Origin IGS:
ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9
aaattactacctcattatgtttaaattattagaaatattataccatattaaacaaaattatgattttgatttttctttaatattatttatccaatcatttttactggaatctaacatagaataatactatcctatacaattgacagctcaaatctttcagaatagaacaatcctaactatcgaatactctaacttcataaatatctatgcaattctagatctagaattcctataaactaaatgttttcgcactcttctaaaacattgattgccttaaattttaatttttgaaggattctaaagctagaatagtcccatcacaatcagttttgaattattatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagtattaacaatttagaaacgctatgattccactccttttacattaaaaaggaactgcataaagcaatccctttctgattttgaaattatttacttaaaatttgatagttgagataatcaataactcacctataaaagaaatgataggatgattcc

Mask Tandem Repeat Region ================================================
ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt

Find is-nt database================================================
Query_seq: SMT_1393:SMT_1394|SMT_1393:SMT_1394:hypothetical protein:hypothetical protein predicted by Glimmer/Critica:->->:1369621..1370215 595
ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find is-aa database================================================
Query_seq: SMT_1393:SMT_1394|SMT_1393:SMT_1394:hypothetical protein:hypothetical protein predicted by Glimmer/Critica:->->:1369621..1370215 595
ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find nr database================================================
Query_seq: SMT_1393:SMT_1394|SMT_1393:SMT_1394:hypothetical protein:hypothetical protein predicted by Glimmer/Critica:->->:1369621..1370215 595
ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt
Predict ORF larger than 30AA ================================================
Protein_Len: 48	Strand: +	Start: 146	End: 289
................................................................................................................................................. M  L  I  L  F  E  N  Q  I  Q  T  T  S  T  S  P  C  R  T  Q  V  Q  P  A  A  S  F  L  V  C  S  L  I  F  I  E  Y  N  N  S  K  L  I  V  M  G  L  F ..................................................................................................................................................................................................................................................................................................................
Protein_Len: 36	Strand: -	Start: 475	End: 582
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... E  I  N  S  E  L  L  F  S  Q  I  F  L  I  L  S  F  D  F  D  Y  N  Q  K  I  H  Y  L  I  E  L  L  K  F  M  M .............
Protein_Len: 33	Strand: -	Start: 364	End: 462
........................................................................................................................................................................................................................................................................................................................................................................... L  F  E  L  D  L  I  A  Y  I  N  I  F  N  S  Y  E  I  T  L  I  T  R  N  Q  F  I  Q  A  T  L  Q  M .....................................................................................................................................

ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt
Predict Promoter with matrix: RpoD-15 score > 80================================================

Predict Promoter with matrix: RpoD-16 score > 80================================================

Predict Promoter with matrix: RpoD-17 score > 80================================================
PromScan Matrix: RpoD-17	Strand: +	Score: 82	Start: 230	End: 259
.....................................................................................................................................................................................................................................GTTTGCTCTTTGATTTTCATTGAGTATAAT................................................................................................................................................................................................................................................................................................................................................
PromScan Matrix: RpoD-17	Strand: -	Score: 82	Start: 428	End: 457
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACAGCTCAAATCTTTCAGAATAGAAC..........................................................................................................................................
PromScan Matrix: RpoD-17	Strand: +	Score: 81	Start: 272	End: 301
...............................................................................................................................................................................................................................................................................ATTGTGATGGGACTATTCTAGCTTTAGAAT......................................................................................................................................................................................................................................................................................................

Predict Promoter with matrix: RpoD-18 score > 80================================================

Predict Promoter with matrix: RpoD-19 score > 80================================================

Predict Promoter with matrix: RpoN score > 80================================================

ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt
Predict TransTerm conf > 70================================================
TransTerm Strand: +	Conf: 73	HP_score: -5.4	Tail_Score: -4.8048	Start: 86	End: 106	Full_Region: TTTCAAAATCAGAAA GGGATTGC TTTAT GCAGTTCC TTTTTAATGTAAAAG
.....................................................................................GGGATTGCTTTATGCAGTTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

Find igs database================================================
Query_seq: SMT_1393:SMT_1394|SMT_1393:SMT_1394:hypothetical protein:hypothetical protein predicted by Glimmer/Critica:->->:1369621..1370215 595
ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt
Intra-Species Hit: Count: 39	Min: 1	Max: 595	Len: 595
Subject: smit_SMT_1393_SMT_1394|hypothetical protein:hypothetical protein predicted by Glimmer/Critica|POSITIVE:POSITIVE|[1369621,1370215]|595
HSP  1	e-value: 0.0	bit: 1179.0	Len: 595	Query Start:1	Query End:595	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 595
ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt
ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt

