Origin IGS: ttgacacaaaaaaccgcatttcaagaagatctgcggttttaaatttcaatttttaaactatctatcccaaaagtctaaaacatttaaagcttttagcttctccatttattttcgattcgaaataaaaaacttatcaataaatagcaagtgaaataaggcaagtgtaattcccgataagcacccatgataagagatttcttgatgggtaagggggtaaagattactattacccgccaagaggcatgttaaaataacaaatagaatccaaaataaatccgtccatttatattttgaaaaatattttttccacataagaacaccttctttcctataatcatattataatactttatgtaagcgaacacaagaaatttgaggtaatttttaagtagatttcgaggcttaaaggttgtaaaaccagcattttaagcgttcaatgtgtctatgatttctctctttttaattcaagattgactcaaatccacagcattcaaaaaaagcgaatttcaatcgaaattcgctttataggaaagtgtattagtataaatcttgtatcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 tactcttcgaaaatcaaattcaaaccacgtcagcgttgccttgccgtactcaagtacagcctgcggctagcttcctagtttgctctttgattttcattgagtataagatacaagatttatactaatacactttcctataaagcgaatttcgattgaaattcgctttttttgaatgctgtggatttgagtcaatcttgaattaaaaagagagaaatcatagacacattgaacgcttaaaatgctggttttacaacctttaagcctcgaaatctacttaaaaattacctcaaatttcttgtgttcgcttacataaagtattataatatgattataggaaagaaggtgttcttatgtggaaaaaatatttttcaaaatataaatggacggatttattttggattctatttgttattttaacatgcctcttggcgggtaatagtaatctttacccccttacccatcaagaaatctcttatcatgggtgcttatcgggaattacacttgccttatttcacttgctatttattgataagttttttatttcgaatcgaaaataaatggagaagctaaaagctttaaatgttttagacttttgggatagatagtttaaaaattgaaatttaaaaccgcagatcttcttgaaatgcggttttttgtgtcaa Mask Tandem Repeat Region ================================================ ttgacacaaaaaaccgcatttcaagaagatctgcggttttaaatttcaatttttaaactatctatcccaaaagtctaaaacatttaaagcttttagcttctccatttattttcgattcgaaataaaaaacttatcaataaatagcaagtgaaataaggcaagtgtaattcccgataagcacccatgataagagatttcttgatgggtaagggggtaaagattactattacccgccaagaggcatgttaaaataacaaatagaatccaaaataaatccgtccatttatattttgaaaaatattttttccacataagaacaccttctttcctataatcatattataatactttatgtaagcgaacacaagaaatttgaggtaatttttaagtagatttcgaggcttaaaggttgtaaaaccagcattttaagcgttcaatgtgtctatgatttctctctttttaattcaagattgactcaaatccacagcattcaaaaaaagcgaatttcaatcgaaattcgctttataggaaagtgtattagtataaatcttgtatcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta Find is-nt database================================================ Query_seq: SMT_1139:SMT_1140|SMT_1139:SMT_1140:rRNA (guanine-N1-)-methyltransferase:glycogen phosphorylase:-><-:1080744..1081405 662 ttgacacaaaaaaccgcatttcaagaagatctgcggttttaaatttcaatttttaaactatctatcccaaaagtctaaaacatttaaagcttttagcttctccatttattttcgattcgaaataaaaaacttatcaataaatagcaagtgaaataaggcaagtgtaattcccgataagcacccatgataagagatttcttgatgggtaagggggtaaagattactattacccgccaagaggcatgttaaaataacaaatagaatccaaaataaatccgtccatttatattttgaaaaatattttttccacataagaacaccttctttcctataatcatattataatactttatgtaagcgaacacaagaaatttgaggtaatttttaagtagatttcgaggcttaaaggttgtaaaaccagcattttaagcgttcaatgtgtctatgatttctctctttttaattcaagattgactcaaatccacagcattcaaaaaaagcgaatttcaatcgaaattcgctttataggaaagtgtattagtataaatcttgtatcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: SMT_1139:SMT_1140|SMT_1139:SMT_1140:rRNA (guanine-N1-)-methyltransferase:glycogen phosphorylase:-><-:1080744..1081405 662 ttgacacaaaaaaccgcatttcaagaagatctgcggttttaaatttcaatttttaaactatctatcccaaaagtctaaaacatttaaagcttttagcttctccatttattttcgattcgaaataaaaaacttatcaataaatagcaagtgaaataaggcaagtgtaattcccgataagcacccatgataagagatttcttgatgggtaagggggtaaagattactattacccgccaagaggcatgttaaaataacaaatagaatccaaaataaatccgtccatttatattttgaaaaatattttttccacataagaacaccttctttcctataatcatattataatactttatgtaagcgaacacaagaaatttgaggtaatttttaagtagatttcgaggcttaaaggttgtaaaaccagcattttaagcgttcaatgtgtctatgatttctctctttttaattcaagattgactcaaatccacagcattcaaaaaaagcgaatttcaatcgaaattcgctttataggaaagtgtattagtataaatcttgtatcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: SMT_1139:SMT_1140|SMT_1139:SMT_1140:rRNA (guanine-N1-)-methyltransferase:glycogen phosphorylase:-><-:1080744..1081405 662 ttgacacaaaaaaccgcatttcaagaagatctgcggttttaaatttcaatttttaaactatctatcccaaaagtctaaaacatttaaagcttttagcttctccatttattttcgattcgaaataaaaaacttatcaataaatagcaagtgaaataaggcaagtgtaattcccgataagcacccatgataagagatttcttgatgggtaagggggtaaagattactattacccgccaagaggcatgttaaaataacaaatagaatccaaaataaatccgtccatttatattttgaaaaatattttttccacataagaacaccttctttcctataatcatattataatactttatgtaagcgaacacaagaaatttgaggtaatttttaagtagatttcgaggcttaaaggttgtaaaaccagcattttaagcgttcaatgtgtctatgatttctctctttttaattcaagattgactcaaatccacagcattcaaaaaaagcgaatttcaatcgaaattcgctttataggaaagtgtattagtataaatcttgtatcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 1 Min: 109 Max: 312 Len: 204 Subject: UniRef90_Q97ND9 Cluster: Hypothetical protein; n=3; Streptococcus pneumoniae|Rep: Hypothetical protein - Streptococcus pneumoniae HSP 1 e-value: 1.0E-22 bit: 108.0 Len: 204 Query Start:109 Query End:312 Subject Strand: null Subject Start: 1 Subject End: 68 ............................................................................................................ M W K K Y F S K Y K W T D L F W I L F V I L T C L L A G N S N L Y P L T H Q E I S Y H G C L S G I T L A L F H L L F I D K F F I S N R K .............................................................................................................................................................................................................................................................................................................................................................. ............................................................................................................ M L K K Y F S K Y K W T D L F W I L F V I L T C L Y I G N H D L F T L N H Q E F S F R G S V W G L V L A L Y H L L F I D K F V I S N R K .............................................................................................................................................................................................................................................................................................................................................................. ttgacacaaaaaaccgcatttcaagaagatctgcggttttaaatttcaatttttaaactatctatcccaaaagtctaaaacatttaaagcttttagcttctccatttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaacaccttctttcctataatcatattataatactttatgtaagcgaacacaagaaatttgaggtaatttttaagtagatttcgaggcttaaaggttgtaaaaccagcattttaagcgttcaatgtgtctatgatttctctctttttaattcaagattgactcaaatccacagcattcaaaaaaagcgaatttcaatcgaaattcgctttataggaaagtgtattagtataaatcttgtatcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta Predict ORF larger than 30AA ================================================ Protein_Len: 40 Strand: + Start: 29 End: 148 ............................ M C G F K F Q F L N Y L S Q K S K T F K A F S F S I Y F R F E I K N L S I N S K .