Origin IGS: ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 aaattactacctcattatgtttaaattattagaaatattataccatattaaacaaaattatgattttgatttttctttaatattatttatccaatcatttttactggaatctaacatagaataatactatcctatacaattgacagctcaaatctttcagaatagaacaatcctaactatcgaatactctaacttcataaatatctatgcaattctagatctagaattcctataaactaaatgttttcgcactcttctaaaacattgattgccttaaattttaatttttgaaggattctaaagctagaatagtcccatcacaatcagttttgaattattatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagtattaacaatttagaaacgctatgattccactccttttacattaaaaaggaactgcataaagcaatccctttctgattttgaaattatttacttaaaatttgatagttgagataatcaataactcacctataaaagaaatgataggatgattcc Mask Tandem Repeat Region ================================================ ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt Find is-nt database================================================ Query_seq: SMT_1393:SMT_1394|SMT_1393:SMT_1394:hypothetical protein:hypothetical protein predicted by Glimmer/Critica:->->:1369621..1370215 595 ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: SMT_1393:SMT_1394|SMT_1393:SMT_1394:hypothetical protein:hypothetical protein predicted by Glimmer/Critica:->->:1369621..1370215 595 ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: SMT_1393:SMT_1394|SMT_1393:SMT_1394:hypothetical protein:hypothetical protein predicted by Glimmer/Critica:->->:1369621..1370215 595 ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt Predict ORF larger than 30AA ================================================ Protein_Len: 48 Strand: + Start: 146 End: 289 ................................................................................................................................................. M L I L F E N Q I Q T T S T S P C R T Q V Q P A A S F L V C S L I F I E Y N N S K L I V M G L F .................................................................................................................................................................................................................................................................................................................. Protein_Len: 36 Strand: - Start: 475 End: 582 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... E I N S E L L F S Q I F L I L S F D F D Y N Q K I H Y L I E L L K F M M ............. Protein_Len: 33 Strand: - Start: 364 End: 462 ........................................................................................................................................................................................................................................................................................................................................................................... L F E L D L I A Y I N I F N S Y E I T L I T R N Q F I Q A T L Q M ..................................................................................................................................... ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: + Score: 82 Start: 230 End: 259 .....................................................................................................................................................................................................................................GTTTGCTCTTTGATTTTCATTGAGTATAAT................................................................................................................................................................................................................................................................................................................................................ PromScan Matrix: RpoD-17 Strand: - Score: 82 Start: 428 End: 457 ...........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACAGCTCAAATCTTTCAGAATAGAAC.......................................................................................................................................... PromScan Matrix: RpoD-17 Strand: + Score: 81 Start: 272 End: 301 ...............................................................................................................................................................................................................................................................................ATTGTGATGGGACTATTCTAGCTTTAGAAT...................................................................................................................................................................................................................................................................................................... Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt Predict TransTerm conf > 70================================================ TransTerm Strand: + Conf: 73 HP_score: -5.4 Tail_Score: -4.8048 Start: 86 End: 106 Full_Region: TTTCAAAATCAGAAA GGGATTGC TTTAT GCAGTTCC TTTTTAATGTAAAAG .....................................................................................GGGATTGCTTTATGCAGTTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Find igs database================================================ Query_seq: SMT_1393:SMT_1394|SMT_1393:SMT_1394:hypothetical protein:hypothetical protein predicted by Glimmer/Critica:->->:1369621..1370215 595 ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt Intra-Species Hit: Count: 39 Min: 1 Max: 595 Len: 595 Subject: smit_SMT_1393_SMT_1394|hypothetical protein:hypothetical protein predicted by Glimmer/Critica|POSITIVE:POSITIVE|[1369621,1370215]|595 HSP 1 e-value: 0.0 bit: 1179.0 Len: 595 Query Start:1 Query End:595 Subject Strand: POSITIVE Subject Start: 1 Subject End: 595 ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt ggaatcatcctatcatttcttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataataattcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtataggatagtattattctatgttagattccagtaaaaatgattggataaataatattaaagaaaaatcaaaatcataattttgtttaatatggtataatatttctaataatttaaacataatgaggtagtaattt Subject: smit_SMT_1138_SMT_1139|hypothetical protein:rRNA (guanine-N1-)- methyltransferase|NEGATIVE:POSITIVE|[1079638, 1079894]|257 HSP 1 e-value: 2.0E-55 bit: 218.0 Len: 110 Query Start:150 Query End:259 Subject Strand: NEGATIVE Subject Start: 72 Subject End: 181 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataat................................................................................................................................................................................................................................................................................................................................................ .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataat................................................................................................................................................................................................................................................................................................................................................ Subject: smit_SMT_662_SMT_663|A/G-specific adenine glycosylase:phosphate acetyltransferase|NEGATIVE:NEGATIVE|[573918,574105]|188 HSP 1 e-value: 4.0E-53 bit: 210.0 Len: 106 Query Start:153 Query End:258 Subject Strand: POSITIVE Subject Start: 50 Subject End: 155 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: smit_SMT_259_SMT_260|dipeptide/tripeptide permease:phage transcriptional repressor|POSITIVE:POSITIVE|[199242,199609]|368 HSP 1 e-value: 4.0E-53 bit: 210.0 Len: 110 Query Start:149 Query End:258 Subject Strand: POSITIVE Subject Start: 101 Subject End: 210 ....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccgcgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: smit_SMT_1601_SMT_1602|hypothetical protein predicted by Glimmer/Critica:hypothetical protein|POSITIVE:POSITIVE|[1592204,1592524]|321 HSP 1 e-value: 2.0E-52 bit: 208.0 Len: 105 Query Start:152 Query End:256 Subject Strand: POSITIVE Subject Start: 191 Subject End: 295 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... Subject: smit_SMT_129_SMT_130|putative glycosyltransferase:capsular polysaccharide biosynthesis protein|POSITIVE:POSITIVE|[80944,81134]|191 HSP 1 e-value: 1.0E-50 bit: 202.0 Len: 110 Query Start:150 Query End:259 Subject Strand: POSITIVE Subject Start: 50 Subject End: 159 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataat................................................................................................................................................................................................................................................................................................................................................ .....................................................................................................................................................taatgctcttcgaaaatcaaattcaaaccgcgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataat................................................................................................................................................................................................................................................................................................................................................ Subject: smit_SMT_698_SMT_699|uracil permease:K03106 signal recognition particle, subunit SRP54|POSITIVE:NEGATIVE|[609830,610030]|201 HSP 1 e-value: 2.0E-49 bit: 198.0 Len: 104 Query Start:153 Query End:256 Subject Strand: POSITIVE Subject Start: 1 Subject End: 104 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgttctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... Subject: smit_SMT_482_SMT_483|hypothetical protein predicted by Glimmer/Critica:transcriptional activator TipA, putative|NEGATIVE:POSITIVE|[418627,418966]|340 HSP 1 e-value: 1.0E-47 bit: 192.0 Len: 109 Query Start:150 Query End:258 Subject Strand: POSITIVE Subject Start: 222 Subject End: 330 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: smit_SMT_1963_SMT_1964|ribonuclease BN, putative:sodium/hydrogen exchanger family protein|NEGATIVE:NEGATIVE|[1896553,1896685]|133 HSP 1 e-value: 4.0E-47 bit: 190.0 Len: 110 Query Start:149 Query End:258 Subject Strand: NEGATIVE Subject Start: 24 Subject End: 133 ....