Subject: smit_SMT_1138_SMT_1139|hypothetical protein:rRNA (guanine-N1-)- methyltransferase|NEGATIVE:POSITIVE|[1079638, 1079894]|257
HSP  1	e-value: 2.0E-55	bit: 218.0	Len: 110	Query Start:150	Query End:259	Subject Strand: NEGATIVE	Subject Start: 72	Subject End: 181
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataat................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataat................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_662_SMT_663|A/G-specific adenine glycosylase:phosphate acetyltransferase|NEGATIVE:NEGATIVE|[573918,574105]|188
HSP  1	e-value: 4.0E-53	bit: 210.0	Len: 106	Query Start:153	Query End:258	Subject Strand: POSITIVE	Subject Start: 50	Subject End: 155
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_259_SMT_260|dipeptide/tripeptide permease:phage transcriptional repressor|POSITIVE:POSITIVE|[199242,199609]|368
HSP  1	e-value: 4.0E-53	bit: 210.0	Len: 110	Query Start:149	Query End:258	Subject Strand: POSITIVE	Subject Start: 101	Subject End: 210
....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccgcgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_1601_SMT_1602|hypothetical protein predicted by Glimmer/Critica:hypothetical protein|POSITIVE:POSITIVE|[1592204,1592524]|321
HSP  1	e-value: 2.0E-52	bit: 208.0	Len: 105	Query Start:152	Query End:256	Subject Strand: POSITIVE	Subject Start: 191	Subject End: 295
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_129_SMT_130|putative glycosyltransferase:capsular polysaccharide biosynthesis protein|POSITIVE:POSITIVE|[80944,81134]|191
HSP  1	e-value: 1.0E-50	bit: 202.0	Len: 110	Query Start:150	Query End:259	Subject Strand: POSITIVE	Subject Start: 50	Subject End: 159
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataat................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatgctcttcgaaaatcaaattcaaaccgcgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataat................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_698_SMT_699|uracil permease:K03106 signal recognition particle, subunit SRP54|POSITIVE:NEGATIVE|[609830,610030]|201
HSP  1	e-value: 2.0E-49	bit: 198.0	Len: 104	Query Start:153	Query End:256	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 104
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgttctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_482_SMT_483|hypothetical protein predicted by Glimmer/Critica:transcriptional activator TipA, putative|NEGATIVE:POSITIVE|[418627,418966]|340
HSP  1	e-value: 1.0E-47	bit: 192.0	Len: 109	Query Start:150	Query End:258	Subject Strand: POSITIVE	Subject Start: 222	Subject End: 330
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_1963_SMT_1964|ribonuclease BN, putative:sodium/hydrogen exchanger family protein|NEGATIVE:NEGATIVE|[1896553,1896685]|133
HSP  1	e-value: 4.0E-47	bit: 190.0	Len: 110	Query Start:149	Query End:258	Subject Strand: NEGATIVE	Subject Start: 24	Subject End: 133
....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcatkgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_1534_SMT_1535|signal peptidase I:exodeoxyribonuclease V alpha chain|POSITIVE:POSITIVE|[1517973,1518206]|234
HSP  1	e-value: 2.0E-46	bit: 188.0	Len: 111	Query Start:148	Query End:258	Subject Strand: NEGATIVE	Subject Start: 97	Subject End: 207
...................................................................................................................................................gttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
...................................................................................................................................................gttaatactcttcgaaaatcaaattcaaaccacgtcagtttcgccttgccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_1809_SMT_1810|MutT/NUDIX family protein:hypothetical protein|POSITIVE:POSITIVE|[1785195,1785358]|164
HSP  1	e-value: 6.0E-46	bit: 186.0	Len: 106	Query Start:153	Query End:258	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 106
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcagcttcgccttgccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_1139_SMT_1140|rRNA (guanine-N1-)-methyltransferase:glycogen phosphorylase|POSITIVE:NEGATIVE|[1080744,1081405]|662
HSP  1	e-value: 6.0E-46	bit: 186.0	Len: 106	Query Start:153	Query End:258	Subject Strand: NEGATIVE	Subject Start: 557	Subject End: 662
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcagcgttgccttgccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_1068_SMT_1069|ATP-dependent DNA helicase RecG:acetyl xylan esterase, putative|POSITIVE:POSITIVE|[1009047,1009469]|423
HSP  1	e-value: 6.0E-46	bit: 186.0	Len: 110	Query Start:149	Query End:258	Subject Strand: NEGATIVE	Subject Start: 19	Subject End: 128
....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_1487_SMT_1488|hypothetical protein:K06147 ATP-binding cassette, subfamily B, bacterial|POSITIVE:POSITIVE|[1467137,1467296]|160
HSP  1	e-value: 9.0E-45	bit: 182.0	Len: 104	Query Start:153	Query End:256	Subject Strand: POSITIVE	Subject Start: 19	Subject End: 122
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactcttcgaaaatcaaattcaaactgcgtcaacgtcgccttgccgtactcgagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_2133_SMT_2134|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[2014098,2014211]|114
HSP  1	e-value: 4.0E-44	bit: 180.0	Len: 103	Query Start:150	Query End:252	Subject Strand: POSITIVE	Subject Start: 12	Subject End: 114
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattga.......................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattga.......................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_872_SMT_873|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[820709,820822]|114
HSP  1	e-value: 4.0E-44	bit: 180.0	Len: 103	Query Start:150	Query End:252	Subject Strand: POSITIVE	Subject Start: 12	Subject End: 114
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattga.......................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattga.......................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_384_SMT_385|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[319921,320034]|114
HSP  1	e-value: 4.0E-44	bit: 180.0	Len: 103	Query Start:150	Query End:252	Subject Strand: NEGATIVE	Subject Start: 1	Subject End: 103
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattga.......................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattga.......................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_833_SMT_834|hypothetical protein predicted by Glimmer/Critica:hypothetical protein|NEGATIVE:NEGATIVE|[775453,775606]|154
HSP  1	e-value: 1.0E-43	bit: 178.0	Len: 106	Query Start:153	Query End:258	Subject Strand: NEGATIVE	Subject Start: 50	Subject End: 154
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_1670_SMT_1671|K02030 polar amino acid transport system substrate-binding protein:hypothetical protein|POSITIVE:NEGATIVE|[1659356,1659481]|126
HSP  1	e-value: 2.0E-42	bit: 174.0	Len: 104	Query Start:152	Query End:255	Subject Strand: NEGATIVE	Subject Start: 1	Subject End: 104
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagta....................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagtttgctctttgattttcattgagta....................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_826_SMT_827|hypothetical protein:hypothetical protein|NEGATIVE:POSITIVE|[750113,750528]|416
HSP  1	e-value: 2.0E-42	bit: 174.0	Len: 108	Query Start:151	Query End:258	Subject Strand: POSITIVE	Subject Start: 104	Subject End: 211
......................................................................................................................................................aatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
......................................................................................................................................................aatactcttcgaaaatcaaattcaaaccacgtcagcttcgccttgccgtactccagtacaacctgcggctagcttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_2108_SMT_2109|adenylosuccinate lyase:hypothetical protein predicted by Glimmer/Critica|NEGATIVE:NEGATIVE|[1998942,1999150]|209
HSP  1	e-value: 4.0E-41	bit: 170.0	Len: 106	Query Start:153	Query End:258	Subject Strand: NEGATIVE	Subject Start: 104	Subject End: 209
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcagcttcgccttgccgtactcaagtacagcctgtggctagctttctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_1766_SMT_1767|sucrose-6-phosphate hydrolase:oxidoreductase, short chain dehydrogenase/reductase family|POSITIVE:NEGATIVE|[1743162,1743332]|171
HSP  1	e-value: 4.0E-41	bit: 170.0	Len: 110	Query Start:149	Query End:258	Subject Strand: POSITIVE	Subject Start: 4	Subject End: 113
....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcagcgtcgcctcaccgtactcaagtacagcttgcgactagcttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_1179_SMT_1180|aldose 1-epimerase:putative tagatose-6-phosphate aldose/ketose isomerase|NEGATIVE:NEGATIVE|[1137945,1138125]|181
HSP  1	e-value: 4.0E-41	bit: 170.0	Len: 106	Query Start:153	Query End:258	Subject Strand: NEGATIVE	Subject Start: 76	Subject End: 181
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcagcttcgccttgccgtactcaagtacagcctgtggctagctttctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_890_SMT_891|K02029 polar amino acid transport system permease protein:oxidoreductase, putative|POSITIVE:POSITIVE|[837753,837989]|237
HSP  1	e-value: 4.0E-41	bit: 170.0	Len: 106	Query Start:153	Query End:258	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 106
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcagcttcaccttgccgtactcaagtacagcctgcgtctagcttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_1781_SMT_1782|transcriptional regulator, xre family:hypothetical protein|POSITIVE:POSITIVE|[1759357,1759659]|303
HSP  1	e-value: 3.0E-38	bit: 161.0	Len: 105	Query Start:152	Query End:256	Subject Strand: POSITIVE	Subject Start: 176	Subject End: 280
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatcaaattcaaactacgtcagcttcaccttgccgtactcaagtacagccttcggctagcttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_442_SMT_443|transcriptional regulator, putative:hydroxyethylthiazole kinase|POSITIVE:POSITIVE|[382461,382694]|234
HSP  1	e-value: 3.0E-38	bit: 161.0	Len: 109	Query Start:150	Query End:258	Subject Strand: POSITIVE	Subject Start: 34	Subject End: 142
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taattctcttcgaaaatcaaattcaaaccacgtcagcttcaccttgccgtactcaagtacagcctacggctagcttcctagtttgctctttgattttcattgagcataa.................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_798_SMT_799|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[707167,707385]|219
HSP  1	e-value: 8.0E-36	bit: 153.0	Len: 109	Query Start:150	Query End:258	Subject Strand: NEGATIVE	Subject Start: 112	Subject End: 219
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatctc-ttcaaaccacgtcagcttcaccttgccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_1476_SMT_1477|thiol peroxidase:K02077 zinc/manganese transport system substrate-binding protein|NEGATIVE:NEGATIVE|[1459310,1459536]|227
HSP  1	e-value: 5.0E-34	bit: 147.0	Len: 106	Query Start:153	Query End:258	Subject Strand: NEGATIVE	Subject Start: 123	Subject End: 227
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactcttcgaaaatctc-ttcaaaccacgtcagcgttgccttgccgtactcaagtacagcctgtggctagcttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_915_SMT_916|sucrose operon repressor:3-hydroxy-3-methylglutaryl-CoA reductase|POSITIVE:NEGATIVE|[868680,868819]|140
HSP  1	e-value: 1.0E-31	bit: 139.0	Len: 106	Query Start:153	Query End:258	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 105
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_1535_SMT_1536|exodeoxyribonuclease V alpha chain:trigger factor|POSITIVE:NEGATIVE|[1520574,1520725]|152
HSP  1	e-value: 5.0E-31	bit: 137.0	Len: 105	Query Start:152	Query End:256	Subject Strand: NEGATIVE	Subject Start: 45	Subject End: 148
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgtggctagcttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_1849_SMT_1850|hypothetical protein:K01421 putative membrane protein|POSITIVE:POSITIVE|[1813865,1815201]|1337
HSP  1	e-value: 3.0E-26	bit: 121.0	Len: 105	Query Start:152	Query End:256	Subject Strand: NEGATIVE	Subject Start: 257	Subject End: 360
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcagcttcgccttgccgtactcaagtactgactacggctagcttcctagtttgatctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_1689_SMT_1690|PTS enzyme, maltose-and glucose-specific, factor II homologue:K06148 ATP-binding cassette, subfamily C, bacterial|POSITIVE:NEGATIVE|[1673200,1673459]|260
HSP  1	e-value: 7.0E-21	bit: 103.0	Len: 104	Query Start:152	Query End:255	Subject Strand: NEGATIVE	Subject Start: 1	Subject End: 103
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagta....................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccatgccagcttcgccttggcgtactcaagtatagcctgcgcctagcttcccagtttgctctttgattttcattgagta....................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_1200_SMT_1201|K06148 ATP-binding cassette, subfamily C, bacterial:hypothetical protein predicted by Glimmer/Critica|NEGATIVE:NEGATIVE|[1163326,1163854]|529
HSP  1	e-value: 4.0E-19	bit: 97.6	Len: 49	Query Start:152	Query End:200	Subject Strand: NEGATIVE	Subject Start: 116	Subject End: 164
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 4.0E-16	bit: 87.7	Len: 48	Query Start:209	Query End:256	Subject Strand: NEGATIVE	Subject Start: 14	Subject End: 61
................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
................................................................................................................................................................................................................cagcctgcggctagttttctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_1544_SMT_1545|mevalonate kinase:choline-binding protein|NEGATIVE:NEGATIVE|[1528975,1529249]|275
HSP  1	e-value: 2.0E-15	bit: 85.7	Len: 51	Query Start:150	Query End:200	Subject Strand: NEGATIVE	Subject Start: 136	Subject End: 186
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 4.0E-7	bit: 58.0	Len: 45	Query Start:212	Query End:256	Subject Strand: NEGATIVE	Subject Start: 33	Subject End: 77
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
...................................................................................................................................................................................................................cctgcgggtagcttcatagtttgctttttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_495_SMT_496|bacterial peptide chain release factor 2 (RF-2):superoxide dismutase, manganese-dependent|POSITIVE:POSITIVE|[430114, 430572]|459
HSP  1	e-value: 2.0E-15	bit: 85.7	Len: 43	Query Start:216	Query End:258	Subject Strand: NEGATIVE	Subject Start: 157	Subject End: 199
.......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 2.0E-8	bit: 61.9	Len: 51	Query Start:150	Query End:200	Subject Strand: NEGATIVE	Subject Start: 307	Subject End: 356
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatctc-ttcaaaccgcgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_1569_SMT_1570|dihydroxy-acid dehydratase:hypothetical protein|POSITIVE:NEGATIVE|[1563129,1563339]|211
HSP  1	e-value: 3.0E-14	bit: 81.8	Len: 45	Query Start:212	Query End:256	Subject Strand: POSITIVE	Subject Start: 110	Subject End: 154
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgttctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 2.0E-9	bit: 65.9	Len: 49	Query Start:152	Query End:200	Subject Strand: POSITIVE	Subject Start: 5	Subject End: 52
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_1554_SMT_1555|isoleucyl-tRNA synthetase:hypothetical protein|POSITIVE:NEGATIVE|[1539973,1540312]|340
HSP  1	e-value: 2.0E-12	bit: 75.8	Len: 110	Query Start:149	Query End:258	Subject Strand: POSITIVE	Subject Start: 146	Subject End: 254
....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
....................................................................................................................................................ttaatacttttcgaaaatctc-ttcaaactacgtcaatgtcgcctcactgtacttcagcacagcttgcgactagcttcctagtttgctttttgattttcatttagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_912_SMT_913|fructokinase:putative sucrose-specific PTS permease, enzyme II|NEGATIVE:NEGATIVE|[863711,864012]|302
HSP  1	e-value: 6.0E-12	bit: 73.8	Len: 45	Query Start:216	Query End:260	Subject Strand: NEGATIVE	Subject Start: 147	Subject End: 191
.......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgattttcattgagtataata...............................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................................................................................cggctagcttcctagtttgctctttgattttcattgagtacaata...............................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 2.0E-11	bit: 71.9	Len: 48	Query Start:153	Query End:200	Subject Strand: NEGATIVE	Subject Start: 255	Subject End: 302
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccatgtcagcttcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: smit_SMT_217_SMT_218|hypothetical protein:undecaprenyl pyrophosphate synthetase|POSITIVE:POSITIVE|[149949,150294]|346
HSP  1	e-value: 6.0E-12	bit: 73.8	Len: 45	Query Start:212	Query End:256	Subject Strand: NEGATIVE	Subject Start: 158	Subject End: 202
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
...................................................................................................................................................................................................................cctgcggctagcttcctagtttggtctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 2.0E-9	bit: 65.9	Len: 33	Query Start:152	Query End:184	Subject Strand: NEGATIVE	Subject Start: 239	Subject End: 271
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtca...........................................................................................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtca...........................................................................................................................................................................................................................................................................................................................................................................................................................


