Origin IGS: aagatactccaatcttttttcttccattttagctgaaacagtcggaattttccaatgatttgaccggaaatatgggcatagaaaaaacgccagctcatgtgagaatgacgtttttcagaggcttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 tactcttcgaaaatctcttcaaaccacgtcagcgttgccttgccgtactcaagtacagcctgtggctagcttcctagtttgctctttgattttcattgagtataagcctctgaaaaacgtcattctcacatgagctggcgttttttctatgcccatatttccggtcaaatcattggaaaattccgactgtttcagctaaaatggaagaaaaaagattggagtatctt Mask Tandem Repeat Region ================================================ aagatactccaatcttttttcttccattttagctgaaacagtcggaattttccaatgatttgaccggaaatatgggcatagaaaaaacgccagctcatgtgagaatgacgtttttcagaggcttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta Find is-nt database================================================ Query_seq: SMT_1476:SMT_1477|SMT_1476:SMT_1477:thiol peroxidase:K02077 zinc/manganese transport system substrate-binding protein:<-<-:1459310..1459536 227 aagatactccaatcttttttcttccattttagctgaaacagtcggaattttccaatgatttgaccggaaatatgggcatagaaaaaacgccagctcatgtgagaatgacgtttttcagaggcttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: SMT_1476:SMT_1477|SMT_1476:SMT_1477:thiol peroxidase:K02077 zinc/manganese transport system substrate-binding protein:<-<-:1459310..1459536 227 aagatactccaatcttttttcttccattttagctgaaacagtcggaattttccaatgatttgaccggaaatatgggcatagaaaaaacgccagctcatgtgagaatgacgtttttcagaggcttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: SMT_1476:SMT_1477|SMT_1476:SMT_1477:thiol peroxidase:K02077 zinc/manganese transport system substrate-binding protein:<-<-:1459310..1459536 227 aagatactccaatcttttttcttccattttagctgaaacagtcggaattttccaatgatttgaccggaaatatgggcatagaaaaaacgccagctcatgtgagaatgacgtttttcagaggcttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 aagatactccaatcttttttcttccattttagctgaaacagtcggaattttccaatgatttgaccggaaatatgggcatagaaaaaacgccagctcatgtgagaatgacgtttttcagaggcttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta Predict ORF larger than 30AA ================================================ Protein_Len: 48 Strand: + Start: 33 End: 176 ................................ M K Q S E F S N D L T G N M G I E K T P A H V R M T F F R G L Y S M K I K E Q T R K L A T G C T ................................................... Protein_Len: 32 Strand: - Start: 98 End: 193 ................................................................................................. T L I V N K L P K Y E I F I L S C V L F S A V P Q V Q T R C P M .................................. Protein_Len: 32 Strand: - Start: 3 End: 98 .. I S W D K K K W K L Q F L R F K G I I Q G S I H A Y F F R W S M ................................................................................................................................. Protein_Len: 31 Strand: - Start: 1 End: 93 L Y E L R K E E M K A S V T P I K W H N S R F Y P C L F F A M ...................................................................................................................................... aagatactccaatcttttttcttccattttagctgaaacagtcggaattttccaatgatttgaccggaaatatgggcatagaaaaaacgccagctcatgtgagaatgacgtttttcagaggcttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: - Score: 84 Start: 26 End: 55 .........................TTGGAAAATTCCGACTGTTTCAGCTAAAAT............................................................................................................................................................................ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ aagatactccaatcttttttcttccattttagctgaaacagtcggaattttccaatgatttgaccggaaatatgggcatagaaaaaacgccagctcatgtgagaatgacgtttttcagaggcttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta Predict TransTerm conf > 70================================================ Find igs database================================================ Query_seq: SMT_1476:SMT_1477|SMT_1476:SMT_1477:thiol peroxidase:K02077 zinc/manganese transport system substrate-binding protein:<-<-:1459310..1459536 227 aagatactccaatcttttttcttccattttagctgaaacagtcggaattttccaatgatttgaccggaaatatgggcatagaaaaaacgccagctcatgtgagaatgacgtttttcagaggcttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta Intra-Species Hit: Count: 43 Min: 1 Max: 227 Len: 227 Subject: smit_SMT_1476_SMT_1477|thiol peroxidase:K02077 zinc/manganese transport system substrate-binding protein|NEGATIVE:NEGATIVE|[1459310,1459536]|227 HSP 1 e-value: 1.0E-126 bit: 450.0 Len: 227 Query Start:1 Query End:227 Subject Strand: POSITIVE Subject Start: 1 Subject End: 227 aagatactccaatcttttttcttccattttagctgaaacagtcggaattttccaatgatttgaccggaaatatgggcatagaaaaaacgccagctcatgtgagaatgacgtttttcagaggcttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta aagatactccaatcttttttcttccattttagctgaaacagtcggaattttccaatgatttgaccggaaatatgggcatagaaaaaacgccagctcatgtgagaatgacgtttttcagaggcttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta Subject: smit_SMT_1535_SMT_1536|exodeoxyribonuclease V alpha chain:trigger factor|POSITIVE:NEGATIVE|[1520574,1520725]|152 HSP 1 e-value: 1.0E-44 bit: 180.0 Len: 103 Query Start:125 Query End:227 Subject Strand: POSITIVE Subject Start: 45 Subject End: 147 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta Subject: smit_SMT_833_SMT_834|hypothetical protein predicted by Glimmer/Critica:hypothetical protein|NEGATIVE:NEGATIVE|[775453,775606]|154 HSP 1 e-value: 2.0E-43 bit: 176.0 Len: 105 Query Start:123 Query End:227 Subject Strand: POSITIVE Subject Start: 50 Subject End: 154 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaagagattttcgaagagta Subject: smit_SMT_798_SMT_799|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[707167,707385]|219 HSP 1 e-value: 2.0E-43 bit: 176.0 Len: 105 Query Start:123 Query End:227 Subject Strand: POSITIVE Subject Start: 112 Subject End: 216 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggtgaagctgacgtggtttgaagagattttcgaagagta Subject: smit_SMT_1139_SMT_1140|rRNA (guanine-N1-)-methyltransferase:glycogen phosphorylase|POSITIVE:NEGATIVE|[1080744,1081405]|662 HSP 1 e-value: 3.0E-42 bit: 172.0 Len: 106 Query Start:122 Query End:227 Subject Strand: POSITIVE Subject Start: 556 Subject End: 662 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_915_SMT_916|sucrose operon repressor:3-hydroxy-3-methylglutaryl-CoA reductase|POSITIVE:NEGATIVE|[868680,868819]|140 HSP 1 e-value: 3.0E-42 bit: 172.0 Len: 107 Query Start:121 Query End:227 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 107 ........................................................................................................................gcttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ........................................................................................................................gcttatactcaatgaaaatcaaagagcgaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta Subject: smit_SMT_2108_SMT_2109|adenylosuccinate lyase:hypothetical protein predicted by Glimmer/Critica|NEGATIVE:NEGATIVE|[1998942,1999150]|209 HSP 1 e-value: 2.0E-37 bit: 157.0 Len: 106 Query Start:122 Query End:227 Subject Strand: POSITIVE Subject Start: 103 Subject End: 209 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactagaaagctagccacaggctgtacttgagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1179_SMT_1180|aldose 1-epimerase:putative tagatose-6-phosphate aldose/ketose isomerase|NEGATIVE:NEGATIVE|[1137945,1138125]|181 HSP 1 e-value: 2.0E-37 bit: 157.0 Len: 106 Query Start:122 Query End:227 Subject Strand: POSITIVE Subject Start: 75 Subject End: 181 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactagaaagctagccacaggctgtacttgagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_482_SMT_483|hypothetical protein predicted by Glimmer/Critica:transcriptional activator TipA, putative|NEGATIVE:POSITIVE|[418627,418966]|340 HSP 1 e-value: 2.0E-37 bit: 157.0 Len: 106 Query Start:122 Query End:227 Subject Strand: NEGATIVE Subject Start: 225 Subject End: 331 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1809_SMT_1810|MutT/NUDIX family protein:hypothetical protein|POSITIVE:POSITIVE|[1785195,1785358]|164 HSP 1 e-value: 8.0E-37 bit: 155.0 Len: 105 Query Start:123 Query End:227 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 106 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1963_SMT_1964|ribonuclease BN, putative:sodium/hydrogen exchanger family protein|NEGATIVE:NEGATIVE|[1896553,1896685]|133 HSP 1 e-value: 3.0E-36 bit: 153.0 Len: 106 Query Start:122 Query End:227 Subject Strand: POSITIVE Subject Start: 23 Subject End: 129 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta .........................................................................................................................cttatactcmatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1849_SMT_1850|hypothetical protein:K01421 putative membrane protein|POSITIVE:POSITIVE|[1813865,1815201]|1337 HSP 1 e-value: 5.0E-35 bit: 149.0 Len: 103 Query Start:125 Query End:227 Subject Strand: POSITIVE Subject Start: 257 Subject End: 359 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ............................................................................................................................atactcaatgaaaatcaaagatcaaactaggaagctagccgtagtcagtacttgagtacggcaaggcgaagctgacgtggtttgaagagattttcgaagagta Subject: smit_SMT_1068_SMT_1069|ATP-dependent DNA helicase RecG:acetyl xylan esterase, putative|POSITIVE:POSITIVE|[1009047,1009469]|423 HSP 1 e-value: 5.0E-35 bit: 149.0 Len: 106 Query Start:122 Query End:227 Subject Strand: POSITIVE Subject Start: 18 Subject End: 124 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1534_SMT_1535|signal peptidase I:exodeoxyribonuclease V alpha chain|POSITIVE:POSITIVE|[1517973,1518206]|234 HSP 1 e-value: 2.0E-34 bit: 147.0 Len: 105 Query Start:123 Query End:227 Subject Strand: POSITIVE Subject Start: 97 Subject End: 202 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcgaaactgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1393_SMT_1394|hypothetical protein:hypothetical protein predicted by Glimmer/Critica|POSITIVE:POSITIVE|[1369621,1370215]|595 HSP 1 e-value: 2.0E-34 bit: 147.0 Len: 105 Query Start:123 Query End:227 Subject Strand: NEGATIVE Subject Start: 153 Subject End: 258 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1138_SMT_1139|hypothetical protein:rRNA (guanine-N1-)- methyltransferase|NEGATIVE:POSITIVE|[1079638, 1079894]|257 HSP 1 e-value: 2.0E-34 bit: 147.0 Len: 105 Query Start:123 Query End:227 Subject Strand: POSITIVE Subject Start: 73 Subject End: 178 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_662_SMT_663|A/G-specific adenine glycosylase:phosphate acetyltransferase|NEGATIVE:NEGATIVE|[573918,574105]|188 HSP 1 e-value: 2.0E-34 bit: 147.0 Len: 105 Query Start:123 Query End:227 Subject Strand: NEGATIVE Subject Start: 50 Subject End: 155 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1601_SMT_1602|hypothetical protein predicted by Glimmer/Critica:hypothetical protein|POSITIVE:POSITIVE|[1592204,1592524]|321 HSP 1 e-value: 3.0E-33 bit: 143.0 Len: 103 Query Start:125 Query End:227 Subject Strand: NEGATIVE Subject Start: 192 Subject End: 295 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_826_SMT_827|hypothetical protein:hypothetical protein|NEGATIVE:POSITIVE|[750113,750528]|416 HSP 1 e-value: 3.0E-33 bit: 143.0 Len: 107 Query Start:121 Query End:227 Subject Strand: NEGATIVE Subject Start: 106 Subject End: 213 ........................................................................................................................gcttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ........................................................................................................................gcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggttgtactggagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1670_SMT_1671|K02030 polar amino acid transport system substrate-binding protein:hypothetical protein|POSITIVE:NEGATIVE|[1659356,1659481]|126 HSP 1 e-value: 1.0E-32 bit: 141.0 Len: 102 Query Start:126 Query End:227 Subject Strand: POSITIVE Subject Start: 1 Subject End: 103 .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_890_SMT_891|K02029 polar amino acid transport system permease protein:oxidoreductase, putative|POSITIVE:POSITIVE|[837753,837989]|237 HSP 1 e-value: 5.0E-32 bit: 139.0 Len: 105 Query Start:123 Query End:227 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 106 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagacgcaggctgtacttgagtacggcaaggtgaagctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_259_SMT_260|dipeptide/tripeptide permease:phage transcriptional repressor|POSITIVE:POSITIVE|[199242,199609]|368 HSP 1 e-value: 5.0E-32 bit: 139.0 Len: 105 Query Start:123 Query End:227 Subject Strand: NEGATIVE Subject Start: 105 Subject End: 210 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgcggtttgaatttgattttcgaagagta Subject: smit_SMT_698_SMT_699|uracil permease:K03106 signal recognition particle, subunit SRP54|POSITIVE:NEGATIVE|[609830,610030]|201 HSP 1 e-value: 7.0E-31 bit: 135.0 Len: 103 Query Start:125 Query End:227 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 104 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ............................................................................................................................atactcaatgaaaatcaaagaacaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1766_SMT_1767|sucrose-6-phosphate hydrolase:oxidoreductase, short chain dehydrogenase/reductase family|POSITIVE:NEGATIVE|[1743162,1743332]|171 HSP 1 e-value: 3.0E-30 bit: 133.0 Len: 106 Query Start:122 Query End:227 Subject Strand: NEGATIVE Subject Start: 8 Subject End: 114 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagtcgcaagctgtacttgagtacggtgaggcgacgctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1689_SMT_1690|PTS enzyme, maltose-and glucose-specific, factor II homologue:K06148 ATP-binding cassette, subfamily C, bacterial|POSITIVE:NEGATIVE|[1673200,1673459]|260 HSP 1 e-value: 1.0E-29 bit: 131.0 Len: 102 Query Start:126 Query End:227 Subject Strand: POSITIVE Subject Start: 1 Subject End: 102 .