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcatkgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: smit_SMT_1534_SMT_1535|signal peptidase I:exodeoxyribonuclease V alpha chain|POSITIVE:POSITIVE|[1517973,1518206]|234 HSP 1 e-value: 2.0E-46 bit: 188.0 Len: 111 Query Start:148 Query End:258 Subject Strand: NEGATIVE Subject Start: 97 Subject End: 207 ...................................................................................................................................................gttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ...................................................................................................................................................gttaatactcttcgaaaatcaaattcaaaccacgtcagtttcgccttgccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: smit_SMT_1809_SMT_1810|MutT/NUDIX family protein:hypothetical protein|POSITIVE:POSITIVE|[1785195,1785358]|164 HSP 1 e-value: 6.0E-46 bit: 186.0 Len: 106 Query Start:153 Query End:258 Subject Strand: POSITIVE Subject Start: 1 Subject End: 106 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcagcttcgccttgccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: smit_SMT_1139_SMT_1140|rRNA (guanine-N1-)-methyltransferase:glycogen phosphorylase|POSITIVE:NEGATIVE|[1080744,1081405]|662 HSP 1 e-value: 6.0E-46 bit: 186.0 Len: 106 Query Start:153 Query End:258 Subject Strand: NEGATIVE Subject Start: 557 Subject End: 662 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcagcgttgccttgccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: smit_SMT_1068_SMT_1069|ATP-dependent DNA helicase RecG:acetyl xylan esterase, putative|POSITIVE:POSITIVE|[1009047,1009469]|423 HSP 1 e-value: 6.0E-46 bit: 186.0 Len: 110 Query Start:149 Query End:258 Subject Strand: NEGATIVE Subject Start: 19 Subject End: 128 ....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: smit_SMT_1487_SMT_1488|hypothetical protein:K06147 ATP-binding cassette, subfamily B, bacterial|POSITIVE:POSITIVE|[1467137,1467296]|160 HSP 1 e-value: 9.0E-45 bit: 182.0 Len: 104 Query Start:153 Query End:256 Subject Strand: POSITIVE Subject Start: 19 Subject End: 122 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................tactcttcgaaaatcaaattcaaactgcgtcaacgtcgccttgccgtactcgagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... Subject: smit_SMT_2133_SMT_2134|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[2014098,2014211]|114 HSP 1 e-value: 4.0E-44 bit: 180.0 Len: 103 Query Start:150 Query End:252 Subject Strand: POSITIVE Subject Start: 12 Subject End: 114 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattga....................................................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattga....................................................................................................................................................................................................................................................................................................................................................... Subject: smit_SMT_872_SMT_873|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[820709,820822]|114 HSP 1 e-value: 4.0E-44 bit: 180.0 Len: 103 Query Start:150 Query End:252 Subject Strand: POSITIVE Subject Start: 12 Subject End: 114 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattga....................................................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattga....................................................................................................................................................................................................................................................................................................................................................... Subject: smit_SMT_384_SMT_385|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[319921,320034]|114 HSP 1 e-value: 4.0E-44 bit: 180.0 Len: 103 Query Start:150 Query End:252 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 103 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattga....................................................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattga....................................................................................................................................................................................................................................................................................................................................................... Subject: smit_SMT_833_SMT_834|hypothetical protein predicted by Glimmer/Critica:hypothetical protein|NEGATIVE:NEGATIVE|[775453,775606]|154 HSP 1 e-value: 1.0E-43 bit: 178.0 Len: 106 Query Start:153 Query End:258 Subject Strand: NEGATIVE Subject Start: 50 Subject End: 154 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................tactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: smit_SMT_1670_SMT_1671|K02030 polar amino acid transport system substrate-binding protein:hypothetical protein|POSITIVE:NEGATIVE|[1659356,1659481]|126 HSP 1 e-value: 2.0E-42 bit: 174.0 Len: 104 Query Start:152 Query End:255 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 104 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagta.................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagtttgctctttgattttcattgagta.................................................................................................................................................................................................................................................................................................................................................... Subject: smit_SMT_826_SMT_827|hypothetical protein:hypothetical protein|NEGATIVE:POSITIVE|[750113,750528]|416 HSP 1 e-value: 2.0E-42 bit: 174.0 Len: 108 Query Start:151 Query End:258 Subject Strand: POSITIVE Subject Start: 104 Subject End: 211 ......................................................................................................................................................aatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ......................................................................................................................................................aatactcttcgaaaatcaaattcaaaccacgtcagcttcgccttgccgtactccagtacaacctgcggctagcttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: smit_SMT_2108_SMT_2109|adenylosuccinate lyase:hypothetical protein predicted by Glimmer/Critica|NEGATIVE:NEGATIVE|[1998942,1999150]|209 HSP 1 e-value: 4.0E-41 bit: 170.0 Len: 106 Query Start:153 Query End:258 Subject Strand: NEGATIVE Subject Start: 104 Subject End: 209 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcagcttcgccttgccgtactcaagtacagcctgtggctagctttctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: smit_SMT_1766_SMT_1767|sucrose-6-phosphate hydrolase:oxidoreductase, short chain dehydrogenase/reductase family|POSITIVE:NEGATIVE|[1743162,1743332]|171 HSP 1 e-value: 4.0E-41 bit: 170.0 Len: 110 Query Start:149 Query End:258 Subject Strand: POSITIVE Subject Start: 4 Subject End: 113 ....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcagcgtcgcctcaccgtactcaagtacagcttgcgactagcttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: smit_SMT_1179_SMT_1180|aldose 1-epimerase:putative tagatose-6-phosphate aldose/ketose isomerase|NEGATIVE:NEGATIVE|[1137945,1138125]|181 HSP 1 e-value: 4.0E-41 bit: 170.0 Len: 106 Query Start:153 Query End:258 Subject Strand: NEGATIVE Subject Start: 76 Subject End: 181 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcagcttcgccttgccgtactcaagtacagcctgtggctagctttctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: smit_SMT_890_SMT_891|K02029 polar amino acid transport system permease protein:oxidoreductase, putative|POSITIVE:POSITIVE|[837753,837989]|237 HSP 1 e-value: 4.0E-41 bit: 170.0 Len: 106 Query Start:153 Query End:258 Subject Strand: POSITIVE Subject Start: 1 Subject End: 106 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcagcttcaccttgccgtactcaagtacagcctgcgtctagcttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: smit_SMT_1781_SMT_1782|transcriptional regulator, xre family:hypothetical protein|POSITIVE:POSITIVE|[1759357,1759659]|303 HSP 1 e-value: 3.0E-38 bit: 161.0 Len: 105 Query Start:152 Query End:256 Subject Strand: POSITIVE Subject Start: 176 Subject End: 280 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatcaaattcaaactacgtcagcttcaccttgccgtactcaagtacagccttcggctagcttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... Subject: smit_SMT_442_SMT_443|transcriptional regulator, putative:hydroxyethylthiazole kinase|POSITIVE:POSITIVE|[382461,382694]|234 HSP 1 e-value: 3.0E-38 bit: 161.0 Len: 109 Query Start:150 Query End:258 Subject Strand: POSITIVE Subject Start: 34 Subject End: 142 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................taattctcttcgaaaatcaaattcaaaccacgtcagcttcaccttgccgtactcaagtacagcctacggctagcttcctagtttgctctttgattttcattgagcataa................................................................................................................................................................................................................................................................................................................................................. Subject: smit_SMT_798_SMT_799|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[707167,707385]|219 HSP 1 e-value: 8.0E-36 bit: 153.0 Len: 109 Query Start:150 Query End:258 Subject Strand: NEGATIVE Subject Start: 112 Subject End: 219 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................taatactcttcgaaaatctc-ttcaaaccacgtcagcttcaccttgccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: smit_SMT_1476_SMT_1477|thiol peroxidase:K02077 zinc/manganese transport system substrate-binding protein|NEGATIVE:NEGATIVE|[1459310,1459536]|227 HSP 1 e-value: 5.0E-34 bit: 147.0 Len: 106 Query Start:153 Query End:258 Subject Strand: NEGATIVE Subject Start: 123 Subject End: 227 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................tactcttcgaaaatctc-ttcaaaccacgtcagcgttgccttgccgtactcaagtacagcctgtggctagcttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: smit_SMT_915_SMT_916|sucrose operon repressor:3-hydroxy-3-methylglutaryl-CoA reductase|POSITIVE:NEGATIVE|[868680,868819]|140 HSP 1 e-value: 1.0E-31 bit: 139.0 Len: 106 Query Start:153 Query End:258 Subject Strand: POSITIVE Subject Start: 1 Subject End: 105 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagttcgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: smit_SMT_1535_SMT_1536|exodeoxyribonuclease V alpha chain:trigger factor|POSITIVE:NEGATIVE|[1520574,1520725]|152 HSP 1 e-value: 5.0E-31 bit: 137.0 Len: 105 Query Start:152 Query End:256 Subject Strand: NEGATIVE Subject Start: 45 Subject End: 148 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgtggctagcttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... Subject: smit_SMT_1849_SMT_1850|hypothetical protein:K01421 putative membrane protein|POSITIVE:POSITIVE|[1813865,1815201]|1337 HSP 1 e-value: 3.0E-26 bit: 121.0 Len: 105 Query Start:152 Query End:256 Subject Strand: NEGATIVE Subject Start: 257 Subject End: 360 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcagcttcgccttgccgtactcaagtactgactacggctagcttcctagtttgatctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... Subject: smit_SMT_1689_SMT_1690|PTS enzyme, maltose-and glucose-specific, factor II homologue:K06148 ATP-binding cassette, subfamily C, bacterial|POSITIVE:NEGATIVE|[1673200,1673459]|260 HSP 1 e-value: 7.0E-21 bit: 103.0 Len: 104 Query Start:152 Query End:255 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 103 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagta.................