Origin IGS:
ggaaacgctgttaaaaattttgcagcgttttttatatatcttcttaaaatatttgtacacacaaatgacagtcaaattgatttttgggattattttatcgagaaggaaagatttctcataatatgactttgcgagctcagagtctgtatacacacactcccaaaatcatcccaaaatttgtatacacaaagtgtatgtactttttgggatgatttgaattttggggaatccccaaacccctgatgaattatacgagcaaaaaaatacccgctatgcgggtgtgtactgacccccaaaagttagacagaaaaaatctaacttttggggtcagtacaaaagcgtttttattgtataaagaatatcaaatagtttgagggttttacttgtcgctgtatttcttcactatcctttttgtaatactcctgctttgttcctgaaatatctacagtgaatacgtcatccttgaaggtataattctcttttcggtttatgatattagagccagtcggttcgattgttgcactgtctttatcaattgtaaaggtgtcggcctctcctttgttgctatttcctttgttacctgaaatggtaaaggcaacttcatttctactctcgtttattcaacggtattcgccatctaaagaattgcttgattggttagaacatgcaattaataaaattgtagatagagacactaaaagtaatgtgataaatcttttcatttacatactttttatttctatattatattaaagaaacattacataagtaagaaagtaattttttaggttgatctctttctttcgggaaaatcattatgtttcggaaagtcaagattttgttattatttatgatatactggtaccgtaattatatccttacagaggttaagtaagggtttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggtatttt
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9
aaaatacctcattcaaatatatttttgaatgtattctaacattaaactttgtagatgtcaacttaaaatctaccaaaatatagataagaagttagtgtaccaaatattaaaaagccctgccatcgaaatgacagcagggcttaaacttcaatatccagatgatatatttatctaaaaaaggtagagtttttattgatttgtagtgtgatataatgagtttccaaaaatcaaaaatcgcttaaaatcaatattttgacatctattgacgtgtactgaaacccttacttaacctctgtaaggatataattacggtaccagtatatcataaataataacaaaatcttgactttccgaaacataatgattttcccgaaagaaagagatcaacctaaaaaattactttcttacttatgtaatgtttctttaatataatatagaaataaaaagtatgtaaatgaaaagatttatcacattacttttagtgtctctatctacaattttattaattgcatgttctaaccaatcaagcaattctttagatggcgaataccgttgaataaacgagagtagaaatgaagttgcctttaccatttcaggtaacaaaggaaatagcaacaaaggagaggccgacacctttacaattgataaagacagtgcaacaatcgaaccgactggctctaatatcataaaccgaaaagagaattataccttcaaggatgacgtattcactgtagatatttcaggaacaaagcaggagtattacaaaaaggatagtgaagaaatacagcgacaagtaaaaccctcaaactatttgatattctttatacaataaaaacgcttttgtactgaccccaaaagttagattttttctgtctaacttttgggggtcagtacacacccgcatagcgggtatttttttgctcgtataattcatcaggggtttggggattccccaaaattcaaatcatcccaaaaagtacatacactttgtgtatacaaattttgggatgattttgggagtgtgtgtatacagactctgagctcgcaaagtcatattatgagaaatctttccttctcgataaaataatcccaaaaatcaatttgactgtcatttgtgtgtacaaatattttaagaagatatataaaaaacgctgcaaaatttttaacagcgtttcc

Mask Tandem Repeat Region ================================================
ggaaacgctgttaaaaattttgcagcgttttttatatatcttcttaaaatatttgtacacacaaatgacagtcaaattgatttttgggattattttatcgagaaggaaagatttctcataatatgactttgcgagctcagagtctgtatacacacactcccaaaatcatcccaaaatttgtatacacaaagtgtatgtactttttgggatgatttgaattttggggaatccccaaacccctgatgaattatacgagcaaaaaaatacccgctatgcgggtgtgtactgacccccaaaagttagacagaaaaaatctaacttttggggtcagtacaaaagcgtttttattgtataaagaatatcaaatagtttgagggttttacttgtcgctgtatttcttcactatcctttttgtaatactcctgctttgttcctgaaatatctacagtgaatacgtcatccttgaaggtataattctcttttcggtttatgatattagagccagtcggttcgattgttgcactgtctttatcaattgtaaaggtgtcggcctctcctttgttgctatttcctttgttacctgaaatggtaaaggcaacttcatttctactctcgtttattcaacggtattcgccatctaaagaattgcttgattggttagaacatgcaattaataaaattgtagatagagacactaaaagtaatgtgataaatcttttcatttacatactttttatttctatattatattaaagaaacattacataagtaagaaagtaattttttaggttgatctctttctttcgggaaaatcattatgtttcggaaagtcaagattttgttattatttatgatatactggtaccgtaattatatccttacagaggttaagtaagggtttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggtatttt

