start:101 Query End:148 Subject Strand: POSITIVE Subject Start: 326 Subject End: 373 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtagggcgacgctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 4.0E-16 bit: 85.7 Len: 47 Query Start:38 Query End:84 Subject Strand: POSITIVE Subject Start: 36 Subject End: 82 .....................................tttattaatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... .....................................tttatttatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... Subject: NC_003028_SP_0629_SP_0630|hypothetical protein:50S ribosomal protein L11|POSITIVE:POSITIVE|[596487,596794]|308 HSP 1 e-value: 1.0E-16 bit: 87.7 Len: 44 Query Start:104 Query End:147 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 44 .......................................................................................................ggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... .......................................................................................................ggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... HSP 2 e-value: 9.0E-14 bit: 77.8 Len: 39 Query Start:46 Query End:84 Subject Strand: NEGATIVE Subject Start: 145 Subject End: 183 .............................................tactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... .............................................tactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... Subject: NC_008533_SPD_1663_SPD_1664|alpha,alpha-phosphotrehalase:PTS system, trehalose-specific IIABC components|NEGATIVE:NEGATIVE|[1675447,1675623]|177 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 43 Query Start:45 Query End:87 Subject Strand: POSITIVE Subject Start: 66 Subject End: 108 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccaca................................................................. ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccaca................................................................. HSP 2 e-value: 4.0E-10 bit: 65.9 Len: 33 Query Start:115 Query End:147 Subject Strand: POSITIVE Subject Start: 145 Subject End: 177 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagta..... ..................................................................................................................gctgacgtggtttgaagagattttcgaagagta..... Subject: NC_008533_SPD_0099_SPD_0101|capsular polysaccharide biosynthesis protein:hydrolase, haloacid dehalogenase-like family protein|POSITIVE:NEGATIVE|[101068,101462]|395 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 51 Query Start:101 Query End:151 Subject Strand: NEGATIVE Subject Start: 64 Subject End: 114 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataag. ....................................................................................................tacggcaaggcgacgttgacgtggtttgaagagattttcgaagagtataag. HSP 2 e-value: 1.0E-12 bit: 73.8 Len: 41 Query Start:43 Query End:83 Subject Strand: NEGATIVE Subject Start: 315 Subject End: 355 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagc..................................................................... ..........................................taatactcaatgaaaatcaaagagcaaactaggaaactagc..................................................................... Subject: NC_003098_spr1698_spr1699|Dextran glucosidase:Phosphotransferase system, trehalose-specific IIBC component|NEGATIVE:NEGATIVE|[1667916,1668092]|177 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 43 Query Start:45 Query End:87 Subject Strand: POSITIVE Subject Start: 66 Subject End: 108 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccaca................................................................. ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccaca................................................................. HSP 2 e-value: 4.0E-10 bit: 65.9 Len: 33 Query Start:115 Query End:147 Subject Strand: POSITIVE Subject Start: 145 Subject End: 177 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagta..... ..................................................................................................................gctgacgtggtttgaagagattttcgaagagta..... Subject: NC_003098_spr0696_spr0697|methionine--tRNA ligase:hypothetical protein|POSITIVE:POSITIVE|[698465,698791]|327 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 47 Query Start:38 Query End:84 Subject Strand: POSITIVE Subject Start: 36 Subject End: 82 .....................................tttattaatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... .....................................tttatttatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 2.0E-14 bit: 79.8 Len: 48 Query Start:101 Query End:148 Subject Strand: POSITIVE Subject Start: 191 Subject End: 238 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtagggcgacgatgacgtggtttgaagagattttcgaagagtat.... Subject: NC_003098_spr0092_spr0093|CapD protein, required for the biosynthesis of type 1 capsular polysaccharide:Phosphoglycolate phosphatase|POSITIVE:NEGATIVE|[101068,101462]|395 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 51 Query Start:101 Query End:151 Subject Strand: NEGATIVE Subject Start: 64 Subject End: 114 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataag. ....................................................................................................tacggcaaggcgacgttgacgtggtttgaagagattttcgaagagtataag. HSP 2 e-value: 1.0E-12 bit: 73.8 Len: 41 Query Start:43 Query End:83 Subject Strand: NEGATIVE Subject Start: 315 Subject End: 355 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagc..................................................................... ..........................................taatactcaatgaaaatcaaagagcaaactaggaaactagc..................................................................... Subject: NC_003028_SP_1680_SP_1681|hypothetical protein:sugar ABC transporter, permease protein|NEGATIVE:NEGATIVE|[1579923,1580193]|271 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 103 Query Start:45 Query End:147 Subject Strand: POSITIVE Subject Start: 169 Subject End: 271 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... ............................................atactcaatgaaaattgaagaacaaactaggaagctaaccgcaggcaatacttaagtatggcaaggtgaagctgacgtagtttgaagagattttcgcagagta..... Subject: NC_003028_SP_1516_SP_1517|acetyltransferase, GNAT family:transcription elongation factor GreA|NEGATIVE:NEGATIVE|[1424331,1424807]|477 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 47 Query Start:101 Query End:147 Subject Strand: POSITIVE Subject Start: 374 Subject End: 420 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... ....................................................................................................tacggcaaggcgacgctgacgtggtttgaagagattttcgaagagta..... HSP 2 e-value: 9.0E-11 bit: 67.9 Len: 42 Query Start:43 Query End:84 Subject Strand: POSITIVE Subject Start: 89 Subject End: 130 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaataaaaatcaaagagcaaactaggaaactagcc.................................................................... Subject: NC_003028_SP_0103_SP_0104|capsular polysaccharide biosynthesis protein, putative:hydrolase, haloacid dehalogenase-like family|POSITIVE:NEGATIVE|[106519,106955]|437 HSP 1 e-value: 4.0E-16 bit: 85.7 Len: 51 Query Start:101 Query End:151 Subject Strand: NEGATIVE Subject Start: 64 Subject End: 114 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataag. ....................................................................................................tacggcaaggcgacgttgacgtggtttgaagagattttcgaagagtataag. HSP 2 e-value: 1.0E-12 bit: 73.8 Len: 41 Query Start:43 Query End:83 Subject Strand: NEGATIVE Subject Start: 357 Subject End: 397 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagc..................................................................... ..........................................taatactcaatgaaaatcaaagagcaaactaggaaactagc..................................................................... Subject: NC_008533_SPD_0556_SPD_0558|hypothetical protein:cell wall-associated serine protease PrtA|POSITIVE:POSITIVE|[568719,569947]|1229 HSP 1 e-value: 2.0E-15 bit: 83.8 Len: 50 Query Start:102 Query End:151 Subject Strand: NEGATIVE Subject Start: 807 Subject End: 856 .....................................................................................................acggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataag. .....................................................................................................acggcaaggcgacgttgacgtggtttgaagagattttcgaagagtataag. HSP 2 e-value: 6.0E-12 bit: 71.9 Len: 44 Query Start:41 Query End:84 Subject Strand: NEGATIVE Subject Start: 966 Subject End: 1009 ........................................attaatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ........................................attagtactcaatgaaaatcaaagagcaaactaggaaactagcc.................................................................... Subject: NC_008533_SPD_0486_SPD_0487|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[494216,494515]|300 HSP 1 e-value: 2.0E-15 bit: 83.8 Len: 42 Query Start:43 Query End:84 Subject Strand: NEGATIVE Subject Start: 250 Subject End: 291 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 6.0E-12 bit: 71.9 Len: 36 Query Start:115 Query End:150 Subject Strand: NEGATIVE Subject Start: 93 Subject End: 128 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. Subject: NC_003098_spr0560_spr0561|hypothetical protein:Cell wall-associated serine proteinase precursor PrtA|POSITIVE:POSITIVE|[561687,562417]|731 HSP 1 e-value: 2.0E-15 bit: 83.8 Len: 50 Query Start:102 Query End:151 Subject Strand: NEGATIVE Subject Start: 309 Subject End: 358 .....................................................................................................acggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataag. .....................................................................................................acggcaaggcgacgttgacgtggtttgaagagattttcgaagagtataag. HSP 2 e-value: 6.0E-12 bit: 71.9 Len: 44 Query Start:41 Query End:84 Subject Strand: NEGATIVE Subject Start: 468 Subject End: 511 ........................................attaatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ........................................attagtactcaatgaaaatcaaagagcaaactaggaaactagcc.................................................................... Subject: NC_003098_spr0484_spr0485|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[486549,486985]|437 HSP 1 e-value: 2.0E-15 bit: 83.8 Len: 42 Query Start:43 Query End:84 Subject Strand: NEGATIVE Subject Start: 387 Subject End: 428 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 6.0E-12 bit: 71.9 Len: 36 Query Start:115 Query End:150 Subject Strand: NEGATIVE Subject Start: 230 Subject End: 265 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. Subject: NC_003028_SP_0640_SP_0641|hypothetical protein:serine protease, subtilase family|POSITIVE:POSITIVE|[603164,603894]|731 HSP 1 e-value: 2.0E-15 bit: 83.8 Len: 50 Query Start:102 Query End:151 Subject Strand: NEGATIVE Subject Start: 309 Subject End: 358 .....................................................................................................acggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataag. .....................................................................................................acggcaaggcgacgttgacgtggtttgaagagattttcgaagagtataag. HSP 