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccatgccagcttcgccttggcgtactcaagtatagcctgcgcctagcttcccagtttgctctttgattttcattgagta.................................................................................................................................................................................................................................................................................................................................................... Subject: smit_SMT_1200_SMT_1201|K06148 ATP-binding cassette, subfamily C, bacterial:hypothetical protein predicted by Glimmer/Critica|NEGATIVE:NEGATIVE|[1163326,1163854]|529 HSP 1 e-value: 4.0E-19 bit: 97.6 Len: 49 Query Start:152 Query End:200 Subject Strand: NEGATIVE Subject Start: 116 Subject End: 164 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-16 bit: 87.7 Len: 48 Query Start:209 Query End:256 Subject Strand: NEGATIVE Subject Start: 14 Subject End: 61 ................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................cagcctgcggctagttttctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... Subject: smit_SMT_1544_SMT_1545|mevalonate kinase:choline-binding protein|NEGATIVE:NEGATIVE|[1528975,1529249]|275 HSP 1 e-value: 2.0E-15 bit: 85.7 Len: 51 Query Start:150 Query End:200 Subject Strand: NEGATIVE Subject Start: 136 Subject End: 186 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgta........................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-7 bit: 58.0 Len: 45 Query Start:212 Query End:256 Subject Strand: NEGATIVE Subject Start: 33 Subject End: 77 ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................cctgcgggtagcttcatagtttgctttttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... Subject: smit_SMT_495_SMT_496|bacterial peptide chain release factor 2 (RF-2):superoxide dismutase, manganese-dependent|POSITIVE:POSITIVE|[430114, 430572]|459 HSP 1 e-value: 2.0E-15 bit: 85.7 Len: 43 Query Start:216 Query End:258 Subject Strand: NEGATIVE Subject Start: 157 Subject End: 199 .......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. .......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-8 bit: 61.9 Len: 51 Query Start:150 Query End:200 Subject Strand: NEGATIVE Subject Start: 307 Subject End: 356 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................taatactcttcgaaaatctc-ttcaaaccgcgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: smit_SMT_1569_SMT_1570|dihydroxy-acid dehydratase:hypothetical protein|POSITIVE:NEGATIVE|[1563129,1563339]|211 HSP 1 e-value: 3.0E-14 bit: 81.8 Len: 45 Query Start:212 Query End:256 Subject Strand: POSITIVE Subject Start: 110 Subject End: 154 ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgttctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-9 bit: 65.9 Len: 49 Query Start:152 Query End:200 Subject Strand: POSITIVE Subject Start: 5 Subject End: 52 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: smit_SMT_1554_SMT_1555|isoleucyl-tRNA synthetase:hypothetical protein|POSITIVE:NEGATIVE|[1539973,1540312]|340 HSP 1 e-value: 2.0E-12 bit: 75.8 Len: 110 Query Start:149 Query End:258 Subject Strand: POSITIVE Subject Start: 146 Subject End: 254 ....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................ttaatacttttcgaaaatctc-ttcaaactacgtcaatgtcgcctcactgtacttcagcacagcttgcgactagcttcctagtttgctttttgattttcatttagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: smit_SMT_912_SMT_913|fructokinase:putative sucrose-specific PTS permease, enzyme II|NEGATIVE:NEGATIVE|[863711,864012]|302 HSP 1 e-value: 6.0E-12 bit: 73.8 Len: 45 Query Start:216 Query End:260 Subject Strand: NEGATIVE Subject Start: 147 Subject End: 191 .......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgattttcattgagtataata............................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................cggctagcttcctagtttgctctttgattttcattgagtacaata............................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-11 bit: 71.9 Len: 48 Query Start:153 Query End:200 Subject Strand: NEGATIVE Subject Start: 255 Subject End: 302 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccatgtcagcttcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: smit_SMT_217_SMT_218|hypothetical protein:undecaprenyl pyrophosphate synthetase|POSITIVE:POSITIVE|[149949,150294]|346 HSP 1 e-value: 6.0E-12 bit: 73.8 Len: 45 Query Start:212 Query End:256 Subject Strand: NEGATIVE Subject Start: 158 Subject End: 202 ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................cctgcggctagcttcctagtttggtctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-9 bit: 65.9 Len: 33 Query Start:152 Query End:184 Subject Strand: NEGATIVE Subject Start: 239 Subject End: 271 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtca........................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtca........................................................................................................................................................................................................................................................................................................................................................................................................................... Inter-species Hit: Count: 65 Min: 20 Max: 464 Len: 445 Subject: NC_008533_SPD_1034_SPD_1035|hydrolase, haloacid dehalogenase-like family protein:hypothetical protein|NEGATIVE:NEGATIVE|[1060510,1060966]|457 HSP 1 e-value: 7.0E-58 bit: 226.0 Len: 202 Query Start:263 Query End:464 Subject Strand: NEGATIVE Subject Start: 100 Subject End: 301 ......................................................................................................................................................................................................................................................................tcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtatag................................................................................................................................... ......................................................................................................................................................................................................................................................................tcaaaactgattgtgatggggctattctagctttagaaaccttcaaaaattaaaatttaaggcaatcaattacttggaagagtatgaaagcatttagtttataggaattctaggtctagaattacacatatatttatgaatacggggtgctcgatagttagtattgttctattctgaaagatttgagctgtcagttgtatag................................................................................................................................... HSP 2 e-value: 9.0E-39 bit: 163.0 Len: 130 Query Start:20 Query End:149 Subject Strand: NEGATIVE Subject Start: 309 Subject End: 438 ...................ttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgt.............................................................................................................................................................................................................................................................................................................................................................................................................................................................. ...................ttttataggtaagctattgattatctcaactataaaatgttaagtaaatgatttcaaaatcagaaagggattgctttatgcagttcctttttattttaacaggagtgaaactatagtgtttctaaattgt.............................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: NC_003098_spr1057_spr1058|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1052979,1053435]|457 HSP 1 e-value: 7.0E-58 bit: 226.0 Len: 202 Query Start:263 Query End:464 Subject Strand: NEGATIVE Subject Start: 100 Subject End: 301 ......................................................................................................................................................................................................................................................................tcaaaactgattgtgatgggactattctagctttagaatccttcaaaaattaaaatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatatttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtatag................................................................................................................................... ......................................................................................................................................................................................................................................................................tcaaaactgattgtgatggggctattctagctttagaaaccttcaaaaattaaaatttaaggcaatcaattacttggaagagtatgaaagcatttagtttataggaattctaggtctagaattacacatatatttatgaatacggggtgctcgatagttagtattgttctattctgaaagatttgagctgtcagttgtatag................................................................................................................................... HSP 2 e-value: 9.0E-39 bit: 163.0 Len: 130 Query Start:20 Query End:149 Subject Strand: NEGATIVE Subject Start: 309 Subject End: 438 ...................ttttataggtgagttattgattatctcaactatcaaattttaagtaaataatttcaaaatcagaaagggattgctttatgcagttcctttttaatgtaaaaggagtggaatcatagcgtttctaaattgt.............................................................................................................................................................................................................................................................................................................................................................................................................................................................. ...................ttttataggtaagctattgattatctcaactataaaatgttaagtaaatgatttcaaaatcagaaagggattgctttatgcagttcctttttattttaacaggagtgaaactatagtgtttctaaattgt.............................