Find is-nt database================================================
Query_seq: SMT_1232:SMT_1233|SMT_1232:SMT_1233:hypothetical protein predicted by Glimmer/Critica:cadmium resistance protein:->->:1193270..1194445 1176
ggaaacgctgttaaaaattttgcagcgttttttatatatcttcttaaaatatttgtacacacaaatgacagtcaaattgatttttgggattattttatcgagaaggaaagatttctcataatatgactttgcgagctcagagtctgtatacacacactcccaaaatcatcccaaaatttgtatacacaaagtgtatgtactttttgggatgatttgaattttggggaatccccaaacccctgatgaattatacgagcaaaaaaatacccgctatgcgggtgtgtactgacccccaaaagttagacagaaaaaatctaacttttggggtcagtacaaaagcgtttttattgtataaagaatatcaaatagtttgagggttttacttgtcgctgtatttcttcactatcctttttgtaatactcctgctttgttcctgaaatatctacagtgaatacgtcatccttgaaggtataattctcttttcggtttatgatattagagccagtcggttcgattgttgcactgtctttatcaattgtaaaggtgtcggcctctcctttgttgctatttcctttgttacctgaaatggtaaaggcaacttcatttctactctcgtttattcaacggtattcgccatctaaagaattgcttgattggttagaacatgcaattaataaaattgtagatagagacactaaaagtaatgtgataaatcttttcatttacatactttttatttctatattatattaaagaaacattacataagtaagaaagtaattttttaggttgatctctttctttcgggaaaatcattatgtttcggaaagtcaagattttgttattatttatgatatactggtaccgtaattatatccttacagaggttaagtaagggtttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggtatttt
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find is-aa database================================================
Query_seq: SMT_1232:SMT_1233|SMT_1232:SMT_1233:hypothetical protein predicted by Glimmer/Critica:cadmium resistance protein:->->:1193270..1194445 1176
ggaaacgctgttaaaaattttgcagcgttttttatatatcttcttaaaatatttgtacacacaaatgacagtcaaattgatttttgggattattttatcgagaaggaaagatttctcataatatgactttgcgagctcagagtctgtatacacacactcccaaaatcatcccaaaatttgtatacacaaagtgtatgtactttttgggatgatttgaattttggggaatccccaaacccctgatgaattatacgagcaaaaaaatacccgctatgcgggtgtgtactgacccccaaaagttagacagaaaaaatctaacttttggggtcagtacaaaagcgtttttattgtataaagaatatcaaatagtttgagggttttacttgtcgctgtatttcttcactatcctttttgtaatactcctgctttgttcctgaaatatctacagtgaatacgtcatccttgaaggtataattctcttttcggtttatgatattagagccagtcggttcgattgttgcactgtctttatcaattgtaaaggtgtcggcctctcctttgttgctatttcctttgttacctgaaatggtaaaggcaacttcatttctactctcgtttattcaacggtattcgccatctaaagaattgcttgattggttagaacatgcaattaataaaattgtagatagagacactaaaagtaatgtgataaatcttttcatttacatactttttatttctatattatattaaagaaacattacataagtaagaaagtaattttttaggttgatctctttctttcgggaaaatcattatgtttcggaaagtcaagattttgttattatttatgatatactggtaccgtaattatatccttacagaggttaagtaagggtttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggtatttt
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find nr database================================================
Query_seq: SMT_1232:SMT_1233|SMT_1232:SMT_1233:hypothetical protein predicted by Glimmer/Critica:cadmium resistance protein:->->:1193270..1194445 1176
ggaaacgctgttaaaaattttgcagcgttttttatatatcttcttaaaatatttgtacacacaaatgacagtcaaattgatttttgggattattttatcgagaaggaaagatttctcataatatgactttgcgagctcagagtctgtatacacacactcccaaaatcatcccaaaatttgtatacacaaagtgtatgtactttttgggatgatttgaattttggggaatccccaaacccctgatgaattatacgagcaaaaaaatacccgctatgcgggtgtgtactgacccccaaaagttagacagaaaaaatctaacttttggggtcagtacaaaagcgtttttattgtataaagaatatcaaatagtttgagggttttacttgtcgctgtatttcttcactatcctttttgtaatactcctgctttgttcctgaaatatctacagtgaatacgtcatccttgaaggtataattctcttttcggtttatgatattagagccagtcggttcgattgttgcactgtctttatcaattgtaaaggtgtcggcctctcctttgttgctatttcctttgttacctgaaatggtaaaggcaacttcatttctactctcgtttattcaacggtattcgccatctaaagaattgcttgattggttagaacatgcaattaataaaattgtagatagagacactaaaagtaatgtgataaatcttttcatttacatactttttatttctatattatattaaagaaacattacataagtaagaaagtaattttttaggttgatctctttctttcgggaaaatcattatgtttcggaaagtcaagattttgttattatttatgatatactggtaccgtaattatatccttacagaggttaagtaagggtttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggtatttt
Intra-Species Hit: Count: 0

Inter-species Hit: Count: 2	Min: 363	Max: 668	Len: 306
Subject: UniRef90_Q70C94 Cluster: Hypothetical protein; n=1; Streptococcus thermophilus|Rep: Hypothetical protein - Streptococcus thermophilus
HSP  1	e-value: 2.0E-12	bit: 76.3	Len: 306	Query Start:363	Query End:668	Subject Strand: null	Subject Start: 20	Subject End: 122
.......................................................................................................................................................................................................................................................................................................................................................................... A  C  S  N  Q  S  S  N  S  L  D  G  E  Y  R  *  I  -  -  -  N  E  S  R  N  E  V  A  F  T  I  S  G  N  K  G  N  S  N  K  G  E  A  D  T  F  T  I  D  K  D  S  A  T  I  E  P  T  G  S  N  I  I  N  R  K  E  N  Y  T  F  K  D  D  V  F  T  V  D  I  S  G  T  K  Q  E  Y  Y  K  K  D  S  E  E  I  Q  R  Q  V  K  P  S  N  Y  L ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
.......................................................................................................................................................................................................................................................................................................................................................................... S  C  S  S  Q  -  -  D  N  L  D  G  N  Y  Y  W  I  D  T  E  N  G  L  R  N  E  L  S  F  T  V  K  G  T  A  G  T  V  E  K  G  E  Y  D  K  F  T  I  N  S  K  N  N  T  F  E  L  S  G  D  D  A  S  A  K  E  V  T  Y  K  H  S  D  G  V  I  T  V  D  I  S  G  T  E  H  E  Y  Y  K  E  G  T  D  A  Y  K  E  A  V  N  K  Y  N  E  L ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

Subject: UniRef90_Q1JFT8 Cluster: Hypothetical exported protein; n=3; Streptococcus|Rep: Hypothetical exported protein - Streptococcus pyogenes serotype M2 (strain MGAS10270)
HSP  1	e-value: 8.0E-7	bit: 57.8	Len: 303	Query Start:366	Query End:668	Subject Strand: null	Subject Start: 20	Subject End: 112
............................................................................................................................................................................................................................................................................................................................................................................. A  C  S  N  Q  S  S  N  S  L  D  G  E  Y  R  *  I  N  E  S  R  N  E  V  A  F  T  I  S  G  N  K  G  N  S  N  K  G  E  A  D  T  F  T  I  D  K  D  S  A  T  I  E  P  T  G  S  N  I  I  N  R  K  E  N  Y  T  F  K  D  D  V  F  T  V  D  I  S  G  T  K  Q  E  Y  Y  K  K  D  S  E  E  I  Q  R  Q  V  K  P  S  N  Y ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
............................................................................................................................................................................................................................................................................................................................................................................. A  C  S  N  -  -  -  D  S  L  E  G  E  Y  Y  W  I  N  D  A  R  N  Q  H  M  A  T  I  K  G  D  K  G  Y  V  E  S  E  G  G  Y  S  I  K  I  D  S  E  L  K  I  I  E  S  K  F  G  S  -  -  -  -  -  E  K  Y  S  Y  K  D  G  K  L  T  T  N  F  T  G  V  E  S  D  F  Y  K  K  G  S  K  A  C  E  E  A  L  K  K  Y  G  Y ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................