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 58 Strand: + Start: 393 End: 566 ........................................................................................................................................................................................................................................................................................................................................................................................................ M S R L K G C K T S I L S V Q C V Y D F S L F N S R L T Q I H S I Q K K R I S I E I R F I G K C I S I N L V S Y T Q ................................................................................................ Protein_Len: 35 Strand: - Start: 541 End: 645 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Y L D Q I K Y E I F I L S C V L F S A A P Q V Q T R C P L A S T T Q M ................. Protein_Len: 39 Strand: - Start: 249 End: 365 ........................................................................................................................................................................................................................................................ F L L Y F G F Y I R G N I N Q F I N K G C L F V K K G I I M N Y Y K I Y A F M ......................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 109 End: 312 ............................................................................................................ D I F L L H F L A L T I G S L C G H Y S I E Q H T L P Y L N S N G A L L C T L I V F L I W F L D T W K Y K S F Y K K W M .............................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 44 Strand: - Start: 96 End: 227 ............................................................................................... S R W K N E I R F L F S I L L Y C T F Y P L H L E R Y A G M I L S K K I P L P T F I V M ................................................................................................................................................................................................................................................................................................................................................................................................................................................... ttgacacaaaaaaccgcatttcaagaagatctgcggttttaaatttcaatttttaaactatctatcccaaaagtctaaaacatttaaagcttttagcttctccatttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaacaccttctttcctataatcatattataatactttatgtaagcgaacacaagaaatttgaggtaatttttaagtagatttcgaggcttaaaggttgtaaaaccagcattttaagcgttcaatgtgtctatgatttctctctttttaattcaagattgactcaaatccacagcattcaaaaaaagcgaatttcaatcgaaattcgctttataggaaagtgtattagtataaatcttgtatcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: - Score: 81 Start: 339 End: 368 ..................................................................................................................................................................................................................................................................................................................................................CTTGTGTTCGCTTACATAAAGTATTATAAT...................................................................................................................................................................................................................................................................................................... Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ ttgacacaaaaaaccgcatttcaagaagatctgcggttttaaatttcaatttttaaactatctatcccaaaagtctaaaacatttaaagcttttagcttctccatttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaacaccttctttcctataatcatattataatactttatgtaagcgaacacaagaaatttgaggtaatttttaagtagatttcgaggcttaaaggttgtaaaaccagcattttaagcgttcaatgtgtctatgatttctctctttttaattcaagattgactcaaatccacagcattcaaaaaaagcgaatttcaatcgaaattcgctttataggaaagtgtattagtataaatcttgtatcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta Predict TransTerm conf > 70================================================ TransTerm Strand: + Conf: 100 HP_score: -11.7 Tail_Score: -3.86524 Start: 500 End: 521 Full_Region: CAGCATTCAAAAAAA GCGAATTTC AATC GAAATTCGC TTTATAGGAAAGTGT ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAATTTCAATCGAAATTCGC............................................................................................................................................. TransTerm Strand: - Conf: 100 HP_score: -11.7 Tail_Score: -5.48825 Start: 500 End: 521 Full_Region: acactttcctataaa gcgaatttc gatt gaaattcgc tttttttgaatgctg ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gcgaatttcgattgaaattcgc............................................................................................................................................. Find igs database================================================ Query_seq: SMT_1139:SMT_1140|SMT_1139:SMT_1140:rRNA (guanine-N1-)-methyltransferase:glycogen phosphorylase:-><-:1080744..1081405 662 ttgacacaaaaaaccgcatttcaagaagatctgcggttttaaatttcaatttttaaactatctatcccaaaagtctaaaacatttaaagcttttagcttctccatttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagaacaccttctttcctataatcatattataatactttatgtaagcgaacacaagaaatttgaggtaatttttaagtagatttcgaggcttaaaggttgtaaaaccagcattttaagcgttcaatgtgtctatgatttctctctttttaattcaagattgactcaaatccacagcattcaaaaaaagcgaatttcaatcgaaattcgctttataggaaagtgtattagtataaatcttgtatcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta Intra-Species Hit: Count: 38 Min: 1 Max: 662 Len: 662 Subject: smit_SMT_1139_SMT_1140|rRNA (guanine-N1-)-methyltransferase:glycogen phosphorylase|POSITIVE:NEGATIVE|[1080744,1081405]|662 HSP 1 e-value: 0.0 bit: 652.0 Len: 350 Query Start:313 Query End:662 Subject Strand: POSITIVE Subject Start: 313 Subject End: 662 ........................................................................................................................................................................................................................................................................................................................aagaacaccttctttcctataatcatattataatactttatgtaagcgaacacaagaaatttgaggtaatttttaagtagatttcgaggcttaaaggttgtaaaaccagcattttaagcgttcaatgtgtctatgatttctctctttttaattcaagattgactcaaatccacagcattcnnnnnnngcgaatttcaatcgaaattcgctttataggaaagtgtattagtataaatcttgtatcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ........................................................................................................................................................................................................................................................................................................................aagaacaccttctttcctataatcatattataatactttatgtaagcgaacacaagaaatttgaggtaatttttaagtagatttcgaggcttaaaggttgtaaaaccagcattttaagcgttcaatgtgtctatgatttctctctttttaattcaagattgactcaaatccacagcattcaaaaaaagcgaatttcaatcgaaattcgctttataggaaagtgtattagtataaatcttgtatcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta HSP 2 e-value: 3.0E-54 bit: 214.0 Len: 108 Query Start:1 Query End:108 Subject Strand: POSITIVE Subject Start: 1 Subject End: 108 ttgacacaaaaaaccgcatttcaagaagatctgcggttttaaatttcaatttttaaactatctatcccaaaagtctaaaacatttaaagcttttagcttctccattta.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ttgacacaaaaaaccgcatttcaagaagatctgcggttttaaatttcaatttttaaactatctatcccaaaagtctaaaacatttaaagcttttagcttctccattta.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: smit_SMT_1963_SMT_1964|ribonuclease BN, putative:sodium/hydrogen exchanger family protein|NEGATIVE:NEGATIVE|[1896553,1896685]|133 HSP 1 e-value: 7.0E-49 bit: 196.0 Len: 109 Query Start:554 Query End:662 Subject Strand: POSITIVE Subject Start: 21 Subject End: 129 .