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: NC_003028_SP_0280_SP_0281|ribosomal small subunit pseudouridine synthase A:aminopeptidase C|POSITIVE:POSITIVE|[258312,258528]|217 HSP 1 e-value: 2.0E-52 bit: 208.0 Len: 105 Query Start:152 Query End:256 Subject Strand: NEGATIVE Subject Start: 10 Subject End: 114 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... Subject: NC_008533_SPD_1551_SPD_1552|prevent-host-death family protein:hypothetical protein|NEGATIVE:NEGATIVE|[1574500,1574730]|231 HSP 1 e-value: 4.0E-50 bit: 200.0 Len: 109 Query Start:150 Query End:258 Subject Strand: NEGATIVE Subject Start: 85 Subject End: 193 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................taatactcttcgaaaatcaaattcaaatcgcgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: NC_008533_SPD_0546_SPD_0547|branched-chain amino acid transport system II carrier protein:hypothetical protein|POSITIVE:POSITIVE|[559539,559741]|203 HSP 1 e-value: 4.0E-50 bit: 200.0 Len: 109 Query Start:150 Query End:258 Subject Strand: POSITIVE Subject Start: 5 Subject End: 113 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccgcgtcaacgtcgccttgtcgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: NC_003098_spr1586_spr1587|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1567002,1567199]|198 HSP 1 e-value: 4.0E-50 bit: 200.0 Len: 109 Query Start:150 Query End:258 Subject Strand: NEGATIVE Subject Start: 52 Subject End: 160 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................taatactcttcgaaaatcaaattcaaatcgcgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: NC_003098_spr0551_spr0552|Branched-chain amino acid transport system carrier protein:hypothetical protein|POSITIVE:POSITIVE|[552009,552211]|203 HSP 1 e-value: 4.0E-50 bit: 200.0 Len: 109 Query Start:150 Query End:258 Subject Strand: POSITIVE Subject Start: 5 Subject End: 113 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccgcgtcaacgtcgccttgtcgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: NC_003028_SP_1741_SP_1742|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1645558,1645794]|237 HSP 1 e-value: 4.0E-50 bit: 200.0 Len: 109 Query Start:150 Query End:258 Subject Strand: NEGATIVE Subject Start: 91 Subject End: 199 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................taatactcttcgaaaatcaaattcaaatcgcgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: NC_003028_SP_1180_SP_1181|ribonucleotide-diphosphate reductase beta subunit:hypothetical protein|POSITIVE:NEGATIVE|[1119540,1119753]|214 HSP 1 e-value: 2.0E-46 bit: 188.0 Len: 107 Query Start:153 Query End:259 Subject Strand: POSITIVE Subject Start: 1 Subject End: 107 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataat................................................................................................................................................................................................................................................................................................................................................ ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcagcttcgccttgccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtataat................................................................................................................................................................................................................................................................................................................................................ Subject: NC_008533_SPD_0260_SPD_0261|ribosomal small subunit pseudouridine synthase A:aminopeptidase C|POSITIVE:POSITIVE|[258814,259029]|216 HSP 1 e-value: 6.0E-43 bit: 176.0 Len: 105 Query Start:152 Query End:256 Subject Strand: NEGATIVE Subject Start: 10 Subject End: 113 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003028_SP_2183_SP_2184|hypothetical protein:glycerol uptake facilitator protein|NEGATIVE:NEGATIVE|[2101749,2102044]|296 HSP 1 e-value: 6.0E-43 bit: 176.0 Len: 105 Query Start:152 Query End:256 Subject Strand: NEGATIVE Subject Start: 189 Subject End: 293 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003028_SP_1472_SP_1473|oxidoreductase, putative:hypothetical protein|POSITIVE:NEGATIVE|[1386055,1386276]|222 HSP 1 e-value: 2.0E-42 bit: 174.0 Len: 108 Query Start:150 Query End:257 Subject Strand: NEGATIVE Subject Start: 115 Subject End: 222 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtata.................................................................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcagcttcaccttgccgtacttaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtata.................................................................................................................................................................................................................................................................................................................................................. Subject: NC_003028_SP_0816_SP_0817|hypothetical protein:MutT/nudix family protein|NEGATIVE:NEGATIVE|[768501,768664]|164 HSP 1 e-value: 4.0E-41 bit: 170.0 Len: 106 Query Start:153 Query End:258 Subject Strand: NEGATIVE Subject Start: 59 Subject End: 164 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................tactcttcgaaaataaaattcaaaccacgtcagcgtcgccttaccgtactcaagtatagcctgcggctagcttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: NC_003028_SP_0096_SP_0097|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[98992,99168]|177 HSP 1 e-value: 6.0E-40 bit: 167.0 Len: 104 Query Start:152 Query End:255 Subject Strand: NEGATIVE Subject Start: 69 Subject End: 172 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagta.................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcaaaaatcaaattcaaaccacgtcagcttcgccttaccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagta.................................................................................................................................................................................................................................................................................................................................................... Subject: NC_008533_SPD_0714_SPD_0715|hypothetical protein:MutT/nudix family protein|NEGATIVE:NEGATIVE|[729726,729889]|164 HSP 1 e-value: 2.0E-36 bit: 155.0 Len: 106 Query Start:153 Query End:258 Subject Strand: NEGATIVE Subject Start: 59 Subject End: 164 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................tactcttcgaaaataaaattcaaatcacgtaagcgtcgccttaccgtactcaagtatagcctgcggctagcttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: NC_003098_spr0720_spr0721|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[722195,722358]|164 HSP 1 e-value: 2.0E-36 bit: 155.0 Len: 106 Query Start:153 Query End:258 Subject Strand: NEGATIVE Subject Start: 59 Subject End: 164 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................tactcttcgaaaataaaattcaaatcacgtaagcgtcgccttaccgtactcaagtatagcctgcggctagcttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: NC_008533_SPD_0991_SPD_0992|ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[1002301,1002645]|345 HSP 1 e-value: 8.0E-36 bit: 153.0 Len: 105 Query Start:152 Query End:256 Subject Strand: POSITIVE Subject Start: 145 Subject End: 249 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaatttcaccttgccgtactcaagtacagcctgcggctaacttcctagtttgcactttaattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003098_spr1014_spr1015|50S ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[994770,995114]|345 HSP 1 e-value: 8.0E-36 bit: 153.0 Len: 105 Query Start:152 Query End:256 Subject Strand: POSITIVE Subject Start: 145 Subject End: 249 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaatttcaccttgccgtactcaagtacagcctgcggctaacttcctagtttgcactttaattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003028_SP_1107_SP_1108|50S ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[1038201,1038545]|345 HSP 1 e-value: 2.0E-33 bit: 145.0 Len: 105 Query Start:152 Query End:256 Subject Strand: POSITIVE Subject Start: 145 Subject End: 249 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccatgtcaatttcaccttgccgtactcaagtacagcctgcggctaacttcctagtttgcactttaattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003028_SP_1171_SP_1172|hydrolase, haloacid dehalogenase-like family:hypothetical protein|NEGATIVE:NEGATIVE|[1107003,1107252]|250 HSP 1 e-value: 8.0E-33 bit: 143.0 Len: 149 Query Start:316 Query End:464 Subject Strand: NEGATIVE Subject Start: 100 Subject End: 250 ...........................................................................................................................................................................................................................................................................................................................aatttaaggcaatcaatgttttagaagagtgcgaaaacatttagtttataggaattctagatctagaattgcatagatat--ttatgaagttagagtattcgatagttaggattgttctattctgaaagatttgagctgtcaattgtatag................................................................................................................................... ...........................................................................................................................................................................................................................................................................................................................aatttaaggcaatcaattacttggaagagtatgaaagcatttagtttataggaattctaggtctagaattacatatatatatttatgaagacggggtgttcgatagttagtattgttctattctgaaagatttgagctgtcagttgtatag................................................................................................................................... Subject: NC_003028_SP_0292_SP_0293|bifunctional folate synthesis protein:hypothetical protein|POSITIVE:NEGATIVE|[271230,271378]|149 HSP 1 e-value: 8.0E-33 bit: 143.0 Len: 104 Query Start:152 Query End:255 Subject Strand: POSITIVE Subject Start: 47 Subject End: 149 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagta.................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgtactcaagtacagcttgcggctagcttcctagtttgctctttgattttcattgagta.................................................................................................................................................................................................................................................................................................................................................... Subject: NC_008533_SPD_1158_SPD_1159|NADP-specific glutamate dehydrogenase:hypothetical protein|POSITIVE:NEGATIVE|[1188350,1188844]|495 HSP 1 e-value: 3.0E-29 bit: 131.0 Len: 110 Query Start:149 Query End:258 Subject Strand: NEGATIVE Subject Start: 208 Subject End: 316 ....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................ttaatactctttgaaaatctc-ttcaaaccacgtcagctttgccttgccgtactcaagtacagcctgcgactcgcttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: NC_003098_spr1181_spr1182|glutamate dehydrogenase:hypothetical protein|POSITIVE:NEGATIVE|[1180819,1181313]|495 HSP 1 e-value: 3.0E-29 bit: 131.0 Len: 110 Query Start:149 Query End:258 Subject Strand: NEGATIVE Subject Start: 208 Subject End: 316 ....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................ttaatactctttgaaaatctc-ttcaaaccacgtcagctttgccttgccgtactcaagtacagcctgcgactcgcttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: NC_003028_SP_1306_SP_1307|glutamate dehydrogenase:hypothetical protein|POSITIVE:NEGATIVE|[1233949,1234453]|505 HSP 1 e-value: 7.0E-27 bit: 123.0 Len: 110 Query Start:149 Query End:258 Subject Strand: NEGATIVE Subject Start: 218 Subject End: 326 ....