ggaaacgctgttaaaaattttgcagcgttttttatatatcttcttaaaatatttgtacacacaaatgacagtcaaattgatttttgggattattttatcgagaaggaaagatttctcataatatgactttgcgagctcagagtctgtatacacacactcccaaaatcatcccaaaatttgtatacacaaagtgtatgtactttttgggatgatttgaattttggggaatccccaaacccctgatgaattatacgagcaaaaaaatacccgctatgcgggtgtgtactgacccccaaaagttagacagaaaaaatctaacttttggggtcagtacaaaagcgtttttattgtataaagaatatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaattaataaaattgtagatagagacactaaaagtaatgtgataaatcttttcatttacatactttttatttctatattatattaaagaaacattacataagtaagaaagtaattttttaggttgatctctttctttcgggaaaatcattatgtttcggaaagtcaagattttgttattatttatgatatactggtaccgtaattatatccttacagaggttaagtaagggtttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggtatttt
Predict ORF larger than 30AA ================================================
Protein_Len: 37	Strand: +	Start: 8	End: 118
....... M  L  K  I  L  Q  R  F  L  Y  I  F  L  K  Y  L  Y  T  Q  M  T  V  K  L  I  F  G  I  I  L  S  R  R  K  D  F  S ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 30	Strand: +	Start: 34	End: 123
................................. M  Y  L  L  K  I  F  V  H  T  N  D  S  Q  I  D  F  W  D  Y  F  I  E  K  E  R  F  L  I  I .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 42	Strand: +	Start: 84	End: 209
................................................................................... M  G  L  F  Y  R  E  G  K  I  S  H  N  M  T  L  R  A  Q  S  L  Y  T  H  T  P  K  I  I  P  K  F  V  Y  T  K  C  M  Y  F  L  G .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 31	Strand: +	Start: 148	End: 240
................................................................................................................................................... M  H  T  L  P  K  S  S  Q  N  L  Y  T  Q  S  V  C  T  F  W  D  D  L  N  F  G  E  S  P  N  P ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 48	Strand: +	Start: 228	End: 371
................................................................................................................................................................................................................................... M  P  K  P  L  M  N  Y  T  S  K  K  I  P  A  M  R  V  C  T  D  P  Q  K  L  D  R  K  N  L  T  F  G  V  S  T  K  A  F  L  L  Y  K  E  Y  Q  I  V .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 30	Strand: +	Start: 359	End: 448
...................................................................................................................................................................................................................................................................................................................................................................... M  S  N  S  L  R  V  L  L  V  A  V  F  L  H  Y  P  F  C  N  T  P  A  L  F  L  K  Y  L  Q ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 47	Strand: +	Start: 441	End: 581
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ M  Y  S  E  Y  V  I  L  E  G  I  I  L  F  S  V  Y  D  I  R  A  S  R  F  D  C  C  T  V  F  I  N  C  K  G  V  G  L  S  F  V  A  I  S  F  V  T ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 60	Strand: +	Start: 490	End: 750
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M  I  L  E  P  V  G  S  I  V  A  L  S  L  S  I  V  K  V  S  A  S  P  L  L  L  F  P  L  L  P  E  M  V  K  A  T  S  F  L  L  S  F  I  Q  R  Y  S  P  S  K  E  L  L  D  W  L  E  H  A ..........................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 42	Strand: +	Start: 942	End: 1067
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M  F  D  F  W  K  L  I  I  S  H  Y  K  S  I  K  T  L  P  F  L  D  K  Y  I  I  W  I  L  K  F  K  P  C  C  H  F  D  G  R  A  F .............................................................................................................
Protein_Len: 48	Strand: -	Start: 1005	End: 1148
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ I  F  I  D  D  P  Y  Q  L  K  L  G  A  T  M  E  I  A  P  S  K  L  I  Q  Y  V  L  K  K  D  I  N  Q  Y  I  K  L  Q  C  R  C  L  K  I  N  S  Y  M ............................
Protein_Len: 36	Strand: -	Start: 748	End: 855
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... I  L  S  V  N  C  L  Y  S  L  L  K  K  P  Q  D  R  E  K  P  F  I  M  I  N  R  F  T  L  I  K  N  N  N  I  M .................................................................................................................................................................................................................................................................................................................................
Protein_Len: 33	Strand: -	Start: 624	End: 722
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... R  Y  E  G  D  L  S  N  S  S  Q  N  S  C  A  I  L  L  I  T  S  L  S  V  L  L  L  T  I  F  R  K  M ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 38	Strand: -	Start: 491	End: 604
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... S  I  L  A  L  R  N  S  Q  Q  V  T  K  I  L  Q  L  P  T  P  R  E  K  T  A  I  E  K  T  V  Q  F  P  L  P  L  K  M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 60	Strand: -	Start: 348	End: 620
........................................................................................................................................................................................................................................................................................................................................................... D  V  T  F  V  D  D  K  F  T  Y  N  E  K  R  N  I  I  N  S  G  T  P  E  I  T  A  S  D  K  D  I  T  F  T  D  A  E  G  K  N  S  N  G  K  N  G  S  I  T  F  A  V  E  N  R  S  E  N  M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 35	Strand: -	Start: 140	End: 244
........................................................................................................................................... L  R  Y  V  C  V  G  L  I  M  G  F  N  T  Y  V  F  H  I  Y  K  K  P  H  N  S  N  Q  P  I  G  L  G  R  M ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 60	Strand: -	Start: 93	End: 296
............................................................................................ M  I  H  S  Q  S  S  L  T  Q  I  C  V  S  G  F  D  D  W  F  K  Y  V  C  L  T  H  V  K  Q  S  S  K  F  K  P  S  D  G  F  G  Q  H  I  I  R  A  F  F  Y  G  S  H  P  H  T  S  V  G  M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 51	Strand: -	Start: 1	End: 153
 S  V  S  N  F  I  K  C  R  K  K  Y  I  K  K  F  Y  K  Y  V  C  I  V  T  L  N  I  K  P  I  I  K  D  L  L  F  S  K  E  Y  Y  S  K  A  L  E  S  D  T  Y  M ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

ggaaacgctgttaaaaattttgcagcgttttttatatatcttcttaaaatatttgtacacacaaatgacagtcaaattgatttttgggattattttatcgagaaggaaagatttctcataatatgactttgcgagctcagagtctgtatacacacactcccaaaatcatcccaaaatttgtatacacaaagtgtatgtactttttgggatgatttgaattttggggaatccccaaacccctgatgaattatacgagcaaaaaaatacccgctatgcgggtgtgtactgacccccaaaagttagacagaaaaaatctaacttttggggtcagtacaaaagcgtttttattgtataaagaatatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaattaataaaattgtagatagagacactaaaagtaatgtgataaatcttttcatttacatactttttatttctatattatattaaagaaacattacataagtaagaaagtaattttttaggttgatctctttctttcgggaaaatcattatgtttcggaaagtcaagattttgttattatttatgatatactggtaccgtaattatatccttacagaggttaagtaagggtttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggtatttt
Predict Promoter with matrix: RpoD-15 score > 80================================================