2 e-value: 6.0E-12 bit: 71.9 Len: 44 Query Start:41 Query End:84 Subject Strand: NEGATIVE Subject Start: 468 Subject End: 511 ........................................attaatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ........................................attagtactcaatgaaaatcaaagagcaaactaggaaactagcc.................................................................... Subject: NC_003028_SP_0560_SP_0561|hypothetical protein:hypothetical protein|NEGATIVE:POSITIVE|[528030,528290]|261 HSP 1 e-value: 2.0E-15 bit: 83.8 Len: 42 Query Start:43 Query End:84 Subject Strand: NEGATIVE Subject Start: 211 Subject End: 252 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 6.0E-12 bit: 71.9 Len: 36 Query Start:115 Query End:150 Subject Strand: NEGATIVE Subject Start: 54 Subject End: 89 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. Subject: NC_003028_SP_0482_SP_0483|hypothetical protein:ABC transporter, ATP-binding protein|POSITIVE:POSITIVE|[463540,463904]|365 HSP 1 e-value: 2.0E-15 bit: 83.8 Len: 50 Query Start:101 Query End:150 Subject Strand: POSITIVE Subject Start: 148 Subject End: 197 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ....................................................................................................tacggcaaggcgaagctgacgtggtttgaagagattttcgaagagtataa.. HSP 2 e-value: 9.0E-14 bit: 77.8 Len: 39 Query Start:46 Query End:84 Subject Strand: POSITIVE Subject Start: 1 Subject End: 39 .............................................tactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... .............................................tactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... Subject: NC_008533_SPD_1408_SPD_1409|hypothetical protein:sugar ABC transporter, ATP-binding protein|NEGATIVE:NEGATIVE|[1427612,1428111]|500 HSP 1 e-value: 6.0E-15 bit: 81.8 Len: 49 Query Start:100 Query End:148 Subject Strand: POSITIVE Subject Start: 303 Subject End: 351 ...................................................................................................gtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ...................................................................................................gtacggcaaggcgacgttgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 9.0E-11 bit: 67.9 Len: 42 Query Start:43 Query End:84 Subject Strand: POSITIVE Subject Start: 199 Subject End: 240 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaatggaaatcaaagagcaaactaggaaactagcc.................................................................... Subject: NC_008533_SPD_0781_SPD_0782|hypothetical protein:type I restriction-modification system, M subunit, putative|POSITIVE:POSITIVE|[793779,794285]|507 HSP 1 e-value: 6.0E-15 bit: 81.8 Len: 45 Query Start:40 Query End:84 Subject Strand: POSITIVE Subject Start: 248 Subject End: 292 .......................................tattaatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... .......................................tattaatattcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 4.0E-13 bit: 75.8 Len: 50 Query Start:101 Query End:150 Subject Strand: POSITIVE Subject Start: 357 Subject End: 406 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ....................................................................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtataa.. Subject: NC_008533_SPD_0527_SPD_0528|oxidoreductase, putative:amino acid ABC transporter, permease protein|NEGATIVE:NEGATIVE|[539375,539631]|257 HSP 1 e-value: 6.0E-15 bit: 81.8 Len: 45 Query Start:45 Query End:89 Subject Strand: POSITIVE Subject Start: 146 Subject End: 190 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaag............................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaag............................................................... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 32 Query Start:115 Query End:146 Subject Strand: POSITIVE Subject Start: 225 Subject End: 256 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagt...... ..................................................................................................................gctgacgtggtttgaagagattttcgaagagt...... Subject: NC_008533_SPD_0409_SPD_0410|threonine dehydratase:hypothetical protein|POSITIVE:POSITIVE|[410381,411114]|734 HSP 1 e-value: 6.0E-15 bit: 81.8 Len: 45 Query Start:45 Query End:89 Subject Strand: NEGATIVE Subject Start: 141 Subject End: 185 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaag............................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaag............................................................... HSP 2 e-value: 2.0E-8 bit: 60.0 Len: 30 Query Start:119 Query End:148 Subject Strand: NEGATIVE Subject Start: 73 Subject End: 102 ......................................................................................................................acgtggtttgaagagattttcgaagagtat.... ......................................................................................................................acgtggtttgaagagattttcgaagagtat.... Subject: NC_003098_spr1436_spr1437|hypothetical protein:ABC transporter ATP-binding protein - multiple sugar transport|NEGATIVE:NEGATIVE|[1420081,1420580]|500 HSP 1 e-value: 6.0E-15 bit: 81.8 Len: 49 Query Start:100 Query End:148 Subject Strand: POSITIVE Subject Start: 303 Subject End: 351 ...................................................................................................gtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ...................................................................................................gtacggcaaggcgacgttgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 9.0E-11 bit: 67.9 Len: 42 Query Start:43 Query End:84 Subject Strand: POSITIVE Subject Start: 199 Subject End: 240 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaatggaaatcaaagagcaaactaggaaactagcc.................................................................... Subject: NC_003098_spr0789_spr0790|hypothetical protein:Type I restriction modification enzyme methylase subunit|POSITIVE:POSITIVE|[786248,786754]|507 HSP 1 e-value: 6.0E-15 bit: 81.8 Len: 45 Query Start:40 Query End:84 Subject Strand: POSITIVE Subject Start: 248 Subject End: 292 .......................................tattaatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... .......................................tattaatattcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 4.0E-13 bit: 75.8 Len: 50 Query Start:101 Query End:150 Subject Strand: POSITIVE Subject Start: 357 Subject End: 406 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ....................................................................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtataa.. Subject: NC_003098_spr0531_spr0532|hypothetical protein:ABC transporter membrane-spanning permease - glutamine transport|NEGATIVE:NEGATIVE|[531857,532101]|245 HSP 1 e-value: 6.0E-15 bit: 81.8 Len: 45 Query Start:45 Query End:89 Subject Strand: POSITIVE Subject Start: 134 Subject End: 178 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaag............................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaag............................................................... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 32 Query Start:115 Query End:146 Subject Strand: POSITIVE Subject Start: 213 Subject End: 244 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagt...... ..................................................................................................................gctgacgtggtttgaagagattttcgaagagt...... Subject: NC_003098_spr0406_spr0407|threonine dehydratase:hypothetical protein|POSITIVE:POSITIVE|[402852,403585]|734 HSP 1 e-value: 6.0E-15 bit: 81.8 Len: 45 Query Start:45 Query End:89 Subject Strand: NEGATIVE Subject Start: 141 Subject End: 185 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaag............................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaag............................................................... HSP 2 e-value: 2.0E-8 bit: 60.0 Len: 30 Query Start:119 Query End:148 Subject Strand: NEGATIVE Subject Start: 73 Subject End: 102 ......................................................................................................................acgtggtttgaagagattttcgaagagtat.... ......................................................................................................................acgtggtttgaagagattttcgaagagtat.... Subject: NC_003028_SP_1579_SP_1580|hypothetical protein:sugar ABC transporter, ATP-binding protein|NEGATIVE:NEGATIVE|[1484730,1485134]|405 HSP 1 e-value: 6.0E-15 bit: 81.8 Len: 49 Query Start:100 Query End:148 Subject Strand: POSITIVE Subject Start: 208 Subject End: 256 ...................................................................................................gtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ...................................................................................................gtacggcaaggcgacgttgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 9.0E-11 bit: 67.9 Len: 42 Query Start:43 Query End:84 Subject Strand: POSITIVE Subject Start: 104 Subject End: 145 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaatggaaatcaaagagcaaactaggaaactagcc.................................................................... Subject: NC_003028_SP_0885_SP_0886|hypothetical protein:type I restriction-modification system, M subunit, putative|POSITIVE:POSITIVE|[834569,835074]|506 HSP 1 e-value: 6.0E-15 bit: 81.8 Len: 45 Query Start:40 Query End:84 Subject Strand: POSITIVE Subject Start: 248 Subject End: 292 .......................................tattaatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... .......................................tattaatattcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 4.0E-13 bit: 75.8 Len: 50 Query Start:101 Query End:150 Subject Strand: POSITIVE Subject Start: 356 Subject End: 405 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ....................................................................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtataa.. Subject: NC_003028_SP_0606_SP_0607|oxidoreductase, putative:amino acid ABC transporter, permease protein|NEGATIVE:NEGATIVE|[574009,574253]|245 HSP 1 e-value: 6.0E-15 bit: 81.8 Len: 45 Query Start:45 Query End:89 Subject Strand: POSITIVE Subject Start: 134 Subject End: 178 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaag............................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaag............................................................... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 32 Query Start:115 Query End:146 Subject Strand: POSITIVE Subject Start: 213 Subject End: 244 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagt...... ..................................................................................................................gctgacgtggtttgaagagattttcgaagagt...... Subject: NC_003028_SP_0450_SP_0451|threonine dehydratase:hypothetical protein|POSITIVE:POSITIVE|[422944,423677]|734 HSP 1 e-value: 6.0E-15 bit: 81.8 Len: 45 Query Start:45 Query End:89 Subject Strand: NEGATIVE Subject Start: 141 Subject End: 185 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaag............................