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................ttaatactctttgaaaatctc-ttcaaaccacgtcagctttgctttaccgtactcaagtacagcctgcggctcgcttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: NC_008533_SPD_0710_SPD_0711|septation ring formation regulator EzrA:hypothetical protein|POSITIVE:POSITIVE|[727105,727897]|793 HSP 1 e-value: 7.0E-24 bit: 113.0 Len: 105 Query Start:152 Query End:256 Subject Strand: POSITIVE Subject Start: 135 Subject End: 238 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatctc-ttcaaatcacgtcagcgtcgccttaccgtactcaagtacagcctgaggctagcttcttagtttgctttttgattttcatttagtat................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003028_SP_0807_SP_0809|septation ring formation regulator EzrA:hypothetical protein|POSITIVE:POSITIVE|[764244,764778]|535 HSP 1 e-value: 7.0E-24 bit: 113.0 Len: 105 Query Start:152 Query End:256 Subject Strand: POSITIVE Subject Start: 135 Subject End: 238 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatctt-ttcaaatcacgtcagcgtcgccttaccgtactcaagtacagcctgaggctagcttcttagtttgctttttgattttcatttagtat................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003028_SP_0041_SP_0042|bacteriocin BlpU:competence factor transporting ATP-binding/permease protein ComA|POSITIVE:POSITIVE|[40102,40815]|714 HSP 1 e-value: 2.0E-21 bit: 105.0 Len: 53 Query Start:148 Query End:200 Subject Strand: POSITIVE Subject Start: 541 Subject End: 593 ...................................................................................................................................................gttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................gttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-16 bit: 87.7 Len: 48 Query Start:209 Query End:256 Subject Strand: POSITIVE Subject Start: 648 Subject End: 695 ................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................cagcctacggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... Subject: NC_008533_SPD_0089_SPD_0090|ABC transporter, permease protein:ABC transporter, substrate-binding protein|POSITIVE:POSITIVE|[89674,89930]|257 HSP 1 e-value: 4.0E-19 bit: 97.6 Len: 53 Query Start:148 Query End:200 Subject Strand: POSITIVE Subject Start: 50 Subject End: 102 ...................................................................................................................................................gttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................gttaatactcttcgaaaatcaaattcaaaccgcgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 3.0E-17 bit: 91.7 Len: 50 Query Start:209 Query End:258 Subject Strand: POSITIVE Subject Start: 159 Subject End: 208 ................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................cagcctgcggctagttttctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: NC_008533_SPD_0047_SPD_0049|hypothetical protein:competence factor transporting ATP-binding/permease protein ComA|POSITIVE:POSITIVE|[39873,41901]|2029 HSP 1 e-value: 4.0E-19 bit: 97.6 Len: 49 Query Start:152 Query End:200 Subject Strand: POSITIVE Subject Start: 1860 Subject End: 1908 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-18 bit: 95.6 Len: 48 Query Start:209 Query End:256 Subject Strand: POSITIVE Subject Start: 1963 Subject End: 2010 ................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003028_SP_0091_SP_0092|ABC transporter, permease protein:ABC transporter, substrate-binding protein|POSITIVE:POSITIVE|[94866,95122]|257 HSP 1 e-value: 4.0E-19 bit: 97.6 Len: 53 Query Start:148 Query End:200 Subject Strand: POSITIVE Subject Start: 50 Subject End: 102 ...................................................................................................................................................gttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................gttaatactcttcgaaaatcaaattcaaaccgcgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-15 bit: 83.8 Len: 50 Query Start:209 Query End:258 Subject Strand: POSITIVE Subject Start: 159 Subject End: 208 ................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................cagcctgcggctagttttctagtttgctctttgatttttattgagtataa................................................................................................................................................................................................................................................................................................................................................. Subject: NC_003098_spr1638_spr1639|hypothetical protein:Catabolite control protein|NEGATIVE:NEGATIVE|[1611092,1611987]|896 HSP 1 e-value: 2.0E-18 bit: 95.6 Len: 48 Query Start:209 Query End:256 Subject Strand: POSITIVE Subject Start: 249 Subject End: 296 ................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-7 bit: 58.0 Len: 49 Query Start:152 Query End:200 Subject Strand: POSITIVE Subject Start: 101 Subject End: 148 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccgcgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003028_SP_1840_SP_1841|ABC transporter, ATP-binding/permease protein:hypothetical protein|NEGATIVE:NEGATIVE|[1751943,1752147]|205 HSP 1 e-value: 2.0E-18 bit: 95.6 Len: 48 Query Start:209 Query End:256 Subject Strand: NEGATIVE Subject Start: 39 Subject End: 86 ................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-6 bit: 56.0 Len: 48 Query Start:153 Query End:200 Subject Strand: NEGATIVE Subject Start: 141 Subject End: 187 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................tactcttcgaaaatctc-ttcaaaccgcgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_008533_SPD_0729_SPD_0730|hemolysin-related protein:purine nucleoside phosphorylase|POSITIVE:POSITIVE|[743379,744035]|657 HSP 1 e-value: 1.0E-16 bit: 89.7 Len: 45 Query Start:212 Query End:256 Subject Strand: NEGATIVE Subject Start: 99 Subject End: 143 ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-7 bit: 58.0 Len: 49 Query Start:147 Query End:195 Subject Strand: NEGATIVE Subject Start: 206 Subject End: 253 ..................................................................................................................................................tgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttg................................................................................................................................................................................................................................................................................................................................................................................................................ ..................................................................................................................................................tgtttatactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttg................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: NC_003098_spr1924_spr1925|aspartyl-tRNA synthetase:hypothetical protein|NEGATIVE:NEGATIVE|[1908629,1908979]|351 HSP 1 e-value: 1.0E-16 bit: 89.7 Len: 49 Query Start:212 Query End:260 Subject Strand: POSITIVE Subject Start: 273 Subject End: 321 ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtataata............................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................cctgcggctagcttcctagtttgctctttgattttcattgagtataata............................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-6 bit: 54.0 Len: 51 Query Start:150 Query End:200 Subject Strand: POSITIVE Subject Start: 120 Subject End: 169 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................taatactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003098_spr0737_spr0738|Conserved hypothetical protein, truncation:Purine nucleoside phosphorylase (inosine phosphorylase)|POSITIVE:POSITIVE|[735848,736504]|657 HSP 1 e-value: 1.0E-16 bit: 89.7 Len: 45 Query Start:212 Query End:256 Subject Strand: NEGATIVE Subject Start: 99 Subject End: 143 ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-7 bit: 58.0 Len: 49 Query Start:147 Query End:195 Subject Strand: NEGATIVE Subject Start: 206 Subject End: 253 ..................................................................................................................................................tgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttg................................................................................................................................................................................................................................................................................................................................................................................................................ ..................................................................................................................................................tgtttatactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttg................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: NC_003028_SP_2114_SP_2115|aspartyl-tRNA synthetase:hypothetical protein|NEGATIVE:NEGATIVE|[2029292,2029642]|351 HSP 1 e-value: 1.0E-16 bit: 89.7 Len: 49 Query Start:212 Query End:260 Subject Strand: POSITIVE Subject Start: 273 Subject End: 321 ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtataata............................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................cctgcggctagcttcctagtttgctctttgattttcattgagtataata............................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-6 bit: 54.0 Len: 51 Query Start:150 Query End:200 Subject Strand: POSITIVE Subject Start: 120 Subject End: 169 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................taatactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_008533_SPD_0556_SPD_0558|hypothetical protein:cell wall-associated serine protease PrtA|POSITIVE:POSITIVE|[568719,569947]|1229 HSP 1 e-value: 4.0E-16 bit: 87.7 Len: 44 Query Start:212 Query End:255 Subject Strand: POSITIVE Subject Start: 961 Subject End: 1004 ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagta.................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagta.................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-9 bit: 63.9 Len: 48 Query Start:152 Query End:199 Subject Strand: POSITIVE Subject Start: 810 Subject End: 856 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................ .......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................ Subject: NC_003098_spr0560_spr0561|hypothetical protein:Cell wall-associated serine proteinase precursor PrtA|POSITIVE:POSITIVE|[561687,562417]|731 HSP 1 e-value: 4.0E-16 bit: 87.7 Len: 44 Query Start:212 Query End:255 Subject Strand: POSITIVE Subject Start: 463 Subject End: 506 ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagta.................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagta.................