Predict Promoter with matrix: RpoD-16 score > 80================================================

Predict Promoter with matrix: RpoD-17 score > 80================================================
PromScan Matrix: RpoD-17	Strand: +	Score: 91	Start: 1115	End: 1144
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGACATCTACAAAGTTTAATGTTAGAAT................................
PromScan Matrix: RpoD-17	Strand: -	Score: 81	Start: 514	End: 543
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTACAATTGATAAAGACAGTGCAACAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

Predict Promoter with matrix: RpoD-18 score > 80================================================

Predict Promoter with matrix: RpoD-19 score > 80================================================

Predict Promoter with matrix: RpoN score > 80================================================

ggaaacgctgttaaaaattttgcagcgttttttatatatcttcttaaaatatttgtacacacaaatgacagtcaaattgatttttgggattattttatcgagaaggaaagatttctcataatatgactttgcgagctcagagtctgtatacacacactcccaaaatcatcccaaaatttgtatacacaaagtgtatgtactttttgggatgatttgaattttggggaatccccaaacccctgatgaattatacgagcaaaaaaatacccgctatgcgggtgtgtactgacccccaaaagttagacagaaaaaatctaacttttggggtcagtacaaaagcgtttttattgtataaagaatatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaattaataaaattgtagatagagacactaaaagtaatgtgataaatcttttcatttacatactttttatttctatattatattaaagaaacattacataagtaagaaagtaattttttaggttgatctctttctttcgggaaaatcattatgtttcggaaagtcaagattttgttattatttatgatatactggtaccgtaattatatccttacagaggttaagtaagggtttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggtatttt
Predict TransTerm conf > 70================================================
TransTerm Strand: -	Conf: 86	HP_score: -9.6	Tail_Score: -4.13728	Start: 166	End: 212	Full_Region: tccccaaaattcaaa tcatcccaaaaagtacatacac ttt gtgtatacaaattttgggatga ttttgggagtgtgtg
.....................................................................................................................................................................tcatcccaaaaagtacatacactttgtgtatacaaattttgggatga....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
TransTerm Strand: +	Conf: 100	HP_score: -14.0	Tail_Score: -3.92659	Start: 166	End: 212	Full_Region: CACACACTCCCAAAA TCATCCCAAAATTTGTATACAC AAA GTGTATGTACTTTTTGGGATGA TTTGAATTTTGGGGA
.....................................................................................................................................................................TCATCCCAAAATTTGTATACACAAAGTGTATGTACTTTTTGGGATGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
TransTerm Strand: -	Conf: 100	HP_score: -7.9	Tail_Score: -5.56568	Start: 265	End: 281	Full_Region: ttgggggtcagtaca cacccgc ata gcgggta tttttttgctcgtat
........................................................................................................................................................................................................................................................................cacccgcatagcgggta...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
TransTerm Strand: -	Conf: 95	HP_score: -10.5	Tail_Score: -4.41456	Start: 267	End: 279	Full_Region: gggggtcagtacaca cccgc ata gcggg tatttttttgctcgt
..........................................................................................................................................................................................................................................................................cccgcatagcggg.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
TransTerm Strand: +	Conf: 81	HP_score: -10.5	Tail_Score: -2.94099	Start: 267	End: 279	Full_Region: ACGAGCAAAAAAATA CCCGC TAT GCGGG TGTGTACTGACCCCC
..........................................................................................................................................................................................................................................................................CCCGCTATGCGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
TransTerm Strand: +	Conf: 100	HP_score: -12.3	Tail_Score: -4.946	Start: 1037	End: 1063	Full_Region: GATATTGAAGTTTAA GCCCTGCTGTC ATTTC GATGGCAGGGC TTTTTAATATTTGGT
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTGCTGTCATTTCGATGGCAGGGC.................................................................................................................

Find igs database================================================
Query_seq: SMT_1232:SMT_1233|SMT_1232:SMT_1233:hypothetical protein predicted by Glimmer/Critica:cadmium resistance protein:->->:1193270..1194445 1176
ggaaacgctgttaaaaattttgcagcgttttttatatatcttcttaaaatatttgtacacacaaatgacagtcaaattgatttttgggattattttatcgagaaggaaagatttctcataatatgactttgcgagctcagagtctgtatacacacactcccaaaatcatcccaaaatttgtatacacaaagtgtatgtactttttgggatgatttgaattttggggaatccccaaacccctgatgaattatacgagcaaaaaaatacccgctatgcgggtgtgtactgacccccaaaagttagacagaaaaaatctaacttttggggtcagtacaaaagcgtttttattgtataaagaatatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaattaataaaattgtagatagagacactaaaagtaatgtgataaatcttttcatttacatactttttatttctatattatattaaagaaacattacataagtaagaaagtaattttttaggttgatctctttctttcgggaaaatcattatgtttcggaaagtcaagattttgttattatttatgatatactggtaccgtaattatatccttacagaggttaagtaagggtttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggtatttt
Intra-Species Hit: Count: 1	Min: 1	Max: 1176	Len: 1176
Subject: smit_SMT_1232_SMT_1233|hypothetical protein predicted by Glimmer/Critica:cadmium resistance protein|POSITIVE:POSITIVE|[1193270,1194445]|1176
HSP  1	e-value: 0.0	bit: 1007.0	Len: 508	Query Start:669	Query End:1176	Subject Strand: POSITIVE	Subject Start: 669	Subject End: 1176
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aattaataaaattgtagatagagacactaaaagtaatgtgataaatcttttcatttacatactttttatttctatattatattaaagaaacattacataagtaagaaagtaattttttaggttgatctctttctttcgggaaaatcattatgtttcggaaagtcaagattttgttattatttatgatatactggtaccgtaattatatccttacagaggttaagtaagggtttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggtatttt
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aattaataaaattgtagatagagacactaaaagtaatgtgataaatcttttcatttacatactttttatttctatattatattaaagaaacattacataagtaagaaagtaattttttaggttgatctctttctttcgggaaaatcattatgtttcggaaagtcaagattttgttattatttatgatatactggtaccgtaattatatccttacagaggttaagtaagggtttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggtatttt
HSP  2	e-value: 0.0	bit: 676.0	Len: 362	Query Start:1	Query End:362	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 362
ggaaacgctgttaaaaattttgcagcgttttttatatatcttcttaaaatatttgtacacacaaatgacagtcaaattgatttttgggattattttatcgagaaggaaagatttctcataatatgactttgcgagctcagagtctgtatacacacactcccaaaatcatcccaaaatttgtatacacaaagtgtatgtactttttgggatgatttgaattttggggaatccccaaacccctgatgaattatacgagcnnnnnnntacccgctatgcgggtgtgtactgacccccaaaagttagacagaaaaaatctaacttttggggtcagtacaaaagcgtttttattgtataaagaatat..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
ggaaacgctgttaaaaattttgcagcgttttttatatatcttcttaaaatatttgtacacacaaatgacagtcaaattgatttttgggattattttatcgagaaggaaagatttctcataatatgactttgcgagctcagagtctgtatacacacactcccaaaatcatcccaaaatttgtatacacaaagtgtatgtactttttgggatgatttgaattttggggaatccccaaacccctgatgaattatacgagcaaaaaaatacccgctatgcgggtgtgtactgacccccaaaagttagacagaaaaaatctaacttttggggtcagtacaaaagcgtttttattgtataaagaatat..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................