Inter-species Hit: Count: 65	Min: 20	Max: 464	Len: 445
Subject: NC_008533_SPD_1034_SPD_1035|hydrolase, haloacid dehalogenase-like family protein:hypothetical protein|NEGATIVE:NEGATIVE|[1060510,1060966]|457
HSP  1	e-value: 7.0E-58	bit: 226.0	Len: 202	Query Start:263	Query End:464	Subject Strand: NEGATIVE	Subject Start: 100	Subject End: 301
......................................................................................................................................................................................................................................................................tcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtatag...................................................................................................................................
......................................................................................................................................................................................................................................................................tcaaaactgattgtgatggggctattctagctttagaaaccttcaaaaattaaaatttaaggcaatcaattacttggaagagtatgaaagcatttagtttataggaattctaggtctagaattacacatatatttatgaatacggggtgctcgatagttagtattgttctattctgaaagatttgagctgtcagttgtatag...................................................................................................................................
HSP  2	e-value: 9.0E-39	bit: 163.0	Len: 130	Query Start:20	Query End:149	Subject Strand: NEGATIVE	Subject Start: 309	Subject End: 438
...................ttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgt..............................................................................................................................................................................................................................................................................................................................................................................................................................................................
...................ttttataggtaagctattgattatctcaactataaaatgttaagtaaatgatttcaaaatcagaaagggattgctttatgcagttcctttttattttaacaggagtgaaactatagtgtttctaaattgt..............................................................................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003098_spr1057_spr1058|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1052979,1053435]|457
HSP  1	e-value: 7.0E-58	bit: 226.0	Len: 202	Query Start:263	Query End:464	Subject Strand: NEGATIVE	Subject Start: 100	Subject End: 301
......................................................................................................................................................................................................................................................................tcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtatag...................................................................................................................................
......................................................................................................................................................................................................................................................................tcaaaactgattgtgatggggctattctagctttagaaaccttcaaaaattaaaatttaaggcaatcaattacttggaagagtatgaaagcatttagtttataggaattctaggtctagaattacacatatatttatgaatacggggtgctcgatagttagtattgttctattctgaaagatttgagctgtcagttgtatag...................................................................................................................................
HSP  2	e-value: 9.0E-39	bit: 163.0	Len: 130	Query Start:20	Query End:149	Subject Strand: NEGATIVE	Subject Start: 309	Subject End: 438
...................ttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgt..............................................................................................................................................................................................................................................................................................................................................................................................................................................................
...................ttttataggtaagctattgattatctcaactataaaatgttaagtaaatgatttcaaaatcagaaagggattgctttatgcagttcctttttattttaacaggagtgaaactatagtgtttctaaattgt..............................................................................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_0280_SP_0281|ribosomal small subunit pseudouridine synthase A:aminopeptidase C|POSITIVE:POSITIVE|[258312,258528]|217
HSP  1	e-value: 2.0E-52	bit: 208.0	Len: 105	Query Start:152	Query End:256	Subject Strand: NEGATIVE	Subject Start: 10	Subject End: 114
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................

Subject: NC_008533_SPD_1551_SPD_1552|prevent-host-death family protein:hypothetical protein|NEGATIVE:NEGATIVE|[1574500,1574730]|231
HSP  1	e-value: 4.0E-50	bit: 200.0	Len: 109	Query Start:150	Query End:258	Subject Strand: NEGATIVE	Subject Start: 85	Subject End: 193
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaatcgcgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: NC_008533_SPD_0546_SPD_0547|branched-chain amino acid transport system II carrier protein:hypothetical protein|POSITIVE:POSITIVE|[559539,559741]|203
HSP  1	e-value: 4.0E-50	bit: 200.0	Len: 109	Query Start:150	Query End:258	Subject Strand: POSITIVE	Subject Start: 5	Subject End: 113
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccgcgtcaacgtcgccttgtcgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003098_spr1586_spr1587|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1567002,1567199]|198
HSP  1	e-value: 4.0E-50	bit: 200.0	Len: 109	Query Start:150	Query End:258	Subject Strand: NEGATIVE	Subject Start: 52	Subject End: 160
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaatcgcgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003098_spr0551_spr0552|Branched-chain amino acid transport system carrier protein:hypothetical protein|POSITIVE:POSITIVE|[552009,552211]|203
HSP  1	e-value: 4.0E-50	bit: 200.0	Len: 109	Query Start:150	Query End:258	Subject Strand: POSITIVE	Subject Start: 5	Subject End: 113
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccgcgtcaacgtcgccttgtcgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_1741_SP_1742|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1645558,1645794]|237
HSP  1	e-value: 4.0E-50	bit: 200.0	Len: 109	Query Start:150	Query End:258	Subject Strand: NEGATIVE	Subject Start: 91	Subject End: 199
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaatcgcgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_1180_SP_1181|ribonucleotide-diphosphate reductase beta subunit:hypothetical protein|POSITIVE:NEGATIVE|[1119540,1119753]|214
HSP  1	e-value: 2.0E-46	bit: 188.0	Len: 107	Query Start:153	Query End:259	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 107
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataat................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcagcttcgccttgccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtataat................................................................................................................................................................................................................................................................................................................................................