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-9 bit: 63.9 Len: 48 Query Start:152 Query End:199 Subject Strand: POSITIVE Subject Start: 312 Subject End: 358 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................ .......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................ Subject: NC_003028_SP_1706_SP_1707|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1611668,1611851]|184 HSP 1 e-value: 2.0E-15 bit: 85.7 Len: 43 Query Start:214 Query End:256 Subject Strand: NEGATIVE Subject Start: 32 Subject End: 74 .....................................................................................................................................................................................................................tgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................tgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-6 bit: 56.0 Len: 44 Query Start:152 Query End:195 Subject Strand: NEGATIVE Subject Start: 139 Subject End: 181 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttg................................................................................................................................................................................................................................................................................................................................................................................................................ .......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttg................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: NC_003028_SP_0640_SP_0641|hypothetical protein:serine protease, subtilase family|POSITIVE:POSITIVE|[603164,603894]|731 HSP 1 e-value: 2.0E-15 bit: 85.7 Len: 43 Query Start:213 Query End:255 Subject Strand: POSITIVE Subject Start: 464 Subject End: 506 ....................................................................................................................................................................................................................ctgcggctagtttcctagtttgctctttgattttcattgagta.................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................ctgcggctagtttcctagtttgctctttgattttcattgagta.................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-9 bit: 63.9 Len: 48 Query Start:152 Query End:199 Subject Strand: POSITIVE Subject Start: 312 Subject End: 358 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................ .......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................ Subject: NC_003028_SP_0631_SP_0633|50S ribosomal protein L1:hypothetical protein|POSITIVE:POSITIVE|[598117,598657]|541 HSP 1 e-value: 2.0E-15 bit: 85.7 Len: 47 Query Start:212 Query End:258 Subject Strand: POSITIVE Subject Start: 491 Subject End: 537 ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttggttttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 4.0E-10 bit: 67.9 Len: 50 Query Start:150 Query End:199 Subject Strand: POSITIVE Subject Start: 338 Subject End: 386 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................ .....................................................................................................................................................taatactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................ Subject: NC_008533_SPD_1432_SPD_1433|UDP-glucose 4-epimerase:FAD dependent oxidoreductase|NEGATIVE:NEGATIVE|[1449278,1449577]|300 HSP 1 e-value: 6.0E-15 bit: 83.8 Len: 46 Query Start:152 Query End:197 Subject Strand: POSITIVE Subject Start: 105 Subject End: 150 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgcc.............................................................................................................................................................................................................................................................................................................................................................................................................. .......................................................................................................................................................atactcttcgaaaatccaattcaaaccacgtcaacgtcgccttgcc.............................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-9 bit: 65.9 Len: 41 Query Start:215 Query End:255 Subject Strand: POSITIVE Subject Start: 260 Subject End: 300 ......................................................................................................................................................................................................................gcggctagtttcctagtttgctctttgattttcattgagta.................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................gcggctagttacctagtttgttctttgattttcattgagta.................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003098_spr1460_spr1461|UDP-glucose 4-epimerase:hypothetical protein|NEGATIVE:NEGATIVE|[1441747,1442046]|300 HSP 1 e-value: 6.0E-15 bit: 83.8 Len: 46 Query Start:152 Query End:197 Subject Strand: POSITIVE Subject Start: 105 Subject End: 150 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgcc.............................................................................................................................................................................................................................................................................................................................................................................................................. .......................................................................................................................................................atactcttcgaaaatccaattcaaaccacgtcaacgtcgccttgcc.............................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-9 bit: 65.9 Len: 41 Query Start:215 Query End:255 Subject Strand: POSITIVE Subject Start: 260 Subject End: 300 ......................................................................................................................................................................................................................gcggctagtttcctagtttgctctttgattttcattgagta.................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................gcggctagttacctagtttgttctttgattttcattgagta.................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003028_SP_0493_SP_0494|DNA-directed RNA polymerase subunit delta:CTP synthetase|POSITIVE:POSITIVE|[470342,470730]|389 HSP 1 e-value: 6.0E-15 bit: 83.8 Len: 50 Query Start:209 Query End:258 Subject Strand: NEGATIVE Subject Start: 127 Subject End: 176 ................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................cagcctacggctagtttcctagcttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-8 bit: 61.9 Len: 51 Query Start:150 Query End:200 Subject Strand: NEGATIVE Subject Start: 233 Subject End: 282 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................taatactcttcgaaaatctc-ttcaaaccgcgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003028_SP_0033_SP_0034|hypothetical protein:membrane protein|POSITIVE:NEGATIVE|[34691,35008]|318 HSP 1 e-value: 6.0E-15 bit: 83.8 Len: 42 Query Start:217 Query End:258 Subject Strand: NEGATIVE Subject Start: 32 Subject End: 73 ........................................................................................................................................................................................................................ggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................................................................................ggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 6.0E-9 bit: 63.9 Len: 48 Query Start:153 Query End:200 Subject Strand: NEGATIVE Subject Start: 272 Subject End: 318 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................tactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_008533_SPD_1492_SPD_1493|hypothetical protein:sugar ABC transporter, permease protein|NEGATIVE:NEGATIVE|[1508518,1508789]|272 HSP 1 e-value: 3.0E-14 bit: 81.8 Len: 105 Query Start:153 Query End:257 Subject Strand: NEGATIVE Subject Start: 168 Subject End: 272 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtata.................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................tactctgcgaaaatcgaatgcaaactacgtcagcttcaccttgccatacttaagtattgcctgcggttagcttcctagtttgttcttcaattttcattgagtata.................................................................................................................................................................................................................................................................................................................................................. Subject: NC_003098_spr1524_spr1525|hypothetical protein:ABC transporter membrane-spanning permease - sugar transport|NEGATIVE:NEGATIVE|[1500987,1501258]|272 HSP 1 e-value: 3.0E-14 bit: 81.8 Len: 105 Query Start:153 Query End:257 Subject Strand: NEGATIVE Subject Start: 168 Subject End: 272 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtactcaagtacagcctgcggctagtttcctagtttgctctttgattttcattgagtata.................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................tactctgcgaaaatcgaatgcaaactacgtcagcttcaccttgccatacttaagtattgcctgcggttagcttcctagtttgttcttcaattttcattgagtata.................................................................................................................................................................................................................................................................................................................................................. Subject: NC_003028_SP_1516_SP_1517|acetyltransferase, GNAT family:transcription elongation factor GreA|NEGATIVE:NEGATIVE|[1424331,1424807]|477 HSP 1 e-value: 3.0E-14 bit: 81.8 Len: 45 Query Start:212 Query End:256 Subject Strand: NEGATIVE Subject Start: 91 Subject End: 135 ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgatttttattgagtat................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-6 bit: 56.0 Len: 48 Query Start:153 Query End:200 Subject Strand: NEGATIVE Subject Start: 374 Subject End: 420 ........................................................................................................................................................tactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................tactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003028_SP_0834_SP_0835|hemolysin-related protein:purine nucleoside phosphorylase, family 1|POSITIVE:POSITIVE|[783000,783652]|653 HSP 1 e-value: 3.0E-14 bit: 81.8 Len: 45 Query Start:212 Query End:256 Subject Strand: NEGATIVE Subject Start: 99 Subject End: 143 ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................cctgcggctagtttcttagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-7 bit: 58.0 Len: 49 Query Start:147 Query End:195 Subject Strand: NEGATIVE Subject Start: 206 Subject End: 253 ..................................................................................................................................................tgttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttg................................................................................................................................................................................................................................................................................................................................................................................................................ ..................................................................................................................................................tgtttatactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttg................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: NC_008533_SPD_0099_SPD_0101|capsular polysaccharide biosynthesis protein:hydrolase, haloacid dehalogenase-like family protein|POSITIVE:NEGATIVE|[101068,101462]|395 HSP 1 e-value: 1.0E-13 bit: 79.8 Len: 48 Query Start:209 Query End:256 Subject Strand: POSITIVE Subject Start: 306 Subject End: 353 ................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................cagcccgcagctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-9 bit: 65.9 Len: 49 Query Start:152 Query End:200 Subject Strand: POSITIVE Subject Start: 67 Subject End: 114 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003098_spr0092_spr0093|CapD protein, required for the biosynthesis of type 1 capsular polysaccharide:Phosphoglycolate phosphatase|POSITIVE:NEGATIVE|[101068,101462]|395 HSP 1 e-value: 1.0E-13 bit: 79.8 Len: 48 Query Start:209 Query End:256 Subject Strand: POSITIVE Subject Start: 306 Subject End: 353 ................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................cagcccgcagctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-9 bit: 65.9 Len: 49 Query Start:152 Query End:200 Subject Strand: POSITIVE Subject Start: 67 Subject End: 114 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003098_spr0556_spr0557|50S ribosomal protein L1:ABC transporter ATP-binding protein - role in polysaccharide efflux|POSITIVE:POSITIVE|[556072,558588]|2517 HSP 1 e-value: 4.0E-13 bit: 77.8 Len: 47 Query Start:212 Query End:258 Subject Strand: POSITIVE Subject Start: 1061 Subject End: 1107 ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ...................................................................................................................................................................................................................cctgaggctagtttcctagtttgctctttggttttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 9.0E-8 bit: 60.0 Len: 50 Query Start:150 Query End:199 Subject Strand: POSITIVE Subject Start: 593 Subject End: 641 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................ .....................................................................................................................................................taatactctttgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgt............................................................................................................................................................................................................................................................................................................................................................................................................ Subject: NC_003028_SP_1717_SP_1718|ABC transporter, ATP-binding protein:hypothetical protein|NEGATIVE:NEGATIVE|[1621815,1622204]|390 HSP 1 e-value: 4.0E-13 bit: 77.8 Len: 43 Query Start:216 Query End:258 Subject Strand: NEGATIVE Subject Start: 114 Subject End: 156 .......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. .......................................................................................................................................................................................................................cggctagcttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 6.0E-6 bit: 54.0 Len: 51 Query Start:150 Query End:200 Subject Strand: NEGATIVE Subject Start: 264 Subject End: 313 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................taatactcttcgaaaatctc-ttcaaaccacgtcagcttcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003028_SP_1696_SP_1697|hypothetical protein:ATP-dependent DNA helicase RecG|NEGATIVE:NEGATIVE|[1600719,1600952]|234 HSP 1 e-value: 4.0E-13 bit: 77.8 Len: 47 Query Start:212 Query End:258 Subject Strand: POSITIVE Subject Start: 170 Subject End: 216 ...................................................................................................................................................................................................................cctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ...................................................................................................................................................................................................................cctgcggttagcttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 1.0E-6 bit: 56.0 Len: 52 Query Start:149 Query End:200 Subject Strand: POSITIVE Subject Start: 15 Subject End: 65 ....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................ttaatactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003028_SP_0103_SP_0104|capsular polysaccharide biosynthesis protein, putative:hydrolase, haloacid dehalogenase-like family|POSITIVE:NEGATIVE|[106519,106955]|437 HSP 1 e-value: 4.0E-13 bit: 77.8 Len: 39 Query Start:218 Query End:256 Subject Strand: POSITIVE Subject Start: 357 Subject End: 395 .........................................................................................................................................................................................................................gctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... .........................................................................................................................................................................................................................gctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-9 bit: 65.9 Len: 49 Query Start:152 Query End:200 Subject Strand: POSITIVE Subject Start: 67 Subject End: 114 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_008533_SPD_0569_SPD_0570|sodium/hydrogen exchanger family protein:ribonuclease BN, putative|POSITIVE:POSITIVE|[591916,592093]|178 HSP 1 e-value: 2.0E-12 bit: 75.8 Len: 50 Query Start:209 Query End:258 Subject Strand: POSITIVE Subject Start: 106 Subject End: 155 ................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................cagcttgcggctagctttctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 1.0E-6 bit: 56.0 Len: 52 Query Start:149 Query End:200 Subject Strand: POSITIVE Subject Start: 1 Subject End: 51 ....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................ttaatactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_008533_SPD_0441_SPD_0442|DNA-directed RNA polymerase, delta subunit, putative:CTP synthase|POSITIVE:POSITIVE|[444164,444552]|389 HSP 1 e-value: 2.0E-12 bit: 75.8 Len: 50 Query Start:209 Query End:258 Subject Strand: NEGATIVE Subject Start: 127 Subject End: 176 ................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................cagcctacggctagtttcctagcttgcactttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-8 bit: 61.9 Len: 51 Query Start:150 Query End:200 Subject Strand: NEGATIVE Subject Start: 233 Subject End: 282 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................taatactcttcgaaaatctc-ttcaaaccgcgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003098_spr0573_spr0574|Na+/H+ antiporter:hypothetical protein|POSITIVE:POSITIVE|[584385,584547]|163 HSP 1 e-value: 2.0E-12 bit: 75.8 Len: 50 Query Start:209 Query End:258 Subject Strand: POSITIVE Subject Start: 106 Subject End: 155 ................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................cagcttgcggctagctttctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 1.0E-6 bit: 56.0 Len: 52 Query Start:149 Query End:200 Subject Strand: POSITIVE Subject Start: 1 Subject End: 51 ....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................ttaatactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003098_spr0437_spr0438|DNA-directed RNA polymerase subunit delta:CTP synthetase|POSITIVE:POSITIVE|[436634,437022]|389 HSP 1 e-value: 2.0E-12 bit: 75.8 Len: 50 Query Start:209 Query End:258 Subject Strand: NEGATIVE Subject Start: 127 Subject End: 176 ................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................cagcctacggctagtttcctagcttgcactttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-8 bit: 61.9 Len: 51 Query Start:150 Query End:200 Subject Strand: NEGATIVE Subject Start: 233 Subject End: 282 .....................................................................................................................................................taatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................taatactcttcgaaaatctc-ttcaaaccgcgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003028_SP_1607_SP_1608|UDP-glucose 4-epimerase:oxidoreductase, DadA family protein|NEGATIVE:NEGATIVE|[1509447,1509746]|300 HSP 1 e-value: 2.0E-12 bit: 75.8 Len: 46 Query Start:152 Query End:197 Subject Strand: POSITIVE Subject Start: 105 Subject End: 150 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgcc.............................................................................................................................................................................................................................................................................................................................................................................................................. .......................................................................................................................................................atactcttcgaaaatccaattcaaactacgtcaacgtcgccttgcc.............................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-9 bit: 65.9 Len: 41 Query Start:215 Query End:255 Subject Strand: POSITIVE Subject Start: 260 Subject End: 300 ......................................................................................................................................................................................................................gcggctagtttcctagtttgctctttgattttcattgagta.................