Inter-species Hit: Count: 18	Min: 896	Max: 1176	Len: 281
Subject: NC_004368_gbs2063_gbs2064|50S ribosomal protein L33:hypothetical protein|POSITIVE:POSITIVE|[2137910,2138200]|291
HSP  1	e-value: 8.0E-87	bit: 323.0	Len: 187	Query Start:990	Query End:1176	Subject Strand: POSITIVE	Subject Start: 107	Subject End: 291
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggtatttt
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagataaatatatcatctggatattgaagtt-aagccctgctatcatttcgatggcagggctttttaatatttg-tacactaacttcttatctatattttggtggattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggtatttt
HSP  2	e-value: 1.0E-45	bit: 186.0	Len: 106	Query Start:896	Query End:1001	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 106
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gggtttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctacctttt...............................................................................................................................................................................
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gggtttcagtacacgtcaatagacgtcaaaatattgattttaagcgatttttgattttttgaaactcattatatcgcactacaaatcaataaaaactctacctttt...............................................................................................................................................................................

Subject: NC_008023_MGAS2096_Spy1848_MGAS2096_Spy1849|LSU ribosomal protein L33P:Cadmium resistance protein|POSITIVE:POSITIVE|[1808727,1809006]|280
HSP  1	e-value: 5.0E-82	bit: 307.0	Len: 175	Query Start:990	Query End:1164	Subject Strand: POSITIVE	Subject Start: 107	Subject End: 280
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttga............
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagataaatatatcatctggatattgaagtt-aagccctgctatcatttcgatggcagggctttttaatatttggtacactaacttattatctatattttggtggattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttga............
HSP  2	e-value: 1.0E-45	bit: 186.0	Len: 106	Query Start:896	Query End:1001	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 106
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gggtttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctacctttt...............................................................................................................................................................................
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gggtttcagtacacgtcaatagacgtcaaaatattgattttaagcgatttttgattttttgaaactcattatatcgcactacaaatcaataaaaactctacctttt...............................................................................................................................................................................

Subject: NC_008021_MGAS9429_Spy1827_MGAS9429_Spy1828|LSU ribosomal protein L33P:cadmium resistance protein|POSITIVE:POSITIVE|[1784850,1785129]|280
HSP  1	e-value: 5.0E-82	bit: 307.0	Len: 175	Query Start:990	Query End:1164	Subject Strand: POSITIVE	Subject Start: 107	Subject End: 280
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttga............
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagataaatatatcatctggatattgaagtt-aagccctgctatcatttcgatggcagggctttttaatatttggtacactaacttattatctatattttggtggattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttga............
HSP  2	e-value: 1.0E-45	bit: 186.0	Len: 106	Query Start:896	Query End:1001	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 106
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gggtttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctacctttt...............................................................................................................................................................................
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gggtttcagtacacgtcaatagacgtcaaaatattgattttaagcgatttttgattttttgaaactcattatatcgcactacaaatcaataaaaactctacctttt...............................................................................................................................................................................

Subject: NC_004606_SPs1815_SPs1816|50S ribosomal protein L33:putative cadmium resistance protein|POSITIVE:POSITIVE|[1842458,1842737]|280
HSP  1	e-value: 2.0E-78	bit: 295.0	Len: 277	Query Start:900	Query End:1176	Subject Strand: POSITIVE	Subject Start: 5	Subject End: 280
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggtatttt
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcactacacgtcattagacgtcaaaacattgattttaagcgatttttgaatttttgaagttcattacattgtaatataaatcaataagaactctaccttttttagatgaatatatcatttggatattgaagtt-aagccctgttatcatttggatggcagggcttttttatatttggtacactaacttcttatctatattttggtgtagctgaaattgacatctacaaagtttaatgttaaaattcattcaaaaatatatttgaatgaggtgtttt

Subject: NC_004070_SpyM3_1817_SpyM3_1818|50S ribosomal protein L33:putative cadmium resistance protein|POSITIVE:POSITIVE|[1848673,1848952]|280
HSP  1	e-value: 2.0E-78	bit: 295.0	Len: 277	Query Start:900	Query End:1176	Subject Strand: POSITIVE	Subject Start: 5	Subject End: 280
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggtatttt
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcactacacgtcattagacgtcaaaacattgattttaagcgatttttgaatttttgaagttcattacattgtaatataaatcaataagaactctaccttttttagatgaatatatcatttggatattgaagtt-aagccctgttatcatttggatggcagggcttttttatatttggtacactaacttcttatctatattttggtgtagctgaaattgacatctacaaagtttaatgttaaaattcattcaaaaatatatttgaatgaggtgtttt

Subject: NC_004116_SAG1265_SAG1266|cadmium resistance transporter, putative:hypothetical protein|NEGATIVE:POSITIVE|[1275760,1276298]|539
HSP  1	e-value: 7.0E-78	bit: 293.0	Len: 264	Query Start:909	Query End:1172	Subject Strand: NEGATIVE	Subject Start: 273	Subject End: 535
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggta....
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cgtcattagacgtcaaaacattgattttaagcgatttttgaatttttgaagttcattacattgcaatataaatcaataagaaatctaccttttttagatgaatatgtcctttggatattgaagtt-aagccctgttatcatttggatggcagggcttttttatatttggtacactaacttcttatctatattttggcggagctgaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggta....