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atcttatactcmatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_482_SMT_483|hypothetical protein predicted by Glimmer/Critica:transcriptional activator TipA, putative|NEGATIVE:POSITIVE|[418627,418966]|340 HSP 1 e-value: 7.0E-49 bit: 196.0 Len: 107 Query Start:556 Query End:662 Subject Strand: NEGATIVE Subject Start: 225 Subject End: 331 ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1809_SMT_1810|MutT/NUDIX family protein:hypothetical protein|POSITIVE:POSITIVE|[1785195,1785358]|164 HSP 1 e-value: 3.0E-48 bit: 194.0 Len: 106 Query Start:557 Query End:662 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 106 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1068_SMT_1069|ATP-dependent DNA helicase RecG:acetyl xylan esterase, putative|POSITIVE:POSITIVE|[1009047,1009469]|423 HSP 1 e-value: 1.0E-47 bit: 192.0 Len: 109 Query Start:554 Query End:662 Subject Strand: POSITIVE Subject Start: 16 Subject End: 124 .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1534_SMT_1535|signal peptidase I:exodeoxyribonuclease V alpha chain|POSITIVE:POSITIVE|[1517973,1518206]|234 HSP 1 e-value: 7.0E-46 bit: 186.0 Len: 106 Query Start:557 Query End:662 Subject Strand: POSITIVE Subject Start: 97 Subject End: 202 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcgaaactgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1393_SMT_1394|hypothetical protein:hypothetical protein predicted by Glimmer/Critica|POSITIVE:POSITIVE|[1369621,1370215]|595 HSP 1 e-value: 7.0E-46 bit: 186.0 Len: 106 Query Start:557 Query End:662 Subject Strand: NEGATIVE Subject Start: 153 Subject End: 258 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1138_SMT_1139|hypothetical protein:rRNA (guanine-N1-)- methyltransferase|NEGATIVE:POSITIVE|[1079638, 1079894]|257 HSP 1 e-value: 7.0E-46 bit: 186.0 Len: 106 Query Start:557 Query End:662 Subject Strand: POSITIVE Subject Start: 73 Subject End: 178 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_662_SMT_663|A/G-specific adenine glycosylase:phosphate acetyltransferase|NEGATIVE:NEGATIVE|[573918,574105]|188 HSP 1 e-value: 7.0E-46 bit: 186.0 Len: 106 Query Start:557 Query End:662 Subject Strand: NEGATIVE Subject Start: 50 Subject End: 155 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_2133_SMT_2134|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[2014098,2014211]|114 HSP 1 e-value: 1.0E-44 bit: 182.0 Len: 100 Query Start:563 Query End:662 Subject Strand: NEGATIVE Subject Start: 15 Subject End: 114 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_2108_SMT_2109|adenylosuccinate lyase:hypothetical protein predicted by Glimmer/Critica|NEGATIVE:NEGATIVE|[1998942,1999150]|209 HSP 1 e-value: 1.0E-44 bit: 182.0 Len: 108 Query Start:555 Query End:662 Subject Strand: POSITIVE Subject Start: 102 Subject End: 209 ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tcttatactcaatgaaaatcaaagagcaaactagaaagctagccacaggctgtacttgagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1601_SMT_1602|hypothetical protein predicted by Glimmer/Critica:hypothetical protein|POSITIVE:POSITIVE|[1592204,1592524]|321 HSP 1 e-value: 1.0E-44 bit: 182.0 Len: 104 Query Start:559 Query End:662 Subject Strand: NEGATIVE Subject Start: 192 Subject End: 295 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1179_SMT_1180|aldose 1-epimerase:putative tagatose-6-phosphate aldose/ketose isomerase|NEGATIVE:NEGATIVE|[1137945,1138125]|181 HSP 1 e-value: 1.0E-44 bit: 182.0 Len: 108 Query Start:555 Query End:662 Subject Strand: POSITIVE Subject Start: 74 Subject End: 181 ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tcttatactcaatgaaaatcaaagagcaaactagaaagctagccacaggctgtacttgagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_872_SMT_873|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[820709,820822]|114 HSP 1 e-value: 1.0E-44 bit: 182.0 Len: 100 Query Start:563 Query End:662 Subject Strand: NEGATIVE Subject Start: 15 Subject End: 114 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_384_SMT_385|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[319921,320034]|114 HSP 1 e-value: 1.0E-44 bit: 182.0 Len: 100 Query Start:563 Query End:662 Subject Strand: POSITIVE Subject Start: 1 Subject End: 100 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1670_SMT_1671|K02030 polar amino acid transport system substrate-binding protein:hypothetical protein|POSITIVE:NEGATIVE|[1659356,1659481]|126 HSP 1 e-value: 4.0E-44 bit: 180.0 Len: 103 Query Start:560 Query End:662 Subject Strand: POSITIVE Subject Start: 1 Subject End: 103 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_826_SMT_827|hypothetical protein:hypothetical protein|NEGATIVE:POSITIVE|[750113,750528]|416 HSP 1 e-value: 4.0E-44 bit: 180.0 Len: 107 Query Start:556 Query End:662 Subject Strand: NEGATIVE Subject Start: 106 Subject End: 212 ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggttgtactggagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_890_SMT_891|K02029 polar amino acid transport system permease protein:oxidoreductase, putative|POSITIVE:POSITIVE|[837753,837989]|237 HSP 1 e-value: 2.0E-43 bit: 178.0 Len: 106 Query Start:557 Query End:662 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 106 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagacgcaggctgtacttgagtacggcaaggtgaagctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_259_SMT_260|dipeptide/tripeptide permease:phage transcriptional repressor|POSITIVE:POSITIVE|[199242,199609]|368 HSP 1 e-value: 2.0E-43 bit: 178.0 Len: 106 Query Start:557 Query End:662 Subject Strand: NEGATIVE Subject Start: 105 Subject End: 210 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgcggtttgaatttgattttcgaagagta Subject: smit_SMT_698_SMT_699|uracil permease:K03106 signal recognition particle, subunit SRP54|POSITIVE:NEGATIVE|[609830,610030]|201 HSP 1 e-value: 3.0E-42 bit: 174.0 Len: 104 Query Start:559 Query End:662 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 104 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagaacaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_129_SMT_130|putative glycosyltransferase:capsular polysaccharide biosynthesis protein|POSITIVE:POSITIVE|[80944,81134]|191 HSP 1 e-value: 3.0E-42 bit: 174.0 Len: 104 Query Start:557 Query End:660 Subject Strand: NEGATIVE Subject Start: 55 Subject End: 158 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagag.. ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgcggtttgaatttgattttcgaagag.. Subject: smit_SMT_1766_SMT_1767|sucrose-6-phosphate hydrolase:oxidoreductase, short chain dehydrogenase/reductase family|POSITIVE:NEGATIVE|[1743162,1743332]|171 HSP 1 e-value: 1.0E-41 bit: 172.0 Len: 107 Query Start:556 Query End:662 Subject Strand: NEGATIVE Subject Start: 8 Subject End: 114 ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagtcgcaagctgtacttgagtacggtgaggcgacgctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1476_SMT_1477|thiol peroxidase:K02077 zinc/manganese transport system substrate-binding protein|NEGATIVE:NEGATIVE|[1459310,1459536]|227 HSP 1 e-value: 1.0E-41 bit: 172.0 Len: 107 Query Start:556 Query End:662 Subject Strand: POSITIVE Subject Start: 122 Subject End: 227 ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccacaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta Subject: smit_SMT_1781_SMT_1782|transcriptional regulator, xre family:hypothetical protein|POSITIVE:POSITIVE|[1759357,1759659]|303 HSP 1 e-value: 6.0E-40 bit: 167.0 Len: 104 Query Start:559 Query End:662 Subject Strand: NEGATIVE Subject Start: 177 Subject End: 280 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgaaggctgtacttgagtacggcaaggtgaagctgacgtagtttgaatttgattttcgaagagta Subject: smit_SMT_442_SMT_443|transcriptional regulator, putative:hydroxyethylthiazole kinase|POSITIVE:POSITIVE|[382461,382694]|234 HSP 1 e-value: 6.0E-40 bit: 167.0 Len: 104 Query Start:557 Query End:660 Subject Strand: NEGATIVE Subject Start: 39 Subject End: 142 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagag.. ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatgctcaatgaaaatcaaagagcaaactaggaagctagccgtaggctgtacttgagtacggcaaggtgaagctgacgtggtttgaatttgattttcgaagag.. Subject: smit_SMT_1487_SMT_1488|hypothetical protein:K06147 ATP-binding cassette, subfamily B, bacterial|POSITIVE:POSITIVE|[1467137,1467296]|160 HSP 1 e-value: 2.0E-37 bit: 159.0 Len: 104 Query Start:559 Query End:662 Subject Strand: NEGATIVE Subject Start: 19 Subject End: 122 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtactcgagtacggcaaggcgacgttgacgcagtttgaatttgattttcgaagagta Subject: smit_SMT_833_SMT_834|hypothetical protein predicted by Glimmer/Critica:hypothetical protein|NEGATIVE:NEGATIVE|[775453,775606]|154 HSP 1 e-value: 2.0E-36 bit: 155.0 Len: 106 Query Start:557 Query End:662 Subject Strand: POSITIVE Subject Start: 50 Subject End: 154 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaa-gagattttcgaagagta Subject: smit_SMT_798_SMT_799|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[707167,707385]|219 HSP 1 e-value: 2.0E-36 bit: 155.0 Len: 106 Query Start:557 Query End:662 Subject Strand: POSITIVE Subject Start: 112 Subject End: 216 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggtgaagctgacgtggtttgaa-gagattttcgaagagta Subject: smit_SMT_915_SMT_916|sucrose operon repressor:3-hydroxy-3-methylglutaryl-CoA reductase|POSITIVE:NEGATIVE|[868680,868819]|140 HSP 1 e-value: 1.0E-34 bit: 149.0 Len: 107 Query Start:556 Query End:662 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 106 ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cttatactcaatgaaaatcaaagagcgaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagta Subject: smit_SMT_1535_SMT_1536|exodeoxyribonuclease V alpha chain:trigger factor|POSITIVE:NEGATIVE|[1520574,1520725]|152 HSP 1 e-value: 9.0E-33 bit: 143.0 Len: 104 Query Start:559 Query End:662 Subject Strand: POSITIVE Subject Start: 45 Subject End: 147 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccacaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagta Subject: smit_SMT_1849_SMT_1850|hypothetical protein:K01421 putative membrane protein|POSITIVE:POSITIVE|[1813865,1815201]|1337 HSP 1 e-value: 5.0E-28 bit: 127.0 Len: 104 Query Start:559 Query End:662 Subject Strand: POSITIVE Subject Start: 257 Subject End: 359 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagatcaaactaggaagctagccgtagtcagtacttgagtacggcaaggcgaagctgacgtggtttgaa-gagattttcgaagagta Subject: smit_SMT_1689_SMT_1690|PTS enzyme, maltose-and glucose-specific, factor II homologue:K06148 ATP-binding cassette, subfamily C, bacterial|POSITIVE:NEGATIVE|[1673200,1673459]|260 HSP 1 e-value: 1.0E-22 bit: 109.0 Len: 103 Query Start:560 Query End:662 Subject Strand: POSITIVE Subject Start: 1 Subject End: 102 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tactcaatgaaaatcaaagagcaaactgggaagctaggcgcaggctatacttgagtacgccaaggcgaagctggcatggtttgaa-gagattttcgaagagta Subject: smit_SMT_1814_SMT_1815|amino acid transporter:K02035 peptide/nickel transport system substrate-binding protein|POSITIVE:NEGATIVE|[1788701,1788988]|288 HSP 1 e-value: 3.0E-20 bit: 101.0 Len: 51 Query Start:556 Query End:606 Subject Strand: POSITIVE Subject Start: 65 Subject End: 115 ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctg........................................................ ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctg........................................................ HSP 2 e-value: 2.0E-6 bit: 56.0 Len: 48 Query Start:615 Query End:662 Subject Strand: POSITIVE Subject Start: 216 Subject End: 262 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggtaaggcaacgctgacgtggtttgaa-gagattttcgaagagta Subject: smit_SMT_365_SMT_366|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[301808,302224]|417 HSP 1 e-value: 5.0E-16 bit: 87.7 Len: 48 Query Start:559 Query End:606 Subject Strand: NEGATIVE Subject Start: 347 Subject End: 394 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctg........................................................ ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctggccgcaggctg........................................................ HSP 2 e-value: 7.0E-9 bit: 63.9 Len: 48 Query Start:615 Query End:662 Subject Strand: NEGATIVE Subject Start: 245 Subject End: 291 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaa-gagattttcgaagagta Subject: smit_SMT_217_SMT_218|hypothetical protein:undecaprenyl pyrophosphate synthetase|POSITIVE:POSITIVE|[149949,150294]|346 HSP 1 e-value: 3.0E-14 bit: 81.8 Len: 45 Query Start:559 Query End:603 Subject Strand: POSITIVE Subject Start: 158 Subject End: 202 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................... ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagaccaaactaggaagctagccgcagg........................................................... HSP 2 e-value: 4.0E-10 bit: 67.9 Len: 34 Query Start:629 Query End:662 Subject Strand: POSITIVE Subject Start: 237 Subject End: 270 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gctgacgtggtttgaatttgattttcgaagagta ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gctgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_1544_SMT_1545|mevalonate kinase:choline-binding protein|NEGATIVE:NEGATIVE|[1528975,1529249]|275 HSP 1 e-value: 1.0E-13 bit: 79.8 Len: 48 Query Start:615 Query End:662 Subject Strand: POSITIVE Subject Start: 136 Subject End: 183 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagta HSP 2 e-value: 2.0E-9 bit: 65.9 Len: 45 Query Start:559 Query End:603 Subject Strand: POSITIVE Subject Start: 33 Subject End: 77 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................... ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaaaagcaaactatgaagctacccgcagg........................................................... Subject: smit_SMT_1200_SMT_1201|K06148 ATP-binding cassette, subfamily C, bacterial:hypothetical protein predicted by Glimmer/Critica|NEGATIVE:NEGATIVE|[1163326,1163854]|529 HSP 1 e-value: 1.0E-13 bit: 79.8 Len: 48 Query Start:559 Query End:606 Subject Strand: POSITIVE Subject Start: 14 Subject End: 61 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctg........................................................ ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactagaaaactagccgcaggctg........................................................ HSP 2 e-value: 1.0E-13 bit: 79.8 Len: 48 Query Start:615 Query End:662 Subject Strand: POSITIVE Subject Start: 116 Subject End: 163 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagta Subject: smit_SMT_912_SMT_913|fructokinase:putative sucrose-specific PTS permease, enzyme II|NEGATIVE:NEGATIVE|[863711,864012]|302 HSP 1 e-value: 1.0E-13 bit: 79.8 Len: 40 Query Start:560 Query End:599 Subject Strand: POSITIVE Subject Start: 152 Subject End: 191 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccg............................................................... ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccg............................................................... HSP 2 e-value: 3.0E-11 bit: 71.9 Len: 48 Query Start:615 Query End:662 Subject Strand: POSITIVE Subject Start: 255 Subject End: 302 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggcaaggcgaagctgacatggtttgaatttgattttcgaagagta Inter-species Hit: Count: 30 Min: 316 Max: 662 Len: 347 Subject: NC_003028_SP_1180_SP_1181|ribonucleotide-diphosphate reductase beta subunit:hypothetical protein|POSITIVE:NEGATIVE|[1119540,1119753]|214 HSP 1 e-value: 3.0E-48 bit: 194.0 Len: 106 Query Start:557 Query End:662 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 106 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcgaagctgacgtggtttgaatttgattttcgaagagta Subject: NC_003028_SP_2183_SP_2184|hypothetical protein:glycerol uptake facilitator protein|NEGATIVE:NEGATIVE|[2101749,2102044]|296 HSP 1 e-value: 1.0E-44 bit: 182.0 Len: 104 Query Start:559 Query End:662 Subject Strand: POSITIVE Subject Start: 189 Subject End: 292 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaatttgattttcgaagagta Subject: NC_003028_SP_0280_SP_0281|ribosomal small subunit pseudouridine synthase A:aminopeptidase C|POSITIVE:POSITIVE|[258312,258528]|217 HSP 1 e-value: 1.0E-44 bit: 182.0 Len: 104 Query Start:559 Query End:662 Subject Strand: POSITIVE Subject Start: 10 Subject End: 113 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagta Subject: NC_003028_SP_0816_SP_0817|hypothetical protein:MutT/nudix family protein|NEGATIVE:NEGATIVE|[768501,768664]|164 HSP 1 e-value: 2.0E-43 bit: 178.0 Len: 106 Query Start:557 Query End:662 Subject Strand: POSITIVE Subject Start: 59 Subject End: 164 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctatacttgagtacggtaaggcgacgctgacgtggtttgaattttattttcgaagagta Subject: NC_003028_SP_1472_SP_1473|oxidoreductase, putative:hypothetical protein|POSITIVE:NEGATIVE|[1386055,1386276]|222 HSP 1 e-value: 6.0E-43 bit: 176.0 Len: 105 Query Start:558 Query End:662 Subject Strand: POSITIVE Subject Start: 115 Subject End: 219 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttaagtacggcaaggtgaagctgacgtggtttgaatttgattttcgaagagta Subject: NC_003028_SP_0096_SP_0097|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[98992,99168]|177 HSP 1 e-value: 1.0E-41 bit: 172.0 Len: 103 Query Start:560 Query End:662 Subject Strand: POSITIVE Subject Start: 69 Subject End: 171 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggtaaggcgaagctgacgtggtttgaatttgatttttgaagagta Subject: NC_008533_SPD_1551_SPD_1552|prevent-host-death family protein:hypothetical protein|NEGATIVE:NEGATIVE|[1574500,1574730]|231 HSP 1 e-value: 4.0E-41 bit: 170.0 Len: 106 Query Start:557 Query End:662 Subject Strand: POSITIVE Subject Start: 85 Subject End: 190 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgcgatttgaatttgattttcgaagagta Subject: NC_008533_SPD_0546_SPD_0547|branched-chain amino acid transport system II carrier protein:hypothetical protein|POSITIVE:POSITIVE|[559539,559741]|203 HSP 1 e-value: 4.0E-41 bit: 170.0 Len: 106 Query Start:557 Query End:662 Subject Strand: NEGATIVE Subject Start: 8 Subject End: 113 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacgacaaggcgacgttgacgcggtttgaatttgattttcgaagagta Subject: NC_003098_spr1586_spr1587|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1567002,1567199]|198 HSP 1 e-value: 4.0E-41 bit: 170.0 Len: 106 Query Start:557 Query End:662 Subject Strand: POSITIVE Subject Start: 52 Subject End: 157 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgcgatttgaatttgattttcgaagagta Subject: NC_003098_spr0551_spr0552|Branched-chain amino acid transport system carrier protein:hypothetical protein|POSITIVE:POSITIVE|[552009,552211]|203 HSP 1 e-value: 4.0E-41 bit: 170.0 Len: 106 Query Start:557 Query End:662 Subject Strand: NEGATIVE Subject Start: 8 Subject End: 113 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacgacaaggcgacgttgacgcggtttgaatttgattttcgaagagta Subject: NC_003028_SP_1741_SP_1742|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1645558,1645794]|237 HSP 1 e-value: 4.0E-41 bit: 170.0 Len: 106 Query Start:557 Query End:662 Subject Strand: POSITIVE Subject Start: 91 Subject End: 196 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgcgatttgaatttgattttcgaagagta Subject: NC_008533_SPD_0714_SPD_0715|hypothetical protein:MutT/nudix family protein|NEGATIVE:NEGATIVE|[729726,729889]|164 HSP 1 e-value: 1.0E-38 bit: 163.0 Len: 106 Query Start:557 Query End:662 Subject Strand: POSITIVE Subject Start: 59 Subject End: 164 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctatacttgagtacggtaaggcgacgcttacgtgatttgaattttattttcgaagagta Subject: NC_003098_spr0720_spr0721|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[722195,722358]|164 HSP 1 e-value: 1.0E-38 bit: 163.0 Len: 106 Query Start:557 Query End:662 Subject Strand: POSITIVE Subject Start: 59 Subject End: 164 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctatacttgagtacggtaaggcgacgcttacgtgatttgaattttattttcgaagagta Subject: NC_008533_SPD_1931_SPD_1932|hypothetical protein:maltodextrin phosphorylase|POSITIVE:NEGATIVE|[1902224,1903267]|1044 HSP 1 e-value: 4.0E-38 bit: 161.0 Len: 190 Query Start:414 Query End:603 Subject Strand: POSITIVE Subject Start: 791 Subject End: 977 .............................................................................................................................................................................................................................................................................................................................................................................................................................aaaaccagcattttaagcgttcaatgtgtctatgatttctctctttttaattcaagattgactcaaatccacagcattcnnnnnnngcgaatttcaatcgaaattcgctttataggaaagtgtattagtataaatcttgtatcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................... .............................................................................................................................................................................................................................................................................................................................................................................................................................aaaaccagcatttaaagccttcactgtatctaggatttccctatttttaga-caagattgacccaaatccacagcatt-taaaaaagcgaatttcaatcgaaactcgcttttttacaaaatgtattagtataaat-ttgtatcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................... HSP 