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta .............................................................................................................................tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaagagattttcgaagagta Subject: smit_SMT_1781_SMT_1782|transcriptional regulator, xre family:hypothetical protein|POSITIVE:POSITIVE|[1759357,1759659]|303 HSP 1 e-value: 2.0E-28 bit: 127.0 Len: 103 Query Start:125 Query End:227 Subject Strand: NEGATIVE Subject Start: 177 Subject End: 280 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgaaggctgtacttgagtacggcaaggtgaagctgacgtagtttgaatttgattttcgaagagta Subject: smit_SMT_1487_SMT_1488|hypothetical protein:K06147 ATP-binding cassette, subfamily B, bacterial|POSITIVE:POSITIVE|[1467137,1467296]|160 HSP 1 e-value: 4.0E-26 bit: 119.0 Len: 103 Query Start:125 Query End:227 Subject Strand: NEGATIVE Subject Start: 19 Subject End: 122 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtactcgagtacggcaaggcgacgttgacgcagtttgaatttgattttcgaagagta Subject: smit_SMT_1814_SMT_1815|amino acid transporter:K02035 peptide/nickel transport system substrate-binding protein|POSITIVE:NEGATIVE|[1788701,1788988]|288 HSP 1 e-value: 6.0E-19 bit: 95.6 Len: 52 Query Start:121 Query End:172 Subject Strand: POSITIVE Subject Start: 64 Subject End: 115 ........................................................................................................................gcttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ........................................................................................................................gcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctg....................................................... HSP 2 e-value: 6.0E-16 bit: 85.7 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 216 Subject End: 262 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggtaaggcaacgctgacgtggtttgaagagattttcgaagagta Subject: smit_SMT_365_SMT_366|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[301808,302224]|417 HSP 1 e-value: 2.0E-18 bit: 93.7 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 245 Subject End: 291 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 4.0E-14 bit: 79.8 Len: 48 Query Start:125 Query End:172 Subject Strand: NEGATIVE Subject Start: 347 Subject End: 394 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctggccgcaggctg....................................................... Subject: smit_SMT_763_SMT_764|alpha-amylase:alanyl-tRNA synthetase|POSITIVE:NEGATIVE|[669341,669584]|244 HSP 1 e-value: 1.0E-17 bit: 91.7 Len: 50 Query Start:123 Query End:172 Subject Strand: POSITIVE Subject Start: 84 Subject End: 133 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctg....................................................... HSP 2 e-value: 9.0E-9 bit: 61.9 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 190 Subject End: 236 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggtgaagctgacgttgtttgaagagattttcgaagagta Subject: smit_SMT_1075_SMT_1076|hypothetical protein:2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase / dihydroneopterin aldolase|POSITIVE:NEGATIVE|[1013931,1014090]|160 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 47 Query Start:126 Query End:172 Subject Strand: POSITIVE Subject Start: 1 Subject End: 47 .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctg....................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 80 Subject End: 112 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta Subject: smit_SMT_1554_SMT_1555|isoleucyl-tRNA synthetase:hypothetical protein|POSITIVE:NEGATIVE|[1539973,1540312]|340 HSP 1 e-value: 9.0E-15 bit: 81.8 Len: 105 Query Start:123 Query End:227 Subject Strand: NEGATIVE Subject Start: 150 Subject End: 254 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ..........................................................................................................................ttatactaaatgaaaatcaaaaagcaaactaggaagctagtcgcaagctgtgctgaagtacagtgaggcgacattgacgtagtttgaagagattttcgaaaagta Subject: smit_SMT_1356_SMT_1357|fibronectin-binding protein-like protein A:endo-beta-N- acetylglucosaminidase|POSITIVE:NEGATIVE|[1334330, 1334539]|210 HSP 1 e-value: 9.0E-15 bit: 81.8 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 50 Subject End: 94 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 35 Query Start:193 Query End:227 Subject Strand: POSITIVE Subject Start: 164 Subject End: 198 ................................................................................................................................................................................................acgctgacgtggtttgaagagattttcgaagagta ................................................................................................................................................................................................acgctgacgtggtttgaagagattttcgaagagta Subject: smit_SMT_1144_SMT_1145|K02026 multiple sugar transport system permease protein:maltodextrose utilization protein MalA|POSITIVE:POSITIVE|[1089205,1089465]|261 HSP 1 e-value: 9.0E-15 bit: 81.8 Len: 45 Query Start:125 Query End:169 Subject Strand: NEGATIVE Subject Start: 97 Subject End: 141 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 1.0E-7 bit: 58.0 Len: 33 Query Start:195 Query End:227 Subject Strand: NEGATIVE Subject Start: 29 Subject End: 61 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagaggttttcgaagagta Subject: smit_SMT_1026_SMT_1027|sucrose phosphorylase:K02026 multiple sugar transport system permease protein|NEGATIVE:NEGATIVE|[962415,962730]|316 HSP 1 e-value: 9.0E-15 bit: 81.8 Len: 45 Query Start:125 Query End:169 Subject Strand: NEGATIVE Subject Start: 134 Subject End: 178 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 1.0E-7 bit: 58.0 Len: 33 Query Start:195 Query End:227 Subject Strand: NEGATIVE Subject Start: 67 Subject End: 99 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtgatttgaagagattttcgaagagta Subject: smit_SMT_235_SMT_236|hypothetical protein:ribosomal small subunit pseudouridine synthase A|POSITIVE:POSITIVE|[174452,174764]|313 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 48 Query Start:125 Query End:172 Subject Strand: POSITIVE Subject Start: 14 Subject End: 61 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctg....................................................... HSP 2 e-value: 9.0E-9 bit: 61.9 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 206 Subject End: 252 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgacgttgacgcggtttgaagagatttttgaagagta Subject: smit_SMT_1871_SMT_1872|modification methylase, HemK family:K03217 preprotein translocase YidC subunit|NEGATIVE:NEGATIVE|[1830592,1830972]|381 HSP 1 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 291 Subject End: 337 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgaagctgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 6.0E-13 bit: 75.8 Len: 48 Query Start:125 Query End:172 Subject Strand: POSITIVE Subject Start: 144 Subject End: 191 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ............................................................................................................................atmctcaatgaaaatcaaagagcaaactaggaagctagtcgcaggctg....................................................... Subject: smit_SMT_1569_SMT_1570|dihydroxy-acid dehydratase:hypothetical protein|POSITIVE:NEGATIVE|[1563129,1563339]|211 HSP 1 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 6 Subject End: 52 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgacgttgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 45 Query Start:125 Query End:169 Subject Strand: NEGATIVE Subject Start: 110 Subject End: 154 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagaacaaactaggaaactagccgcagg.......................................................... Subject: smit_SMT_1216_SMT_1217|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[1176030,1176255]|226 HSP 1 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:123 Query End:169 Subject Strand: NEGATIVE Subject Start: 149 Subject End: 195 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcagg.......................................................... HSP 2 e-value: 1.0E-10 bit: 67.9 Len: 46 Query Start:181 Query End:226 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 46 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagt. ....................................................................................................................................................................................tacggcaaggcgacgttgacgtggtttggagagattttcgaagagt. Subject: smit_SMT_775_SMT_776|alpha-acetolactate decarboxylase:hypothetical protein|NEGATIVE:POSITIVE|[686063,686341]|279 HSP 1 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 107 Subject End: 153 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgaagctgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 9.0E-9 bit: 61.9 Len: 47 Query Start:123 Query End:169 Subject Strand: POSITIVE Subject Start: 16 Subject End: 62 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ..........................................................................................................................ttatactcaatgaaaatcaaaaagcaaactakgmagcgagccgcagg.......................................................... Subject: smit_SMT_495_SMT_496|bacterial peptide chain release factor 2 (RF-2):superoxide dismutase, manganese-dependent|POSITIVE:POSITIVE|[430114, 430572]|459 HSP 1 e-value: 6.0E-13 bit: 75.8 Len: 42 Query Start:123 Query End:164 Subject Strand: POSITIVE Subject Start: 157 Subject End: 198 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagcc............................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 307 Subject End: 353 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgacgttgacgcggtttgaagagattttcgaagagta Subject: smit_SMT_451_SMT_452|thiamine-phosphate pyrophosphorylase:phosphomethylpyrimidine kinase|POSITIVE:NEGATIVE|[389708,389866]|159 HSP 1 e-value: 6.0E-13 bit: 75.8 Len: 38 Query Start:125 Query End:162 Subject Strand: POSITIVE Subject Start: 4 Subject End: 41 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctag................................................................. ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctag................................................................. HSP 2 e-value: 1.0E-7 bit: 58.0 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 83 Subject End: 115 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtcgtttgaagagattttcgaagagta Subject: smit_SMT_1591_SMT_1592|DNA-entry nuclease:putative hemolysin|POSITIVE:POSITIVE|[1579529,1579794]|266 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 81 Subject End: 125 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagtgcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 160 Subject End: 192 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta Inter-species Hit: Count: 139 Min: 3 Max: 227 Len: 225 Subject: NC_008533_SPD_1463_SPD_1464|ABC transporter, substrate binding lipoprotein:thiol peroxidase|POSITIVE:POSITIVE|[1479147,1479268]|122 HSP 1 e-value: 1.0E-47 bit: 190.0 Len: 120 Query Start:3 Query End:122 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 120 ..gatactccaatcttttttcttccattttagctgaaacagtcggaattttccaatgatttgaccggaaatatgggcatagaaaaaacgccagctcatgtgagaatgacgtttttcagaggc......................................................................................................... ..gatactccaatcttttttcttccattgtatctgaaacagtcagaattttccaatgatttgaccggaaatgtgggcatagaaaaaacgccagctcacatgagaatgacgtttttcagaggc......................................................................................................... Subject: NC_008533_SPD_0260_SPD_0261|ribosomal small subunit pseudouridine synthase A:aminopeptidase C|POSITIVE:POSITIVE|[258814,259029]|216 HSP 1 e-value: 3.0E-42 bit: 172.0 Len: 103 Query Start:125 Query End:227 Subject Strand: POSITIVE Subject Start: 10 Subject End: 112 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_0292_SP_0293|bifunctional folate synthesis protein:hypothetical protein|POSITIVE:NEGATIVE|[271230,271378]|149 HSP 1 e-value: 1.0E-41 bit: 170.0 Len: 102 Query Start:126 Query End:227 Subject Strand: NEGATIVE Subject Start: 48 Subject End: 149 .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta Subject: NC_008533_SPD_1158_SPD_1159|NADP-specific glutamate dehydrogenase:hypothetical protein|POSITIVE:NEGATIVE|[1188350,1188844]|495 HSP 1 e-value: 5.0E-41 bit: 168.0 Len: 105 Query Start:123 Query End:227 Subject Strand: POSITIVE Subject Start: 208 Subject End: 312 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagcgagtcgcaggctgtacttgagtacggcaaggcaaagctgacgtggtttgaagagattttcaaagagta Subject: NC_003098_spr1181_spr1182|glutamate dehydrogenase:hypothetical protein|POSITIVE:NEGATIVE|[1180819,1181313]|495 HSP 1 e-value: 5.0E-41 bit: 168.0 Len: 105 Query Start:123 Query End:227 Subject Strand: POSITIVE Subject Start: 208 Subject End: 312 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagcgagtcgcaggctgtacttgagtacggcaaggcaaagctgacgtggtttgaagagattttcaaagagta Subject: NC_003028_SP_1306_SP_1307|glutamate dehydrogenase:hypothetical protein|POSITIVE:NEGATIVE|[1233949,1234453]|505 HSP 1 e-value: 1.0E-38 bit: 161.0 Len: 105 Query Start:123 Query End:227 Subject Strand: POSITIVE Subject Start: 218 Subject End: 322 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagcgagccgcaggctgtacttgagtacggtaaagcaaagctgacgtggtttgaagagattttcaaagagta Subject: NC_003028_SP_1180_SP_1181|ribonucleotide-diphosphate reductase beta subunit:hypothetical protein|POSITIVE:NEGATIVE|[1119540,1119753]|214 HSP 1 e-value: 8.0E-37 bit: 155.0 Len: 105 Query Start:123 Query End:227 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 106 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagta Subject: NC_008533_SPD_0710_SPD_0711|septation ring formation regulator EzrA:hypothetical protein|POSITIVE:POSITIVE|[727105,727897]|793 HSP 1 e-value: 5.0E-35 bit: 149.0 Len: 103 Query Start:125 Query End:227 Subject Strand: NEGATIVE Subject Start: 136 Subject End: 238 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ............................................................................................................................atactaaatgaaaatcaaaaagcaaactaagaagctagcctcaggctgtacttgagtacggtaaggcgacgctgacgtgatttgaagagattttcgaagagta Subject: NC_003028_SP_2183_SP_2184|hypothetical protein:glycerol uptake facilitator protein|NEGATIVE:NEGATIVE|[2101749,2102044]|296 HSP 1 e-value: 3.0E-33 bit: 143.0 Len: 103 Query Start:125 Query End:227 Subject Strand: POSITIVE Subject Start: 189 Subject End: 292 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagta Subject: NC_003028_SP_0280_SP_0281|ribosomal small subunit pseudouridine synthase A:aminopeptidase C|POSITIVE:POSITIVE|[258312,258528]|217 HSP 1 e-value: 3.0E-33 bit: 143.0 Len: 103 Query Start:125 Query End:227 Subject Strand: POSITIVE Subject Start: 10 Subject End: 113 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagta Subject: NC_003028_SP_0807_SP_0809|septation ring formation regulator EzrA:hypothetical protein|POSITIVE:POSITIVE|[764244,764778]|535 HSP 1 e-value: 1.0E-32 bit: 141.0 Len: 103 Query Start:125 Query End:227 Subject Strand: NEGATIVE Subject Start: 136 Subject End: 238 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ............................................................................................................................atactaaatgaaaatcaaaaagcaaactaagaagctagcctcaggctgtacttgagtacggtaaggcgacgctgacgtgatttgaaaagattttcgaagagta Subject: NC_003028_SP_1472_SP_1473|oxidoreductase, putative:hypothetical protein|POSITIVE:NEGATIVE|[1386055,1386276]|222 HSP 1 e-value: 2.0E-31 bit: 137.0 Len: 104 Query Start:124 Query End:227 Subject Strand: POSITIVE Subject Start: 115 Subject End: 219 ...........................................................................................................................tatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ...........................................................................................................................tatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttaagtacggcaaggtgaagctgacgtggtttgaatttgattttcgaagagta Subject: NC_008533_SPD_1551_SPD_1552|prevent-host-death family protein:hypothetical protein|NEGATIVE:NEGATIVE|[1574500,1574730]|231 HSP 1 e-value: 1.0E-29 bit: 131.0 Len: 105 Query Start:123 Query End:227 Subject Strand: POSITIVE Subject Start: 85 Subject End: 190 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgcgatttgaatttgattttcgaagagta Subject: NC_008533_SPD_0546_SPD_0547|branched-chain