Subject: NC_009009_SSA_2287_SSA_2288|50S ribosomal protein L32, putative:Cadmium resistance transporter, putative|POSITIVE:POSITIVE|[2290144,2290600]|457
HSP  1	e-value: 3.0E-74	bit: 281.0	Len: 186	Query Start:991	Query End:1176	Subject Strand: POSITIVE	Subject Start: 273	Subject End: 457
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ctctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggtatttt
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ctctaccttttttagataaatatatcatctggatattgaagtt-aagccctgctataatttcgatggcagggctttttaatatttggtacactaccttcttatctatattttgatggagctgaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggtgtttt

Subject: NC_008022_MGAS10270_Spy1908_MGAS10270_Spy1909|LSU ribosomal protein L33P:Cadmium resistance protein|POSITIVE:POSITIVE|[1861113,1861392]|280
HSP  1	e-value: 4.0E-70	bit: 268.0	Len: 175	Query Start:990	Query End:1164	Subject Strand: POSITIVE	Subject Start: 107	Subject End: 280
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttga............
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagatgaatatatcatttggatattgaagtt-aagccctgctatcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtggagctgaagttgacatctacaaagtttaatgttaaaatacattcaaaaatatatttga............
HSP  2	e-value: 5.0E-17	bit: 91.7	Len: 102	Query Start:900	Query End:1001	Subject Strand: POSITIVE	Subject Start: 5	Subject End: 106
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctacctttt...............................................................................................................................................................................
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcactacacgtcattagacgtcaaaacattgattttaagcgatttttgaatttttgaagttcattacattgcaatataaatcaataagaactctacctttt...............................................................................................................................................................................

Subject: NC_007297_M5005_Spy_1816_M5005_Spy_1817|50S ribosomal protein L33:cadmium resistance protein|POSITIVE:POSITIVE|[1785518,1785809]|292
HSP  1	e-value: 1.0E-60	bit: 236.0	Len: 187	Query Start:990	Query End:1176	Subject Strand: POSITIVE	Subject Start: 107	Subject End: 292
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggtatttt
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagatgaatatatcatttggatattgaagtt-aagccctgttatcatttggatggcagggcttttttatatttggtacactaacttcttatctatattttggtgtagctgaaattgacatctacaaagtttaatgttaaaattcattcaaaaatatatttgaatgaggtgtttt
HSP  2	e-value: 1.0E-14	bit: 83.8	Len: 102	Query Start:900	Query End:1001	Subject Strand: POSITIVE	Subject Start: 5	Subject End: 106
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctacctttt...............................................................................................................................................................................
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcactacacgtcattagacgtcaaaacattgattttaagcgatttttgaatttttgaagttcattacattgtaatataaatcaataagaactctacctttt...............................................................................................................................................................................

Subject: NC_008024_MGAS10750_Spy1933_MGAS10750_Spy1934|LSU ribosomal protein L33P:Cadmium resistance protein|POSITIVE:POSITIVE|[1889180,1889460]|281
HSP  1	e-value: 4.0E-58	bit: 228.0	Len: 175	Query Start:990	Query End:1164	Subject Strand: POSITIVE	Subject Start: 108	Subject End: 281
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttga............
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagatgaatatatcatttggatattgaagtt-aagccctgttatcatttggatggcagggcttttttatatttggtacactaacttcttatctatattttggtggagctgaaattgacatctacaaagtttaatgttaaaattcattcaaaaatatatttga............
HSP  2	e-value: 8.0E-13	bit: 77.8	Len: 102	Query Start:900	Query End:1001	Subject Strand: POSITIVE	Subject Start: 5	Subject End: 107
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttga-tttttggaaactcattatatcacactacaaatcaataaaaactctacctttt...............................................................................................................................................................................
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcactacacgtcattagacgtcaaaacattgattttaagcgatttttgaattttttgaagttcattacattgtaatataaatcaataagaactctacctttt...............................................................................................................................................................................

Subject: NC_006086_M6_Spy1835_M6_Spy1836|50S ribosomal protein L33:Cadmium resistance protein|POSITIVE:POSITIVE|[1846355,1846634]|280
HSP  1	e-value: 4.0E-58	bit: 228.0	Len: 175	Query Start:990	Query End:1164	Subject Strand: POSITIVE	Subject Start: 107	Subject End: 280
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttga............
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagatgaatctatcatttggatattgaagtt-aagccctgttatcatttcgatggcagggctttttaatatttggtacactaactccttatctatattttggtggagctgaaattgacatctacaaagtttaatgttaaaattcattcaaaaatatatttga............
HSP  2	e-value: 1.0E-14	bit: 83.8	Len: 102	Query Start:900	Query End:1001	Subject Strand: POSITIVE	Subject Start: 5	Subject End: 106
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctacctttt...............................................................................................................................................................................
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcactacacgtcattagacgtcaaaacgttgattttaagcgatttttgaatttttgaagttcattacattgcaatataaatcaataagaactctacctttt...............................................................................................................................................................................

Subject: NC_007296_M28_Spy1825_M28_Spy1826|50S ribosomal protein L33:cadmium resistance protein|POSITIVE:POSITIVE|[1834062,1834341]|280
HSP  1	e-value: 9.0E-56	bit: 220.0	Len: 175	Query Start:990	Query End:1164	Subject Strand: POSITIVE	Subject Start: 107	Subject End: 280
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttga............
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagatgaatatatcatttggatattgaagtt-aagccctgttatcatttggatggcagggcttttttatatttggtacactaacttcttatctatattttggtgtagctgaaattgacatctacaaagtttaatgttaaaattcattcaaaaatatatttga............
HSP  2	e-value: 3.0E-12	bit: 75.8	Len: 102	Query Start:900	Query End:1001	Subject Strand: POSITIVE	Subject Start: 5	Subject End: 106
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctacctttt...............................................................................................................................................................................
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcactacacgtcattagacgtcaaaacgttgattttaagcgatttttgaatttttgaagttcattacattgtaatataaatcaataagaactctacctttt...............................................................................................................................................................................