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaag............................................................... HSP 2 e-value: 2.0E-8 bit: 60.0 Len: 30 Query Start:119 Query End:148 Subject Strand: NEGATIVE Subject Start: 73 Subject End: 102 ......................................................................................................................acgtggtttgaagagattttcgaagagtat.... ......................................................................................................................acgtggtttgaagagattttcgaagagtat.... Subject: NC_003028_SP_0095_SP_0096|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[97857,98130]|274 HSP 1 e-value: 6.0E-15 bit: 81.8 Len: 41 Query Start:43 Query End:83 Subject Strand: POSITIVE Subject Start: 51 Subject End: 91 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagc..................................................................... ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagc..................................................................... HSP 2 e-value: 4.0E-13 bit: 75.8 Len: 50 Query Start:101 Query End:150 Subject Strand: POSITIVE Subject Start: 157 Subject End: 206 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ....................................................................................................tacggcaaggcgaagctgacgcggtttgaagagattttcgaagagtataa.. Subject: NC_008533_SPD_1931_SPD_1932|hypothetical protein:maltodextrin phosphorylase|POSITIVE:NEGATIVE|[1902224,1903267]|1044 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 933 Subject End: 972 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 4.0E-10 bit: 65.9 Len: 33 Query Start:115 Query End:147 Subject Strand: POSITIVE Subject Start: 1012 Subject End: 1044 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagta..... ..................................................................................................................gctgacgtggtttgaagagattttcgaagagta..... Subject: NC_008533_SPD_1626_SPD_1628|exodeoxyribonuclease III:xanthine phosphoribosyltransferase|POSITIVE:POSITIVE|[1641580, 1642850]|1271 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 48 Query Start:101 Query End:148 Subject Strand: NEGATIVE Subject Start: 495 Subject End: 542 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtaaggcgacgttgacgtggcttgaagagattttcgaagagtat.... HSP 2 e-value: 6.0E-12 bit: 71.9 Len: 44 Query Start:45 Query End:88 Subject Strand: NEGATIVE Subject Start: 600 Subject End: 643 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaa................................................................ ............................................atactaaatgaaaatcaaagagcaaactaggaagctatccacaa................................................................ Subject: NC_008533_SPD_1201_SPD_1202|phosphotransferase LicD3:Psr protein|NEGATIVE:NEGATIVE|[1231002,1231279]|278 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 52 Query Start:101 Query End:152 Subject Strand: NEGATIVE Subject Start: 119 Subject End: 170 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga ....................................................................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtataaga HSP 2 e-value: 4.0E-13 bit: 75.8 Len: 42 Query Start:43 Query End:84 Subject Strand: NEGATIVE Subject Start: 235 Subject End: 276 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaatgaaaatcaaagtgcaaactaggaagctagcc.................................................................... Subject: NC_008533_SPD_1086_SPD_1087|A/G-specific adenine glycosylase:formate--tetrahydrofolate ligase|NEGATIVE:NEGATIVE|[1117070,1117397]|328 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 90 Subject End: 129 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 2.0E-8 bit: 60.0 Len: 50 Query Start:101 Query End:150 Subject Strand: POSITIVE Subject Start: 195 Subject End: 244 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ....................................................................................................tacggcaaggtgaagctgacgtagtttgaaaagattttcgaagagtataa.. Subject: NC_008533_SPD_0729_SPD_0730|hemolysin-related protein:purine nucleoside phosphorylase|POSITIVE:POSITIVE|[743379,744035]|657 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 44 Query Start:41 Query End:84 Subject Strand: POSITIVE Subject Start: 95 Subject End: 138 ........................................attaatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ........................................attaatactcaatgaaaatcaaagagcaaactaggaaactagcc.................................................................... HSP 2 e-value: 2.0E-14 bit: 79.8 Len: 44 Query Start:107 Query End:150 Subject Strand: POSITIVE Subject Start: 207 Subject End: 250 ..........................................................................................................aaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ..........................................................................................................aaggcgacgttgacgtggtttgaagagattttcgaagagtataa.. Subject: NC_008533_SPD_0539_SPD_0540|Ser/Thr protein phosphatase family protein:amino acid ABC transporter, amino acid-binding protein, putative|POSITIVE:NEGATIVE|[553789,553969]|181 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 70 Subject End: 109 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 32 Query Start:115 Query End:146 Subject Strand: POSITIVE Subject Start: 149 Subject End: 180 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagt...... ..................................................................................................................gctgacgtggtttgaagagattttcgaagagt...... Subject: NC_008533_SPD_0353_SPD_0355|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[356986,357757]|772 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: NEGATIVE Subject Start: 319 Subject End: 358 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 9.0E-11 bit: 67.9 Len: 34 Query Start:115 Query End:148 Subject Strand: NEGATIVE Subject Start: 246 Subject End: 279 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtat.... ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtat.... Subject: NC_008533_SPD_0077_SPD_0078|potassium uptake protein, Trk family protein:glycosyl transferase, group 2 family protein|POSITIVE:POSITIVE|[78745,79053]|309 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 52 Query Start:101 Query End:152 Subject Strand: POSITIVE Subject Start: 230 Subject End: 281 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga ....................................................................................................tacggcaaggcgacgttgacgcggtttgaagagattttcgaagagtataaga HSP 2 e-value: 4.0E-10 bit: 65.9 Len: 41 Query Start:43 Query End:83 Subject Strand: POSITIVE Subject Start: 126 Subject End: 166 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagc..................................................................... ..........................................taatactcaatgaaaatcaaagatcaaactaggaaactagc..................................................................... Subject: NC_003098_spr1915_spr1916|hypothetical protein:Maltodextrin phosphorylase|POSITIVE:NEGATIVE|[1894692,1895735]|1044 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 933 Subject End: 972 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 4.0E-10 bit: 65.9 Len: 33 Query Start:115 Query End:147 Subject Strand: POSITIVE Subject Start: 1012 Subject End: 1044 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagta..... ..................................................................................................................gctgacgtggtttgaagagattttcgaagagta..... Subject: NC_003098_spr1709_spr1710|Dextransucrase (sucrose 6-glucosyltransferase):ABC transporter membrane spanning permease - multiple sugars|NEGATIVE:NEGATIVE|[1682434,1682790]|357 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 52 Query Start:101 Query End:152 Subject Strand: NEGATIVE Subject Start: 204 Subject End: 255 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga ....................................................................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtataaga HSP 2 e-value: 9.0E-14 bit: 77.8 Len: 39 Query Start:46 Query End:84 Subject Strand: NEGATIVE Subject Start: 319 Subject End: 357 .............................................tactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... .............................................tactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... Subject: NC_003098_spr1661_spr1662|hypothetical protein:xanthine phosphoribosyltransferase|POSITIVE:POSITIVE|[1634443, 1635319]|877 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 48 Query Start:101 Query End:148 Subject Strand: NEGATIVE Subject Start: 101 Subject End: 148 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtaaggcgacgttgacgtggcttgaagagattttcgaagagtat.... HSP 2 e-value: 6.0E-12 bit: 71.9 Len: 44 Query Start:45 Query End:88 Subject Strand: NEGATIVE Subject Start: 206 Subject End: 249 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaa................................................................ ............................................atactaaatgaaaatcaaagagcaaactaggaagctatccacaa................................................................ Subject: NC_003098_spr1368_spr1369|hypothetical protein:transcription elongation factor GreA|NEGATIVE:NEGATIVE|[1350306,1350773]|468 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 44 Query Start:101 Query End:144 Subject Strand: POSITIVE Subject Start: 365 Subject End: 408 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaaga........ ....................................................................................................tacggcaaggcgacgctgacgtggtttgaagagattttcgaaga........ HSP 2 e-value: 9.0E-11 bit: 67.9 Len: 42 Query Start:43 Query End:84 Subject Strand: POSITIVE Subject Start: 35 Subject End: 76 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaataaaaatcaaagagcaaactaggaaactagcc.................................................................... Subject: NC_003098_spr1225_spr1226|LicD1 paralog:hypothetical protein|NEGATIVE:NEGATIVE|[1223471,1223748]|278 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 52 Query Start:101 Query End:152 Subject Strand: NEGATIVE Subject Start: 119 Subject End: 170 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga ....................................................................