amino acid transport system II carrier protein:hypothetical protein|POSITIVE:POSITIVE|[559539,559741]|203 HSP 1 e-value: 1.0E-29 bit: 131.0 Len: 105 Query Start:123 Query End:227 Subject Strand: NEGATIVE Subject Start: 8 Subject End: 113 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacgacaaggcgacgttgacgcggtttgaatttgattttcgaagagta Subject: NC_003098_spr1586_spr1587|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1567002,1567199]|198 HSP 1 e-value: 1.0E-29 bit: 131.0 Len: 105 Query Start:123 Query End:227 Subject Strand: POSITIVE Subject Start: 52 Subject End: 157 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgcgatttgaatttgattttcgaagagta Subject: NC_003098_spr0551_spr0552|Branched-chain amino acid transport system carrier protein:hypothetical protein|POSITIVE:POSITIVE|[552009,552211]|203 HSP 1 e-value: 1.0E-29 bit: 131.0 Len: 105 Query Start:123 Query End:227 Subject Strand: NEGATIVE Subject Start: 8 Subject End: 113 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacgacaaggcgacgttgacgcggtttgaatttgattttcgaagagta Subject: NC_003028_SP_1741_SP_1742|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1645558,1645794]|237 HSP 1 e-value: 1.0E-29 bit: 131.0 Len: 105 Query Start:123 Query End:227 Subject Strand: POSITIVE Subject Start: 91 Subject End: 196 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgcgatttgaatttgattttcgaagagta Subject: NC_008533_SPD_0991_SPD_0992|ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[1002301,1002645]|345 HSP 1 e-value: 3.0E-21 bit: 103.0 Len: 103 Query Start:125 Query End:227 Subject Strand: NEGATIVE Subject Start: 146 Subject End: 249 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ............................................................................................................................atactcaatgaaaattaaagtgcaaactaggaagttagccgcaggctgtacttgagtacggcaaggtgaaattgacgtggtttgaatttgattttcgaagagta Subject: NC_003098_spr1014_spr1015|50S ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[994770,995114]|345 HSP 1 e-value: 3.0E-21 bit: 103.0 Len: 103 Query Start:125 Query End:227 Subject Strand: NEGATIVE Subject Start: 146 Subject End: 249 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta ............................................................................................................................atactcaatgaaaattaaagtgcaaactaggaagttagccgcaggctgtacttgagtacggcaaggtgaaattgacgtggtttgaatttgattttcgaagagta Subject: NC_003028_SP_1680_SP_1681|hypothetical protein:sugar ABC transporter, permease protein|NEGATIVE:NEGATIVE|[1579923,1580193]|271 HSP 1 e-value: 6.0E-19 bit: 95.6 Len: 104 Query Start:124 Query End:227 Subject Strand: POSITIVE Subject Start: 168 Subject End: 271 ...........................................................................................................................tatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ...........................................................................................................................tatactcaatgaaaattgaagaacaaactaggaagctaaccgcaggcaatacttaagtatggcaaggtgaagctgacgtagtttgaagagattttcgcagagta Subject: NC_008533_SPD_1663_SPD_1664|alpha,alpha-phosphotrehalase:PTS system, trehalose-specific IIABC components|NEGATIVE:NEGATIVE|[1675447,1675623]|177 HSP 1 e-value: 2.0E-18 bit: 93.7 Len: 47 Query Start:123 Query End:169 Subject Strand: POSITIVE Subject Start: 64 Subject End: 110 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 145 Subject End: 177 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta Subject: NC_003098_spr1698_spr1699|Dextran glucosidase:Phosphotransferase system, trehalose-specific IIBC component|NEGATIVE:NEGATIVE|[1667916,1668092]|177 HSP 1 e-value: 2.0E-18 bit: 93.7 Len: 47 Query Start:123 Query End:169 Subject Strand: POSITIVE Subject Start: 64 Subject End: 110 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 145 Subject End: 177 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta Subject: NC_003098_spr0690_spr0691|hypothetical protein:Biotin synthase|POSITIVE:NEGATIVE|[690651,690853]|203 HSP 1 e-value: 2.0E-18 bit: 93.7 Len: 51 Query Start:122 Query End:172 Subject Strand: NEGATIVE Subject Start: 103 Subject End: 153 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctg....................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 47 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcaaagctgatgcggtttgaagagattttcgaagagta Subject: NC_003028_SP_0782_SP_0783|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[735967,736171]|205 HSP 1 e-value: 2.0E-18 bit: 93.7 Len: 51 Query Start:122 Query End:172 Subject Strand: NEGATIVE Subject Start: 103 Subject End: 153 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctg....................................................... HSP 2 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 47 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcaaagctgacgcggtttgaagagattttcgaagagta Subject: NC_008533_SPD_1193_SPD_1194|peptide methionine sulfoxide reductase msrA/msrB 1:homoserine kinase|NEGATIVE:NEGATIVE|[1222081,1222375]|295 HSP 1 e-value: 1.0E-17 bit: 91.7 Len: 50 Query Start:123 Query End:172 Subject Strand: NEGATIVE Subject Start: 180 Subject End: 229 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctg....................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 35 Query Start:193 Query End:227 Subject Strand: NEGATIVE Subject Start: 33 Subject End: 67 ................................................................................................................................................................................................acgctgacgtggtttgaagagattttcgaagagta ................................................................................................................................................................................................acgctgacgtggtttgaagagattttcgaagagta Subject: NC_003098_spr1217_spr1218|bifunctional methionine sulfoxide reductase A/B protein:homoserine kinase|NEGATIVE:NEGATIVE|[1214550,1214844]|295 HSP 1 e-value: 1.0E-17 bit: 91.7 Len: 50 Query Start:123 Query End:172 Subject Strand: NEGATIVE Subject Start: 180 Subject End: 229 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctg....................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 35 Query Start:193 Query End:227 Subject Strand: NEGATIVE Subject Start: 33 Subject End: 67 ................................................................................................................................................................................................acgctgacgtggtttgaagagattttcgaagagta ................................................................................................................................................................................................acgctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_1359_SP_1360|bifunctional methionine sulfoxide reductase A/B protein:homoserine kinase|NEGATIVE:NEGATIVE|[1281932,1282225]|294 HSP 1 e-value: 1.0E-17 bit: 91.7 Len: 50 Query Start:123 Query End:172 Subject Strand: NEGATIVE Subject Start: 179 Subject End: 228 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctg....................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 35 Query Start:193 Query End:227 Subject Strand: NEGATIVE Subject Start: 33 Subject End: 67 ................................................................................................................................................................................................acgctgacgtggtttgaagagattttcgaagagta ................................................................................................................................................................................................acgctgacgtggtttgaagagattttcgaagagta Subject: NC_008533_SPD_1931_SPD_1932|hypothetical protein:maltodextrin phosphorylase|POSITIVE:NEGATIVE|[1902224,1903267]|1044 HSP 1 e-value: 2.0E-16 bit: 87.7 Len: 48 Query Start:122 Query End:169 Subject Strand: POSITIVE Subject Start: 930 Subject End: 977 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 1012 Subject End: 1044 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta Subject: NC_008533_SPD_1121_SPD_1122|hypothetical protein:DNA processing protein DprA, putative|NEGATIVE:NEGATIVE|[1152536,1153424]|889 HSP 1 e-value: 2.0E-16 bit: 87.7 Len: 48 Query Start:122 Query End:169 Subject Strand: POSITIVE Subject Start: 574 Subject End: 621 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .........................................................................................................................cttatactcaatgaaaatcaaagcgcaaactaggaagctagccacagg.......................................................... HSP 2 e-value: 1.0E-7 bit: 58.0 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 702 Subject End: 734 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtagtttgaagagattttcgaagagta Subject: NC_008533_SPD_1086_SPD_1087|A/G-specific adenine glycosylase:formate--tetrahydrofolate ligase|NEGATIVE:NEGATIVE|[1117070,1117397]|328 HSP 1 e-value: 2.0E-16 bit: 87.7 Len: 48 Query Start:122 Query End:169 Subject Strand: POSITIVE Subject Start: 87 Subject End: 134 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 195 Subject End: 241 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggtgaagctgacgtagtttgaaaagattttcgaagagta Subject: NC_003098_spr1915_spr1916|hypothetical protein:Maltodextrin phosphorylase|POSITIVE:NEGATIVE|[1894692,1895735]|1044 HSP 1 e-value: 2.0E-16 bit: 87.7 Len: 48 Query Start:122 Query End:169 Subject Strand: POSITIVE Subject Start: 930 Subject End: 977 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 1012 Subject End: 1044 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta Subject: NC_003098_spr1143_spr1144|hypothetical protein:DNA processing Smf protein|NEGATIVE:NEGATIVE|[1145384,1145893]|510 HSP 1 e-value: 2.0E-16 bit: 87.7 Len: 48 Query Start:122 Query End:169 Subject Strand: POSITIVE Subject Start: 195 Subject End: 242 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .........................................................................................................................cttatactcaatgaaaatcaaagcgcaaactaggaagctagccacagg.......................................................... HSP 2 e-value: 1.0E-7 bit: 58.0 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 323 Subject End: 355 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtagtttgaagagattttcgaagagta Subject: NC_003098_spr1108_spr1109|Similar to A/G-specific adenine glycosylase:Formate--tetrahydrofolate ligase|NEGATIVE:NEGATIVE|[1109539,1109866]|328 HSP 1 e-value: 2.0E-16 bit: 87.7 Len: 48 Query Start:122 Query End:169 Subject Strand: POSITIVE Subject Start: 87 Subject End: 134 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 2.0E-6 bit: 54.0 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 195 Subject End: 241 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggtgaagctgacgtagtttgaaaagattttcgaagagta Subject: NC_003028_SP_1600_SP_1601|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1504655,1504893]|239 HSP 1 e-value: 2.0E-16 bit: 87.7 Len: 48 Query Start:122 Query End:169 Subject Strand: POSITIVE Subject Start: 124 Subject End: 171 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 2.0E-9 bit: 63.9 Len: 32 Query Start:196 Query End:227 Subject Strand: POSITIVE Subject Start: 208 Subject End: 239 ...................................................................................................................................................................................................ctgacgtggtttgaagagattttcgaagagta ...................................................................................................................................................................................................ctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_1265_SP_1266|hypothetical protein:DNA processing protein DprA, putative|NEGATIVE:NEGATIVE|[1198773,1199283]|511 HSP 1 e-value: 2.0E-16 bit: 87.7 Len: 48 Query Start:122 Query End:169 Subject Strand: POSITIVE Subject Start: 196 Subject End: 243 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .........................................................................................................................cttatactcaatgaaaatcaaagcgcaaactaggaagctagccacagg.......................................................... HSP 2 e-value: 1.0E-7 bit: 58.0 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 324 Subject End: 356 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtagtttgaagagattttcgaagagta Subject: NC_003028_SP_1228_SP_1229|A/G-specific adenine glycosylase:formate--tetrahydrofolate ligase|NEGATIVE:NEGATIVE|[1161361,1161717]|357 HSP 1 e-value: 2.0E-16 bit: 87.7 Len: 48 Query Start:122 Query End:169 Subject Strand: POSITIVE Subject Start: 117 Subject End: 164 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 9.0E-9 bit: 61.9 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 224 Subject End: 270 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggtgaagctgacgtagtttgaagagattttcgaagagta Subject: NC_008533_SPD_1715_SPD_1716|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1714535,1714870]|336 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 51 Query Start:122 Query End:172 Subject Strand: POSITIVE Subject Start: 84 Subject End: 134 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... .........................................................................................................................cttatactcaatgaaaatcaaagaccaaactaggaagctagccgcaggctg....................................................... HSP 2 e-value: 1.0E-7 bit: 58.0 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 211 Subject End: 243 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcaaagagta Subject: NC_008533_SPD_1458_SPD_1459|GTP pyrophosphokinase:metallo-beta-lactamase superfamily protein|NEGATIVE:POSITIVE|[1472689,1473682]|994 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 51 Query Start:123 Query End:173 Subject Strand: POSITIVE Subject Start: 852 Subject End: 902 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgt...................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactagaaagctagccgcaggctgt...................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 294 Subject End: 338 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactaaatgaaaatcaaagagcaaactaggaaactagccgcagg.......................................................... HSP 3 e-value: 9.0E-9 bit: 61.9 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 396 Subject End: 442 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgacgttgacgcggtttgaagagatttttgaagagta Subject: NC_008533_SPD_0549_SPD_0550|lipoprotein, putative:ribosomal protein L11|POSITIVE:POSITIVE|[561971,562278]|308 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 47 Query Start:126 Query End:172 Subject Strand: NEGATIVE Subject Start: 137 Subject End: 183 .