Subject: NC_003485_spyM18_2197_spyM18_2198|50S ribosomal protein L33:putative cadmium resistance protein|POSITIVE:POSITIVE|[1843429,1843709]|281
HSP  1	e-value: 9.0E-56	bit: 220.0	Len: 175	Query Start:990	Query End:1164	Subject Strand: POSITIVE	Subject Start: 108	Subject End: 281
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttga............
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagatgaatctatcatttggatattgaagtt-aggccctgttatcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtggagctgaagttgacatctataaagtttaatgttaatatacattcaaaaatacatttga............
HSP  2	e-value: 1.0E-17	bit: 93.7	Len: 102	Query Start:900	Query End:1001	Subject Strand: POSITIVE	Subject Start: 5	Subject End: 107
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttg-atttttggaaactcattatatcacactacaaatcaataaaaactctacctttt...............................................................................................................................................................................
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcactacacgtcattagacgtcaaaacattgattttaagcgatttttgaattttttgaagttcattacattgcaatataaatcaataaaaactctacctttt...............................................................................................................................................................................

Subject: NC_002737_SPy2160_SPy2162|50S ribosomal protein L33:putative cadmium resistance protein|POSITIVE:POSITIVE|[1799434,1799725]|292
HSP  1	e-value: 2.0E-53	bit: 212.0	Len: 187	Query Start:990	Query End:1176	Subject Strand: POSITIVE	Subject Start: 107	Subject End: 292
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagataaatatatcatctggatattgaagtttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatattttggtagattttaagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttgaatgaggtatttt
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................actctaccttttttagatgaatatatcatttggatattgaagtt-aagccctgttatcatttggatgggcaggcttttttatatttggtacactaacttcttatctatattttggtgtagctgaaattgacatctacaaagtttaatgttaaaattcattcaaaaatatatttgaatgaggtgtttt
HSP  2	e-value: 1.0E-14	bit: 83.8	Len: 102	Query Start:900	Query End:1001	Subject Strand: POSITIVE	Subject Start: 5	Subject End: 106
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcagtacacgtcaatagatgtcaaaatattgattttaagcgatttttgatttttggaaactcattatatcacactacaaatcaataaaaactctacctttt...............................................................................................................................................................................
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttcactacacgtcattagacgtcaaaacattgattttaagcgatttttgaatttttgaagttcattacattgtaatataaatcaataagaactctacctttt...............................................................................................................................................................................

Subject: NC_008767_NMC1927_NMC1928|CaDmium resistance protein:50S ribosomal protein L31|NEGATIVE:NEGATIVE|[1955793,1956094]|302
HSP  1	e-value: 6.0E-20	bit: 101.0	Len: 67	Query Start:1033	Query End:1099	Subject Strand: NEGATIVE	Subject Start: 219	Subject End: 285
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatat.............................................................................
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttaagccctgccatcatttcgatggcagggctttttaatatttggcacactgacttcttatctatat.............................................................................
HSP  2	e-value: 8.0E-16	bit: 87.7	Len: 52	Query Start:1113	Query End:1164	Subject Strand: NEGATIVE	Subject Start: 1	Subject End: 52
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttga............
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagttgacatctacaaagtttaatgtttgaatacattaaaaaatatatttga............

Subject: NC_003112_NMB1955_NMB1956|cadmium resistance protein:50S ribosomal protein L31|NEGATIVE:NEGATIVE|[2050975,2051276]|302
HSP  1	e-value: 6.0E-20	bit: 101.0	Len: 67	Query Start:1033	Query End:1099	Subject Strand: NEGATIVE	Subject Start: 219	Subject End: 285
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatat.............................................................................
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttaagccctgccatcatttcgatggcagggctttttaatatttggcacactgacttcttatctatat.............................................................................
HSP  2	e-value: 2.0E-13	bit: 79.8	Len: 52	Query Start:1113	Query End:1164	Subject Strand: NEGATIVE	Subject Start: 1	Subject End: 52
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttga............
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagttgacatctacaaggtttaatgtttgaatacatttaaaaatatatttga............

Subject: NC_002946_NGO2126_NGO2127|50S ribosomal protein L31:CadD|POSITIVE:POSITIVE|[2109174,2109424]|251
HSP  1	e-value: 6.0E-20	bit: 101.0	Len: 67	Query Start:1033	Query End:1099	Subject Strand: POSITIVE	Subject Start: 18	Subject End: 84
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatat.............................................................................
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttaagccctgccatcatttcgatggcagggctttttaatatttggcacactgacttcttatctatat.............................................................................
HSP  2	e-value: 8.0E-16	bit: 87.7	Len: 52	Query Start:1113	Query End:1164	Subject Strand: POSITIVE	Subject Start: 200	Subject End: 251
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttga............
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagttgacatctacaaagtttaatgtttgaatacattaaaaaatatatttga............

Subject: NC_003116_NMA0495_NMA0496|50S ribosomal protein L31:cadmium resistance protein|POSITIVE:POSITIVE|[477858,478159]|302
HSP  1	e-value: 1.0E-17	bit: 93.7	Len: 67	Query Start:1033	Query End:1099	Subject Strand: POSITIVE	Subject Start: 18	Subject End: 84
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttaagccctgctgtcatttcgatggcagggctttttaatatttggtacactaacttcttatctatat.............................................................................
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttaagccctgccatcatttcgatggcagggctttttaatatttggcatactgacttcttatctatat.............................................................................
HSP  2	e-value: 8.0E-16	bit: 87.7	Len: 52	Query Start:1113	Query End:1164	Subject Strand: POSITIVE	Subject Start: 251	Subject End: 302
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagttgacatctacaaagtttaatgttagaatacattcaaaaatatatttga............
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagttgacatctacaaagtttaatgtttgaatacattaaaaaatatatttga............


Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
GGGUUUCAGUACACGUCAAUAGAUGUCAAAAUAUUGAUUUUAAGCGAUUUUUGAUUUUUGGAAACUCAUUAUAUCACACUACAAAUCAAUAAAAACUCUACCUUUUUUAGAUAAAUAUAUCAUCUGGAUAUUGAAGUUUAAGCCCUGCUGUCAUUUCGAUGGCAGGGCUUUUUAAUAUUUGGUACACUAACUUCUUAUCUAUAUUUUGGUAGAUUUUAAGUUGACAUCUACAAAGUUUAAUGUUAGAAUACAUUCAAAAAUAUAUUUGAAUGAGGUAUUUU
.......(((((.......((((((((((..(((((((((...(.(((...((((....(....)..)))).))).).....))))))))).(((.((((((.....(((((((.........(..(((((((((....(((((((((((((.....))))))))))))))))))))))..)............)))))))......)))))).)))...))))))))))....................((((((((......))))))))..))))).. (-74.30)

Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
AAAAUACCUCAUUCAAAUAUAUUUUUGAAUGUAUUCUAACAUUAAACUUUGUAGAUGUCAACUUAAAAUCUACCAAAAUAUAGAUAAGAAGUUAGUGUACCAAAUAUUAAAAAGCCCUGCCAUCGAAAUGACAGCAGGGCUUAAACUUCAAUAUCCAGAUGAUAUAUUUAUCUAAAAAAGGUAGAGUUUUUAUUGAUUUGUAGUGUGAUAUAAUGAGUUUCCAAAAAUCAAAAAUCGCUUAAAAUCAAUAUUUUGACAUCUAUUGACGUGUACUGAAACCC
.........((((((((......))))))))..(((..((((........(((((((((((.......((((((........((((.(((((((((((.....))))))..(((((((((..((.....))..)))))))))..)))))..)))).((((((.....))))))......)))))).....(((((((((.....(((((....(((...........)))...)))))...)))))))))..)))))))))))....))))...))).... (-69.80)

Find mRNA Target Using  Conserved IGS================================================
5'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
311	168	124	218	178	smit:SMT_1810|5end_hypothetical_protein_1785219..1785449_POSITIVE
308	168	124	196	156	smit:SMT_1488|5end_K06147_ATP-binding_cassette,_subfamily_B,_bacterial_1467157..1467387_POSITIVE
308	170	134	71	35	smit:SMT_1453|5end_K07335_basic_membrane_protein_A_and_related_proteins_1437407..1437637_NEGATIVE
305	171	137	49	6	smit:SMT_1530|5end_K07456_DNA_mismatch_repair_protein_MutS2_1515346..1515576_NEGATIVE
302	187	142	147	92	smit:SMT_320|5end_alcohol_dehydrogenase,_zinc-containing_259492..259722_NEGATIVE
293	191	153	67	24	smit:SMT_413|5end_tRNA_delta(2)-isopentenylpyrophosphate_transferase_356677..356907_POSITIVE
292	187	142	170	121	smit:SMT_370|5end_acetyltransferase,_GNAT_family_304688..304918_POSITIVE
288	186	144	222	171	smit:SMT_131|5end_phosphatase,_putative_83663..83893_NEGATIVE
286	172	136	69	26	smit:SMT_414|5end_K03665_GTP-binding_protein_HflX_357554..357784_POSITIVE
283	168	124	184	144	smit:SMT_1602|5end_hypothetical_protein_1592385..1592615_POSITIVE
283	168	124	209	169	smit:SMT_833|5end_hypothetical_protein_predicted_by_Glimmer/Critica_775362..775592_NEGATIVE
283	168	124	193	153	smit:SMT_130|5end_capsular_polysaccharide_biosynthesis_protein_80995..81225_POSITIVE
276	170	127	172	123	smit:SMT_1292|5end_K02050_sulfonate/nitrate/taurine_transport_system_permease_protein_1254179..1254409_POSITIVE
275	167	124	180	141	smit:SMT_1782|5end_hypothetical_protein_1759520..1759750_POSITIVE
273	168	121	80	19	smit:SMT_2164|5end_K06147_ATP-binding_cassette,_subfamily_B,_bacterial_2037861..2038091_POSITIVE
270	170	123	48	6	smit:SMT_564|5end_23S_rRNA_Gm2251_methyltransferase_482717..482947_NEGATIVE
268	170	121	218	170	smit:SMT_1667|5end_hypothetical_protein_predicted_by_Glimmer/Critica_1657567..1657797_NEGATIVE
268	170	125	45	6	smit:SMT_1374|5end_uridylate_kinase_1353020..1353250_NEGATIVE
268	171	136	102	56	smit:SMT_103|5end_adenylosuccinate_synthetase_40766..40996_POSITIVE
265	199	155	174	132	smit:SMT_982|5end_D-tyrosyl-tRNA(Tyr)_deacylase_929654..929884_NEGATIVE

3'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
311	168	124	53	13	smit:SMT_1809|3end_MutT/NUDIX_family_protein_1785134..1785284_POSITIVE
311	168	124	54	14	smit:SMT_1477|3end_K02077_zinc/manganese_transport_system_substrate-binding_protein_1459447..1459597_NEGATIVE
311	172	133	75	32	smit:SMT_1291|3end_hypothetical_protein_1254296..1254446_POSITIVE
311	168	124	53	13	smit:SMT_1140|3end_glycogen_phosphorylase_1081316..1081466_NEGATIVE
295	168	124	53	13	smit:SMT_2109|3end_hypothetical_protein_predicted_by_Glimmer/Critica_1999061..1999211_NEGATIVE
295	168	124	53	13	smit:SMT_1180|3end_putative_tagatose-6-phosphate_aldose/ketose_isomerase_1138036..1138186_NEGATIVE
295	167	121	121	73	smit:SMT_240|3end_glutamate_synthase_small_subunit,_putative_178200..178350_POSITIVE
286	172	136	76	33	smit:SMT_413|3end_tRNA_delta(2)-isopentenylpyrophosphate_transferase_357641..357791_POSITIVE
283	168	124	54	14	smit:SMT_834|3end_hypothetical_protein_775517..775667_NEGATIVE
283	168	124	53	13	smit:SMT_698|3end_uracil_permease_609769..609919_POSITIVE
277	167	124	50	11	smit:SMT_799|3end_hypothetical_protein_707296..707446_NEGATIVE
273	170	121	146	88	smit:SMT_326|3end_K02029_polar_amino_acid_transport_system_permease_protein_263217..263367_NEGATIVE
271	159	123	143	101	smit:SMT_1454|3end_cytidine_deaminase_1437497..1437647_NEGATIVE
265	199	155	144	102	smit:SMT_983|3end_GTP_pyrophosphokinase_929684..929834_NEGATIVE
264	190	141	75	29	smit:SMT_1997|3end_K03294_basic_amino_acid/polyamine_antiporter,_APA_family_1921123..1921273_NEGATIVE
264	168	141	35	5	smit:SMT_1487|3end_hypothetical_protein_1467076..1467226_POSITIVE
263	184	141	85	28	smit:SMT_1941|3end_hypothetical_protein_1877663..1877813_POSITIVE
257	165	123	62	19	smit:SMT_199|3end_K07166_ACT_domain-containing_protein_129817..129967_POSITIVE
256	170	121	62	11	smit:SMT_1580|3end_MutT/NUDIX_family_protein_1573153..1573303_POSITIVE
253	170	122	58	1	smit:SMT_753|3end_chorismate_synthase_656801..656951_NEGATIVE