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................gcggctagtttcctagtttgttctttgatttttattgagta.................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003028_SP_0655_SP_0657|sodium/hydrogen exchanger family protein:ribonuclease BN, putative|POSITIVE:POSITIVE|[627719,627896]|178 HSP 1 e-value: 2.0E-12 bit: 75.8 Len: 50 Query Start:209 Query End:258 Subject Strand: POSITIVE Subject Start: 106 Subject End: 155 ................................................................................................................................................................................................................cagcctgcggctagtttcctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................cagcttgcggctagctttctagtttgctctttgattttcattgagtataa................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 1.0E-6 bit: 56.0 Len: 52 Query Start:149 Query End:200 Subject Strand: POSITIVE Subject Start: 1 Subject End: 51 ....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................ttaatactcttcgaaaatctc-ttcaaaccacgtcagcgtcgccttaccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_008533_SPD_1408_SPD_1409|hypothetical protein:sugar ABC transporter, ATP-binding protein|NEGATIVE:NEGATIVE|[1427612,1428111]|500 HSP 1 e-value: 6.0E-12 bit: 73.8 Len: 41 Query Start:216 Query End:256 Subject Strand: NEGATIVE Subject Start: 201 Subject End: 241 .......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgatttccattgagtat................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-12 bit: 73.8 Len: 53 Query Start:149 Query End:201 Subject Strand: NEGATIVE Subject Start: 303 Subject End: 354 ....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtac.......................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................ttaatactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgtac.......................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003098_spr1436_spr1437|hypothetical protein:ABC transporter ATP-binding protein - multiple sugar transport|NEGATIVE:NEGATIVE|[1420081,1420580]|500 HSP 1 e-value: 6.0E-12 bit: 73.8 Len: 41 Query Start:216 Query End:256 Subject Strand: NEGATIVE Subject Start: 201 Subject End: 241 .......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgatttccattgagtat................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-12 bit: 73.8 Len: 53 Query Start:149 Query End:201 Subject Strand: NEGATIVE Subject Start: 303 Subject End: 354 ....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtac.......................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................ttaatactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgtac.......................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003028_SP_1579_SP_1580|hypothetical protein:sugar ABC transporter, ATP-binding protein|NEGATIVE:NEGATIVE|[1484730,1485134]|405 HSP 1 e-value: 6.0E-12 bit: 73.8 Len: 41 Query Start:216 Query End:256 Subject Strand: NEGATIVE Subject Start: 106 Subject End: 146 .......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgatttccattgagtat................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-12 bit: 73.8 Len: 53 Query Start:149 Query End:201 Subject Strand: NEGATIVE Subject Start: 208 Subject End: 259 ....................................................................................................................................................ttaatactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgtac.......................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................ttaatactcttcgaaaatctc-ttcaaaccacgtcaacgtcgccttgccgtac.......................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_003028_SP_0120_SP_0121|glucose-inhibited division protein A:metallo-beta-lactamase superfamily protein|POSITIVE:NEGATIVE|[124699,125050]|352 HSP 1 e-value: 6.0E-12 bit: 73.8 Len: 41 Query Start:216 Query End:256 Subject Strand: POSITIVE Subject Start: 248 Subject End: 288 .......................................................................................................................................................................................................................cggctagtttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................cggctagcttcctagtttgctctttgattttcattgagtat................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-7 bit: 58.0 Len: 49 Query Start:152 Query End:200 Subject Strand: POSITIVE Subject Start: 138 Subject End: 185 .......................................................................................................................................................atactcttcgaaaatcaaattcaaaccacgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................atactcttcgaaaatctc-ttcaaaccgcgtcaacgtcgccttgccgta........................................................................................................................................................................................................................................................................................................................................................................................................... Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UUUUAUAGGUGAGUUAUUGAUUAUCUCAACUAUCAAAUUUUAAGUAAAUAAUUUCAAAAUCAGAAAGGGAUUGCUUUAUGCAGUUCCUUUUUAAUGUAAAAGGAGUGGAAUCAUAGCGUUUCUAAAUUGUUAAUACUCUUCGAAAAUCAAAUUCAAACCACGUCAACGUCGCCUUGCCGUACUCAAGUACAGCCUGCGGCUAGUUUCCUAGUUUGCUCUUUGAUUUUCAUUGAGUAUAAUAAUUCAAAACUGAUUGUGAUGGGACUAUUCUAGCUUUAGAAUCCUUCAAAAAUUAAAAUUUAAGGCAAUCAAUGUUUUAGAAGAGUGCGAAAACAUUUAGUUUAUAGGAAUUCUAGAUCUAGAAUUGCAUAGAUAUUUAUGAAGUUAGAGUAUUCGAUAGUUAGGAUUGUUCUAUUCUGAAAGAUUUGAGCUGUCAAUUGUAUAG (((.((((.((((.((.....)).)))).)))).))).....((((..((((((((.....(((((((((((((.....))))))))))))).((((((....(((...((((((((((((...((((((((.(((((...((((((((((..(((((...(..((((((((...((.((((....)))).))..)))))..)))..)..)))))...))))))))))...)))))))))))))..)))).).)))))))...)))..(((((.(((((((((((....((((((((.(((((((((.....)))))))))...((......)).))))))))..))).)))))))).))))).)))))).........))))))))...)))).(((((((..((((.(((......))).))))..))))))).......... (-116.30) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ CUAUACAAUUGACAGCUCAAAUCUUUCAGAAUAGAACAAUCCUAACUAUCGAAUACUCUAACUUCAUAAAUAUCUAUGCAAUUCUAGAUCUAGAAUUCCUAUAAACUAAAUGUUUUCGCACUCUUCUAAAACAUUGAUUGCCUUAAAUUUUAAUUUUUGAAGGAUUCUAAAGCUAGAAUAGUCCCAUCACAAUCAGUUUUGAAUUAUUAUACUCAAUGAAAAUCAAAGAGCAAACUAGGAAACUAGCCGCAGGCUGUACUUGAGUACGGCAAGGCGACGUUGACGUGGUUUGAAUUUGAUUUUCGAAGAGUAUUAACAAUUUAGAAACGCUAUGAUUCCACUCCUUUUACAUUAAAAAGGAACUGCAUAAAGCAAUCCCUUUCUGAUUUUGAAAUUAUUUACUUAAAAUUUGAUAGUUGAGAUAAUCAAUAACUCACCUAUAAAA .......(((((.........(((........)))...(((.((((((((((((.......................((.(((((((...((((((.(((.((((......((((..(((.((............)).)))...)))).......)))).)))))))))...))))))).))....(((.(((((((((((((((.((((((((..(((((((((((...((((((((..(((..(((....(((((((....)))))))..)))...)))..).)))))))..)))))))))))..))))).))).)))))))))..((((((.......(((((((......)))))))....)))..))).........)))))).)))...............)))))))))))).)))..)))))............... (-104.72) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1061 210 161 217 168 smit:SMT_662|5end_A/G-specific_adenine_glycosylase_573827..574057_NEGATIVE 1017 220 171 210 161 smit:SMT_1535|5end_exodeoxyribonuclease_V_alpha_chain_1518067..1518297_POSITIVE 989 220 171 192 143 smit:SMT_2133|5end_hypothetical_protein_2014007..2014237_NEGATIVE 989 220 171 192 143 smit:SMT_872|5end_hypothetical_protein_820618..820848_NEGATIVE 989 220 171 192 143 smit:SMT_385|5end_hypothetical_protein_319895..320125_POSITIVE 921 190 141 227 178 smit:SMT_1139|5end_rRNA_(guanine-N1-)-methyltransferase_1079755..1079985_POSITIVE 817 236 191 97 52 smit:SMT_123|5end_hypothetical_protein_75391..75621_POSITIVE 774 237 191 98 52 smit:SMT_1494|5end_nucleoside_diphosphate_kinase_1479500..1479730_POSITIVE 773 237 191 98 52 smit:SMT_1911|5end_hypothetical_protein_1857614..1857844_POSITIVE 714 239 191 100 52 smit:SMT_867|5end_hypothetical_protein_816316..816546_POSITIVE 701 180 133 198 152 smit:SMT_236|5end_ribosomal_small_subunit_pseudouridine_synthase_A_174625..174855_POSITIVE 695 237 191 98 52 smit:SMT_2086|5end_hypothetical_protein_1983696..1983926_NEGATIVE 628 237 191 201 155 smit:SMT_740|5end_50S_ribosomal_protein_L10_644116..644346_NEGATIVE 590 181 150 155 124 smit:SMT_604|5end_DNA_polymerase_III,_epsilon_chain_518693..518923_POSITIVE 512 177 133 210 167 smit:SMT_218|5end_undecaprenyl_pyrophosphate_synthetase_150155..150385_POSITIVE 495 165 132 228 195 smit:SMT_826|5end_hypothetical_protein_750022..750252_NEGATIVE 470 176 131 173 121 smit:SMT_1783|5end_peptide_methionine_sulfoxide_reductase_1759756..1759986_POSITIVE 446 168 121 231 190 smit:SMT_496|5end_superoxide_dismutase,_manganese-dependent_430433..430663_POSITIVE 399 177 133 207 165 smit:SMT_1592|5end_putative_hemolysin_1579655..1579885_POSITIVE 394 197 151 231 174 smit:SMT_1541|5end_isopentenyl-diphosphate_delta-isomerase_1526093..1526323_NEGATIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 989 220 171 77 28 smit:SMT_2134|3end_hypothetical_protein_2014122..2014272_NEGATIVE 989 220 171 77 28 smit:SMT_873|3end_hypothetical_protein_820733..820883_NEGATIVE 989 220 171 77 28 smit:SMT_384|3end_hypothetical_protein_319860..320010_POSITIVE 911 220 171 74 25 smit:SMT_1670|3end_K02030_polar_amino_acid_transport_system_substrate-binding_protein_1659295..1659445_POSITIVE 911 220 171 53 4 smit:SMT_1068|3end_ATP-dependent_DNA_helicase_RecG_1008986..1009136_POSITIVE 863 230 183 48 1 smit:SMT_663|3end_phosphate_acetyltransferase_574016..574166_NEGATIVE 833 237 191 77 31 smit:SMT_235|3end_hypothetical_protein_174391..174541_POSITIVE 830 237 191 91 45 smit:SMT_1075|3end_hypothetical_protein_1013870..1014020_POSITIVE 822 239 191 59 11 smit:SMT_1217|3end_hypothetical_protein_1176166..1176316_NEGATIVE 779 220 171 74 25 smit:SMT_1689|3end_PTS_enzyme,_maltose-and_glucose-specific,_factor_II_homologue_1673139..1673289_POSITIVE 773 237 191 58 12 smit:SMT_1910|3end_pyruvate-formate_lyase_activating_enzyme_1857654..1857804_POSITIVE 772 239 191 55 7 smit:SMT_916|3end_3-hydroxy-3-methylglutaryl-CoA_reductase_868730..868880_NEGATIVE 767 237 191 87 41 smit:SMT_451|3end_thiamine-phosphate_pyrophosphorylase_389647..389797_POSITIVE 727 237 191 91 45 smit:SMT_951|3end_oxidoreductase,_DadA_family_protein/D-amino_acid_oxidase_898995..899145_NEGATIVE 715 234 191 88 45 smit:SMT_1625|3end_DNA_polymerase_IV_1615066..1615216_POSITIVE 664 237 197 41 1 smit:SMT_1356|3end_fibronectin-binding_protein-like_protein_A_1334269..1334419_POSITIVE 652 237 192 46 1 smit:SMT_1535|3end_exodeoxyribonuclease_V_alpha_chain_1520513..1520663_POSITIVE 629 180 133 81 35 smit:SMT_131|3end_phosphatase,_putative_83031..83181_NEGATIVE 629 180 133 146 100 smit:SMT_123|3end_hypothetical_protein_75623..75773_POSITIVE 470 176 131 77 25 smit:SMT_1782|3end_hypothetical_protein_1759740..1759890_POSITIVE