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctg....................................................... HSP 2 e-value: 2.0E-12 bit: 73.8 Len: 41 Query Start:187 Query End:227 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 41 ..........................................................................................................................................................................................aaggcaacgctgacgtggtttgaagagattttcgaagagta ..........................................................................................................................................................................................aaggcgacgctgacgtggtttgaagagattttcgaagagta Subject: NC_008533_SPD_0539_SPD_0540|Ser/Thr protein phosphatase family protein:amino acid ABC transporter, amino acid-binding protein, putative|POSITIVE:NEGATIVE|[553789,553969]|181 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 43 Query Start:122 Query End:164 Subject Strand: POSITIVE Subject Start: 67 Subject End: 109 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... HSP 2 e-value: 2.0E-9 bit: 63.9 Len: 32 Query Start:195 Query End:226 Subject Strand: POSITIVE Subject Start: 149 Subject End: 180 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagt. ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagt. Subject: NC_008533_SPD_0409_SPD_0410|threonine dehydratase:hypothetical protein|POSITIVE:POSITIVE|[410381,411114]|734 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 43 Query Start:122 Query End:164 Subject Strand: NEGATIVE Subject Start: 146 Subject End: 188 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... HSP 2 e-value: 1.0E-7 bit: 58.0 Len: 29 Query Start:199 Query End:227 Subject Strand: NEGATIVE Subject Start: 74 Subject End: 102 ......................................................................................................................................................................................................acgtggtttgaagagattttcgaagagta ......................................................................................................................................................................................................acgtggtttgaagagattttcgaagagta Subject: NC_003098_spr1924_spr1925|aspartyl-tRNA synthetase:hypothetical protein|NEGATIVE:NEGATIVE|[1908629,1908979]|351 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 47 Query Start:123 Query End:169 Subject Strand: NEGATIVE Subject Start: 273 Subject End: 319 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 123 Subject End: 169 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta Subject: NC_003098_spr1728_spr1729|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1707004,1707339]|336 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 51 Query Start:122 Query End:172 Subject Strand: POSITIVE Subject Start: 84 Subject End: 134 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... .........................................................................................................................cttatactcaatgaaaatcaaagaccaaactaggaagctagccgcaggctg....................................................... HSP 2 e-value: 1.0E-7 bit: 58.0 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 211 Subject End: 243 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcaaagagta Subject: NC_003098_spr0696_spr0697|methionine--tRNA ligase:hypothetical protein|POSITIVE:POSITIVE|[698465,698791]|327 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 47 Query Start:123 Query End:169 Subject Strand: POSITIVE Subject Start: 41 Subject End: 87 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 9.0E-9 bit: 61.9 Len: 31 Query Start:197 Query End:227 Subject Strand: POSITIVE Subject Start: 207 Subject End: 237 ....................................................................................................................................................................................................tgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................................tgacgtggtttgaagagattttcgaagagta Subject: NC_003098_spr0554_spr0555|hypothetical protein:50S ribosomal protein L11|POSITIVE:POSITIVE|[554441,554748]|308 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 47 Query Start:126 Query End:172 Subject Strand: NEGATIVE Subject Start: 137 Subject End: 183 .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctg....................................................... HSP 2 e-value: 2.0E-12 bit: 73.8 Len: 41 Query Start:187 Query End:227 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 41 ..........................................................................................................................................................................................aaggcaacgctgacgtggtttgaagagattttcgaagagta ..........................................................................................................................................................................................aaggcgacgctgacgtggtttgaagagattttcgaagagta Subject: NC_003098_spr0544_spr0545|hypothetical protein:ABC transporter substrate-binding protein - glutamine transport/Major cell binding factor precursor|POSITIVE:NEGATIVE|[546259,546439]|181 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 43 Query Start:122 Query End:164 Subject Strand: POSITIVE Subject Start: 67 Subject End: 109 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... HSP 2 e-value: 2.0E-9 bit: 63.9 Len: 32 Query Start:195 Query End:226 Subject Strand: POSITIVE Subject Start: 149 Subject End: 180 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagt. ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagt. Subject: NC_003098_spr0406_spr0407|threonine dehydratase:hypothetical protein|POSITIVE:POSITIVE|[402852,403585]|734 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 43 Query Start:122 Query End:164 Subject Strand: NEGATIVE Subject Start: 146 Subject End: 188 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... HSP 2 e-value: 1.0E-7 bit: 58.0 Len: 29 Query Start:199 Query End:227 Subject Strand: NEGATIVE Subject Start: 74 Subject End: 102 ......................................................................................................................................................................................................acgtggtttgaagagattttcgaagagta ......................................................................................................................................................................................................acgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_2153_SP_2156|hypothetical protein:SPFH domain/Band 7 family|POSITIVE:NEGATIVE|[2068633,2069965]|1333 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 1279 Subject End: 1325 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgacgctgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 9.0E-12 bit: 71.9 Len: 44 Query Start:126 Query End:169 Subject Strand: POSITIVE Subject Start: 1133 Subject End: 1176 .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .............................................................................................................................tactcaatgaaaatcaaagagcaaattaggaaactagccacagg.......................................................... Subject: NC_003028_SP_2114_SP_2115|aspartyl-tRNA synthetase:hypothetical protein|NEGATIVE:NEGATIVE|[2029292,2029642]|351 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 47 Query Start:123 Query End:169 Subject Strand: NEGATIVE Subject Start: 273 Subject End: 319 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 123 Subject End: 169 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_2105_SP_2106|hypothetical protein:glycogen phosphorylase family protein|POSITIVE:NEGATIVE|[2015357,2016398]|1042 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 43 Query Start:122 Query End:164 Subject Strand: POSITIVE Subject Start: 929 Subject End: 971 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 1010 Subject End: 1042 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_1912_SP_1914|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1824972,1825659]|688 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 51 Query Start:122 Query End:172 Subject Strand: POSITIVE Subject Start: 84 Subject End: 134 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... .........................................................................................................................cttatactcaatgaaaatcaaagaccaaactaggaagctagccgcaggctg....................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 211 Subject End: 243 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_1883_SP_1884|dextran glucosidase DexS, putative:trehalose PTS system, IIABC components|NEGATIVE:NEGATIVE|[1786505,1786681]|177 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 47 Query Start:123 Query End:169 Subject Strand: POSITIVE Subject Start: 64 Subject End: 110 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagaacaaactaggaagctagccacagg.......................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 145 Subject End: 177 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_1645_SP_1646|GTP pyrophosphokinase:metallo-beta-lactamase superfamily protein|NEGATIVE:POSITIVE|[1543974,1544931]|958 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 51 Query Start:123 Query End:173 Subject Strand: POSITIVE Subject Start: 816 Subject End: 866 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgt...................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactagaaagctagccgcaggctgt...................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 294 Subject End: 338 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactaaatgaaaatcaaagagcaaactaggaaactagccgcagg.......................................................... HSP 3 e-value: 2.0E-6 bit: 54.0 Len: 31 Query Start:197 Query End:227 Subject Strand: POSITIVE Subject Start: 899 Subject End: 929 ....................................................................................................................................................................................................tgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................................tgacgcggtttgaagagattttcgaagagta Subject: NC_003028_SP_1516_SP_1517|acetyltransferase, GNAT family:transcription elongation factor GreA|NEGATIVE:NEGATIVE|[1424331,1424807]|477 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 374 Subject End: 420 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgacgctgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 91 Subject End: 135 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaataaaaatcaaagagcaaactaggaaactagccgcagg.......................................................... Subject: NC_003028_SP_0788_SP_0789|methionine--tRNA ligase:hypothetical protein|POSITIVE:POSITIVE|[743783,744247]|465 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 47 Query Start:123 Query End:169 Subject Strand: POSITIVE Subject Start: 41 Subject End: 87 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 35 Query Start:193 Query End:227 Subject Strand: POSITIVE Subject Start: 338 Subject End: 372 ................................................................................................................................................................................................acgctgacgtggtttgaagagattttcgaagagta ................................................................................................................................................................................................acgctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_0629_SP_0630|hypothetical protein:50S ribosomal protein L11|POSITIVE:POSITIVE|[596487,596794]|308 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 47 Query Start:126 Query End:172 Subject Strand: NEGATIVE Subject Start: 137 Subject End: 183 .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctg....................................................... HSP 2 e-value: 2.0E-12 bit: 73.8 Len: 41 Query Start:187 Query End:227 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 41 ..........................................................................................................................................................................................aaggcaacgctgacgtggtttgaagagattttcgaagagta ..........................................................................................................................................................................................aaggcgacgctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_0619_SP_0620|hypothetical protein:amino acid ABC transporter, amino acid-binding protein, putative|POSITIVE:NEGATIVE|[588415,588595]|181 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 43 Query Start:122 Query End:164 Subject Strand: POSITIVE Subject Start: 67 Subject End: 109 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... HSP 2 e-value: 2.0E-9 bit: 63.9 Len: 32 Query Start:195 Query End:226 Subject Strand: POSITIVE Subject Start: 149 Subject End: 180 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagt. ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagt. Subject: NC_003028_SP_0450_SP_0451|threonine dehydratase:hypothetical protein|POSITIVE:POSITIVE|[422944,423677]|734 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 43 Query Start:122 Query End:164 Subject Strand: NEGATIVE Subject Start: 146 Subject End: 188 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... HSP 2 e-value: 1.0E-7 bit: 58.0 Len: 29 Query Start:199 Query End:227 Subject Strand: NEGATIVE Subject Start: 74 Subject End: 102 ......................................................................................................................................................................................................acgtggtttgaagagattttcgaagagta ......................................................................................................................................................................................................acgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_0387_SP_0389|DNA-binding response regulator:hypothetical protein|POSITIVE:POSITIVE|[367533,368450]|918 HSP 1 e-value: 6.0E-16 bit: 85.7 Len: 47 Query Start:123 Query End:169 Subject Strand: NEGATIVE Subject Start: 460 Subject End: 506 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 33 Query Start:195 Query End:227 Subject Strand: NEGATIVE Subject Start: 393 Subject End: 425 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta Subject: NC_008533_SPD_1968_SPD_1969|hypothetical protein:glycosyl hydrolase-related protein|NEGATIVE:NEGATIVE|[1937077,1937401]|325 HSP 1 e-value: 2.0E-15 bit: 83.8 Len: 50 Query Start:123 Query End:172 Subject Strand: POSITIVE Subject Start: 211 Subject End: 260 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagctgcaggctg....................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 293 Subject End: 325 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta Subject: NC_008533_SPD_0527_SPD_0528|oxidoreductase, putative:amino acid ABC transporter, permease protein|NEGATIVE:NEGATIVE|[539375,539631]|257 HSP 1 e-value: 2.0E-15 bit: 83.8 Len: 42 Query Start:123 Query End:164 Subject Strand: POSITIVE Subject Start: 144 Subject End: 185 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... HSP 2 e-value: 2.0E-9 bit: 63.9 Len: 32 Query Start:195 Query End:226 Subject Strand: POSITIVE Subject Start: 225 Subject End: 256 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagt. ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagt. Subject: NC_008533_SPD_0353_SPD_0355|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[356986,357757]|772 HSP 1 e-value: 2.0E-15 bit: 83.8 Len: 42 Query Start:123 Query End:164 Subject Strand: NEGATIVE Subject Start: 319 Subject End: 360 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 33 Query Start:195 Query End:227 Subject Strand: NEGATIVE Subject Start: 247 Subject End: 279 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta Subject: NC_003098_spr1948_spr1949|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1929575,1929899]|325 HSP 1 e-value: 2.0E-15 bit: 83.8 Len: 50 Query Start:123 Query End:172 Subject Strand: POSITIVE Subject Start: 211 Subject End: 260 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagctgcaggctg....................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 293 Subject End: 325 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta Subject: NC_003098_spr0531_spr0532|hypothetical protein:ABC transporter membrane-spanning permease - glutamine transport|NEGATIVE:NEGATIVE|[531857,532101]|245 HSP 1 e-value: 2.0E-15 bit: 83.8 Len: 42 Query Start:123 Query End:164 Subject Strand: POSITIVE Subject Start: 132 Subject End: 173 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... HSP 2 e-value: 2.0E-9 bit: 63.9 Len: 32 Query Start:195 Query End:226 Subject Strand: POSITIVE Subject Start: 213 Subject End: 244 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagt. ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagt. Subject: NC_003028_SP_1717_SP_1718|ABC transporter, ATP-binding protein:hypothetical protein|NEGATIVE:NEGATIVE|[1621815,1622204]|390 HSP 1 e-value: 2.0E-15 bit: 83.8 Len: 42 Query Start:123 Query End:164 Subject Strand: POSITIVE Subject Start: 114 Subject End: 155 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... HSP 2 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 264 Subject End: 310 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgaagctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_0606_SP_0607|oxidoreductase, putative:amino acid ABC transporter, permease protein|NEGATIVE:NEGATIVE|[574009,574253]|245 HSP 1 e-value: 2.0E-15 bit: 83.8 Len: 42 Query Start:123 Query End:164 Subject Strand: POSITIVE Subject Start: 132 Subject End: 173 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... HSP 2 e-value: 2.0E-9 bit: 63.9 Len: 32 Query Start:195 Query End:226 Subject Strand: POSITIVE Subject Start: 213 Subject End: 244 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagt. ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagt. Subject: NC_003028_SP_0033_SP_0034|hypothetical protein:membrane protein|POSITIVE:NEGATIVE|[34691,35008]|318 HSP 1 e-value: 2.0E-15 bit: 83.8 Len: 50 Query Start:123 Query End:172 Subject Strand: POSITIVE Subject Start: 32 Subject End: 81 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccacgggctg....................................................... HSP 2 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 272 Subject End: 318 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgacgttgacgtggtttgaagagattttcgaagagta Subject: NC_008533_SPD_0790_SPD_0791|pyruvate kinase:hypothetical protein|POSITIVE:NEGATIVE|[809280,810395]|1116 HSP 1 e-value: 9.0E-15 bit: 81.8 Len: 45 Query Start:125 Query End:169 Subject Strand: NEGATIVE Subject Start: 207 Subject End: 251 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 103 Subject End: 149 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta Subject: NC_008533_SPD_0486_SPD_0487|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[494216,494515]|300 HSP 1 e-value: 9.0E-15 bit: 81.8 Len: 45 Query Start:125 Query End:169 Subject Strand: NEGATIVE Subject Start: 245 Subject End: 289 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 33 Query Start:195 Query End:227 Subject Strand: NEGATIVE Subject Start: 96 Subject End: 128 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta Subject: NC_003098_spr1081_spr1082|hypothetical protein:GTP-binding protein LepA|NEGATIVE:NEGATIVE|[1076753,1077368]|616 HSP 1 e-value: 9.0E-15 bit: 81.8 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 377 Subject End: 421 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 2.0E-12 bit: 73.8 Len: 41 Query Start:187 Query End:227 Subject Strand: POSITIVE Subject Start: 486 Subject End: 526 ..........................................................................................................................................................................................aaggcaacgctgacgtggtttgaagagattttcgaagagta ..........................................................................................................................................................................................aaggcgacgctgacgtggtttgaagagattttcgaagagta Subject: NC_003098_spr0797_spr0798|pyruvate kinase:hypothetical protein|POSITIVE:NEGATIVE|[801749,802864]|1116 HSP 1 e-value: 9.0E-15 bit: 81.8 Len: 45 Query Start:125 Query End:169 Subject Strand: NEGATIVE Subject Start: 207 Subject End: 251 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 103 Subject End: 149 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta Subject: NC_003098_spr0484_spr0485|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[486549,486985]|437 HSP 1 e-value: 9.0E-15 bit: 81.8 Len: 45 Query Start:125 Query End:169 Subject Strand: NEGATIVE Subject Start: 382 Subject End: 426 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 33 Query Start:195 Query End:227 Subject Strand: NEGATIVE Subject Start: 233 Subject End: 265 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_2140_SP_2141|hypothetical protein:glycosyl hydrolase-related protein|NEGATIVE:NEGATIVE|[2050421,2050571]|151 HSP 1 e-value: 9.0E-15 bit: 81.8 Len: 41 Query Start:123 Query End:163 Subject Strand: POSITIVE Subject Start: 37 Subject End: 77 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagc................................................................ ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagc................................................................ HSP 2 e-value: 3.0E-8 bit: 60.0 Len: 30 Query Start:195 Query End:224 Subject Strand: POSITIVE Subject Start: 119 Subject End: 148 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaaga... ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaaga... Subject: NC_003028_SP_0897_SP_0899|pyruvate kinase:hypothetical protein|POSITIVE:POSITIVE|[852843,854645]|1803 HSP 1 e-value: 9.0E-15 bit: 81.8 Len: 45 Query Start:125 Query End:169 Subject Strand: NEGATIVE Subject Start: 203 Subject End: 247 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 99 Subject End: 145 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_0560_SP_0561|hypothetical protein:hypothetical protein|NEGATIVE:POSITIVE|[528030,528290]|261 HSP 1 e-value: 9.0E-15 bit: 81.8 Len: 45 Query Start:125 Query End:169 Subject Strand: NEGATIVE Subject Start: 206 Subject End: 250 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 33 Query Start:195 Query End:227 Subject Strand: NEGATIVE Subject Start: 57 Subject End: 89 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta Subject: NC_008533_SPD_1408_SPD_1409|hypothetical protein:sugar ABC transporter, ATP-binding protein|NEGATIVE:NEGATIVE|[1427612,1428111]|500 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 48 Query Start:180 Query End:227 Subject Strand: POSITIVE Subject Start: 303 Subject End: 350 ...................................................................................................................................................................................gtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ...................................................................................................................................................................................gtacggcaaggcgacgttgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 2.0E-9 bit: 63.9 Len: 40 Query Start:125 Query End:164 Subject Strand: POSITIVE Subject Start: 201 Subject End: 240 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... ............................................................................................................................atactcaatggaaatcaaagagcaaactaggaaactagcc............................................................... Subject: NC_008533_SPD_1201_SPD_1202|phosphotransferase LicD3:Psr protein|NEGATIVE:NEGATIVE|[1231002,1231279]|278 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 48 Query Start:125 Query End:172 Subject Strand: NEGATIVE Subject Start: 227 Subject End: 274 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ............................................................................................................................atactcaatgaaaatcaaagtgcaaactaggaagctagccgcaggctg....................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 124 Subject End: 170 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagta Subject: NC_008533_SPD_0652_SPD_0653|branched-chain amino acid ABC transporter, amino acid-binding protein:branched-chain amino acid ABC transporter, permease protein|POSITIVE:POSITIVE|[671147,671413]|267 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 48 Query Start:122 Query End:169 Subject Strand: NEGATIVE Subject Start: 163 Subject End: 210 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaaactagccgcagg.......................................................... HSP 2 e-value: 8.0E-6 bit: 52.0 Len: 42 Query Start:186 Query End:227 Subject Strand: NEGATIVE Subject Start: 59 Subject End: 100 .........................................................................................................................................................................................caaggcaacgctgacgtggtttgaagagattttcgaagagta .........................................................................................................................................................................................caaggcgacgttgacgcagtttgaagagattttcgaagagta Subject: NC_003098_spr1709_spr1710|Dextransucrase (sucrose 6-glucosyltransferase):ABC transporter membrane spanning permease - multiple sugars|NEGATIVE:NEGATIVE|[1682434,1682790]|357 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 44 Query Start:126 Query End:169 Subject Strand: NEGATIVE Subject Start: 314 Subject End: 357 .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 209 Subject End: 255 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagta Subject: NC_003098_spr1638_spr1639|hypothetical protein:Catabolite control protein|NEGATIVE:NEGATIVE|[1611092,1611987]|896 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 48 Query Start:125 Query End:172 Subject Strand: NEGATIVE Subject Start: 249 Subject End: 296 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctg....................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 102 Subject End: 148 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgacgttgacgcggtttgaagagattttcgaagagta Subject: NC_003098_spr1436_spr1437|hypothetical protein:ABC transporter ATP-binding protein - multiple sugar transport|NEGATIVE:NEGATIVE|[1420081,1420580]|500 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 48 Query Start:180 Query End:227 Subject Strand: POSITIVE Subject Start: 303 Subject End: 350 ...................................................................................................................................................................................gtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ...................................................................................................................................................................................gtacggcaaggcgacgttgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 2.0E-9 bit: 63.9 Len: 40 Query Start:125 Query End:164 Subject Strand: POSITIVE Subject Start: 201 Subject End: 240 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... ............................................................................................................................atactcaatggaaatcaaagagcaaactaggaaactagcc............................................................... Subject: NC_003098_spr1368_spr1369|hypothetical protein:transcription elongation factor GreA|NEGATIVE:NEGATIVE|[1350306,1350773]|468 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 44 Query Start:181 Query End:224 Subject Strand: POSITIVE Subject Start: 365 Subject End: 408 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaaga... ....................................................................................................................................................................................tacggcaaggcgacgctgacgtggtttgaagagattttcgaaga... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 37 Subject End: 81 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaataaaaatcaaagagcaaactaggaaactagccgcagg.......................................................... Subject: NC_003098_spr1225_spr1226|LicD1 paralog:hypothetical protein|NEGATIVE:NEGATIVE|[1223471,1223748]|278 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 48 Query Start:125 Query End:172 Subject Strand: NEGATIVE Subject Start: 227 Subject End: 274 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ............................................................................................................................atactcaatgaaaatcaaagtgcaaactaggaagctagccgcaggctg....................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 124 Subject End: 170 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagta Subject: NC_003098_spr0659_spr0660|ABC transporter substrate-binding protein - branched chain amino acid transport:ABC transporter membrane-spanning permease - branched chain amino acid transport|POSITIVE:POSITIVE|[663616,663873]|258 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 48 Query Start:122 Query End:169 Subject Strand: NEGATIVE Subject Start: 163 Subject End: 210 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaaactagccgcagg.......................................................... HSP 2 e-value: 8.0E-6 bit: 52.0 Len: 42 Query Start:186 Query End:227 Subject Strand: NEGATIVE Subject Start: 59 Subject End: 100 .........................................................................................................................................................................................caaggcaacgctgacgtggtttgaagagattttcgaagagta .........................................................................................................................................................................................caaggcgacgttgacgcagtttgaagagattttcgaagagta Subject: NC_003028_SP_1894_SP_1895|sucrose phosphorylase:sugar ABC transporter, permease protein|NEGATIVE:NEGATIVE|[1801040,1801396]|357 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 44 Query Start:126 Query End:169 Subject Strand: NEGATIVE Subject Start: 314 Subject End: 357 .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 209 Subject End: 255 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_1840_SP_1841|ABC transporter, ATP-binding/permease protein:hypothetical protein|NEGATIVE:NEGATIVE|[1751943,1752147]|205 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 48 Query Start:125 Query End:172 Subject Strand: POSITIVE Subject Start: 39 Subject End: 86 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctg....................