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtataaga HSP 2 e-value: 4.0E-13 bit: 75.8 Len: 42 Query Start:43 Query End:84 Subject Strand: NEGATIVE Subject Start: 235 Subject End: 276 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaatgaaaatcaaagtgcaaactaggaagctagcc.................................................................... Subject: NC_003098_spr1108_spr1109|Similar to A/G-specific adenine glycosylase:Formate--tetrahydrofolate ligase|NEGATIVE:NEGATIVE|[1109539,1109866]|328 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 90 Subject End: 129 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 2.0E-8 bit: 60.0 Len: 50 Query Start:101 Query End:150 Subject Strand: POSITIVE Subject Start: 195 Subject End: 244 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ....................................................................................................tacggcaaggtgaagctgacgtagtttgaaaagattttcgaagagtataa.. Subject: NC_003098_spr0737_spr0738|Conserved hypothetical protein, truncation:Purine nucleoside phosphorylase (inosine phosphorylase)|POSITIVE:POSITIVE|[735848,736504]|657 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 44 Query Start:41 Query End:84 Subject Strand: POSITIVE Subject Start: 95 Subject End: 138 ........................................attaatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ........................................attaatactcaatgaaaatcaaagagcaaactaggaaactagcc.................................................................... HSP 2 e-value: 2.0E-14 bit: 79.8 Len: 44 Query Start:107 Query End:150 Subject Strand: POSITIVE Subject Start: 207 Subject End: 250 ..........................................................................................................aaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ..........................................................................................................aaggcgacgttgacgtggtttgaagagattttcgaagagtataa.. Subject: NC_003098_spr0690_spr0691|hypothetical protein:Biotin synthase|POSITIVE:NEGATIVE|[690651,690853]|203 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: NEGATIVE Subject Start: 111 Subject End: 150 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 1.0E-6 bit: 54.0 Len: 47 Query Start:101 Query End:147 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 47 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... ....................................................................................................tacggcaaggcaaagctgatgcggtttgaagagattttcgaagagta..... Subject: NC_003098_spr0544_spr0545|hypothetical protein:ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor precursor|POSITIVE:NEGATIVE|[546259,546439]|181 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 70 Subject End: 109 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 32 Query Start:115 Query End:146 Subject Strand: POSITIVE Subject Start: 149 Subject End: 180 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagt...... ..................................................................................................................gctgacgtggtttgaagagattttcgaagagt...... Subject: NC_003098_spr0071_spr0072|Trk transporter NAD+ binding protein - K+ transport:hypothetical protein|POSITIVE:POSITIVE|[78745,79053]|309 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 52 Query Start:101 Query End:152 Subject Strand: POSITIVE Subject Start: 230 Subject End: 281 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga ....................................................................................................tacggcaaggcgacgttgacgcggtttgaagagattttcgaagagtataaga HSP 2 e-value: 4.0E-10 bit: 65.9 Len: 41 Query Start:43 Query End:83 Subject Strand: POSITIVE Subject Start: 126 Subject End: 166 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagc..................................................................... ..........................................taatactcaatgaaaatcaaagatcaaactaggaaactagc..................................................................... Subject: NC_003028_SP_2105_SP_2106|hypothetical protein:glycogen phosphorylase family protein|POSITIVE:NEGATIVE|[2015357,2016398]|1042 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 932 Subject End: 971 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 4.0E-10 bit: 65.9 Len: 33 Query Start:115 Query End:147 Subject Strand: POSITIVE Subject Start: 1010 Subject End: 1042 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagta..... ..................................................................................................................gctgacgtggtttgaagagattttcgaagagta..... Subject: NC_003028_SP_1894_SP_1895|sucrose phosphorylase:sugar ABC transporter, permease protein|NEGATIVE:NEGATIVE|[1801040,1801396]|357 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 52 Query Start:101 Query End:152 Subject Strand: NEGATIVE Subject Start: 204 Subject End: 255 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga ....................................................................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtataaga HSP 2 e-value: 9.0E-14 bit: 77.8 Len: 39 Query Start:46 Query End:84 Subject Strand: NEGATIVE Subject Start: 319 Subject End: 357 .............................................tactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... .............................................tactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... Subject: NC_003028_SP_1845_SP_1847|exodeoxyribonuclease:xanthine phosphoribosyltransferase|POSITIVE:POSITIVE|[1754015, 1755276]|1262 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 48 Query Start:101 Query End:148 Subject Strand: NEGATIVE Subject Start: 495 Subject End: 542 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggtaaggcgacgttgacgtggcttgaagagattttcgaagagtat.... HSP 2 e-value: 6.0E-12 bit: 71.9 Len: 44 Query Start:45 Query End:88 Subject Strand: NEGATIVE Subject Start: 600 Subject End: 643 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaa................................................................ ............................................atactaaatgaaaatcaaagagcaaactaggaagctatccacaa................................................................ Subject: NC_003028_SP_1717_SP_1718|ABC transporter, ATP-binding protein:hypothetical protein|NEGATIVE:NEGATIVE|[1621815,1622204]|390 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 116 Subject End: 155 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 2.0E-14 bit: 79.8 Len: 48 Query Start:101 Query End:148 Subject Strand: POSITIVE Subject Start: 264 Subject End: 311 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggcaaggcgaagctgacgtggtttgaagagattttcgaagagtat.... Subject: NC_003028_SP_1706_SP_1707|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1611668,1611851]|184 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 44 Query Start:107 Query End:150 Subject Strand: POSITIVE Subject Start: 140 Subject End: 183 ..........................................................................................................aaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ..........................................................................................................aaggcgacgttgacgtggtttgaagagattttcgaagagtataa.. HSP 2 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:43 Query End:89 Subject Strand: POSITIVE Subject Start: 30 Subject End: 76 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagccacaag............................................................... ..........................................taatactcaatgaaaatcaaagagcaaactaggaaactagccgcaag............................................................... Subject: NC_003028_SP_1600_SP_1601|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1504655,1504893]|239 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 127 Subject End: 166 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 32 Query Start:116 Query End:147 Subject Strand: POSITIVE Subject Start: 208 Subject End: 239 ...................................................................................................................ctgacgtggtttgaagagattttcgaagagta..... ...................................................................................................................ctgacgtggtttgaagagattttcgaagagta..... Subject: NC_003028_SP_1367_SP_1368|licD3 protein:psr protein|NEGATIVE:NEGATIVE|[1290910,1291187]|278 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 52 Query Start:101 Query End:152 Subject Strand: NEGATIVE Subject Start: 119 Subject End: 170 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga ....................................................................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtataaga HSP 2 e-value: 4.0E-13 bit: 75.8 Len: 42 Query Start:43 Query End:84 Subject Strand: NEGATIVE Subject Start: 235 Subject End: 276 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaatgaaaatcaaagtgcaaactaggaagctagcc.................................................................... Subject: NC_003028_SP_1228_SP_1229|A/G-specific adenine glycosylase:formate--tetrahydrofolate ligase|NEGATIVE:NEGATIVE|[1161361,1161717]|357 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 120 Subject End: 159 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 9.0E-11 bit: 67.9 Len: 50 Query Start:101 Query End:150 Subject Strand: POSITIVE Subject Start: 224 Subject End: 273 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ....................................................................................................tacggcaaggtgaagctgacgtagtttgaagagattttcgaagagtataa.. Subject: NC_003028_SP_0834_SP_0835|hemolysin-related protein:purine nucleoside phosphorylase, family 1|POSITIVE:POSITIVE|[783000,783652]|653 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 44 Query Start:107 Query End:150 Subject Strand: POSITIVE Subject Start: 207 Subject End: 250 ..........................................................................................................aaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ..........................................................................................................aaggcgacgttgacgtggtttgaagagattttcgaagagtataa.. HSP 2 e-value: 6.0E-12 bit: 71.9 Len: 44 Query Start:41 Query End:84 Subject Strand: POSITIVE Subject Start: 95 Subject End: 138 ........................................attaatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ........................................attaatactcaatgaaaatcaaagagcaaactaagaaactagcc.................................................................... Subject: NC_003028_SP_0782_SP_0783|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[735967,736171]|205 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: NEGATIVE Subject Start: 111 Subject End: 150 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 6.0E-9 bit: 61.9 Len: 47 Query Start:101 Query End:147 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 47 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... ....................................................................................................tacggcaaggcaaagctgacgcggtttgaagagattttcgaagagta..... Subject: NC_003028_SP_0619_SP_0620|hypothetical protein:amino acid ABC transporter, amino acid-binding protein, putative|POSITIVE:NEGATIVE|[588415,588595]|181 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 70 Subject End: 109 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 32 Query Start:115 Query End:146 Subject Strand: POSITIVE Subject Start: 149 Subject End: 180 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagt...... ..................................................................................................................gctgacgtggtttgaagagattttcgaagagt...... Subject: NC_003028_SP_0387_SP_0389|DNA-binding response regulator:hypothetical protein|POSITIVE:POSITIVE|[367533,368450]|918 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: NEGATIVE Subject Start: 465 Subject End: 504 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 9.0E-11 bit: 67.9 Len: 34 Query Start:115 Query End:148 Subject Strand: NEGATIVE Subject Start: 392 Subject End: 425 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtat.... ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtat.... Subject: NC_003028_SP_0120_SP_0121|glucose-inhibited division protein A:metallo-beta-lactamase superfamily protein|POSITIVE:NEGATIVE|[124699,125050]|352 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 40 Query Start:45 Query End:84 Subject Strand: NEGATIVE Subject Start: 249 Subject End: 288 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... HSP 2 e-value: 6.0E-12 bit: 71.9 Len: 48 Query Start:101 Query End:148 Subject Strand: NEGATIVE Subject Start: 138 Subject End: 185 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggcaaggcgacgttgacgcggtttgaagagattttcgaagagtat.... Subject: NC_003028_SP_0080_SP_0082|hypothetical protein:cell wall surface anchor family protein|POSITIVE:POSITIVE|[84985,86297]|1313 HSP 1 e-value: 2.0E-14 bit: 79.8 Len: 52 Query Start:101 Query End:152 Subject Strand: POSITIVE Subject Start: 102 Subject End: 153 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga ....................................................................................................tacggcaaggcgacgttgacgcggtttgaagagattttcgaagagtataaga HSP 2 e-value: 2.0E-8 bit: 60.0 Len: 38 Query Start:46 Query End:83 Subject Strand: POSITIVE Subject Start: 1 Subject End: 38 .............................................tactcaatgaaaatcaaagagcaaactaggaagctagc..................................................................... .............................................tactcaatgaaaatcaaagatcaaactaggaaactagc..................................................................... Subject: NC_008533_SPD_1968_SPD_1969|hypothetical protein:glycosyl hydrolase-related protein|NEGATIVE:NEGATIVE|[1937077,1937401]|325 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 39 Query Start:45 Query End:83 Subject Strand: POSITIVE Subject Start: 213 Subject End: 251 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagc..................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagc..................................................................... HSP 2 e-value: 4.0E-10 bit: 65.9 Len: 33 Query Start:115 Query End:147 Subject Strand: POSITIVE Subject Start: 293 Subject End: 325 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagta..... ..................................................................................................................gctgacgtggtttgaagagattttcgaagagta..... Subject: NC_008533_SPD_1652_SPD_1653|iron-compound ABC transporter, iron-compound-binding protein:conserved hypothetical protein TIGR00278|POSITIVE:NEGATIVE|[1667285,1667508]|224 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:42 Query End:84 Subject Strand: POSITIVE Subject Start: 18 Subject End: 60 .........................................ttaatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... .........................................ttaatactcaatgaaaatcaaagagcaaactaggaaactagcc.................................................................... HSP 2 e-value: 3.0E-7 bit: 56.0 Len: 28 Query Start:123 Query End:150 Subject Strand: POSITIVE Subject Start: 109 Subject End: 136 ..........................................................................................................................ggtttgaagagattttcgaagagtataa.. ..........................................................................................................................ggtttgaagagattttcgaagagtataa.. Subject: NC_008533_SPD_1528_SPD_1530|ABC transporter, ATP-binding protein:hypothetical protein|NEGATIVE:POSITIVE|[1550754,1552061]|1308 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:102 Query End:148 Subject Strand: POSITIVE Subject Start: 264 Subject End: 310 .....................................................................................................acggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... .....................................................................................................acggcaaggcgaagctgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 115 Subject End: 154 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaagcaaagagcgaactaggaagctagcc.................................................................... Subject: NC_008533_SPD_1121_SPD_1122|hypothetical protein:DNA processing protein DprA, putative|NEGATIVE:NEGATIVE|[1152536,1153424]|889 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:45 Query End:87 Subject Strand: POSITIVE Subject Start: 577 Subject End: 619 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccaca................................................................. ............................................atactcaatgaaaatcaaagcgcaaactaggaagctagccaca................................................................. HSP 2 e-value: 2.0E-8 bit: 60.0 Len: 34 Query Start:115 Query End:148 Subject Strand: POSITIVE Subject Start: 702 Subject End: 735 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtat.... ..................................................................................................................gctgacgtagtttgaagagattttcgaagagtat.... HSP 3 e-value: 5.0E-6 bit: 52.0 Len: 34 Query Start:115 Query End:148 Subject Strand: POSITIVE Subject Start: 219 Subject End: 252 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtat.... ..................................................................................................................gctgacgtagtttgaagagattttcgaaaagtat.... Subject: NC_003098_spr1948_spr1949|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1929575,1929899]|325 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 39 Query Start:45 Query End:83 Subject Strand: POSITIVE Subject Start: 213 Subject End: 251 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagc..................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagc..................................................................... HSP 2 e-value: 4.0E-10 bit: 65.9 Len: 33 Query Start:115 Query End:147 Subject Strand: POSITIVE Subject Start: 293 Subject End: 325 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagta..... ..................................................................................................................gctgacgtggtttgaagagattttcgaagagta..... Subject: NC_003098_spr1687_spr1688|ABC transporter substrate-binding protein - ferric iron transport:hypothetical protein|POSITIVE:NEGATIVE|[1659754,1659977]|224 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:42 Query End:84 Subject Strand: POSITIVE Subject Start: 18 Subject End: 60 .........................................ttaatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... .........................................ttaatactcaatgaaaatcaaagagcaaactaggaaactagcc.................................................................... HSP 2 e-value: 3.0E-7 bit: 56.0 Len: 28 Query Start:123 Query End:150 Subject Strand: POSITIVE Subject Start: 109 Subject End: 136 ..........................................................................................................................ggtttgaagagattttcgaagagtataa.. ..........................................................................................................................ggtttgaagagattttcgaagagtataa.. Subject: NC_003098_spr1143_spr1144|hypothetical protein:DNA processing Smf protein|NEGATIVE:NEGATIVE|[1145384,1145893]|510 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:45 Query End:87 Subject Strand: POSITIVE Subject Start: 198 Subject End: 240 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccaca................................................................. ............................................atactcaatgaaaatcaaagcgcaaactaggaagctagccaca................................................................. HSP 2 e-value: 2.0E-8 bit: 60.0 Len: 34 Query Start:115 Query End:148 Subject Strand: POSITIVE Subject Start: 323 Subject End: 356 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtat.... ..................................................................................................................gctgacgtagtttgaagagattttcgaagagtat.... Subject: NC_003028_SP_2140_SP_2141|hypothetical protein:glycosyl hydrolase-related protein|NEGATIVE:NEGATIVE|[2050421,2050571]|151 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 39 Query Start:45 Query End:83 Subject Strand: POSITIVE Subject Start: 39 Subject End: 77 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagc..................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagctagc..................................................................... HSP 2 e-value: 2.0E-8 bit: 60.0 Len: 30 Query Start:115 Query End:144 Subject Strand: POSITIVE Subject Start: 119 Subject End: 148 ..................................................................................................................gctgacgtggtttgaagagattttcgaaga........ ..................................................................................................................gctgacgtggtttgaagagattttcgaaga........ Subject: NC_003028_SP_1883_SP_1884|dextran glucosidase DexS, putative:trehalose PTS system, IIABC components|NEGATIVE:NEGATIVE|[1786505,1786681]|177 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:45 Query End:87 Subject Strand: POSITIVE Subject Start: 66 Subject End: 108 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccaca................................................................. ............................................atactcaatgaaaatcaaagaacaaactaggaagctagccaca................................................................. HSP 2 e-value: 4.0E-10 bit: 65.9 Len: 33 Query Start:115 Query End:147 Subject Strand: POSITIVE Subject Start: 145 Subject End: 177 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagta..... ..................................................................................................................gctgacgtggtttgaagagattttcgaagagta..... Subject: NC_003028_SP_1872_SP_1873|iron-compound ABC transporter, iron-compound-binding protein:hypothetical protein|POSITIVE:NEGATIVE|[1778228,1778451]|224 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:42 Query End:84 Subject Strand: POSITIVE Subject Start: 18 Subject End: 60 .........................................ttaatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... .........................................ttaatactcaatgaaaatcaaagagcaaactaggaaactagcc.................................................................... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 36 Query Start:115 Query End:150 Subject Strand: POSITIVE Subject Start: 101 Subject End: 136 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. ..................................................................................................................gctgacgcggtttgaagagattttcgaagagtataa.. Subject: NC_003028_SP_1265_SP_1266|hypothetical protein:DNA processing protein DprA, putative|NEGATIVE:NEGATIVE|[1198773,1199283]|511 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 43 Query Start:45 Query End:87 Subject Strand: POSITIVE Subject Start: 199 Subject End: 241 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccaca................................................................. ............................................atactcaatgaaaatcaaagcgcaaactaggaagctagccaca................................................................. HSP 2 e-value: 2.0E-8 bit: 60.0 Len: 34 Query Start:115 Query End:148 Subject Strand: POSITIVE Subject Start: 324 Subject End: 357 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtat.... ..................................................................................................................gctgacgtagtttgaagagattttcgaagagtat.... Subject: NC_003028_SP_0631_SP_0633|50S ribosomal protein L1:hypothetical protein|POSITIVE:POSITIVE|[598117,598657]|541 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:102 Query End:148 Subject Strand: NEGATIVE Subject Start: 340 Subject End: 386 .....................................................................................................acggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... .....................................................................................................acggcaaggcgacgttgacgtggtttgaagagattttcgaagagtat.... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 40 Query Start:45 Query End:84 Subject Strand: NEGATIVE Subject Start: 496 Subject End: 535 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaaccaaagagcaaactaggaaactagcc.................................................................... Subject: NC_003028_SP_0033_SP_0034|hypothetical protein:membrane protein|POSITIVE:NEGATIVE|[34691,35008]|318 HSP 1 e-value: 9.0E-14 bit: 77.8 Len: 47 Query Start:101 Query End:147 Subject Strand: POSITIVE Subject Start: 272 Subject End: 318 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta..... ....................................................................................................tacggcaaggcgacgttgacgtggtttgaagagattttcgaagagta..... HSP 2 e-value: 4.0E-13 bit: 75.8 Len: 42 Query Start:45 Query End:86 Subject Strand: POSITIVE Subject Start: 34 Subject End: 75 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccac.................................................................. ............................................atactcaatgaaaatcaaagagcaaactaggaaactagccac.................................................................. Subject: NC_008533_SPD_0047_SPD_0049|hypothetical protein:competence factor transporting ATP-binding/permease protein ComA|POSITIVE:POSITIVE|[39873,41901]|2029 HSP 1 e-value: 4.0E-13 bit: 75.8 Len: 42 Query Start:43 Query End:84 Subject Strand: NEGATIVE Subject Start: 1971 Subject End: 2012 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaatgaaaatcaaagagcaaactaggaaactagcc.................................................................... HSP 2 e-value: 1.0E-6 bit: 54.0 Len: 50 Query Start:101 Query End:150 Subject Strand: NEGATIVE Subject Start: 1858 Subject End: 1908 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagtataa.. ....................................................................................................tacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagtataa.. Subject: NC_008533_SPD_0039_SPD_0040|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[34462,34651]|190 HSP 1 e-value: 4.0E-13 bit: 75.8 Len: 46 Query Start:101 Query End:146 Subject Strand: POSITIVE Subject Start: 144 Subject End: 189 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagt...... ....................................................................................................tacggcaaggcgacgttgacgtggtttgaagagattttcgaagagt...... HSP 2 e-value: 5.0E-6 bit: 52.0 Len: 30 Query Start:45 Query End:74 Subject Strand: POSITIVE Subject Start: 34 Subject End: 63 ............................................atactcaatgaaaatcaaagagcaaactag.............................................................................. ............................................atactcaatgaaaatcaaagagcacactag.............................................................................. Subject: NC_003098_spr1638_spr1639|hypothetical protein:Catabolite control protein|NEGATIVE:NEGATIVE|[1611092,1611987]|896 HSP 1 e-value: 4.0E-13 bit: 75.8 Len: 50 Query Start:101 Query End:150 Subject Strand: NEGATIVE Subject Start: 99 Subject End: 148 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ....................................................................................................tacggcaaggcgacgttgacgcggtttgaagagattttcgaagagtataa.. HSP 2 e-value: 4.0E-13 bit: 75.8 Len: 42 Query Start:43 Query End:84 Subject Strand: NEGATIVE Subject Start: 257 Subject End: 298 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaatgaaaatcaaagagcaaactaggaaactagcc.................................................................... Subject: NC_003098_spr0429_spr0430|hypothetical protein:ABC transporter ATP-binding protein - cobalt transport|POSITIVE:POSITIVE|[429872,430191]|320 HSP 1 e-value: 4.0E-13 bit: 75.8 Len: 50 Query Start:101 Query End:150 Subject Strand: POSITIVE Subject Start: 103 Subject End: 152 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ....................................................................................................tacggcaaggcgaagctgatgtggtttgaagagattttcgaagagtataa.. HSP 2 e-value: 2.0E-11 bit: 69.9 Len: 39 Query Start:46 Query End:84 Subject Strand: POSITIVE Subject Start: 1 Subject End: 39 .............................................tactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... .............................................tactcaatgaaaatcaaagagcaaactaggaagttagcc.................................................................... Subject: NC_003098_spr0033_spr0034|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[34462,34651]|190 HSP 1 e-value: 4.0E-13 bit: 75.8 Len: 46 Query Start:101 Query End:146 Subject Strand: POSITIVE Subject Start: 144 Subject End: 189 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagt...... ....................................................................................................tacggcaaggcgacgttgacgtggtttgaagagattttcgaagagt...... HSP 2 e-value: 5.0E-6 bit: 52.0 Len: 30 Query Start:45 Query End:74 Subject Strand: POSITIVE Subject Start: 34 Subject End: 63 ............................................atactcaatgaaaatcaaagagcaaactag.............................................................................. ............................................atactcaatgaaaatcaaagagcacactag.............................................................................. Subject: NC_003028_SP_1546_SP_1547|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[1454054,1454329]|276 HSP 1 e-value: 4.0E-13 bit: 75.8 Len: 50 Query Start:101 Query End:150 Subject Strand: POSITIVE Subject Start: 106 Subject End: 155 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ....................................................................................................tacggtaaggcgacactgacgtggcttgaagagattttcaaagagtataa.. HSP 2 e-value: 4.0E-10 bit: 65.9 Len: 45 Query Start:47 Query End:91 Subject Strand: POSITIVE Subject Start: 6 Subject End: 50 ..............................................actcaatgaaaatcaaagagcaaactaggaagctagccacaagct............................................................. ..............................................actcaataaaaatcaaaaagcaaactaggaagctagccgcaagct............................................................. Subject: NC_003028_SP_0145_SP_0146|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[143896,144439]|544 HSP 1 e-value: 4.0E-13 bit: 75.8 Len: 42 Query Start:43 Query End:84 Subject Strand: NEGATIVE Subject Start: 442 Subject End: 483 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaatgaaaatcaaagagcaaactaggaaactagcc.................................................................... HSP 2 e-value: 9.0E-8 bit: 58.0 Len: 33 Query Start:115 Query End:147 Subject Strand: NEGATIVE Subject Start: 242 Subject End: 274 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagta..... ..................................................................................................................gctgacgtggtttgaagagagtttcgaagagta..... Subject: NC_008533_SPD_1744_SPD_1745|lipoprotein, putative:transcriptional regulator PlcR, putative|NEGATIVE:NEGATIVE|[1737854,1738235]|382 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 45 Query Start:43 Query End:87 Subject Strand: POSITIVE Subject Start: 103 Subject End: 147 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagccaca................................................................. ..........................................taatactcaatgaaaatcaaagatcaaactaggtagctagccaca................................................................. HSP 2 e-value: 3.0E-7 bit: 56.0 Len: 36 Query Start:115 Query End:150 Subject Strand: POSITIVE Subject Start: 184 Subject End: 219 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. ..................................................................................................................gctgacgtgatttgaagagattttcgaagaatataa.. Subject: NC_008533_SPD_1458_SPD_1459|GTP pyrophosphokinase:metallo-beta-lactamase superfamily protein|NEGATIVE:POSITIVE|[1472689,1473682]|994 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 49 Query Start:45 Query End:93 Subject Strand: POSITIVE Subject Start: 854 Subject End: 902 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgt........................................................... ............................................atactcaatgaaaatcaaagagcaaactagaaagctagccgcaggctgt........................................................... HSP 2 e-value: 6.0E-12 bit: 71.9 Len: 44 Query Start:41 Query End:84 Subject Strand: POSITIVE Subject Start: 290 Subject End: 333 ........................................attaatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ........................................attaatactaaatgaaaatcaaagagcaaactaggaaactagcc.................................................................... HSP 3 e-value: 9.0E-11 bit: 67.9 Len: 50 Query Start:101 Query End:150 Subject Strand: POSITIVE Subject Start: 396 Subject End: 445 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ....................................................................................................tacggcaaggcgacgttgacgcggtttgaagagatttttgaagagtataa.. Subject: NC_008533_SPD_1016_SPD_1017|exonuclease RexA:hypothetical protein|POSITIVE:POSITIVE|[1035936,1036104]|169 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 45 Query Start:107 Query End:151 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 45 ..........................................................................................................aaggcgacgctgacgtggtttgaagagattttcgaagagtataag. ..........................................................................................................aaggcgaagctgacgtggtttgaagagattttcaaagagtataag. HSP 2 e-value: 9.0E-11 bit: 67.9 Len: 42 Query Start:43 Query End:84 Subject Strand: NEGATIVE Subject Start: 115 Subject End: 156 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaataaaaatcaaagagcaaactagaaagctagcc.................................................................... Subject: NC_008533_SPD_0622_SPD_0623|transcriptional regulator, TENA/THI-4 family protein, putative:hydroxyethylthiazole kinase|POSITIVE:POSITIVE|[644856,645143]|288 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 37 Query Start:45 Query End:81 Subject Strand: NEGATIVE Subject Start: 157 Subject End: 193 ............................................atactcaatgaaaatcaaagagcaaactaggaagcta....................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagcta....................................................................... HSP 2 e-value: 6.0E-9 bit: 61.9 Len: 31 Query Start:116 Query End:146 Subject Strand: NEGATIVE Subject Start: 38 Subject End: 68 ...................................................................................................................ctgacgtggtttgaagagattttcgaagagt...... ...................................................................................................................ctgacgtggtttgaagagattttcgaagagt...... Subject: NC_008533_SPD_0366_SPD_0367|helicase, RecD/TraA family protein:signal peptidase I|NEGATIVE:NEGATIVE|[371171,371403]|233 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 41 Query Start:44 Query End:84 Subject Strand: NEGATIVE Subject Start: 122 Subject End: 162 ...........................................aatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ...........................................aatactcaatgaaaatcaaagaacaaactaggaagctagcc.................................................................... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 36 Query Start:115 Query End:150 Subject Strand: NEGATIVE Subject Start: 46 Subject End: 81 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. ..................................................................................................................gctgacgtggtttgaagatattttcgaagagtataa.. Subject: NC_008533_SPD_0160_SPD_0161|nrdI protein, putative:hypothetical protein|POSITIVE:NEGATIVE|[164957,165248]|292 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 37 Query Start:46 Query End:82 Subject Strand: POSITIVE Subject Start: 1 Subject End: 37 .............................................tactcaatgaaaatcaaagagcaaactaggaagctag...................................................................... .............................................tactcaatgaaaatcaaagagcaaactaggaagctag...................................................................... HSP 2 e-value: 3.0E-7 bit: 56.0 Len: 36 Query Start:115 Query End:150 Subject Strand: POSITIVE Subject Start: 79 Subject End: 114 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. ..................................................................................................................gctgacgtggtttgaagagattctcgaatagtataa.. Subject: NC_003098_spr1998_spr1999|Response regulator:Class III stress response-related ATPase, truncation|NEGATIVE:NEGATIVE|[1992320,1992960]|641 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 37 Query Start:115 Query End:151 Subject Strand: NEGATIVE Subject Start: 161 Subject End: 197 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataag. ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataag. HSP 2 e-value: 9.0E-11 bit: 67.9 Len: 38 Query Start:47 Query End:84 Subject Strand: NEGATIVE Subject Start: 558 Subject End: 595 ..............................................actcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..............................................actcaatgaaaatcaaagagcaaactaggcagctagcc.................................................................... HSP 3 e-value: 2.0E-8 bit: 60.0 Len: 34 Query Start:115 Query End:148 Subject Strand: NEGATIVE Subject Start: 485 Subject End: 518 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtat.... ..................................................................................................................gctgacgtagtttgaagagattttcgaagagtat.... Subject: NC_003098_spr1762_spr1763|hypothetical protein:Transcriptional activator|NEGATIVE:NEGATIVE|[1730322,1730703]|382 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 45 Query Start:43 Query End:87 Subject Strand: POSITIVE Subject Start: 103 Subject End: 147 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagccaca................................................................. ..........................................taatactcaatgaaaatcaaagatcaaactaggtagctagccaca................................................................. HSP 2 e-value: 3.0E-7 bit: 56.0 Len: 36 Query Start:115 Query End:150 Subject Strand: POSITIVE Subject Start: 184 Subject End: 219 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. ..................................................................................................................gctgacgtgatttgaagagattttcgaagaatataa.. Subject: NC_003098_spr1040_spr1041|First subunit of major exonuclease:hypothetical protein|POSITIVE:POSITIVE|[1028405,1028573]|169 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 45 Query Start:107 Query End:151 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 45 ..........................................................................................................aaggcgacgctgacgtggtttgaagagattttcgaagagtataag. ..........................................................................................................aaggcgaagctgacgtggtttgaagagattttcaaagagtataag. HSP 2 e-value: 9.0E-11 bit: 67.9 Len: 42 Query Start:43 Query End:84 Subject Strand: NEGATIVE Subject Start: 115 Subject End: 156 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaataaaaatcaaagagcaaactagaaagctagcc.................................................................... Subject: NC_003098_spr0792_spr0793|Type 1 restriction modification system endonuclease R:Arginine repressor|POSITIVE:NEGATIVE|[792302,792886]|585 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 41 Query Start:43 Query End:83 Subject Strand: POSITIVE Subject Start: 262 Subject End: 302 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagc..................................................................... ..........................................taatactcaatgaaaatcaaagagcaaactaggaaactagc..................................................................... HSP 2 e-value: 9.0E-11 bit: 67.9 Len: 50 Query Start:101 Query End:150 Subject Strand: POSITIVE Subject Start: 412 Subject End: 461 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataa.. ....................................................................................................tacggcaaggcgacgttgacgcggattgaagagattttcgaagagtataa.. Subject: NC_003098_spr0628_spr0629|hypothetical protein:hydroxyethylthiazole kinase|POSITIVE:POSITIVE|[637325,637591]|267 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 37 Query Start:45 Query End:81 Subject Strand: NEGATIVE Subject Start: 157 Subject End: 193 ............................................atactcaatgaaaatcaaagagcaaactaggaagcta....................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagcta....................................................................... HSP 2 e-value: 6.0E-9 bit: 61.9 Len: 31 Query Start:116 Query End:146 Subject Strand: NEGATIVE Subject Start: 38 Subject End: 68 ...................................................................................................................ctgacgtggtttgaagagattttcgaagagt...... ...................................................................................................................ctgacgtggtttgaagagattttcgaagagt...... Subject: NC_003098_spr0363_spr0364|Exonuclease V:Signal peptidase I|NEGATIVE:NEGATIVE|[363642,363874]|233 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 41 Query Start:44 Query End:84 Subject Strand: NEGATIVE Subject Start: 122 Subject End: 162 ...........................................aatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ...........................................aatactcaatgaaaatcaaagaacaaactaggaagctagcc.................................................................... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 36 Query Start:115 Query End:150 Subject Strand: NEGATIVE Subject Start: 46 Subject End: 81 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. ..................................................................................................................gctgacgtggtttgaagatattttcgaagagtataa.. Subject: NC_003098_spr0156_spr0157|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[164957,165248]|292 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 37 Query Start:46 Query End:82 Subject Strand: POSITIVE Subject Start: 1 Subject End: 37 .............................................tactcaatgaaaatcaaagagcaaactaggaagctag...................................................................... .............................................tactcaatgaaaatcaaagagcaaactaggaagctag...................................................................... HSP 2 e-value: 3.0E-7 bit: 56.0 Len: 36 Query Start:115 Query End:150 Subject Strand: POSITIVE Subject Start: 79 Subject End: 114 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. ..................................................................................................................gctgacgtggtttgaagagattctcgaatagtataa.. Subject: NC_003028_SP_2193_SP_2194|DNA-binding response regulator:ATP-dependent Clp protease, ATP-binding subunit|NEGATIVE:NEGATIVE|[2114767,2115407]|641 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 37 Query Start:115 Query End:151 Subject Strand: NEGATIVE Subject Start: 161 Subject End: 197 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataag. ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataag. HSP 2 e-value: 9.0E-11 bit: 67.9 Len: 42 Query Start:43 Query End:84 Subject Strand: NEGATIVE Subject Start: 237 Subject End: 278 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatattcaatgaaaatcaaagaacaaactaggaagctagcc.................................................................... HSP 3 e-value: 9.0E-11 bit: 67.9 Len: 34 Query Start:115 Query End:148 Subject Strand: NEGATIVE Subject Start: 485 Subject End: 518 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtat.... ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtat.... HSP 4 e-value: 1.0E-9 bit: 63.9 Len: 36 Query Start:49 Query End:84 Subject Strand: NEGATIVE Subject Start: 558 Subject End: 593 ................................................tcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ................................................tcaatgaaaatcaaagagcaaactaggcagctagcc.................................................................... Subject: NC_003028_SP_1945_SP_1946|hypothetical protein:transcriptional regulator PlcR, putative|NEGATIVE:NEGATIVE|[1848657,1849038]|382 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 45 Query Start:43 Query End:87 Subject Strand: POSITIVE Subject Start: 103 Subject End: 147 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagccaca................................................................. ..........................................taatactcaatgaaaatcaaagatcaaactaggtagctagccaca................................................................. HSP 2 e-value: 3.0E-7 bit: 56.0 Len: 36 Query Start:115 Query End:150 Subject Strand: POSITIVE Subject Start: 184 Subject End: 219 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. ..................................................................................................................gctgacgtgatttgaagagattttcgaagaatataa.. Subject: NC_003028_SP_1840_SP_1841|ABC transporter, ATP-binding/permease protein:hypothetical protein|NEGATIVE:NEGATIVE|[1751943,1752147]|205 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 41 Query Start:44 Query End:84 Subject Strand: POSITIVE Subject Start: 38 Subject End: 78 ...........................................aatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ...........................................aatactcaatgaaaatcaaagagcaaactaggaaactagcc.................................................................... HSP 2 e-value: 6.0E-12 bit: 71.9 Len: 52 Query Start:101 Query End:152 Subject Strand: POSITIVE Subject Start: 141 Subject End: 192 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtataaga ....................................................................................................tacggcaaggcgacgttgacgcggtttgaagagattttcgaagagtacaaga Subject: NC_003028_SP_1645_SP_1646|GTP