Subject: NC_008533_SPD_0260_SPD_0261|ribosomal small subunit pseudouridine synthase A:aminopeptidase C|POSITIVE:POSITIVE|[258814,259029]|216
HSP  1	e-value: 6.0E-43	bit: 176.0	Len: 105	Query Start:152	Query End:256	Subject Strand: NEGATIVE	Subject Start: 10	Subject End: 113
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_2183_SP_2184|hypothetical protein:glycerol uptake facilitator protein|NEGATIVE:NEGATIVE|[2101749,2102044]|296
HSP  1	e-value: 6.0E-43	bit: 176.0	Len: 105	Query Start:152	Query End:256	Subject Strand: NEGATIVE	Subject Start: 189	Subject End: 293
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_1472_SP_1473|oxidoreductase, putative:hypothetical protein|POSITIVE:NEGATIVE|[1386055,1386276]|222
HSP  1	e-value: 2.0E-42	bit: 174.0	Len: 108	Query Start:150	Query End:257	Subject Strand: NEGATIVE	Subject Start: 115	Subject End: 222
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtata..................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcagcttcaccttgccgtacttaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtata..................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_0816_SP_0817|hypothetical protein:MutT/nudix family protein|NEGATIVE:NEGATIVE|[768501,768664]|164
HSP  1	e-value: 4.0E-41	bit: 170.0	Len: 106	Query Start:153	Query End:258	Subject Strand: NEGATIVE	Subject Start: 59	Subject End: 164
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactcttcgaaaataaaattcaaaccacgtcagcgtcgccttaccgtactcaagtatagcctgcggctagcttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_0096_SP_0097|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[98992,99168]|177
HSP  1	e-value: 6.0E-40	bit: 167.0	Len: 104	Query Start:152	Query End:255	Subject Strand: NEGATIVE	Subject Start: 69	Subject End: 172
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagta....................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcaaaaatcaaattcaaaccacgtcagcttcgccttaccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagta....................................................................................................................................................................................................................................................................................................................................................

Subject: NC_008533_SPD_0714_SPD_0715|hypothetical protein:MutT/nudix family protein|NEGATIVE:NEGATIVE|[729726,729889]|164
HSP  1	e-value: 2.0E-36	bit: 155.0	Len: 106	Query Start:153	Query End:258	Subject Strand: NEGATIVE	Subject Start: 59	Subject End: 164
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactcttcgaaaataaaattcaaatcacgtaagcgtcgccttaccgtactcaagtatagcctgcggctagcttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003098_spr0720_spr0721|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[722195,722358]|164
HSP  1	e-value: 2.0E-36	bit: 155.0	Len: 106	Query Start:153	Query End:258	Subject Strand: NEGATIVE	Subject Start: 59	Subject End: 164
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactcttcgaaaataaaattcaaatcacgtaagcgtcgccttaccgtactcaagtatagcctgcggctagcttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: NC_008533_SPD_0991_SPD_0992|ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[1002301,1002645]|345
HSP  1	e-value: 8.0E-36	bit: 153.0	Len: 105	Query Start:152	Query End:256	Subject Strand: POSITIVE	Subject Start: 145	Subject End: 249
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaatttcaccttgccgtactcaagtacagcctgcggctaacttcctagtttgcactttaattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003098_spr1014_spr1015|50S ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[994770,995114]|345
HSP  1	e-value: 8.0E-36	bit: 153.0	Len: 105	Query Start:152	Query End:256	Subject Strand: POSITIVE	Subject Start: 145	Subject End: 249
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaatttcaccttgccgtactcaagtacagcctgcggctaacttcctagtttgcactttaattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_1107_SP_1108|50S ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[1038201,1038545]|345
HSP  1	e-value: 2.0E-33	bit: 145.0	Len: 105	Query Start:152	Query End:256	Subject Strand: POSITIVE	Subject Start: 145	Subject End: 249
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccatgtcaatttcaccttgccgtactcaagtacagcctgcggctaacttcctagtttgcactttaattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_1171_SP_1172|hydrolase, haloacid dehalogenase-like family:hypothetical protein|NEGATIVE:NEGATIVE|[1107003,1107252]|250
HSP  1	e-value: 8.0E-33	bit: 143.0	Len: 149	Query Start:316	Query End:464	Subject Strand: NEGATIVE	Subject Start: 100	Subject End: 250
...........................................................................................................................................................................................................................................................................................................................aatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatat--ttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtatag...................................................................................................................................
...........................................................................................................................................................................................................................................................................................................................aatttaaggcaatcaattacttggaagagtatgaaagcatttagtttataggaattctaggtctagaattacatatatatatttatgaagacggggtgttcgatagttagtattgttctattctgaaagatttgagctgtcagttgtatag...................................................................................................................................

Subject: NC_003028_SP_0292_SP_0293|bifunctional folate synthesis protein:hypothetical protein|POSITIVE:NEGATIVE|[271230,271378]|149
HSP  1	e-value: 8.0E-33	bit: 143.0	Len: 104	Query Start:152	Query End:255	Subject Strand: POSITIVE	Subject Start: 47	Subject End: 149
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagta....................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagtttgctctttgattttcattgagta....................................................................................................................................................................................................................................................................................................................................................

Subject: NC_008533_SPD_1158_SPD_1159|NADP-specific glutamate dehydrogenase:hypothetical protein|POSITIVE:NEGATIVE|[1188350,1188844]|495
HSP  1	e-value: 3.0E-29	bit: 131.0	Len: 110	Query Start:149	Query End:258	Subject Strand: NEGATIVE	Subject Start: 208	Subject End: 316
....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
....................................................................................................................................................ttaatactctttgaaaatctc-ttcaaaccacgtcagctttgccttgccgtactcaagtacagcctgcgactcgcttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003098_spr1181_spr1182|glutamate dehydrogenase:hypothetical protein|POSITIVE:NEGATIVE|[1180819,1181313]|495
HSP  1	e-value: 3.0E-29	bit: 131.0	Len: 110	Query Start:149	Query End:258	Subject Strand: NEGATIVE	Subject Start: 208	Subject End: 316
....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
....................................................................................................................................................ttaatactctttgaaaatctc-ttcaaaccacgtcagctttgccttgccgtactcaagtacagcctgcgactcgcttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_1306_SP_1307|glutamate dehydrogenase:hypothetical protein|POSITIVE:NEGATIVE|[1233949,1234453]|505
HSP  1	e-value: 7.0E-27	bit: 123.0	Len: 110	Query Start:149	Query End:258	Subject Strand: NEGATIVE	Subject Start: 218	Subject End: 326
....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
....................................................................................................................................................ttaatactctttgaaaatctc-ttcaaaccacgtcagctttgctttaccgtactcaagtacagcctgcggctcgcttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: NC_008533_SPD_0710_SPD_0711|septation ring formation regulator EzrA:hypothetical protein|POSITIVE:POSITIVE|[727105,727897]|793
HSP  1	e-value: 7.0E-24	bit: 113.0	Len: 105	Query Start:152	Query End:256	Subject Strand: POSITIVE	Subject Start: 135	Subject End: 238
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatctc-ttcaaatcacgtcagcgtcgccttaccgtactcaagtacagcctgaggctagcttcttagtttgctttttgattttcatttagtat...................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_0807_SP_0809|septation ring formation regulator EzrA:hypothetical protein|POSITIVE:POSITIVE|[764244,764778]|535
HSP  1	e-value: 7.0E-24	bit: 113.0	Len: 105	Query Start:152	Query End:256	Subject Strand: POSITIVE	Subject Start: 135	Subject End: 238
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatctt-ttcaaatcacgtcagcgtcgccttaccgtactcaagtacagcctgaggctagcttcttagtttgctttttgattttcatttagtat...................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_0041_SP_0042|bacteriocin BlpU:competence factor transporting ATP-binding/permease protein ComA|POSITIVE:POSITIVE|[40102,40815]|714
HSP  1	e-value: 2.0E-21	bit: 105.0	Len: 53	Query Start:148	Query End:200	Subject Strand: POSITIVE	Subject Start: 541	Subject End: 593
...................................................................................................................................................gttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
...................................................................................................................................................gttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 4.0E-16	bit: 87.7	Len: 48	Query Start:209	Query End:256	Subject Strand: POSITIVE	Subject Start: 648	Subject End: 695
................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
................................................................................................................................................................................................................cagcctacggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................