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 141 Subject End: 187 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgacgttgacgcggtttgaagagattttcgaagagta Subject: NC_003028_SP_1696_SP_1697|hypothetical protein:ATP-dependent DNA helicase RecG|NEGATIVE:NEGATIVE|[1600719,1600952]|234 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 40 Query Start:122 Query End:161 Subject Strand: NEGATIVE Subject Start: 178 Subject End: 217 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagcta.................................................................. .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagcta.................................................................. HSP 2 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 19 Subject End: 65 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_1579_SP_1580|hypothetical protein:sugar ABC transporter, ATP-binding protein|NEGATIVE:NEGATIVE|[1484730,1485134]|405 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 48 Query Start:180 Query End:227 Subject Strand: POSITIVE Subject Start: 208 Subject End: 255 ...................................................................................................................................................................................gtacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ...................................................................................................................................................................................gtacggcaaggcgacgttgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 2.0E-9 bit: 63.9 Len: 40 Query Start:125 Query End:164 Subject Strand: POSITIVE Subject Start: 106 Subject End: 145 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... ............................................................................................................................atactcaatggaaatcaaagagcaaactaggaaactagcc............................................................... Subject: NC_003028_SP_1367_SP_1368|licD3 protein:psr protein|NEGATIVE:NEGATIVE|[1290910,1291187]|278 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 48 Query Start:125 Query End:172 Subject Strand: NEGATIVE Subject Start: 227 Subject End: 274 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ............................................................................................................................atactcaatgaaaatcaaagtgcaaactaggaagctagccgcaggctg....................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 124 Subject End: 170 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_1199_SP_1200|hypothetical protein:GTP-binding protein LepA|NEGATIVE:NEGATIVE|[1132042,1132583]|542 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 40 Query Start:125 Query End:164 Subject Strand: POSITIVE Subject Start: 260 Subject End: 299 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... HSP 2 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 406 Subject End: 452 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_0749_SP_0750|branched-chain amino acid ABC transporter, amino acid-binding protein:branched-chain amino acid ABC transporter, permease protein|POSITIVE:POSITIVE|[709061,709327]|267 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 48 Query Start:122 Query End:169 Subject Strand: NEGATIVE Subject Start: 163 Subject End: 210 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaaactagccgcagg.......................................................... HSP 2 e-value: 8.0E-6 bit: 52.0 Len: 42 Query Start:186 Query End:227 Subject Strand: NEGATIVE Subject Start: 59 Subject End: 100 .........................................................................................................................................................................................caaggcaacgctgacgtggtttgaagagattttcgaagagta .........................................................................................................................................................................................caaggcgacgttgacgcagtttgaagagattttcgaagagta Subject: NC_003028_SP_0482_SP_0483|hypothetical protein:ABC transporter, ATP-binding protein|POSITIVE:POSITIVE|[463540,463904]|365 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 44 Query Start:126 Query End:169 Subject Strand: POSITIVE Subject Start: 1 Subject End: 44 .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 148 Subject End: 194 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgaagctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_0120_SP_0121|glucose-inhibited division protein A:metallo-beta-lactamase superfamily protein|POSITIVE:NEGATIVE|[124699,125050]|352 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 40 Query Start:125 Query End:164 Subject Strand: NEGATIVE Subject Start: 249 Subject End: 288 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 139 Subject End: 185 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgacgttgacgcggtttgaagagattttcgaagagta Subject: NC_003028_SP_0095_SP_0096|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[97857,98130]|274 HSP 1 e-value: 4.0E-14 bit: 79.8 Len: 48 Query Start:125 Query End:172 Subject Strand: POSITIVE Subject Start: 53 Subject End: 100 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagctgcaggctg....................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 157 Subject End: 203 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgaagctgacgcggtttgaagagattttcgaagagta Subject: NC_008533_SPD_0622_SPD_0623|transcriptional regulator, TENA/THI-4 family protein, putative:hydroxyethylthiazole kinase|POSITIVE:POSITIVE|[644856,645143]|288 HSP 1 e-value: 1.0E-13 bit: 77.8 Len: 39 Query Start:123 Query End:161 Subject Strand: NEGATIVE Subject Start: 157 Subject End: 195 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagcta.................................................................. ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagcta.................................................................. HSP 2 e-value: 9.0E-9 bit: 61.9 Len: 31 Query Start:196 Query End:226 Subject Strand: NEGATIVE Subject Start: 38 Subject End: 68 ...................................................................................................................................................................................................ctgacgtggtttgaagagattttcgaagagt. ...................................................................................................................................................................................................ctgacgtggtttgaagagattttcgaagagt. Subject: NC_008533_SPD_0573_SPD_0574|peptide methionine sulfoxide reductase msrA/msrB 2:DNA-binding response regulator|POSITIVE:POSITIVE|[595585,595851]|267 HSP 1 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 47 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 2.0E-9 bit: 63.9 Len: 48 Query Start:122 Query End:169 Subject Strand: NEGATIVE Subject Start: 151 Subject End: 198 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .........................................................................................................................cttatactcaataaaaatcaaaaagtaaactaggaagatagccacagg.......................................................... Subject: NC_008533_SPD_0569_SPD_0570|sodium/hydrogen exchanger family protein:ribonuclease BN, putative|POSITIVE:POSITIVE|[591916,592093]|178 HSP 1 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 5 Subject End: 51 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 1.0E-13 bit: 77.8 Len: 43 Query Start:122 Query End:164 Subject Strand: NEGATIVE Subject Start: 114 Subject End: 156 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactagaaagctagcc............................................................... Subject: NC_008533_SPD_0099_SPD_0101|capsular polysaccharide biosynthesis protein:hydrolase, haloacid dehalogenase-like family protein|POSITIVE:NEGATIVE|[101068,101462]|395 HSP 1 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 68 Subject End: 114 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgacgttgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 39 Query Start:125 Query End:163 Subject Strand: NEGATIVE Subject Start: 315 Subject End: 353 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagc................................................................ ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagc................................................................ Subject: NC_003098_spr1961_spr1962|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1948666,1949303]|638 HSP 1 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:123 Query End:169 Subject Strand: POSITIVE Subject Start: 435 Subject End: 481 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagctacagg.......................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 584 Subject End: 630 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaagacgacgctgacgtagtttgaagagattttcgaagagta Subject: NC_003098_spr1922_spr1923|Maltose operon transcriptional repressor:hypothetical protein|POSITIVE:NEGATIVE|[1905655,1905945]|291 HSP 1 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:123 Query End:169 Subject Strand: POSITIVE Subject Start: 133 Subject End: 179 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagtgcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 238 Subject End: 284 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaaaagta Subject: NC_003098_spr0628_spr0629|hypothetical protein:hydroxyethylthiazole kinase|POSITIVE:POSITIVE|[637325,637591]|267 HSP 1 e-value: 1.0E-13 bit: 77.8 Len: 39 Query Start:123 Query End:161 Subject Strand: NEGATIVE Subject Start: 157 Subject End: 195 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagcta.................................................................. ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagcta.................................................................. HSP 2 e-value: 9.0E-9 bit: 61.9 Len: 31 Query Start:196 Query End:226 Subject Strand: NEGATIVE Subject Start: 38 Subject End: 68 ...................................................................................................................................................................................................ctgacgtggtttgaagagattttcgaagagt. ...................................................................................................................................................................................................ctgacgtggtttgaagagattttcgaagagt. Subject: NC_003098_spr0577_spr0578|bifunctional methionine sulfoxide reductase A/B protein:Response regulator|POSITIVE:POSITIVE|[588054,588302]|249 HSP 1 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 47 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 2.0E-9 bit: 63.9 Len: 48 Query Start:122 Query End:169 Subject Strand: NEGATIVE Subject Start: 151 Subject End: 198 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .........................................................................................................................cttatactcaataaaaatcaaaaagtaaactaggaagatagccacagg.......................................................... Subject: NC_003098_spr0573_spr0574|Na+/H+ antiporter:hypothetical protein|POSITIVE:POSITIVE|[584385,584547]|163 HSP 1 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 5 Subject End: 51 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 1.0E-13 bit: 77.8 Len: 43 Query Start:122 Query End:164 Subject Strand: NEGATIVE Subject Start: 114 Subject End: 156 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactagaaagctagcc............................................................... Subject: NC_003098_spr0092_spr0093|CapD protein, required for the biosynthesis of type 1 capsular polysaccharide:Phosphoglycolate phosphatase|POSITIVE:NEGATIVE|[101068,101462]|395 HSP 1 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 68 Subject End: 114 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgacgttgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 39 Query Start:125 Query End:163 Subject Strand: NEGATIVE Subject Start: 315 Subject End: 353 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagc................................................................ ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagc................................................................ Subject: NC_003028_SP_2112_SP_2113|maltose operon transcriptional repressor:hypothetical protein|POSITIVE:NEGATIVE|[2026318,2026608]|291 HSP 1 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:123 Query End:169 Subject Strand: POSITIVE Subject Start: 133 Subject End: 179 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagtgcaaactaggaagctagccgcagg.......................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 238 Subject End: 284 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_0660_SP_0661|bifunctional methionine sulfoxide reductase A/B protein:DNA-binding response regulator|POSITIVE:POSITIVE|[631388,631654]|267 HSP 1 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 47 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 2.0E-9 bit: 63.9 Len: 48 Query Start:122 Query End:169 Subject Strand: NEGATIVE Subject Start: 151 Subject End: 198 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .........................................................................................................................cttatactcaataaaaatcaaaaagtaaactaggaagatagccacagg.......................................................... Subject: NC_003028_SP_0655_SP_0657|sodium/hydrogen exchanger family protein:ribonuclease BN, putative|POSITIVE:POSITIVE|[627719,627896]|178 HSP 1 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 5 Subject End: 51 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggtaaggcgacgctgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 1.0E-13 bit: 77.8 Len: 43 Query Start:122 Query End:164 Subject Strand: NEGATIVE Subject Start: 114 Subject End: 156 .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... .........................................................................................................................cttatactcaatgaaaatcaaagagcaaactagaaagctagcc............................................................... Subject: NC_003028_SP_0103_SP_0104|capsular polysaccharide biosynthesis protein, putative:hydrolase, haloacid dehalogenase-like family|POSITIVE:NEGATIVE|[106519,106955]|437 HSP 1 e-value: 1.0E-13 bit: 77.8 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 68 Subject End: 114 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgacgttgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 39 Query Start:125 Query End:163 Subject Strand: NEGATIVE Subject Start: 357 Subject End: 395 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagc................................................................ ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagc................................................................ Subject: NC_008533_SPD_1528_SPD_1530|ABC transporter, ATP-binding protein:hypothetical protein|NEGATIVE:POSITIVE|[1550754,1552061]|1308 HSP 1 e-value: 6.0E-13 bit: 75.8 Len: 46 Query Start:182 Query End:227 Subject Strand: POSITIVE Subject Start: 264 Subject End: 309 .....................................................................................................................................................................................acggcaaggcaacgctgacgtggtttgaagagattttcgaagagta .....................................................................................................................................................................................acggcaaggcgaagctgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 1.0E-10 bit: 67.9 Len: 42 Query Start:123 Query End:164 Subject Strand: POSITIVE Subject Start: 113 Subject End: 154 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... ..........................................................................................................................ttatactcaatgaaaagcaaagagcgaactaggaagctagcc............................................................... Subject: NC_008533_SPD_1419_SPD_1422|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[1439453,1441070]|1618 HSP 1 e-value: 6.0E-13 bit: 75.8 Len: 50 Query Start:123 Query End:172 Subject Strand: POSITIVE Subject Start: 1504 Subject End: 1553 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagtgcaaactagaaagctagccgcaggctg....................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 1586 Subject End: 1618 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta Subject: NC_008533_SPD_0556_SPD_0558|hypothetical protein:cell wall-associated serine protease PrtA|POSITIVE:POSITIVE|[568719,569947]|1229 HSP 1 e-value: 6.0E-13 bit: 75.8 Len: 46 Query Start:182 Query End:227 Subject Strand: NEGATIVE Subject Start: 811 Subject End: 856 .....................................................................................................................................................................................acggcaaggcaacgctgacgtggtttgaagagattttcgaagagta .....................................................................................................................................................................................acggcaaggcgacgttgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 9.0E-12 bit: 71.9 Len: 44 Query Start:126 Query End:169 Subject Strand: NEGATIVE Subject Start: 961 Subject End: 1004 .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaaactagccgcagg.......................................................... Subject: NC_008533_SPD_0039_SPD_0040|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[34462,34651]|190 HSP 1 e-value: 6.0E-13 bit: 75.8 Len: 46 Query Start:181 Query End:226 Subject Strand: POSITIVE Subject Start: 144 Subject End: 189 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagt. ....................................................................................................................................................................................tacggcaaggcgacgttgacgtggtttgaagagattttcgaagagt. HSP 2 e-value: 5.0E-7 bit: 56.0 Len: 32 Query Start:123 Query End:154 Subject Strand: POSITIVE Subject Start: 32 Subject End: 63 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactag......................................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcacactag......................................................................... Subject: NC_003098_spr0560_spr0561|hypothetical protein:Cell wall-associated serine proteinase precursor PrtA|POSITIVE:POSITIVE|[561687,562417]|731 HSP 1 e-value: 6.0E-13 bit: 75.8 Len: 46 Query Start:182 Query End:227 Subject Strand: NEGATIVE Subject Start: 313 Subject End: 358 .....................................................................................................................................................................................acggcaaggcaacgctgacgtggtttgaagagattttcgaagagta .....................................................................................................................................................................................acggcaaggcgacgttgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 9.0E-12 bit: 71.9 Len: 44 Query Start:126 Query End:169 Subject Strand: NEGATIVE Subject Start: 463 Subject End: 506 .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaaactagccgcagg.......................................................... Subject: NC_003098_spr0033_spr0034|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[34462,34651]|190 HSP 1 e-value: 6.0E-13 bit: 75.8 Len: 46 Query Start:181 Query End:226 Subject Strand: POSITIVE Subject Start: 144 Subject End: 189 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagt. ....................................................................................................................................................................................tacggcaaggcgacgttgacgtggtttgaagagattttcgaagagt. HSP 2 e-value: 5.0E-7 bit: 56.0 Len: 32 Query Start:123 Query End:154 Subject Strand: POSITIVE Subject Start: 32 Subject End: 63 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactag......................................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcacactag......................................................................... Subject: NC_003028_SP_1694_SP_1695|hypothetical protein:acetyl xylan esterase, putative|NEGATIVE:NEGATIVE|[1598698,1599457]|760 HSP 1 e-value: 6.0E-13 bit: 75.8 Len: 42 Query Start:123 Query End:164 Subject Strand: POSITIVE Subject Start: 284 Subject End: 325 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaagaagctagcc............................................................... HSP 2 e-value: 9.0E-9 bit: 61.9 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 389 Subject End: 435 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgaagctgacgtggtttgaagagatttttgaaaagta Subject: NC_003028_SP_1596_SP_1597|IS3-Spn1, hypothetical protein, interruption:hypothetical protein|NEGATIVE:NEGATIVE|[1501007,1501233]|227 HSP 1 e-value: 6.0E-13 bit: 75.8 Len: 50 Query Start:123 Query End:172 Subject Strand: POSITIVE Subject Start: 113 Subject End: 162 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ..........................................................................................................................ttatactcaatgaaaatcaaagtgcaaactagaaagctagcctcaggctg....................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 195 Subject End: 227 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_0640_SP_0641|hypothetical protein:serine protease, subtilase family|POSITIVE:POSITIVE|[603164,603894]|731 HSP 1 e-value: 6.0E-13 bit: 75.8 Len: 46 Query Start:182 Query End:227 Subject Strand: NEGATIVE Subject Start: 313 Subject End: 358 .....................................................................................................................................................................................acggcaaggcaacgctgacgtggtttgaagagattttcgaagagta .....................................................................................................................................................................................acggcaaggcgacgttgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 39 Query Start:126 Query End:164 Subject Strand: NEGATIVE Subject Start: 468 Subject End: 506 .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagcc............................................................... .............................................................................................................................tactcaatgaaaatcaaagagcaaactaggaaactagcc............................................................... Subject: NC_003028_SP_0631_SP_0633|50S ribosomal protein L1:hypothetical protein|POSITIVE:POSITIVE|[598117,598657]|541 HSP 1 e-value: 6.0E-13 bit: 75.8 Len: 46 Query Start:182 Query End:227 Subject Strand: NEGATIVE Subject Start: 341 Subject End: 386 .....................................................................................................................................................................................acggcaaggcaacgctgacgtggtttgaagagattttcgaagagta .....................................................................................................................................................................................acggcaaggcgacgttgacgtggtttgaagagattttcgaagagta HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 47 Query Start:123 Query End:169 Subject Strand: NEGATIVE Subject Start: 491 Subject End: 537 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ..........................................................................................................................ttatactcaatgaaaaccaaagagcaaactaggaaactagccgcagg.......................................................... Subject: NC_008533_SPD_1744_SPD_1745|lipoprotein, putative:transcriptional regulator PlcR, putative|NEGATIVE:NEGATIVE|[1737854,1738235]|382 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 105 Subject End: 149 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagatcaaactaggtagctagccacagg.......................................................... HSP 2 e-value: 8.0E-6 bit: 52.0 Len: 30 Query Start:195 Query End:224 Subject Strand: POSITIVE Subject Start: 184 Subject End: 213 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaaga... ..................................................................................................................................................................................................gctgacgtgatttgaagagattttcgaaga... Subject: NC_008533_SPD_1626_SPD_1628|exodeoxyribonuclease III:xanthine phosphoribosyltransferase|POSITIVE:POSITIVE|[1641580, 1642850]|1271 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:123 Query End:167 Subject Strand: NEGATIVE Subject Start: 601 Subject End: 645 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccaca............................................................ ..........................................................................................................................ttatactaaatgaaaatcaaagagcaaactaggaagctatccaca............................................................ HSP 2 e-value: 9.0E-9 bit: 61.9 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 496 Subject End: 542 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggtaaggcgacgttgacgtggcttgaagagattttcgaagagta Subject: NC_008533_SPD_1568_SPD_1569|GTP cyclohydrolase, putative:aquaporin|POSITIVE:NEGATIVE|[1586901, 1587379]|479 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 5 Subject End: 49 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagttagccgcagg.......................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 378 Subject End: 424 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagta Subject: NC_008533_SPD_1425_SPD_1426|transporter, major facilitator family protein:hypothetical protein|NEGATIVE:NEGATIVE|[1444487,1444725]|239 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 127 Subject End: 171 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactagaaagctagccgcagg.......................................................... HSP 2 e-value: 1.0E-7 bit: 58.0 Len: 29 Query Start:199 Query End:227 Subject Strand: POSITIVE Subject Start: 211 Subject End: 239 ......................................................................................................................................................................................................acgtggtttgaagagattttcgaagagta ......................................................................................................................................................................................................acgtggtttgaagagattttcgaagagta Subject: NC_008533_SPD_0729_SPD_0730|hemolysin-related protein:purine nucleoside phosphorylase|POSITIVE:POSITIVE|[743379,744035]|657 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 99 Subject End: 143 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcagg.......................................................... HSP 2 e-value: 1.0E-10 bit: 67.9 Len: 42 Query Start:186 Query End:227 Subject Strand: POSITIVE Subject Start: 206 Subject End: 247 .........................................................................................................................................................................................caaggcaacgctgacgtggtttgaagagattttcgaagagta .........................................................................................................................................................................................caaggcgacgttgacgtggtttgaagagattttcgaagagta Subject: NC_008533_SPD_0259_SPD_0260|Transglycosylase associated protein:ribosomal small subunit pseudouridine synthase A|POSITIVE:POSITIVE|[257779,258090]|312 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 14 Subject End: 58 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcagg.......................................................... HSP 2 e-value: 9.0E-9 bit: 61.9 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 206 Subject End: 252 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgacgttgacgcggtttgaagagatttttgaagagta Subject: NC_008533_SPD_0173_SPD_0174|MccC family protein:membrnae protein, putative|NEGATIVE:NEGATIVE|[177190,177443]|254 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 41 Query Start:123 Query End:163 Subject Strand: NEGATIVE Subject Start: 160 Subject End: 200 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagc................................................................ ..........................................................................................................................ttatattcaatgaaaatcaaagagcaaactaggaagctagc................................................................ HSP 2 e-value: 2.0E-9 bit: 63.9 Len: 32 Query Start:196 Query End:227 Subject Strand: NEGATIVE Subject Start: 87 Subject End: 118 ...................................................................................................................................................................................................ctgacgtggtttgaagagattttcgaagagta ...................................................................................................................................................................................................ctgacgtggtttgaagagattttcgaagagta Subject: NC_003098_spr1762_spr1763|hypothetical protein:Transcriptional activator|NEGATIVE:NEGATIVE|[1730322,1730703]|382 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 105 Subject End: 149 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagatcaaactaggtagctagccacagg.......................................................... HSP 2 e-value: 8.0E-6 bit: 52.0 Len: 30 Query Start:195 Query End:224 Subject Strand: POSITIVE Subject Start: 184 Subject End: 213 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaaga... ..................................................................................................................................................................................................gctgacgtgatttgaagagattttcgaaga... Subject: NC_003098_spr1661_spr1662|hypothetical protein:xanthine phosphoribosyltransferase|POSITIVE:POSITIVE|[1634443, 1635319]|877 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:123 Query End:167 Subject Strand: NEGATIVE Subject Start: 207 Subject End: 251 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccaca............................................................ ..........................................................................................................................ttatactaaatgaaaatcaaagagcaaactaggaagctatccaca............................................................ HSP 2 e-value: 9.0E-9 bit: 61.9 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 102 Subject End: 148 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggtaaggcgacgttgacgtggcttgaagagattttcgaagagta Subject: NC_003098_spr1603_spr1604|hypothetical protein:Aquaporin Z - water channel protein|POSITIVE:NEGATIVE|[1579370,1579848]|479 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 5 Subject End: 49 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagttagccgcagg.......................................................... HSP 2 e-value: 4.0E-11 bit: 69.9 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 378 Subject End: 424 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggtgaagctgacgtggtttgaagagattttcgaagagta Subject: NC_003098_spr1453_spr1454|Major facilitator superfamily transporter - efflux?:hypothetical protein|NEGATIVE:NEGATIVE|[1436956,1437194]|239 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 127 Subject End: 171 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactagaaagctagccgcagg.......................................................... HSP 2 e-value: 1.0E-7 bit: 58.0 Len: 29 Query Start:199 Query End:227 Subject Strand: POSITIVE Subject Start: 211 Subject End: 239 ......................................................................................................................................................................................................acgtggtttgaagagattttcgaagagta ......................................................................................................................................................................................................acgtggtttgaagagattttcgaagagta Subject: NC_003098_spr0737_spr0738|Conserved hypothetical protein, truncation:Purine nucleoside phosphorylase (inosine phosphorylase)|POSITIVE:POSITIVE|[735848,736504]|657 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 99 Subject End: 143 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcagg.......................................................... HSP 2 e-value: 1.0E-10 bit: 67.9 Len: 42 Query Start:186 Query End:227 Subject Strand: POSITIVE Subject Start: 206 Subject End: 247 .........................................................................................................................................................................................caaggcaacgctgacgtggtttgaagagattttcgaagagta .........................................................................................................................................................................................caaggcgacgttgacgtggtttgaagagattttcgaagagta Subject: NC_003098_spr0255_spr0256|hypothetical protein:Ribosomal small subunit pseudouridine synthase A|POSITIVE:POSITIVE|[257778,258089]|312 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 14 Subject End: 58 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcagg.......................................................... HSP 2 e-value: 9.0E-9 bit: 61.9 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 206 Subject End: 252 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgacgttgacgcggtttgaagagatttttgaagagta Subject: NC_003098_spr0168_spr0169|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[177190,177443]|254 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 41 Query Start:123 Query End:163 Subject Strand: NEGATIVE Subject Start: 160 Subject End: 200 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagc................................................................ ..........................................................................................................................ttatattcaatgaaaatcaaagagcaaactaggaagctagc................................................................ HSP 2 e-value: 2.0E-9 bit: 63.9 Len: 32 Query Start:196 Query End:227 Subject Strand: NEGATIVE Subject Start: 87 Subject End: 118 ...................................................................................................................................................................................................ctgacgtggtttgaagagattttcgaagagta ...................................................................................................................................................................................................ctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_1945_SP_1946|hypothetical protein:transcriptional regulator PlcR, putative|NEGATIVE:NEGATIVE|[1848657,1849038]|382 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 105 Subject End: 149 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagatcaaactaggtagctagccacagg.......................................................... HSP 2 e-value: 8.0E-6 bit: 52.0 Len: 30 Query Start:195 Query End:224 Subject Strand: POSITIVE Subject Start: 184 Subject End: 213 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaaga... ..................................................................................................................................................................................................gctgacgtgatttgaagagattttcgaaga... Subject: NC_003028_SP_1872_SP_1873|iron-compound ABC transporter, iron-compound-binding protein:hypothetical protein|POSITIVE:NEGATIVE|[1778228,1778451]|224 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 21 Subject End: 65 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcagg.......................................................... HSP 2 e-value: 1.0E-7 bit: 58.0 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 101 Subject End: 133 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgcggtttgaagagattttcgaagagta Subject: NC_003028_SP_1845_SP_1847|exodeoxyribonuclease:xanthine phosphoribosyltransferase|POSITIVE:POSITIVE|[1754015, 1755276]|1262 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:123 Query End:167 Subject Strand: NEGATIVE Subject Start: 601 Subject End: 645 ..........................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccaca............................................................ ..........................................................................................................................ttatactaaatgaaaatcaaagagcaaactaggaagctatccaca............................................................ HSP 2 e-value: 9.0E-9 bit: 61.9 Len: 47 Query Start:181 Query End:227 Subject Strand: NEGATIVE Subject Start: 496 Subject End: 542 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggtaaggcgacgttgacgtggcttgaagagattttcgaagagta Subject: NC_003028_SP_1777_SP_1778|hypothetical protein:aquaporin|POSITIVE:NEGATIVE|[1695666, 1696188]|523 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 5 Subject End: 49 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagttagccgcagg.......................................................... HSP 2 e-value: 6.0E-10 bit: 65.9 Len: 33 Query Start:195 Query End:227 Subject Strand: POSITIVE Subject Start: 436 Subject End: 468 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta Subject: NC_003028_SP_0457_SP_0458|undecaprenyl pyrophosphate phosphatase:DNA polymerase IV|POSITIVE:NEGATIVE|[430753,430898]|146 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:128 Query End:172 Subject Strand: NEGATIVE Subject Start: 100 Subject End: 144 ...............................................................................................................................ctcaatgaaaatcaaagagcaaactaggaagctagccacaggctg....................................................... ...............................................................................................................................ctcaatgaaaatcaaagagcaaactaggaggctagccgcaggctg....................................................... HSP 2 e-value: 1.0E-7 bit: 58.0 Len: 33 Query Start:195 Query End:227 Subject Strand: NEGATIVE Subject Start: 36 Subject End: 68 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgcggtttgaagagattttcgaagagta Subject: NC_003028_SP_0279_SP_0280|hypothetical protein:ribosomal small subunit pseudouridine synthase A|POSITIVE:POSITIVE|[257322,257588]|267 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:125 Query End:169 Subject Strand: POSITIVE Subject Start: 14 Subject End: 58 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcagg.......................................................... HSP 2 e-value: 9.0E-9 bit: 61.9 Len: 47 Query Start:181 Query End:227 Subject Strand: POSITIVE Subject Start: 161 Subject End: 207 ....................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaagagattttcgaagagta ....................................................................................................................................................................................tacggcaaggcgacgttgacgcggtttgaagagatttttgaagagta Subject: NC_003028_SP_0145_SP_0146|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[143896,144439]|544 HSP 1 e-value: 2.0E-12 bit: 73.8 Len: 45 Query Start:125 Query End:169 Subject Strand: NEGATIVE Subject Start: 437 Subject End: 481 ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacagg.......................................................... ............................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcagg.......................................................... HSP 2 e-value: 1.0E-7 bit: 58.0 Len: 33 Query Start:195 Query End:227 Subject Strand: NEGATIVE Subject Start: 242 Subject End: 274 ..................................................................................................................................................................................................gctgacgtggtttgaagagattttcgaagagta ..................................................................................................................................................................................................gctgacgtggtttgaagagagtttcgaagagta Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ GAUACUCCAAUCUUUUUUCUUCCAUUUUAGCUGAAACAGUCGGAAUUUUCCAAUGAUUUGACCGGAAAUAUGGGCAUAGAAAAAACGCCAGCUCAUGUGAGAAUGACGUUUUUCAGAGGCUUAUACUCAAUGAAAAUCAAAGAGCAAACUAGGAAGCUAGCCACAGGCUGUACUUGAGUACGGCAAGGCAACGCUGACGUGGUUUGAAGAGAUUUUCGAAGAGUA ..(((((............((((.(((..((((...))))..))).....(((....)))...)))).(((((((.....(((((((.((.(((....)))..)).))))))).....))))))).....((((((((......((((((((..(((..(((....(((((((....)))))))..)))...)))..).)))))))....))))))))..))))) (-60.60) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UACUCUUCGAAAAUCUCUUCAAACCACGUCAGCGUUGCCUUGCCGUACUCAAGUACAGCCUGUGGCUAGCUUCCUAGUUUGCUCUUUGAUUUUCAUUGAGUAUAAGCCUCUGAAAAACGUCAUUCUCACAUGAGCUGGCGUUUUUUCUAUGCCCAUAUUUCCGGUCAAAUCAUUGGAAAAUUCCGACUGUUUCAGCUAAAAUGGAAGAAAAAAGAUUGGAGUAUC (((((...(((((((....(((((...(..(((...(((..((.((((....)))).))....)))..)))..)..)))))......)))))))...)))))...((....(((((((((((..(((....))).)))))))))))....))......((((((((......(((((....))))).(.(((((.......))))).).....)))))))).... (-59.10) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 958 189 141 218 170 smit:SMT_1810|5end_hypothetical_protein_1785219..1785449_POSITIVE 940 120 71 213 164 smit:SMT_1476|5end_thiol_peroxidase_1459219..1459449_NEGATIVE 927 189 141 184 136 smit:SMT_1602|5end_hypothetical_protein_1592385..1592615_POSITIVE 927 189 141 196 148 smit:SMT_1488|5end_K06147_ATP-binding_cassette,_subfamily_B,_bacterial_1467157..1467387_POSITIVE 927 189 141 209 161 smit:SMT_833|5end_hypothetical_protein_predicted_by_Glimmer/Critica_775362..775592_NEGATIVE 927 189 141 193 145 smit:SMT_130|5end_capsular_polysaccharide_biosynthesis_protein_80995..81225_POSITIVE 893 188 141 231 184 smit:SMT_1138|5end_hypothetical_protein_1079547..1079777_NEGATIVE 889 188 141 180 133 smit:SMT_1782|5end_hypothetical_protein_1759520..1759750_POSITIVE 888 200 151 194 145 smit:SMT_1963|5end_ribonuclease_BN,_putative_1896462..1896692_NEGATIVE 888 200 151 181 132 smit:SMT_483|5end_transcriptional_activator_TipA,_putative_418827..419057_POSITIVE 882 180 131 226 177 smit:SMT_1179|5end_aldose_1-epimerase_1137854..1138084_NEGATIVE 751 170 123 162 115 smit:SMT_366|5end_hypothetical_protein_302085..302315_POSITIVE 749 170 123 152 105 smit:SMT_1200|5end_K06148_ATP-binding_cassette,_subfamily_C,_bacterial_1163235..1163465_NEGATIVE 728 170 123 219 172 smit:SMT_1379|5end_thymidylate_kinase_1357438..1357668_NEGATIVE 693 168 121 231 184 smit:SMT_443|5end_hydroxyethylthiazole_kinase_382555..382785_POSITIVE 661 220 175 47 1 smit:SMT_2109|5end_hypothetical_protein_predicted_by_Glimmer/Critica_1999099..1999329_NEGATIVE 644 220 171 214 169 smit:SMT_677|5end_DNA_topoisomerase_I_587318..587548_NEGATIVE 634 170 123 194 148 smit:SMT_150|5end_K02030_polar_amino_acid_transport_system_substrate-binding_protein_98787..99017_POSITIVE 612 220 179 79 38 smit:SMT_958|5end_hypothetical_protein_predicted_by_Glimmer/Critica_905052..905282_POSITIVE 596 170 123 159 112 smit:SMT_163|5end_cardiolipin_synthetase_107309..107539_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1017 200 151 64 15 smit:SMT_1140|3end_glycogen_phosphorylase_1081316..1081466_NEGATIVE 987 189 141 53 5 smit:SMT_2109|3end_hypothetical_protein_predicted_by_Glimmer/Critica_1999061..1999211_NEGATIVE 987 189 141 53 5 smit:SMT_1180|3end_putative_tagatose-6-phosphate_aldose/ketose_isomerase_1138036..1138186_NEGATIVE 958 189 141 53 5 smit:SMT_1809|3end_MutT/NUDIX_family_protein_1785134..1785284_POSITIVE 927 189 141 54 6 smit:SMT_834|3end_hypothetical_protein_775517..775667_NEGATIVE 924 188 141 50 3 smit:SMT_799|3end_hypothetical_protein_707296..707446_NEGATIVE 915 200 151 60 11 smit:SMT_1536|3end_trigger_factor_1520636..1520786_NEGATIVE 896 189 141 53 5 smit:SMT_698|3end_uracil_permease_609769..609919_POSITIVE 888 200 151 60 11 smit:SMT_1964|3end_sodium/hydrogen_exchanger_family_protein_1896596..1896746_NEGATIVE 859 200 151 65 16 smit:SMT_915|3end_sucrose_operon_repressor_868619..868769_POSITIVE 847 188 141 52 5 smit:SMT_890|3end_K02029_polar_amino_acid_transport_system_permease_protein_837692..837842_POSITIVE 772 208 161 49 2 smit:SMT_1671|3end_hypothetical_protein_1659392..1659542_NEGATIVE 768 200 151 57 8 smit:SMT_1766|3end_sucrose-6-phosphate_hydrolase_1743101..1743251_POSITIVE 752 199 155 45 1 smit:SMT_1487|3end_hypothetical_protein_1467076..1467226_POSITIVE 681 220 177 59 17 smit:SMT_1815|3end_K02035_peptide/nickel_transport_system_substrate-binding_protein_1788899..1789049_NEGATIVE 667 220 180 41 1 smit:SMT_1872|3end_K03217_preprotein_translocase_YidC_subunit_1830883..1831033_NEGATIVE 660 220 173 49 1 smit:SMT_442|3end_transcriptional_regulator,_putative_382400..382550_POSITIVE 644 220 171 85 40 smit:SMT_678|3end_K04096_DNA_processing_protein_587447..587597_NEGATIVE 636 220 172 80 32 smit:SMT_1569|3end_dihydroxy-acid_dehydratase_1563068..1563218_POSITIVE 634 170 123 112 66 smit:SMT_149|3end_hypothetical_protein_predicted_by_Glimmer/Critica_98785..98935_POSITIVE