pyrophosphokinase:metallo-beta-lactamase superfamily protein|NEGATIVE:POSITIVE|[1543974,1544931]|958 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 49 Query Start:45 Query End:93 Subject Strand: POSITIVE Subject Start: 818 Subject End: 866 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgt........................................................... ............................................atactcaatgaaaatcaaagagcaaactagaaagctagccgcaggctgt........................................................... HSP 2 e-value: 6.0E-12 bit: 71.9 Len: 44 Query Start:41 Query End:84 Subject Strand: POSITIVE Subject Start: 290 Subject End: 333 ........................................attaatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ........................................attaatactaaatgaaaatcaaagagcaaactaggaaactagcc.................................................................... HSP 3 e-value: 3.0E-7 bit: 56.0 Len: 32 Query Start:117 Query End:148 Subject Strand: POSITIVE Subject Start: 899 Subject End: 930 ....................................................................................................................tgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................................tgacgcggtttgaagagattttcgaagagtat.... HSP 4 e-value: 5.0E-6 bit: 52.0 Len: 34 Query Start:117 Query End:150 Subject Strand: POSITIVE Subject Start: 375 Subject End: 408 ....................................................................................................................tgacgtggtttgaagagattttcgaagagtataa.. ....................................................................................................................tgacgcggtttgaagagatttttgaagagtataa.. Subject: NC_003028_SP_1152_SP_1153|exonuclease RexA:hypothetical protein|POSITIVE:POSITIVE|[1082280,1082493]|214 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 45 Query Start:107 Query End:151 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 45 ..........................................................................................................aaggcgacgctgacgtggtttgaagagattttcgaagagtataag. ..........................................................................................................aaggcgaagctgacgtggtttgaagagattttcaaagagtataag. HSP 2 e-value: 9.0E-11 bit: 67.9 Len: 42 Query Start:43 Query End:84 Subject Strand: NEGATIVE Subject Start: 160 Subject End: 201 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ..........................................taatactcaataaaaatcaaagagcaaactagaaagctagcc.................................................................... Subject: NC_003028_SP_0892_SP_0893|type I restriction-modification system, R subunit, putative:transcriptional repressor, putative|POSITIVE:NEGATIVE|[843476,843980]|505 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 41 Query Start:43 Query End:83 Subject Strand: POSITIVE Subject Start: 262 Subject End: 302 ..........................................taatactcaatgaaaatcaaagagcaaactaggaagctagc..................................................................... ..........................................taatactcaatgaaaatcaaagagcaaactaggaaactagc..................................................................... HSP 2 e-value: 3.0E-7 bit: 56.0 Len: 36 Query Start:115 Query End:150 Subject Strand: POSITIVE Subject Start: 344 Subject End: 379 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. ..................................................................................................................gctgacgcggattgaagagattttcgaagagtataa.. Subject: NC_003028_SP_0401_SP_0402|helicase, putative:signal peptidase I|NEGATIVE:NEGATIVE|[382179,382456]|278 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 41 Query Start:44 Query End:84 Subject Strand: NEGATIVE Subject Start: 167 Subject End: 207 ...........................................aatactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ...........................................aatactcaatgaaaatcaaagaacaaactaggaagctagcc.................................................................... HSP 2 e-value: 1.0E-9 bit: 63.9 Len: 36 Query Start:115 Query End:150 Subject Strand: NEGATIVE Subject Start: 46 Subject End: 81 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. ..................................................................................................................gctgacgtggtttgaagatattttcgaagagtataa.. Subject: NC_003028_SP_0158_SP_0159|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[156000,156291]|292 HSP 1 e-value: 1.0E-12 bit: 73.8 Len: 37 Query Start:46 Query End:82 Subject Strand: POSITIVE Subject Start: 1 Subject End: 37 .............................................tactcaatgaaaatcaaagagcaaactaggaagctag...................................................................... .............................................tactcaatgaaaatcaaagagcaaactaggaagctag...................................................................... HSP 2 e-value: 3.0E-7 bit: 56.0 Len: 36 Query Start:115 Query End:150 Subject Strand: POSITIVE Subject Start: 79 Subject End: 114 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtataa.. ..................................................................................................................gctgacgtggtttgaagagattctcgaatagtataa.. Subject: NC_008533_SPD_1715_SPD_1716|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1714535,1714870]|336 HSP 1 e-value: 6.0E-12 bit: 71.9 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 87 Subject End: 126 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagaccaaactaggaagctagcc.................................................................... HSP 2 e-value: 2.0E-8 bit: 60.0 Len: 34 Query Start:115 Query End:148 Subject Strand: POSITIVE Subject Start: 211 Subject End: 244 ..................................................................................................................gctgacgtggtttgaagagattttcgaagagtat.... ..................................................................................................................gctgacgtggtttgaagagattttcaaagagtat.... Subject: NC_008533_SPD_1568_SPD_1569|GTP cyclohydrolase, putative:aquaporin|POSITIVE:NEGATIVE|[1586901, 1587379]|479 HSP 1 e-value: 6.0E-12 bit: 71.9 Len: 40 Query Start:45 Query End:84 Subject Strand: POSITIVE Subject Start: 5 Subject End: 44 ............................................atactcaatgaaaatcaaagagcaaactaggaagctagcc.................................................................... ............................................atactcaatgaaaatcaaagagcaaactaggaagttagcc.................................................................... HSP 2 e-value: 6.0E-12 bit: 71.9 Len: 48 Query Start:101 Query End:148 Subject Strand: POSITIVE Subject Start: 378 Subject End: 425 ....................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagtat.... ....................................................................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagtat.... Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UUUAUUAAUACUCAAUGAAAAUCAAAGAGCAAACUAGGAAGCUAGCCACAAGCUGUACUUGAGUACGGUAAGGCGACGCUGACGUGGUUUGAAGAGAUUUUCGAAGAGUAUAAGA .......((((((..((((((((......((((((((..(((..(((....(((((((....)))))))..)))...)))..).)))))))....))))))))..)))))).... (-38.70) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UCUUAUACUCUUCGAAAAUCUCUUCAAACCACGUCAGCGUCGCCUUACCGUACUCAAGUACAGCUUGUGGCUAGCUUCCUAGUUUGCUCUUUGAUUUUCAUUGAGUAUUAAUAAA ....((((((...(((((((....(((((...(..(((...(((...(.((((....)))).).....)))..)))..)..)))))......)))))))...))))))....... (-26.10) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 927 90 41 199 150 smit:SMT_1963|5end_ribonuclease_BN,_putative_1896462..1896692_NEGATIVE 927 90 41 186 137 smit:SMT_483|5end_transcriptional_activator_TipA,_putative_418827..419057_POSITIVE 850 70 21 231 182 smit:SMT_1179|5end_aldose_1-epimerase_1137854..1138084_NEGATIVE 822 96 52 231 187 smit:SMT_833|5end_hypothetical_protein_predicted_by_Glimmer/Critica_775362..775592_NEGATIVE 821 70 21 214 165 smit:SMT_1810|5end_hypothetical_protein_1785219..1785449_POSITIVE 806 78 31 188 141 smit:SMT_1602|5end_hypothetical_protein_1592385..1592615_POSITIVE 806 78 31 200 153 smit:SMT_1488|5end_K06147_ATP-binding_cassette,_subfamily_B,_bacterial_1467157..1467387_POSITIVE 806 78 31 197 150 smit:SMT_130|5end_capsular_polysaccharide_biosynthesis_protein_80995..81225_POSITIVE 805 70 21 177 128 smit:SMT_1782|5end_hypothetical_protein_1759520..1759750_POSITIVE 790 70 21 228 179 smit:SMT_1138|5end_hypothetical_protein_1079547..1079777_NEGATIVE 774 110 61 52 2 smit:SMT_2109|5end_hypothetical_protein_predicted_by_Glimmer/Critica_1999099..1999329_NEGATIVE 761 110 64 84 38 smit:SMT_958|5end_hypothetical_protein_predicted_by_Glimmer/Critica_905052..905282_POSITIVE 727 110 64 219 173 smit:SMT_677|5end_DNA_topoisomerase_I_587318..587548_NEGATIVE 694 50 5 214 169 smit:SMT_1379|5end_thymidylate_kinase_1357438..1357668_NEGATIVE 634 59 11 164 118 smit:SMT_366|5end_hypothetical_protein_302085..302315_POSITIVE 632 59 11 154 108 smit:SMT_1200|5end_K06148_ATP-binding_cassette,_subfamily_C,_bacterial_1163235..1163465_NEGATIVE 627 53 11 231 189 smit:SMT_443|5end_hydroxyethylthiazole_kinase_382555..382785_POSITIVE 594 97 51 231 187 smit:SMT_775|5end_alpha-acetolactate_decarboxylase_685972..686202_NEGATIVE 571 50 8 189 148 smit:SMT_150|5end_K02030_polar_amino_acid_transport_system_substrate-binding_protein_98787..99017_POSITIVE 566 110 67 224 178 smit:SMT_163|5end_cardiolipin_synthetase_107309..107539_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 981 90 41 70 21 smit:SMT_915|3end_sucrose_operon_repressor_868619..868769_POSITIVE 955 90 41 70 21 smit:SMT_1477|3end_K02077_zinc/manganese_transport_system_substrate-binding_protein_1459447..1459597_NEGATIVE 927 90 41 65 16 smit:SMT_1964|3end_sodium/hydrogen_exchanger_family_protein_1896596..1896746_NEGATIVE 903 90 41 69 20 smit:SMT_2109|3end_hypothetical_protein_predicted_by_Glimmer/Critica_1999061..1999211_NEGATIVE 903 90 41 69 20 smit:SMT_1180|3end_putative_tagatose-6-phosphate_aldose/ketose_isomerase_1138036..1138186_NEGATIVE 899 90 41 69 20 smit:SMT_1140|3end_glycogen_phosphorylase_1081316..1081466_NEGATIVE 888 90 45 46 1 smit:SMT_1671|3end_hypothetical_protein_1659392..1659542_NEGATIVE 876 110 61 90 41 smit:SMT_834|3end_hypothetical_protein_775517..775667_NEGATIVE 855 90 41 62 13 smit:SMT_1766|3end_sucrose-6-phosphate_hydrolase_1743101..1743251_POSITIVE 847 90 41 69 20 smit:SMT_1809|3end_MutT/NUDIX_family_protein_1785134..1785284_POSITIVE 835 110 62 64 17 smit:SMT_1815|3end_K02035_peptide/nickel_transport_system_substrate-binding_protein_1788899..1789049_NEGATIVE 806 78 31 57 10 smit:SMT_698|3end_uracil_permease_609769..609919_POSITIVE 798 110 61 87 38 smit:SMT_799|3end_hypothetical_protein_707296..707446_NEGATIVE 797 110 65 46 1 smit:SMT_1872|3end_K03217_preprotein_translocase_YidC_subunit_1830883..1831033_NEGATIVE 783 110 62 84 37 smit:SMT_124|3end_hypothetical_protein_75590..75740_NEGATIVE 776 110 62 85 38 smit:SMT_1569|3end_dihydroxy-acid_dehydratase_1563068..1563218_POSITIVE 743 109 64 90 45 smit:SMT_1216|3end_hypothetical_protein_1175969..1176119_POSITIVE 731 70 22 49 1 smit:SMT_890|3end_K02029_polar_amino_acid_transport_system_permease_protein_837692..837842_POSITIVE 727 110 64 90 44 smit:SMT_678|3end_K04096_DNA_processing_protein_587447..587597_NEGATIVE 715 110 64 90 44 smit:SMT_1912|3end_D-alanyl-D-alanine_carboxypeptidase_1857807..1857957_NEGATIVE