Subject: NC_008533_SPD_0089_SPD_0090|ABC transporter, permease protein:ABC transporter, substrate-binding protein|POSITIVE:POSITIVE|[89674,89930]|257
HSP  1	e-value: 4.0E-19	bit: 97.6	Len: 53	Query Start:148	Query End:200	Subject Strand: POSITIVE	Subject Start: 50	Subject End: 102
...................................................................................................................................................gttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
...................................................................................................................................................gttaatactcttcgaaaatcaaattcaaaccgcgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 3.0E-17	bit: 91.7	Len: 50	Query Start:209	Query End:258	Subject Strand: POSITIVE	Subject Start: 159	Subject End: 208
................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
................................................................................................................................................................................................................cagcctgcggctagttttctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: NC_008533_SPD_0047_SPD_0049|hypothetical protein:competence factor transporting ATP-binding/permease protein ComA|POSITIVE:POSITIVE|[39873,41901]|2029
HSP  1	e-value: 4.0E-19	bit: 97.6	Len: 49	Query Start:152	Query End:200	Subject Strand: POSITIVE	Subject Start: 1860	Subject End: 1908
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 2.0E-18	bit: 95.6	Len: 48	Query Start:209	Query End:256	Subject Strand: POSITIVE	Subject Start: 1963	Subject End: 2010
................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_0091_SP_0092|ABC transporter, permease protein:ABC transporter, substrate-binding protein|POSITIVE:POSITIVE|[94866,95122]|257
HSP  1	e-value: 4.0E-19	bit: 97.6	Len: 53	Query Start:148	Query End:200	Subject Strand: POSITIVE	Subject Start: 50	Subject End: 102
...................................................................................................................................................gttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
...................................................................................................................................................gttaatactcttcgaaaatcaaattcaaaccgcgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 6.0E-15	bit: 83.8	Len: 50	Query Start:209	Query End:258	Subject Strand: POSITIVE	Subject Start: 159	Subject End: 208
................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
................................................................................................................................................................................................................cagcctgcggctagttttctagtttgctctttgatttttattgagtataa.................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003098_spr1638_spr1639|hypothetical protein:Catabolite control protein|NEGATIVE:NEGATIVE|[1611092,1611987]|896
HSP  1	e-value: 2.0E-18	bit: 95.6	Len: 48	Query Start:209	Query End:256	Subject Strand: POSITIVE	Subject Start: 249	Subject End: 296
................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 4.0E-7	bit: 58.0	Len: 49	Query Start:152	Query End:200	Subject Strand: POSITIVE	Subject Start: 101	Subject End: 148
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccgcgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_1840_SP_1841|ABC transporter, ATP-binding/permease protein:hypothetical protein|NEGATIVE:NEGATIVE|[1751943,1752147]|205
HSP  1	e-value: 2.0E-18	bit: 95.6	Len: 48	Query Start:209	Query End:256	Subject Strand: NEGATIVE	Subject Start: 39	Subject End: 86
................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 48	Query Start:153	Query End:200	Subject Strand: NEGATIVE	Subject Start: 141	Subject End: 187
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactcttcgaaaatctc-ttcaaaccgcgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_008533_SPD_0729_SPD_0730|hemolysin-related protein:purine nucleoside phosphorylase|POSITIVE:POSITIVE|[743379,744035]|657
HSP  1	e-value: 1.0E-16	bit: 89.7	Len: 45	Query Start:212	Query End:256	Subject Strand: NEGATIVE	Subject Start: 99	Subject End: 143
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 4.0E-7	bit: 58.0	Len: 49	Query Start:147	Query End:195	Subject Strand: NEGATIVE	Subject Start: 206	Subject End: 253
..................................................................................................................................................tgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttg................................................................................................................................................................................................................................................................................................................................................................................................................
..................................................................................................................................................tgtttatactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttg................................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003098_spr1924_spr1925|aspartyl-tRNA synthetase:hypothetical protein|NEGATIVE:NEGATIVE|[1908629,1908979]|351
HSP  1	e-value: 1.0E-16	bit: 89.7	Len: 49	Query Start:212	Query End:260	Subject Strand: POSITIVE	Subject Start: 273	Subject End: 321
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtataata...............................................................................................................................................................................................................................................................................................................................................
...................................................................................................................................................................................................................cctgcggctagcttcctagtttgctctttgattttcattgagtataata...............................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 6.0E-6	bit: 54.0	Len: 51	Query Start:150	Query End:200	Subject Strand: POSITIVE	Subject Start: 120	Subject End: 169
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003098_spr0737_spr0738|Conserved hypothetical protein, truncation:Purine nucleoside phosphorylase (inosine phosphorylase)|POSITIVE:POSITIVE|[735848,736504]|657
HSP  1	e-value: 1.0E-16	bit: 89.7	Len: 45	Query Start:212	Query End:256	Subject Strand: NEGATIVE	Subject Start: 99	Subject End: 143
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 4.0E-7	bit: 58.0	Len: 49	Query Start:147	Query End:195	Subject Strand: NEGATIVE	Subject Start: 206	Subject End: 253
..................................................................................................................................................tgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttg................................................................................................................................................................................................................................................................................................................................................................................................................
..................................................................................................................................................tgtttatactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttg................................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_2114_SP_2115|aspartyl-tRNA synthetase:hypothetical protein|NEGATIVE:NEGATIVE|[2029292,2029642]|351
HSP  1	e-value: 1.0E-16	bit: 89.7	Len: 49	Query Start:212	Query End:260	Subject Strand: POSITIVE	Subject Start: 273	Subject End: 321
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtataata...............................................................................................................................................................................................................................................................................................................................................
...................................................................................................................................................................................................................cctgcggctagcttcctagtttgctctttgattttcattgagtataata...............................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 6.0E-6	bit: 54.0	Len: 51	Query Start:150	Query End:200	Subject Strand: POSITIVE	Subject Start: 120	Subject End: 169
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_008533_SPD_0556_SPD_0558|hypothetical protein:cell wall-associated serine protease PrtA|POSITIVE:POSITIVE|[568719,569947]|1229
HSP  1	e-value: 4.0E-16	bit: 87.7	Len: 44	Query Start:212	Query End:255	Subject Strand: POSITIVE	Subject Start: 961	Subject End: 1004
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagta....................................................................................................................................................................................................................................................................................................................................................
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagta....................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 6.0E-9	bit: 63.9	Len: 48	Query Start:152	Query End:199	Subject Strand: POSITIVE	Subject Start: 810	Subject End: 856
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003098_spr0560_spr0561|hypothetical protein:Cell wall-associated serine proteinase precursor PrtA|POSITIVE:POSITIVE|[561687,562417]|731
HSP  1	e-value: 4.0E-16	bit: 87.7	Len: 44	Query Start:212	Query End:255	Subject Strand: POSITIVE	Subject Start: 463	Subject End: 506
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagta....................................................................................................................................................................................................................................................................................................................................................
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagta....................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 6.0E-9	bit: 63.9	Len: 48	Query Start:152	Query End:199	Subject Strand: POSITIVE	Subject Start: 312	Subject End: 358
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_1706_SP_1707|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1611668,1611851]|184
HSP  1	e-value: 2.0E-15	bit: 85.7	Len: 43	Query Start:214	Query End:256	Subject Strand: NEGATIVE	Subject Start: 32	Subject End: 74
.....................................................................................................................................................................................................................tgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................................................................................tgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 44	Query Start:152	Query End:195	Subject Strand: NEGATIVE	Subject Start: 139	Subject End: 181
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttg................................................................................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttg................................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_0640_SP_0641|hypothetical protein:serine protease, subtilase family|POSITIVE:POSITIVE|[603164,603894]|731
HSP  1	e-value: 2.0E-15	bit: 85.7	Len: 43	Query Start:213	Query End:255	Subject Strand: POSITIVE	Subject Start: 464	Subject End: 506
....................................................................................................................................................................................................................ctgcggctagtttcctagtttgctctttgattttcattgagta....................................................................................................................................................................................................................................................................................................................................................
....................................................................................................................................................................................................................ctgcggctagtttcctagtttgctctttgattttcattgagta....................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 6.0E-9	bit: 63.9	Len: 48	Query Start:152	Query End:199	Subject Strand: POSITIVE	Subject Start: 312	Subject End: 358
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_0631_SP_0633|50S ribosomal protein L1:hypothetical protein|POSITIVE:POSITIVE|[598117,598657]|541
HSP  1	e-value: 2.0E-15	bit: 85.7	Len: 47	Query Start:212	Query End:258	Subject Strand: POSITIVE	Subject Start: 491	Subject End: 537
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttggttttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 4.0E-10	bit: 67.9	Len: 50	Query Start:150	Query End:199	Subject Strand: POSITIVE	Subject Start: 338	Subject End: 386
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_008533_SPD_1432_SPD_1433|UDP-glucose 4-epimerase:FAD dependent oxidoreductase|NEGATIVE:NEGATIVE|[1449278,1449577]|300
HSP  1	e-value: 6.0E-15	bit: 83.8	Len: 46	Query Start:152	Query End:197	Subject Strand: POSITIVE	Subject Start: 105	Subject End: 150
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgcc..............................................................................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatccaattcaaaccacgtcaacgtcgccttgcc..............................................................................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 2.0E-9	bit: 65.9	Len: 41	Query Start:215	Query End:255	Subject Strand: POSITIVE	Subject Start: 260	Subject End: 300
......................................................................................................................................................................................................................gcggctagtttcctagtttgctctttgattttcattgagta....................................................................................................................................................................................................................................................................................................................................................
......................................................................................................................................................................................................................gcggctagttacctagtttgttctttgattttcattgagta....................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003098_spr1460_spr1461|UDP-glucose 4-epimerase:hypothetical protein|NEGATIVE:NEGATIVE|[1441747,1442046]|300
HSP  1	e-value: 6.0E-15	bit: 83.8	Len: 46	Query Start:152	Query End:197	Subject Strand: POSITIVE	Subject Start: 105	Subject End: 150
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgcc..............................................................................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatccaattcaaaccacgtcaacgtcgccttgcc..............................................................................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 2.0E-9	bit: 65.9	Len: 41	Query Start:215	Query End:255	Subject Strand: POSITIVE	Subject Start: 260	Subject End: 300
......................................................................................................................................................................................................................gcggctagtttcctagtttgctctttgattttcattgagta....................................................................................................................................................................................................................................................................................................................................................
......................................................................................................................................................................................................................gcggctagttacctagtttgttctttgattttcattgagta....................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_0493_SP_0494|DNA-directed RNA polymerase subunit delta:CTP synthetase|POSITIVE:POSITIVE|[470342,470730]|389
HSP  1	e-value: 6.0E-15	bit: 83.8	Len: 50	Query Start:209	Query End:258	Subject Strand: NEGATIVE	Subject Start: 127	Subject End: 176
................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
................................................................................................................................................................................................................cagcctacggctagtttcctagcttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 2.0E-8	bit: 61.9	Len: 51	Query Start:150	Query End:200	Subject Strand: NEGATIVE	Subject Start: 233	Subject End: 282
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatctc-ttcaaaccgcgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_0033_SP_0034|hypothetical protein:membrane protein|POSITIVE:NEGATIVE|[34691,35008]|318
HSP  1	e-value: 6.0E-15	bit: 83.8	Len: 42	Query Start:217	Query End:258	Subject Strand: NEGATIVE	Subject Start: 32	Subject End: 73
........................................................................................................................................................................................................................ggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................................................................................ggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 6.0E-9	bit: 63.9	Len: 48	Query Start:153	Query End:200	Subject Strand: NEGATIVE	Subject Start: 272	Subject End: 318
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_008533_SPD_1492_SPD_1493|hypothetical protein:sugar ABC transporter, permease protein|NEGATIVE:NEGATIVE|[1508518,1508789]|272
HSP  1	e-value: 3.0E-14	bit: 81.8	Len: 105	Query Start:153	Query End:257	Subject Strand: NEGATIVE	Subject Start: 168	Subject End: 272
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtata..................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactctgcgaaaatcgaatgcaaactacgtcagcttcaccttgccatacttaagtattgcctgcggttagcttcctagtttgttcttcaattttcattgagtata..................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003098_spr1524_spr1525|hypothetical protein:ABC transporter membrane-spanning permease - sugar transport|NEGATIVE:NEGATIVE|[1500987,1501258]|272
HSP  1	e-value: 3.0E-14	bit: 81.8	Len: 105	Query Start:153	Query End:257	Subject Strand: NEGATIVE	Subject Start: 168	Subject End: 272
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtata..................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactctgcgaaaatcgaatgcaaactacgtcagcttcaccttgccatacttaagtattgcctgcggttagcttcctagtttgttcttcaattttcattgagtata..................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_1516_SP_1517|acetyltransferase, GNAT family:transcription elongation factor GreA|NEGATIVE:NEGATIVE|[1424331,1424807]|477
HSP  1	e-value: 3.0E-14	bit: 81.8	Len: 45	Query Start:212	Query End:256	Subject Strand: NEGATIVE	Subject Start: 91	Subject End: 135
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgatttttattgagtat...................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 48	Query Start:153	Query End:200	Subject Strand: NEGATIVE	Subject Start: 374	Subject End: 420
........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
........................................................................................................................................................tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_0834_SP_0835|hemolysin-related protein:purine nucleoside phosphorylase, family 1|POSITIVE:POSITIVE|[783000,783652]|653
HSP  1	e-value: 3.0E-14	bit: 81.8	Len: 45	Query Start:212	Query End:256	Subject Strand: NEGATIVE	Subject Start: 99	Subject End: 143
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
...................................................................................................................................................................................................................cctgcggctagtttcttagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 4.0E-7	bit: 58.0	Len: 49	Query Start:147	Query End:195	Subject Strand: NEGATIVE	Subject Start: 206	Subject End: 253
..................................................................................................................................................tgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttg................................................................................................................................................................................................................................................................................................................................................................................................................
..................................................................................................................................................tgtttatactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttg................................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_008533_SPD_0099_SPD_0101|capsular polysaccharide biosynthesis protein:hydrolase, haloacid dehalogenase-like family protein|POSITIVE:NEGATIVE|[101068,101462]|395
HSP  1	e-value: 1.0E-13	bit: 79.8	Len: 48	Query Start:209	Query End:256	Subject Strand: POSITIVE	Subject Start: 306	Subject End: 353
................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
................................................................................................................................................................................................................cagcccgcagctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 2.0E-9	bit: 65.9	Len: 49	Query Start:152	Query End:200	Subject Strand: POSITIVE	Subject Start: 67	Subject End: 114
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003098_spr0092_spr0093|CapD protein, required for the biosynthesis of type 1 capsular polysaccharide:Phosphoglycolate phosphatase|POSITIVE:NEGATIVE|[101068,101462]|395
HSP  1	e-value: 1.0E-13	bit: 79.8	Len: 48	Query Start:209	Query End:256	Subject Strand: POSITIVE	Subject Start: 306	Subject End: 353
................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
................................................................................................................................................................................................................cagcccgcagctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 2.0E-9	bit: 65.9	Len: 49	Query Start:152	Query End:200	Subject Strand: POSITIVE	Subject Start: 67	Subject End: 114
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003098_spr0556_spr0557|50S ribosomal protein L1:ABC transporter ATP-binding protein - role in polysaccharide efflux|POSITIVE:POSITIVE|[556072,558588]|2517
HSP  1	e-value: 4.0E-13	bit: 77.8	Len: 47	Query Start:212	Query End:258	Subject Strand: POSITIVE	Subject Start: 1061	Subject End: 1107
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
...................................................................................................................................................................................................................cctgaggctagtttcctagtttgctctttggttttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 9.0E-8	bit: 60.0	Len: 50	Query Start:150	Query End:199	Subject Strand: POSITIVE	Subject Start: 593	Subject End: 641
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactctttgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_1717_SP_1718|ABC transporter, ATP-binding protein:hypothetical protein|NEGATIVE:NEGATIVE|[1621815,1622204]|390
HSP  1	e-value: 4.0E-13	bit: 77.8	Len: 43	Query Start:216	Query End:258	Subject Strand: NEGATIVE	Subject Start: 114	Subject End: 156
.......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................................................................................cggctagcttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 6.0E-6	bit: 54.0	Len: 51	Query Start:150	Query End:200	Subject Strand: NEGATIVE	Subject Start: 264	Subject End: 313
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatctc-ttcaaaccacgtcagcttcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_1696_SP_1697|hypothetical protein:ATP-dependent DNA helicase RecG|NEGATIVE:NEGATIVE|[1600719,1600952]|234
HSP  1	e-value: 4.0E-13	bit: 77.8	Len: 47	Query Start:212	Query End:258	Subject Strand: POSITIVE	Subject Start: 170	Subject End: 216
...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
...................................................................................................................................................................................................................cctgcggttagcttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 52	Query Start:149	Query End:200	Subject Strand: POSITIVE	Subject Start: 15	Subject End: 65
....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
....................................................................................................................................................ttaatactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_0103_SP_0104|capsular polysaccharide biosynthesis protein, putative:hydrolase, haloacid dehalogenase-like family|POSITIVE:NEGATIVE|[106519,106955]|437
HSP  1	e-value: 4.0E-13	bit: 77.8	Len: 39	Query Start:218	Query End:256	Subject Strand: POSITIVE	Subject Start: 357	Subject End: 395
.........................................................................................................................................................................................................................gctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
.........................................................................................................................................................................................................................gctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 2.0E-9	bit: 65.9	Len: 49	Query Start:152	Query End:200	Subject Strand: POSITIVE	Subject Start: 67	Subject End: 114
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_008533_SPD_0569_SPD_0570|sodium/hydrogen exchanger family protein:ribonuclease BN, putative|POSITIVE:POSITIVE|[591916,592093]|178
HSP  1	e-value: 2.0E-12	bit: 75.8	Len: 50	Query Start:209	Query End:258	Subject Strand: POSITIVE	Subject Start: 106	Subject End: 155
................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
................................................................................................................................................................................................................cagcttgcggctagctttctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 52	Query Start:149	Query End:200	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 51
....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
....................................................................................................................................................ttaatactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_008533_SPD_0441_SPD_0442|DNA-directed RNA polymerase, delta subunit, putative:CTP synthase|POSITIVE:POSITIVE|[444164,444552]|389
HSP  1	e-value: 2.0E-12	bit: 75.8	Len: 50	Query Start:209	Query End:258	Subject Strand: NEGATIVE	Subject Start: 127	Subject End: 176
................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
................................................................................................................................................................................................................cagcctacggctagtttcctagcttgcactttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 2.0E-8	bit: 61.9	Len: 51	Query Start:150	Query End:200	Subject Strand: NEGATIVE	Subject Start: 233	Subject End: 282
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatctc-ttcaaaccgcgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003098_spr0573_spr0574|Na+/H+ antiporter:hypothetical protein|POSITIVE:POSITIVE|[584385,584547]|163
HSP  1	e-value: 2.0E-12	bit: 75.8	Len: 50	Query Start:209	Query End:258	Subject Strand: POSITIVE	Subject Start: 106	Subject End: 155
................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
................................................................................................................................................................................................................cagcttgcggctagctttctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 52	Query Start:149	Query End:200	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 51
....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
....................................................................................................................................................ttaatactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003098_spr0437_spr0438|DNA-directed RNA polymerase subunit delta:CTP synthetase|POSITIVE:POSITIVE|[436634,437022]|389
HSP  1	e-value: 2.0E-12	bit: 75.8	Len: 50	Query Start:209	Query End:258	Subject Strand: NEGATIVE	Subject Start: 127	Subject End: 176
................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
................................................................................................................................................................................................................cagcctacggctagtttcctagcttgcactttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 2.0E-8	bit: 61.9	Len: 51	Query Start:150	Query End:200	Subject Strand: NEGATIVE	Subject Start: 233	Subject End: 282
.....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
.....................................................................................................................................................taatactcttcgaaaatctc-ttcaaaccgcgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_1607_SP_1608|UDP-glucose 4-epimerase:oxidoreductase, DadA family protein|NEGATIVE:NEGATIVE|[1509447,1509746]|300
HSP  1	e-value: 2.0E-12	bit: 75.8	Len: 46	Query Start:152	Query End:197	Subject Strand: POSITIVE	Subject Start: 105	Subject End: 150
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgcc..............................................................................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatccaattcaaactacgtcaacgtcgccttgcc..............................................................................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 2.0E-9	bit: 65.9	Len: 41	Query Start:215	Query End:255	Subject Strand: POSITIVE	Subject Start: 260	Subject End: 300
......................................................................................................................................................................................................................gcggctagtttcctagtttgctctttgattttcattgagta....................................................................................................................................................................................................................................................................................................................................................
......................................................................................................................................................................................................................gcggctagtttcctagtttgttctttgatttttattgagta....................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_0655_SP_0657|sodium/hydrogen exchanger family protein:ribonuclease BN, putative|POSITIVE:POSITIVE|[627719,627896]|178
HSP  1	e-value: 2.0E-12	bit: 75.8	Len: 50	Query Start:209	Query End:258	Subject Strand: POSITIVE	Subject Start: 106	Subject End: 155
................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
................................................................................................................................................................................................................cagcttgcggctagctttctagtttgctctttgattttcattgagtataa.................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 52	Query Start:149	Query End:200	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 51
....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
....................................................................................................................................................ttaatactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgta...........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_008533_SPD_1408_SPD_1409|hypothetical protein:sugar ABC transporter, ATP-binding protein|NEGATIVE:NEGATIVE|[1427612,1428111]|500
HSP  1	e-value: 6.0E-12	bit: 73.8	Len: 41	Query Start:216	Query End:256	Subject Strand: NEGATIVE	Subject Start: 201	Subject End: 241
.......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgatttccattgagtat...................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 6.0E-12	bit: 73.8	Len: 53	Query Start:149	Query End:201	Subject Strand: NEGATIVE	Subject Start: 303	Subject End: 354
....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtac..........................................................................................................................................................................................................................................................................................................................................................................................................
....................................................................................................................................................ttaatactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgtac..........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003098_spr1436_spr1437|hypothetical protein:ABC transporter ATP-binding protein - multiple sugar transport|NEGATIVE:NEGATIVE|[1420081,1420580]|500
HSP  1	e-value: 6.0E-12	bit: 73.8	Len: 41	Query Start:216	Query End:256	Subject Strand: NEGATIVE	Subject Start: 201	Subject End: 241
.......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgatttccattgagtat...................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 6.0E-12	bit: 73.8	Len: 53	Query Start:149	Query End:201	Subject Strand: NEGATIVE	Subject Start: 303	Subject End: 354
....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtac..........................................................................................................................................................................................................................................................................................................................................................................................................
....................................................................................................................................................ttaatactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgtac..........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_1579_SP_1580|hypothetical protein:sugar ABC transporter, ATP-binding protein|NEGATIVE:NEGATIVE|[1484730,1485134]|405
HSP  1	e-value: 6.0E-12	bit: 73.8	Len: 41	Query Start:216	Query End:256	Subject Strand: NEGATIVE	Subject Start: 106	Subject End: 146
.......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgatttccattgagtat...................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 6.0E-12	bit: 73.8	Len: 53	Query Start:149	Query End:201	Subject Strand: NEGATIVE	Subject Start: 208	Subject End: 259
....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtac..........................................................................................................................................................................................................................................................................................................................................................................................................
....................................................................................................................................................ttaatactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgtac..........................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_003028_SP_0120_SP_0121|glucose-inhibited division protein A:metallo-beta-lactamase superfamily protein|POSITIVE:NEGATIVE|[124699,125050]|352
HSP  1	e-value: 6.0E-12	bit: 73.8	Len: 41	Query Start:216	Query End:256	Subject Strand: POSITIVE	Subject Start: 248	Subject End: 288
.......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................................................................................cggctagcttcctagtttgctctttgattttcattgagtat...................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 4.0E-7	bit: 58.0	Len: 49	Query Start:152	Query End:200	Subject Strand: POSITIVE	Subject Start: 138	Subject End: 185
.......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccgcgtcaacgtcgccttgccgta...........................................................................................................................................................................................................................................................................................................................................................................................................


Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
UUUUAUAGGUGAGUUAUUGAUUAUCUCAACUAUCAAAUUUUAAGUAAAUAAUUUCAAAAUCAGAAAGGGAUUGCUUUAUGCAGUUCCUUUUUAAUGUAAAAGGAGUGGAAUCAUAGCGUUUCUAAAUUGUUAAUACUCUUCGAAAAUCAAAUUCAAACCACGUCAACGUCGCCUUGCCGUACUCAAGUACAGCCUGCGGCUAGUUUCCUAGUUUGCUCUUUGAUUUUCAUUGAGUAUAAUAAUUCAAAACUGAUUGUGAUGGGACUAUUCUAGCUUUAGAAUCCUUCAAAAAUUAAAAUUUAAGGCAAUCAAUGUUUUAGAAGAGUGCGAAAACAUUUAGUUUAUAGGAAUUCUAGAUCUAGAAUUGCAUAGAUAUUUAUGAAGUUAGAGUAUUCGAUAGUUAGGAUUGUUCUAUUCUGAAAGAUUUGAGCUGUCAAUUGUAUAG
(((.((((.((((.((.....)).)))).)))).))).....((((..((((((((.....(((((((((((((.....))))))))))))).((((((....(((...((((((((((((...((((((((.(((((...((((((((((..(((((...(..((((((((...((.((((....)))).))..)))))..)))..)..)))))...))))))))))...)))))))))))))..)))).).)))))))...)))..(((((.(((((((((((....((((((((.(((((((((.....)))))))))...((......)).))))))))..))).)))))))).))))).)))))).........))))))))...)))).(((((((..((((.(((......))).))))..))))))).......... (-116.30)

Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
CUAUACAAUUGACAGCUCAAAUCUUUCAGAAUAGAACAAUCCUAACUAUCGAAUACUCUAACUUCAUAAAUAUCUAUGCAAUUCUAGAUCUAGAAUUCCUAUAAACUAAAUGUUUUCGCACUCUUCUAAAACAUUGAUUGCCUUAAAUUUUAAUUUUUGAAGGAUUCUAAAGCUAGAAUAGUCCCAUCACAAUCAGUUUUGAAUUAUUAUACUCAAUGAAAAUCAAAGAGCAAACUAGGAAACUAGCCGCAGGCUGUACUUGAGUACGGCAAGGCGACGUUGACGUGGUUUGAAUUUGAUUUUCGAAGAGUAUUAACAAUUUAGAAACGCUAUGAUUCCACUCCUUUUACAUUAAAAAGGAACUGCAUAAAGCAAUCCCUUUCUGAUUUUGAAAUUAUUUACUUAAAAUUUGAUAGUUGAGAUAAUCAAUAACUCACCUAUAAAA
.......(((((.........(((........)))...(((.((((((((((((.......................((.(((((((...((((((.(((.((((......((((..(((.((............)).)))...)))).......)))).)))))))))...))))))).))....(((.(((((((((((((((.((((((((..(((((((((((...((((((((..(((..(((....(((((((....)))))))..)))...)))..).)))))))..)))))))))))..))))).))).)))))))))..((((((.......(((((((......)))))))....)))..))).........)))))).)))...............)))))))))))).)))..)))))............... (-104.72)