2 e-value: 3.0E-17 bit: 91.7 Len: 66 Query Start:316 Query End:381 Subject Strand: POSITIVE Subject Start: 691 Subject End: 756 ...........................................................................................................................................................................................................................................................................................................................aacaccttctttcctataatcatattataatactttatgtaagcgaacacaagaaatttgaggtaa......................................................................................................................................................................................................................................................................................... ...........................................................................................................................................................................................................................................................................................................................aacaccttctttcctacaattatattataatactttatgtaagcgaatacaagagatatgaggtaa......................................................................................................................................................................................................................................................................................... Subject: NC_003098_spr1915_spr1916|hypothetical protein:Maltodextrin phosphorylase|POSITIVE:NEGATIVE|[1894692,1895735]|1044 HSP 1 e-value: 4.0E-38 bit: 161.0 Len: 190 Query Start:414 Query End:603 Subject Strand: POSITIVE Subject Start: 791 Subject End: 977 .............................................................................................................................................................................................................................................................................................................................................................................................................................aaaaccagcattttaagcgttcaatgtgtctatgatttctctctttttaattcaagattgactcaaatccacagcattcnnnnnnngcgaatttcaatcgaaattcgctttataggaaagtgtattagtataaatcttgtatcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................... .............................................................................................................................................................................................................................................................................................................................................................................................................................aaaaccagcatttaaagccttcactgtatctaggatttccctatttttaga-caagattgacccaaatccacagcatt-taaaaaagcgaatttcaatcgaaactcgcttttttacaaaatgtattagtataaat-ttgtatcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................... HSP 2 e-value: 3.0E-17 bit: 91.7 Len: 66 Query Start:316 Query End:381 Subject Strand: POSITIVE Subject Start: 691 Subject End: 756 ...........................................................................................................................................................................................................................................................................................................................aacaccttctttcctataatcatattataatactttatgtaagcgaacacaagaaatttgaggtaa......................................................................................................................................................................................................................................................................................... ...........................................................................................................................................................................................................................................................................................................................aacaccttctttcctacaattatattataatactttatgtaagcgaatacaagagatatgaggtaa......................................................................................................................................................................................................................................................................................... Subject: NC_008533_SPD_0260_SPD_0261|ribosomal small subunit pseudouridine synthase A:aminopeptidase C|POSITIVE:POSITIVE|[258814,259029]|216 HSP 1 e-value: 4.0E-35 bit: 151.0 Len: 104 Query Start:559 Query End:662 Subject Strand: POSITIVE Subject Start: 10 Subject End: 112 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctgtacttgagtacggcaaggcgacgttgacgtggtttgaa-gagattttcgaagagta Subject: NC_003028_SP_0292_SP_0293|bifunctional folate synthesis protein:hypothetical protein|POSITIVE:NEGATIVE|[271230,271378]|149 HSP 1 e-value: 1.0E-34 bit: 149.0 Len: 103 Query Start:560 Query End:662 Subject Strand: NEGATIVE Subject Start: 48 Subject End: 149 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tactcaatgaaaatcaaagagcaaactaggaagctagccgcaagctgtacttgagtacggtaaggcgacgctgacgtggtttgaa-gagattttcgaagagta Subject: NC_008533_SPD_0991_SPD_0992|ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[1002301,1002645]|345 HSP 1 e-value: 9.0E-33 bit: 143.0 Len: 104 Query Start:559 Query End:662 Subject Strand: NEGATIVE Subject Start: 146 Subject End: 249 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaattaaagtgcaaactaggaagttagccgcaggctgtacttgagtacggcaaggtgaaattgacgtggtttgaatttgattttcgaagagta Subject: NC_003098_spr1014_spr1015|50S ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[994770,995114]|345 HSP 1 e-value: 9.0E-33 bit: 143.0 Len: 104 Query Start:559 Query End:662 Subject Strand: NEGATIVE Subject Start: 146 Subject End: 249 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaattaaagtgcaaactaggaagttagccgcaggctgtacttgagtacggcaaggtgaaattgacgtggtttgaatttgattttcgaagagta Subject: NC_003028_SP_2105_SP_2106|hypothetical protein:glycogen phosphorylase family protein|POSITIVE:NEGATIVE|[2015357,2016398]|1042 HSP 1 e-value: 9.0E-33 bit: 143.0 Len: 189 Query Start:414 Query End:602 Subject Strand: POSITIVE Subject Start: 791 Subject End: 975 .............................................................................................................................................................................................................................................................................................................................................................................................................................aaaaccagcattttaagcgttcaatgtgtctatgatttctctctttttaattcaagattgactcaaatccacagcattcnnnnnnngcgaatttcaatcgaaattcgctttataggaaagtgtattagtataaatcttgtatcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcag............................................................ .............................................................................................................................................................................................................................................................................................................................................................................................................................aaaaccagcatttaaagccttcactgtatctaggatttccctatttttaga-caagattgacccaaatctacatcatt--aaaaaagcgaatttcaatcgaaactcgcttttttacaaaatgtattagtataaat-ttgtatcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcag............................................................ HSP 2 e-value: 4.0E-13 bit: 77.8 Len: 47 Query Start:316 Query End:362 Subject Strand: POSITIVE Subject Start: 691 Subject End: 737 ...........................................................................................................................................................................................................................................................................................................................aacaccttctttcctataatcatattataatactttatgtaagcgaa............................................................................................................................................................................................................................................................................................................ ...........................................................................................................................................................................................................................................................................................................................aacaccttctttcctacaattatattataatactttatgtaagcgaa............................................................................................................................................................................................................................................................................................................ Subject: NC_003028_SP_1107_SP_1108|50S ribosomal protein L27:hypothetical protein|POSITIVE:NEGATIVE|[1038201,1038545]|345 HSP 1 e-value: 2.0E-30 bit: 135.0 Len: 104 Query Start:559 Query End:662 Subject Strand: NEGATIVE Subject Start: 146 Subject End: 249 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaattaaagtgcaaactaggaagttagccgcaggctgtacttgagtacggcaaggtgaaattgacatggtttgaatttgattttcgaagagta Subject: NC_008533_SPD_0710_SPD_0711|septation ring formation regulator EzrA:hypothetical protein|POSITIVE:POSITIVE|[727105,727897]|793 HSP 1 e-value: 1.0E-25 bit: 119.0 Len: 104 Query Start:559 Query End:662 Subject Strand: NEGATIVE Subject Start: 136 Subject End: 238 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactaaatgaaaatcaaaaagcaaactaagaagctagcctcaggctgtacttgagtacggtaaggcgacgctgacgtgatttgaa-gagattttcgaagagta Subject: NC_003028_SP_0807_SP_0809|septation ring formation regulator EzrA:hypothetical protein|POSITIVE:POSITIVE|[764244,764778]|535 HSP 1 e-value: 1.0E-25 bit: 119.0 Len: 104 Query Start:559 Query End:662 Subject Strand: NEGATIVE Subject Start: 136 Subject End: 238 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactaaatgaaaatcaaaaagcaaactaagaagctagcctcaggctgtacttgagtacggtaaggcgacgctgacgtgatttgaa-aagattttcgaagagta Subject: NC_008533_SPD_1492_SPD_1493|hypothetical protein:sugar ABC transporter, permease protein|NEGATIVE:NEGATIVE|[1508518,1508789]|272 HSP 1 e-value: 1.0E-16 bit: 89.7 Len: 105 Query Start:558 Query End:662 Subject Strand: POSITIVE Subject Start: 168 Subject End: 272 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tatactcaatgaaaattgaagaacaaactaggaagctaaccgcaggcaatacttaagtatggcaaggtgaagctgacgtagtttgcattcgattttcgcagagta Subject: NC_008533_SPD_0089_SPD_0090|ABC transporter, permease protein:ABC transporter, substrate-binding protein|POSITIVE:POSITIVE|[89674,89930]|257 HSP 1 e-value: 1.0E-16 bit: 89.7 Len: 53 Query Start:554 Query End:606 Subject Strand: NEGATIVE Subject Start: 159 Subject End: 211 .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctg........................................................ .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atcttatactcaatgaaaatcaaagagcaaactagaaaactagccgcaggctg........................................................ HSP 2 e-value: 3.0E-11 bit: 71.9 Len: 48 Query Start:615 Query End:662 Subject Strand: NEGATIVE Subject Start: 55 Subject End: 102 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggcaaggcgacgttgacgcggtttgaatttgattttcgaagagta Subject: NC_003098_spr1524_spr1525|hypothetical protein:ABC transporter membrane-spanning permease - sugar transport|NEGATIVE:NEGATIVE|[1500987,1501258]|272 HSP 1 e-value: 1.0E-16 bit: 89.7 Len: 105 Query Start:558 Query End:662 Subject Strand: POSITIVE Subject Start: 168 Subject End: 272 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctgtacttgagtacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tatactcaatgaaaattgaagaacaaactaggaagctaaccgcaggcaatacttaagtatggcaaggtgaagctgacgtagtttgcattcgattttcgcagagta Subject: NC_008533_SPD_0047_SPD_0049|hypothetical protein:competence factor transporting ATP-binding/permease protein ComA|POSITIVE:POSITIVE|[39873,41901]|2029 HSP 1 e-value: 5.0E-16 bit: 87.7 Len: 48 Query Start:559 Query End:606 Subject Strand: NEGATIVE Subject Start: 1963 Subject End: 2010 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctg........................................................ ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgcaggctg........................................................ HSP 2 e-value: 1.0E-13 bit: 79.8 Len: 48 Query Start:615 Query End:662 Subject Strand: NEGATIVE Subject Start: 1861 Subject End: 1908 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagta Subject: NC_003028_SP_0091_SP_0092|ABC transporter, permease protein:ABC transporter, substrate-binding protein|POSITIVE:POSITIVE|[94866,95122]|257 HSP 1 e-value: 3.0E-14 bit: 81.8 Len: 53 Query Start:554 Query End:606 Subject Strand: NEGATIVE Subject Start: 159 Subject End: 211 .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctg........................................................ .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atcttatactcaataaaaatcaaagagcaaactagaaaactagccgcaggctg........................................................ HSP 2 e-value: 3.0E-11 bit: 71.9 Len: 48 Query Start:615 Query End:662 Subject Strand: NEGATIVE Subject Start: 55 Subject End: 102 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggcaaggcgacgttgacgcggtttgaatttgattttcgaagagta Subject: NC_003028_SP_0041_SP_0042|bacteriocin BlpU:competence factor transporting ATP-binding/permease protein ComA|POSITIVE:POSITIVE|[40102,40815]|714 HSP 1 e-value: 1.0E-13 bit: 79.8 Len: 48 Query Start:615 Query End:662 Subject Strand: NEGATIVE Subject Start: 546 Subject End: 593 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggcaaggcgacgttgacgtggtttgaatttgattttcgaagagta HSP 2 e-value: 1.0E-13 bit: 79.8 Len: 48 Query Start:559 Query End:606 Subject Strand: NEGATIVE Subject Start: 648 Subject End: 695 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaagctagccgcaggctg........................................................ ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atactcaatgaaaatcaaagagcaaactaggaaactagccgtaggctg........................................................ Subject: NC_003028_SP_1516_SP_1517|acetyltransferase, GNAT family:transcription elongation factor GreA|NEGATIVE:NEGATIVE|[1424331,1424807]|477 HSP 1 e-value: 2.0E-12 bit: 75.8 Len: 50 Query Start:554 Query End:603 Subject Strand: POSITIVE Subject Start: 86 Subject End: 135 .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atcttatactcaatgaaaatcaaagagcaaactaggaagctagccgcagg........................................................... .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atctaatactcaataaaaatcaaagagcaaactaggaaactagccgcagg........................................................... HSP 2 e-value: 2.0E-6 bit: 56.0 Len: 48 Query Start:615 Query End:662 Subject Strand: POSITIVE Subject Start: 374 Subject End: 420 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggcaaggcaacgctgacgtggtttgaatttgattttcgaagagta ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tacggcaaggcgacgctgacgtggtttgaa-gagattttcgaagagta Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AACACCUUCUUUCCUAUAAUCAUAUUAUAAUACUUUAUGUAAGCGAACACAAGAAAUUUGAGGUAAUUUUUAAGUAGAUUUCGAGGCUUAAAGGUUGUAAAACCAGCAUUUUAAGCGUUCAAUGUGUCUAUGAUUUCUCUCUUUUUAAUUCAAGAUUGACUCAAAUCCACAGCAUUCAAAAAAAGCGAAUUUCAAUCGAAAUUCGCUUUAUAGGAAAGUGUAUUAGUAUAAAUCUUGUAUCUUAUACUCAAUGAAAAUCAAAGAGCAAACUAGGAAGCUAGCCGCAGGCUGUACUUGAGUACGGCAAGGCAACGCUGACGUGGUUUGAAUUUGAUUUUCGAAGAGUA .((((....(((((((((..................((((....((((....((((((((...((.....))..))))))))...((((((((((((......)))).))))))))))))..((((..(.(((..((..((((........))))..)).))).)..)))))))).......(((((((((((....)))))))))))))))))))))))).......................(((((..(((((((((((...((((((((..(((..(((....(((((((....)))))))..)))...)))..).)))))))..)))))))))))..))))) (-95.70) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UACUCUUCGAAAAUCAAAUUCAAACCACGUCAGCGUUGCCUUGCCGUACUCAAGUACAGCCUGCGGCUAGCUUCCUAGUUUGCUCUUUGAUUUUCAUUGAGUAUAAGAUACAAGAUUUAUACUAAUACACUUUCCUAUAAAGCGAAUUUCGAUUGAAAUUCGCUUUUUUUGAAUGCUGUGGAUUUGAGUCAAUCUUGAAUUAAAAAGAGAGAAAUCAUAGACACAUUGAACGCUUAAAAUGCUGGUUUUACAACCUUUAAGCCUCGAAAUCUACUUAAAAAUUACCUCAAAUUUCUUGUGUUCGCUUACAUAAAGUAUUAUAAUAUGAUUAUAGGAAAGAAGGUGUU (((((...((((((((((..(((((...(..(((...(((..((.((((....)))).))....)))..)))..)..)))))...))))))))))...)))))....................(((((.(((((((((((.(((((((((....)))))))))........(((((.((((((((..(((..((((........))))((....))...))).........(((((((.....((((....)))))))))))....)))))))).....................((((((......)))))).))))).........)))))))))))...))))) (-87.00) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1048 310 261 218 169 smit:SMT_1810|5end_hypothetical_protein_1785219..1785449_POSITIVE 1017 310 261 184 135 smit:SMT_1602|5end_hypothetical_protein_1592385..1592615_POSITIVE 1017 310 261 196 147 smit:SMT_1488|5end_K06147_ATP-binding_cassette,_subfamily_B,_bacterial_1467157..1467387_POSITIVE 1017 310 261 209 160 smit:SMT_833|5end_hypothetical_protein_predicted_by_Glimmer/Critica_775362..775592_NEGATIVE 1017 310 261 193 144 smit:SMT_130|5end_capsular_polysaccharide_biosynthesis_protein_80995..81225_POSITIVE 983 309 261 231 183 smit:SMT_1138|5end_hypothetical_protein_1079547..1079777_NEGATIVE 971 310 261 183 134 smit:SMT_1963|5end_ribonuclease_BN,_putative_1896462..1896692_NEGATIVE 971 310 261 170 121 smit:SMT_483|5end_transcriptional_activator_TipA,_putative_418827..419057_POSITIVE 937 309 261 180 132 smit:SMT_1782|5end_hypothetical_protein_1759520..1759750_POSITIVE 887 306 261 231 186 smit:SMT_1179|5end_aldose_1-epimerase_1137854..1138084_NEGATIVE 808 288 244 216 172 smit:SMT_1379|5end_thymidylate_kinase_1357438..1357668_NEGATIVE 807 290 241 151 101 smit:SMT_1200|5end_K06148_ATP-binding_cassette,_subfamily_C,_bacterial_1163235..1163465_NEGATIVE 805 290 244 161 115 smit:SMT_366|5end_hypothetical_protein_302085..302315_POSITIVE 732 289 242 231 184 smit:SMT_443|5end_hydroxyethylthiazole_kinase_382555..382785_POSITIVE 725 340 296 45 1 smit:SMT_2109|5end_hypothetical_protein_predicted_by_Glimmer/Critica_1999099..1999329_NEGATIVE 714 288 244 191 148 smit:SMT_150|5end_K02030_polar_amino_acid_transport_system_substrate-binding_protein_98787..99017_POSITIVE 674 288 241 168 121 smit:SMT_1544|5end_mevalonate_kinase_1528884..1529114_NEGATIVE 673 288 244 156 112 smit:SMT_163|5end_cardiolipin_synthetase_107309..107539_POSITIVE 620 288 242 153 107 smit:SMT_775|5end_alpha-acetolactate_decarboxylase_685972..686202_NEGATIVE 573 278 240 231 193 smit:SMT_2108|5end_adenylosuccinate_lyase_1998851..1999081_NEGATIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1064 320 271 64 15 smit:SMT_1477|3end_K02077_zinc/manganese_transport_system_substrate-binding_protein_1459447..1459597_NEGATIVE 1048 310 261 53 4 smit:SMT_1809|3end_MutT/NUDIX_family_protein_1785134..1785284_POSITIVE 1017 310 261 54 5 smit:SMT_834|3end_hypothetical_protein_775517..775667_NEGATIVE 1014 309 261 50 2 smit:SMT_799|3end_hypothetical_protein_707296..707446_NEGATIVE 992 310 261 53 4 smit:SMT_2109|3end_hypothetical_protein_predicted_by_Glimmer/Critica_1999061..1999211_NEGATIVE 992 310 261 53 4 smit:SMT_1180|3end_putative_tagatose-6-phosphate_aldose/ketose_isomerase_1138036..1138186_NEGATIVE 986 310 261 53 4 smit:SMT_698|3end_uracil_permease_609769..609919_POSITIVE 964 320 271 59 10 smit:SMT_1964|3end_sodium/hydrogen_exchanger_family_protein_1896596..1896746_NEGATIVE 935 320 271 64 15 smit:SMT_915|3end_sucrose_operon_repressor_868619..868769_POSITIVE 934 309 261 52 4 smit:SMT_890|3end_K02029_polar_amino_acid_transport_system_permease_protein_837692..837842_POSITIVE 906 320 271 59 10 smit:SMT_1536|3end_trigger_factor_1520636..1520786_NEGATIVE 900 330 281 50 1 smit:SMT_1671|3end_hypothetical_protein_1659392..1659542_NEGATIVE 867 330 281 55 6 smit:SMT_1487|3end_hypothetical_protein_1467076..1467226_POSITIVE 841 320 271 56 7 smit:SMT_1766|3end_sucrose-6-phosphate_hydrolase_1743101..1743251_POSITIVE 724 340 294 47 1 smit:SMT_442|3end_transcriptional_regulator,_putative_382400..382550_POSITIVE 714 288 244 109 66 smit:SMT_149|3end_hypothetical_protein_predicted_by_Glimmer/Critica_98785..98935_POSITIVE 617 340 300 83 43 smit:SMT_913|3end_putative_sucrose-specific_PTS_permease,_enzyme_II_863923..864073_NEGATIVE 551 340 298 57 17 smit:SMT_1815|3end_K02035_peptide/nickel_transport_system_substrate-binding_protein_1788899..1789049_NEGATIVE 537 340 301 39 1 smit:SMT_1872|3end_K03217_preprotein_translocase_YidC_subunit_1830883..1831033_NEGATIVE 509 340 300 83 44 smit:SMT_678|3end_K04096_DNA_processing_protein_587447..587597_NEGATIVE