Find mRNA Target Using  Conserved IGS================================================
5'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
1061	210	161	217	168	smit:SMT_662|5end_A/G-specific_adenine_glycosylase_573827..574057_NEGATIVE
1017	220	171	210	161	smit:SMT_1535|5end_exodeoxyribonuclease_V_alpha_chain_1518067..1518297_POSITIVE
989	220	171	192	143	smit:SMT_2133|5end_hypothetical_protein_2014007..2014237_NEGATIVE
989	220	171	192	143	smit:SMT_872|5end_hypothetical_protein_820618..820848_NEGATIVE
989	220	171	192	143	smit:SMT_385|5end_hypothetical_protein_319895..320125_POSITIVE
921	190	141	227	178	smit:SMT_1139|5end_rRNA_(guanine-N1-)-methyltransferase_1079755..1079985_POSITIVE
817	236	191	97	52	smit:SMT_123|5end_hypothetical_protein_75391..75621_POSITIVE
774	237	191	98	52	smit:SMT_1494|5end_nucleoside_diphosphate_kinase_1479500..1479730_POSITIVE
773	237	191	98	52	smit:SMT_1911|5end_hypothetical_protein_1857614..1857844_POSITIVE
714	239	191	100	52	smit:SMT_867|5end_hypothetical_protein_816316..816546_POSITIVE
701	180	133	198	152	smit:SMT_236|5end_ribosomal_small_subunit_pseudouridine_synthase_A_174625..174855_POSITIVE
695	237	191	98	52	smit:SMT_2086|5end_hypothetical_protein_1983696..1983926_NEGATIVE
628	237	191	201	155	smit:SMT_740|5end_50S_ribosomal_protein_L10_644116..644346_NEGATIVE
590	181	150	155	124	smit:SMT_604|5end_DNA_polymerase_III,_epsilon_chain_518693..518923_POSITIVE
512	177	133	210	167	smit:SMT_218|5end_undecaprenyl_pyrophosphate_synthetase_150155..150385_POSITIVE
495	165	132	228	195	smit:SMT_826|5end_hypothetical_protein_750022..750252_NEGATIVE
470	176	131	173	121	smit:SMT_1783|5end_peptide_methionine_sulfoxide_reductase_1759756..1759986_POSITIVE
446	168	121	231	190	smit:SMT_496|5end_superoxide_dismutase,_manganese-dependent_430433..430663_POSITIVE
399	177	133	207	165	smit:SMT_1592|5end_putative_hemolysin_1579655..1579885_POSITIVE
394	197	151	231	174	smit:SMT_1541|5end_isopentenyl-diphosphate_delta-isomerase_1526093..1526323_NEGATIVE

3'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
989	220	171	77	28	smit:SMT_2134|3end_hypothetical_protein_2014122..2014272_NEGATIVE
989	220	171	77	28	smit:SMT_873|3end_hypothetical_protein_820733..820883_NEGATIVE
989	220	171	77	28	smit:SMT_384|3end_hypothetical_protein_319860..320010_POSITIVE
911	220	171	74	25	smit:SMT_1670|3end_K02030_polar_amino_acid_transport_system_substrate-binding_protein_1659295..1659445_POSITIVE
911	220	171	53	4	smit:SMT_1068|3end_ATP-dependent_DNA_helicase_RecG_1008986..1009136_POSITIVE
863	230	183	48	1	smit:SMT_663|3end_phosphate_acetyltransferase_574016..574166_NEGATIVE
833	237	191	77	31	smit:SMT_235|3end_hypothetical_protein_174391..174541_POSITIVE
830	237	191	91	45	smit:SMT_1075|3end_hypothetical_protein_1013870..1014020_POSITIVE
822	239	191	59	11	smit:SMT_1217|3end_hypothetical_protein_1176166..1176316_NEGATIVE
779	220	171	74	25	smit:SMT_1689|3end_PTS_enzyme,_maltose-and_glucose-specific,_factor_II_homologue_1673139..1673289_POSITIVE
773	237	191	58	12	smit:SMT_1910|3end_pyruvate-formate_lyase_activating_enzyme_1857654..1857804_POSITIVE
772	239	191	55	7	smit:SMT_916|3end_3-hydroxy-3-methylglutaryl-CoA_reductase_868730..868880_NEGATIVE
767	237	191	87	41	smit:SMT_451|3end_thiamine-phosphate_pyrophosphorylase_389647..389797_POSITIVE
727	237	191	91	45	smit:SMT_951|3end_oxidoreductase,_DadA_family_protein/D-amino_acid_oxidase_898995..899145_NEGATIVE
715	234	191	88	45	smit:SMT_1625|3end_DNA_polymerase_IV_1615066..1615216_POSITIVE
664	237	197	41	1	smit:SMT_1356|3end_fibronectin-binding_protein-like_protein_A_1334269..1334419_POSITIVE
652	237	192	46	1	smit:SMT_1535|3end_exodeoxyribonuclease_V_alpha_chain_1520513..1520663_POSITIVE
629	180	133	81	35	smit:SMT_131|3end_phosphatase,_putative_83031..83181_NEGATIVE
629	180	133	146	100	smit:SMT_123|3end_hypothetical_protein_75623..75773_POSITIVE
470	176	131	77	25	smit:SMT_1782|3end_hypothetical_protein_1759740..1759890_POSITIVE